CmaCh12G007730.1 (mRNA) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh12G007730.1
Type	mRNA
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	Maturase
Location	Cma_Chr12: 5145266 .. 5157420 (-)
Sequence length	789
RNA-Seq Expression	CmaCh12G007730.1
Synteny	CmaCh12G007730.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AGTTCAATGCTAAGCTTGGGGATTGGGGTCTGTCAGAAATTTAGTCACACTGTTCGAATACAAGAGAAGTTACTATACCGGCAGGCAGGAACAATGGGATATCCTGCACCTGAGTATCTTTATTCGGGTATTCCCACTGAGAAGACAGATGTTTACAACTTTGGTGTAGTAGTGGTAGAGGTGGCAACGGGTAGAAGGCCTCTTGATTATAATGGAATTGTGGTTGTTAACTGGGTATGGTACCTGTGGAAAAAGGGGAAACTAATTGAGGTGATTTGTGTTGATGGGGAAGTTTGAAGGGGTGGAAATGGAAAGGATGCTGATGATGGGACTTTCTTGTGTGCACCCAGACAAAAAAGGTGAGCGCCGGTGAAGGAAGCTGCAAGGATGATTAGAGATAGAAGCACCACTATTGCCGGTGAGTAAACCAAGAGTGGGCATTTAACCTCTTTTACCTGTGAATCTGAAGAAGTAGTGAATCTCGGTGGAGATCGTCCCAGTCTTGATGATGCACTGTATATGACCCAACCCAATTTATCTAAGACTTGCTCAGGAAAGGCCACACACATTAACATTACTTCAAATGGTTTTCAGTATGGGGTCTTTGTTGCAGTTAGTATCAGACATGGTTGAAGCTTGTTAACCAAGACCAATCTTCCATTTTTTATATCGGTGGAATTACACCTTTCAACAAACCTCAATGAAGAAGTTGTGTTTCCTTTAATATAGTTTTTGATAACTATTCCTCTATAATGCCCAAAAATGAAGAGGAGATTGCTCTTATCATTCATTATCATTTTGACTGTTATGCACTTATTTCTGCTTCTTTACTTGTTGTATCATTTTTATACAGTCTCCTTATTGTTAAGACTCTTTTTGATGAATAGTGTGAAACTGTATTAACGCTCACACCCCTACTAGTGCCTGAGCCCTTGGGGTGGAGTTGAGCTAGCCAGATATAGTCTTTTCAGTTCCTTTCTGATAAACCTGACTACTCATAACGAAAAAGATCTCGATTTATTTATAGACAGATATCGTGTATACTGATTGACCAGATGCGACCGATACTAGTTGACAGATGACAGACAGAAGAGCGGGAAGTAGCATATCTTTCAAGAAAGAAAATGATGTTTGTTACTTACAAGCAAGGTATTCGCCCCCCCTTGAATAAAAGAAGGGAAGCAGTATTGATTGTATTGACGGATTGAGGAGTCATGCTTTACCAATTTCCAATAGAGTTGATCCTGTGTAATTTGAGCATAAAAAGTTGATCTTTCTTTAGCACCTCTTTAGCACCTAGTCATGCATGCTGGCTAACCGAAGCACCTGTACTTCAACCGATTAACCAAGCACGGGAGATATTCGCTAAAAAGATAACCGAGATATTAAATGAATAAAAGGAAGGGTCGTAGACAGATGAGCCTTTGCGACCGTTTACAAGAGTGAATGCCGAAAGAAAGAGACAATTCTAGATGCCCTCAGACAGATGCCACTAAACAAGTAAAGGAGAACGGACAGTTTTCGTGGATCGGGAAGACCAACTCTCATTCAAGGAAGCAGACCGTTGACGACAGCAGGCCAGGAAGGACAAAGACTACTAAAAAAGGAAGTTTGCCTTAGAGACCCATGAAATGGAAGTTTGATTAGACAAAAGGTCTTTGAAGACCTCTTCAGCTTCCACGCTTATTATTGCTATCACCTCAACTTAGACATGCTTACTTAGAATGAAGATAAATAATGAAACACAAGACCCTTACACAGGCCAGAGAGAGAGCCTTCGCTTACCTGCTTAACCGTGGCCTCCTATCGTATCTATATCCCCTTTCTTTCCTTCATTTGTTAGATAAAACCTGAGTTTTACCGTTTTTTTTTATTCACACGATTTCAGAAAATCGTGAGTTTGACCATTTGACAAATCACGTCGAATGGATCACCAGAGTTTTAGAAGGGAGTGGCACAGATTTAGTTGGCCACTCTCCAGCCAATTTTAGAATCCTTTTTACTTTTAAATAGGAGATTTGGTCAGAAAATAAAACAACCTGAACGCAGTCAAATTCAGAAGATCGGTGTATATCATTGCAGAGGAGCCAACCTATCAACAAACAAGTTGAATAGCTCAAGTGGTTAGAGCGTTGACCTAACATCACAAAGGTCTCAGGTTCGAGCAGAAGAAAATGCAAAGTGTAAAAACACACACATCGTGGGGCCCATCTCGGGCAGGCTCACTCACTCCTCCACGCCGTCGTCGTGTGCCGACATCTCCATCACCGCCGCCACGAAGAGGGCGTCAAAGTTATCGTTGAGCGAGTGATCAGGGAGACAACGACTGCCGTCGTTCAGTATATCCAATATTGACAAAGTCCAATTATAACGAATGGATCTTGTTGATGCGCGTCAACCTACAGGCGCAAGGGTTATGGCATGCTGTTGAGCCAGAGGAAGGAGAAACGATTGAGTACCGTGAGGATCGGTTGGCGTTTGCCGCCAAATTACGATCTGTGCCCCCAGAGATGCTGGCATCTCTCTCCACCAAGCGCACTGCGCAATCGGCCTGGGAGGGAATCAAATCCCGTCGGGTCGGTGTACAGCGAGTGCGGGAATCCAACATCGAGTAGTTGTGGAAGGAGCTCTCGGAGATCCACTTTAAGGACGGTGAATCCGTCGATGATTTTTCAATGCGGATCACGGGGCTCGCCAACAACATCACCACACTCGGTGGCAGCATCAGCGAGACAGAAATCGTGAAGAAGATGCTGCAGGTTGTCCCTGATCACCTCGAGCAAGTTGCGATTTCAATCGAGACATTGCTTGACGTGAACGACCTAACGGTAGAAGAGGTGACCGGAAGACTGCGTAACGTCGAGCAGCGGAAGAAAAATACCATTTCAGCTGTCGACAAGGGGGGTCGCCTACTCCTCACTGAGGAGGAATGGCTTGCACGTCTAAAGCTCCGTGATAACACCGGCCAGAGCAACGGGTCCTCCTCCAGCCGCAAAGACGGTAAGAAGCCATGGATCTCCCACGGGCGCATGCGCGGGAAAGATGGGAATCAAAAGAAGGAAAAATACCATTTCAGCTGTCGACAAGGGGGGTCGCCTACTCCTCACTGAGGAGGAATGGCTTGCACGTCTAAAGCTCCGTGATAACACCGGCCAGAGCAACGGGTCCTCCTCCAGCCGCAAAGACGGTAAGAAGCCATGGATCTCCCACGGGCGCATGCGCGGGAAAGATGGGAATCAAAAGAAGGAGTCGACCAATGGCAGGCCAATCTGCTCGAACTGTGGGAAGAGAGGACACCTAAGCAGGAACTGCTGGAGCAAGCTTAGGAACAAGGAGAAGGCCGAAAAGGCCCATGTGGCTCAATCCGAGGAGGACGAGCCAGCTCTCTTCATGGTAAGTGCATGTGTCCCCACTCTCGATTCCAAATCCACGGAAATGGAGGTAATCAACAACGATGTTGAACTCGAGAAAGAGCTCCAGCTGGGTGTAGCAAAGGTGGCACCAGCTAGGGAGCCAATTCAACTGGAGGAGGAGCGAGTGTTCGCTCAGATCAGCGAGCGGGACGAGCAACACAAGGACCGGCGATGGATCCTAGACACAGGGGCAACAAACCATATGACCGGGGCTAGATCTGCATTCTCCGAACTTGACTCGGGGATCCGCGGGACGGTGAAATTCGGCGACGAATCCGTCGTAGAGATCGAAGGACGCGGCACCATCCTGTTCGCCAGCAAGGGAGGCGAGCATCGCAAGCTGACCGACGTCTACTTCATCCCGAGGCTCAAGGCTAACCTTGTGAGCCTGGGTCAACTCGATGAGACAGGCTGTTTCATCTCCATCGAGCGCGGACTACTCAAAATTTGCGATAATCAACGACGGCTGCTCACACAGGCAAGGCGCACGACAAACCGTCTTTACATCCTGGAGTTAGAGATAGAGCAACCTGTCAATCTCTCGGCCAAGATCGAAGAGGTATCTTGGAGGTGGCACGCAAGGTACGGGCATTTAAACTTTCCTGCTCTAGAAAAACTACAGAAGGAGGAGTTAGTGCACGGTTTGCCAGCAATCAAAGGTGTGAACAAGCTGTGCGACGGGTGCCTCATCGGCAAACAGAGGCGCACACCCTTTCCGTCTCGAACATCCTATCGAGCCGATGAGCCGTTGGAGCTTGTACACGGCGATATCTGCGGGCCCATCAAGCCGGCGACCCCAGGCGGTAAGAGTTTCTTCCTCCTATTAGTCGATGACAAAAGCCGCTTCATGTGGCTGACCCTGCTGCAAGCGAAAAGTGAGGCGGCAGAGGCGGTTAAGTGCATTAAAGCGCGAGCGGAGGCCGAATGTGAGAAGAAGATGCGAGTGCTGCGCACAGACCGAGGCGGAGAATTCACCTCGACAAGTTTCGGTAAGTACTGTGACGAAATCGGCATACAACGGCACCTAACGGCGCCCTACTCCCCCCAACAGAACGGAGTGGTGGAGCGCCGGAATCAGACCATCGTCGGGACAGCAAGGTCATTGTTGGTGACGGCCGGGATGCCTGGGAGATTCTGGGGAGAGGCAGTAATGACGGCCGTATATCTCCTCAATCGGTCACCAACCCGAAGCCTTGACGGGAAGACACCATATGAGGTCTGGTACAACAAAAAACCAGCGGTACATCATTTTCGCGTGTTCGGCTGCGTCGCTTACATGAAGGTAACACGTCCCCACCTCGCCAAGCTCGATCCTAGGGGGCTGAAGGTCGTTTTTATCGGCTATGAACCCGGGAGCAAGGCGTACAGACTATATGATCCTGTAGGGGGGCGAGCTCACGTGTCTCGCGACGTCGTCTTCGATGAAAGCACCTTCTGGCAGTGGAATGACGTGATCGAGGCAGACCATAATCCAAATCAATTCACGGTGGAGTACCTCGTCACTGAGCCGGAAGAAGGAGGAGCCCAGCATCAGCAGCCGTCACCGCCGCCAGCAGGTGCAACCCCTGAACCAGTGGAATTCGCAACACCACGGACTGTGGATTCGACGCTGGATGCCGATCACGATACTGATCTGGTGGCCAGGTACCGGAGGATGGACGACCTAGTAGGAGGAGGTGAACCACCTGGACTGGCAGTGCGCGAGCTCGAAGAAGTGGCCGAACTACATGCCATCAGTGCAGATGAACCGAACACCTTCGCCGAAGCAGAAAAGAACCCGTGCTGGCTGAAGGCAATGCAGGAGGAGATGACATCCATCACCGAAAATCAGACGTGGAGTCTGGAGGATATGCCGCCGGGACACCAAGCCATAGGGCTCAAATGGGTCTTCAAACTAAAGCGCAACGAAAAAGGAGAAGTTGTGAAACACAAGGCCCGTCTGGTAGCGAAGGGCTACGTCCAGAAGCAAGGAGTGGACTTCGAAGAGGTATTTGCGCCAGTGGCAAGGTTAGAATCCGTTCGTTTCTTACTTGCAATTGCAGCACATTACTCTTGGGAGGTTCACCATATGGACGTAAAGTCTGCTTTCCTTAACGGAGAGCTGAAGGAGACTGTTTATGTCCGACAGCCACCTGGCTTCTTGGATAACAACAATCCCAATAAAGTATTGCGCCTGCACAAGGCACTCTACGGGCTTCGACAAGCTCCACGAGCCTGGAACGCGAAGCTCGACAGTACCTTACTGTCACTGAAATTCAAACGTTGCGCCTCTGAGCATGGCATGTACACGCACGGCCATGACAAGAAGCGACTAATCGTGGGAGTGTACGTCGACGACCTCATAATCACTGGAGGTGACATGGAAGTCCTCGGAAGGTTCAAGAAGGAGATGTCGAAAAACTTCGAGATGAGCGATCTCGGCGTGCTCAGCTACTATCTCGGCATCGAAGTGCAACAGAATTCTACCGGCATCTCCATCTGCCAAAGTGCATACGCAAAGAAGCTGCTGGACACAACTGGACTTGTGGACAGTAATCCTACAAGGACGCCAATGGAGGCCCGACTCCAACTAAGGAAGGCTGGCACTACGACGACAGTCGACTCCACCAATTACCGCAGCATTGTCGGGAGTCTACGCTATCTGGTAAACTCTCGTCCTGATCTTGCTTATTCTGTTGGATATGTGAGCCGGTTTATGGAAGCACCTAGGGAGGAGCATTTAGCGGCTGTCAAGCGCATCCTGCGCTATGTAGCCGGAACCAGAGGCTGGTGTGTAAGATACTGCGCAGGGAGCGGAAAGGAGAAACTCAAGCTAGTTGGCTACAGTGATAGTGACATGGCCGGTGACGTTGATGATCGTAAGAGCACTAGCGGAATGATCTACTTTCTCTCAGGCGGCGCAATCTGCTGGCAATCAACAAAACAGAAGGTAGTTGCTTTGTCTTCCTGTGAAGCAGAATACATCGCCGCTTCGATGGCAGCAACACAAGGGATCTGGCTTGCGCGACTAATGGAAGAACTCATCGGGAGAGAAAGTGATCCACCAATGCTATACGTAGACAACAAAGCTACGATCTCCCTGATCAAAAATCCAGTTTTGCATGAACGAAGCAAGCACATAGAAATCAGGTTCCACTACATTCGAGAATGTGCAGATCGAGGGCTCATCAAAATTGATTACATCCGAACAGAGGAACAACTTGGAGACATCTTCACCAAGTCCCTGGCGCGGGTGAAATTTGAAGAACTACGCTCAAAGATCGGAGTTCAAATAGTAAGGTAGATATACTACAGGTTTTAGGAGGAGATTGTTAGATAAAACCTGAGTTTTACCGTTTTTTTTTATTCACACGATTTCAGAAAATCGTGAGTTTGACCATTTGACAAATCACGTCGAATGGATCACCAGAGTTTTAGAAGGGAGTGGCACAGATTTAGTTGGCCACTCTCCAGCCAATTTTAGAATCCTTTTTACTTTTAAATAGGAGATTTGGTCAGAAAATAAAACAACCTGAACGCAGTCAAATTCAGAGTTATTTTTTCTCTCTCCTTTTTGTTACGCATTTTCCCATTTTCCTCTCACCGAAATTCTGTGAAAACCAACATCAGTTACATCGAGTTTCAGTTCCGCTTCCAACTACCGATGGGAGAAGGCTTTGGACGTATAGCAAGAAAGAATCTGAGGTATGGCATACGAGATATATGAAATGAAAGGCTGGAAACAGAGCTGGAGATGAGCGCTAGCCAATGGTTAATACTGAAGAAAGCACCTTAGCAATTACCAGTAATGCCCCTATCGACCTCAGTCTTGTTTTTTGCTAACTTGAGTAACGAACACTGTCTCATTAAAGGCCGAATATCCATATATATCTTTATGGAAGAGAGTCGGCCCACTTTTAGCCGTTCCAGCAATTATGCCCGTTTTAGCCCTACCGTCCACCCCTATATAATGGAAAGGGGTACTTTTAAGAGCTGATGTGTAACAGATCAAAGCGACCGTTAGTCAGGCTGATCTGTGATTGGTCAAGGCGAGCGAGAGGACACATACCTCCTCCATATTCCTTAAATGGGCAAGACTCGGATACTGCATGCGAGAAGTATAAGAGTTTACAGTTCAATGAAAGAAGAAATAGGTTCAAGAAGGGAATGAGAAAGAATCAATAGGTGAAAGAATAAATGGGTTTCGGTTCCGTAGCTTGACCTTCTATTCGGACGCTTGACTTACCTTGTTCAAGAGTGAAAGAAGGAAAGGAATAAGTAGGTTTAGTAGTGATTGAGCTCAGCAGTGAGACCGACAGGTTCAGGATTGAATGAATAAGGTAAATAGGGTCAGGTCATAGAGGTTCCGATTTAGGAGAGAAGTCGAGGTTCAGGAAAGAGCTACTTTTCTTTTCTTTTACCTCCTTCAATCCAGGTCAAAGACTCAAAGTCAAAAGTAGGGATCCGAGAAAACAAGACCCCTACGTCTTTCTTGTAAACTAATTATTCGATCTGTAGATCCCAGCAAGGCTGGCACATCACTAAACCACCCAGGGATGTCTCTTGCAAAGAAGAATTCGTAGAGATTTTTCCAGAACCCCAGTCCAGCCTACTCAACTGATATAATCTAGAATCCACTCTCTACCTTTACTTAACTTAGTAGTAGGCGAATAGTGACCCTATTTGTATGCGCATTCACAGGGCACGTTTCAAGATCTCCCGCAACGAGAACCTAAGACATGGTGGATTGATAGTAAGCTGAAAGAATAAATGGATCAATCATAGGTTGGTTGAATATTGAGTGTAGCTTAGGCTACGTCTTCTGTTCACGTGCTACTAAGCCGGCACACAGGATCTTAGACGGGTTTTGTCCCCTTTCGGGAACACCTTCTTACTAGCTAGTACGGTAAAAGCCTGATGCAAATAGACCAAAAAAAGAAGAGTTCTCTATAGATGAGTTGTAGTCGATTCGCCCGTTATGGCTCGTCTCGCGCTTAGTCACTCGCTGGATTCGGATAGGGGGAAGTCTTTTCTGAAAAAACTCGCAGTTCTACCCCTAATATATATGATTGATTTTTTAGATACTAACTCTTTGGTTGGATCGAACAGGGAACTTCTATAAAGATCTTTCCACTCATTCGTCATACTCAAAGTTGAAGTCACGGCCGGCATGGGGGGATCGGAAAAAGAACGAGAATCGGTGTCGTGGTGGTATTACGAGATAGCGATTTCTTGTAGTATAGAAGAATAGATCCGCATACCTATTGATTGACCATAGATGCGACCGCTATCTAAGAGAATCGAAGTAGTTCTTCTATCGTTCAAGGGCAAGGGGAAAAGATGTAGCGGCTTGCCTAGATCTCGTATTTCCCACGTAGTCCGTCGGTCAAACCAAGGATTCTCTGATCAAAGTAATATAGAGATTCTTTTTCTTTTTCTGGTATGTAGGCGAGCTAGGAGCGCATCAATCGGGTCGAAAACTCAGATAGAATCATCATCATGGCCCTTTTCTTCTTTCTTTTGTTTGTGTCCAACTTTATTAGTGAAAAGAGGTGTGTGTGTTTTTTTAAGGCTTATCCGGGGGCTGCTGCTCTGGGGCATCCAATTCCTCTTCTTTCTTTTCCTGAGGATCTCACATCGAGAGCTGCTTCTTCTTGTTCAGGGTCAGATCTTCCTCAGATTCCGAGAAATCGGTCAGGGGGCTACCCTCTTCTCATCTCACAATTCCATTGCCTCTCCTCACCTCTCGAGATATATATATATATAAACTCTTCCCCAGAGGATAGTGGAAGCTCCAGGATGAGTATGTCCTGCCTGGATTCCCGAATTCATTCTCGTCCTGATCCACCGTGGAATTTTCTCAATCTACAAAAAACAATGATGGAGAGGAAAGGAAAGATAAAAGATTATGGACCGGAGAGGAACGAAGCTGCTTTACCGATAGGGAGAGGGCTCGTAATGATCTTCTCAAAGATCACAAGGTGCTGGGGTGGATCCATAGGTTTTTGTGAAAGGGATGCCCCGTATCTGAGATGTGGCTTGCTGAAAAGAAAAAGTGAATTCCTCTATTTGATGTCGATTCATTTACACTTCCATTCTTTGTAGAGGAAGGGTAACTGCTTGCTGGCTGGGAGCTGTATGAGCAGTAACGTCCACGTATGGCTCTGTGAGAAGGGCGGTGGACAAAAATGGCCTTGTTGTACCTCACTCTCGTCTTCAATGGGGTCTGCTCTTTTTTTTTTTTTTGGGAGAGTATGGCAATATGATCTTAATGAGGTGCGGGGGTTTGCATCTGAGATTTGTTGGGCTTCCCTCTTCTAGGGCCTGCGTCCAGGGGTTTTTGTGCAATAAATCCCTCTGGCCGAAGACTAGTGGTAGGTGGTCCCGTGGAACTTTTGAAGAAGGGTAGCCTAGTGTGTAAGCACAACAATGAACCGTGGCGAACCCTCAGACGACCTATCTAAGATTAGGGGGGAGATCCTAAGTAGTGGTGCCCCTTTCACTCTTCCACGGACTGATACATGTACCGAATGCTCATACGGGAAAGTTGACTCCAGGGTCTGGAACTTGGGGGGTTGCTCTGAGAAATCTCCTTTCTTTCTCGTCCACTCAGGGGGGTGCGGACACACCTGCGCGGATTACAGGTGACGGTTACAAGAATGGCGGGGAAGTGAACAGTACCCGATGAGATTCAGAAATGGATGTAGACCCATCGGGCAGGGATAATCATTCTAGTCCTAGAAGAGGTGGCGACCATTCTCAAGAACCAAAAAGACTGAGCTGAGGGAAGCCCTATGAGTCACTGAAATGACAGAGGGTCCTTGATCTATCAATAGAGGAAGCAAAATAGGGGCTTTGCTCCCCTTTACAATATGAAGAAAGAAAGAAGGGTCGAAGTTTAGACCGTTCACACTAGTTCGACCTATAGAAAAGATCATGAAAGAGGCGATCAGAATGGTACTCGAATCCATTTACGATCCCGAGTTTCCAGACACATCGCACTTCCATTCGGGGTAAGGCCGCCACTCGGCCTTAAGACGGATCAAAGAAGAGTGGGGAACCTCTCACTGGTTTTTGGAATTCGACATCAGGAAGTGTTTTCACACCATCGACCGACATCGACTCATCTCAATCTTAAAGGAAGAGATCGACGATCCCAAGTTCTTTTACTCCATTCAACAAGTCTTTTCCGGCGGACGACTCATAGGAGGTGAGAAGGGCCCTGACTACTCCGTCCCACACAGTGTACTACTATCGGCCCTACCAGGCAACATCTACCTACACAAGCTCGATCAGGAGATAGGAAGGATCCAACAGAAGTACGAAATTCCTATTGTTCAGAGAATCAGATCGGTTCTATTAAGGACTGGTCGTATTGATGACCAATCAAACTCTGGAGAAGAAGCAAGCTTCAACCCTCCCCAAGACTACAGAGCCCTCATTATGGGGAGAGTAAAGAGCTTCCAACGCAAAGTGGCCTTTCATTCCCTTGTTTCGTAGTGGCACACCCCACACACAAGCACCACACGGCTTAGGGGGGACCAGAAAATGCCTTTCGATTTACCACCGGCCGTTGCTGCCTTCCTTAACAAGCCCTTGAGCCTCCTTTGCGCCGCCTTCCTCATAGAAGCCACCGGGTTGACCCCTCAGGCCGAATTCTATGGTCGAGAACGCTGTAATAAGAAATTGGCCATGAGAGAACCTTTACAGTATTGCAAAAGAAAAGGCCTGCTGATAGAGCTGGGCGGGGAGTTGAGACTAGTTATCAGGTCAGAGAGACGCCTGGACCGTAAGCTGGGCCCCTTAAAACCCCATTACTTAATAAGGATTTGTTACGCGCAATATGCCGACGACTTACTACTGGGAATCGTGGGTGCCGTAGAGCTTCTCATAGAAATACAAAAACGTATCGCCCACTTCCTACAATCTGGTCTGAACCTTTAGGTAGGCTTTACAGGAACAACAACAATAGCTGCACGGAGTACGGTAGAATTCCCTGGTACCGTCATTCGGGAAGTCCCTCCGAGGACGACTCCCATACAATTCTTGCGAGAGCTAGAGAAGCGTCTACGGGTAAAGCACCGTATCCATATAACTGCTTGCCATCTAAGCTCTGCCATCCATTCAAACTTGACGAACCTAGGTAATAGTATCCCGAGAAAAGAGCTGACGAAGGGGATGAGCCAAATAGGGAGTCTACTGAACGGGGTTCAACTAGTGGAGACTCTTGGAACAGCTAGACTAATCCGTCCCCAAGTGAGCGTATTATGGGGGACTGTCAATCACATCCGGCAAAGATCAAGGGGGATCTCGTTGTTGCATAGCTCAGGTCAGAGCAAGGCGCCATCGGATGTTCAACAGGCAGTTTCACGATCGAGCATGAGTGCTGGGAAGTTGTCATTGTATACTCCTACGGGTCGGAAGGCGGCGGGGGAAAGAGGAGGACACTTGGGGAGATCTATCAGCAGCGAATTCCCCATACATCTCGAGTCACCTATCAAAAAGATACTTCGAAGGCTTCGAGATCGAGGTCTCATTAGCCGAAGAAGACCCTGGCCAATCCACGTGGCCTGCTTGACGAACGTCAGCGACGGAGACATCGTAAATTGGTCTGCGGGCATCGCAATCAGTCTTCTGTCCTACTACAGGTGTTGCGACAACCTTTACCAAGTCCAAACGATTGTCGACCACCAAAGCGCAGAATATAATCCCAAAGTACTCCAAAGACCCAAATATAGTCAATCAAGAAGGGTGTCAGACTGA

mRNA sequence

AGTTCAATGCTAAGCTTGGGGATTGGGGTCTGTCAGAAATTTAGTCACACTGTTCGAATACAAGAGAAGTTACTATACCGGCAGGCAGGAACAATGGGATATCCTGCACCTGAGTATCTTTATTCGGGTATTCCCACTGAGAAGACAGATGTTTACAACTTTGGTGTAGTAGTGGTAGAGGTGGCAACGGGGTCAGATCTTCCTCAGATTCCGAGAAATCGGTCAGGGGGCTACCCTCTTCTCATCTCACAATTCCATTGCCTCTCCTCACCTCTCGAGATATATATATATATAAACTCTTCCCCAGAGGATAGTGGAAGCTCCAGGATGAGTATGTCCTGCCTGGATTCCCGAATTCATTCTCGTCCTGATCCACCGTGGAATTTTCTCAATCTACAAAAAACAATGATGGAGAGGAAAGGAAAGATAAAAGATTATGGACCGGAGAGGAACGAAGCTGCTTTACCGATAGGGAGAGGGCTCGTAATGATCTTCTCAAAGATCACAAGACACATCGCACTTCCATTCGGGGTAAGGCCGCCACTCGGCCTTAAGACGGATCAAAGAAGAGTGGGGAACCTCTCACTGGTTTTTGGAATTCGACATCAGGAAGTCGACGGAGACATCGTAAATTGGTCTGCGGGCATCGCAATCAGTCTTCTGTCCTACTACAGGTGTTGCGACAACCTTTACCAAGTCCAAACGATTGTCGACCACCAAAGCGCAGAATATAATCCCAAAGTACTCCAAAGACCCAAATATAGTCAATCAAGAAGGGTGTCAGACTGA

Coding sequence (CDS)

AGTTCAATGCTAAGCTTGGGGATTGGGGTCTGTCAGAAATTTAGTCACACTGTTCGAATACAAGAGAAGTTACTATACCGGCAGGCAGGAACAATGGGATATCCTGCACCTGAGTATCTTTATTCGGGTATTCCCACTGAGAAGACAGATGTTTACAACTTTGGTGTAGTAGTGGTAGAGGTGGCAACGGGGTCAGATCTTCCTCAGATTCCGAGAAATCGGTCAGGGGGCTACCCTCTTCTCATCTCACAATTCCATTGCCTCTCCTCACCTCTCGAGATATATATATATATAAACTCTTCCCCAGAGGATAGTGGAAGCTCCAGGATGAGTATGTCCTGCCTGGATTCCCGAATTCATTCTCGTCCTGATCCACCGTGGAATTTTCTCAATCTACAAAAAACAATGATGGAGAGGAAAGGAAAGATAAAAGATTATGGACCGGAGAGGAACGAAGCTGCTTTACCGATAGGGAGAGGGCTCGTAATGATCTTCTCAAAGATCACAAGACACATCGCACTTCCATTCGGGGTAAGGCCGCCACTCGGCCTTAAGACGGATCAAAGAAGAGTGGGGAACCTCTCACTGGTTTTTGGAATTCGACATCAGGAAGTCGACGGAGACATCGTAAATTGGTCTGCGGGCATCGCAATCAGTCTTCTGTCCTACTACAGGTGTTGCGACAACCTTTACCAAGTCCAAACGATTGTCGACCACCAAAGCGCAGAATATAATCCCAAAGTACTCCAAAGACCCAAATATAGTCAATCAAGAAGGGTGTCAGACTGA

Protein sequence

SSMLSLGIGVCQKFSHTVRIQEKLLYRQAGTMGYPAPEYLYSGIPTEKTDVYNFGVVVVEVATGSDLPQIPRNRSGGYPLLISQFHCLSSPLEIYIYINSSPEDSGSSRMSMSCLDSRIHSRPDPPWNFLNLQKTMMERKGKIKDYGPERNEAALPIGRGLVMIFSKITRHIALPFGVRPPLGLKTDQRRVGNLSLVFGIRHQEVDGDIVNWSAGIAISLLSYYRCCDNLYQVQTIVDHQSAEYNPKVLQRPKYSQSRRVSD

Homology

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BLAST of CmaCh12G007730.1 vs. ExPASy Swiss-Prot
Match: Q9FHX3 (L-type lectin-domain containing receptor kinase S.6 OS=Arabidopsis thaliana OX=3702 GN=LECRKS6 PE=2 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 3.2e-11
Identity = 30/56 (53.57%), Postives = 42/56 (75.00%), Query Frame = 0


Query: 9   GVCQKFSHTVRIQEKLLYRQAGTMGYPAPEYLYSGIPTEKTDVYNFGVVVVEVATG 65
           G+ + + H+  +  +     AGTMGY APEY+Y+G+P+EKTDVY+FGVVV+EV TG
Sbjct: 520 GLAEIYEHSALLAGRAATLPAGTMGYLAPEYVYTGVPSEKTDVYSFGVVVLEVCTG 575

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BLAST of CmaCh12G007730.1 vs. ExPASy Swiss-Prot
Match: Q9M092 (Wall-associated receptor kinase-like 17 OS=Arabidopsis thaliana OX=3702 GN=WAKL17 PE=3 SV=2)

HSP 1 Score: 58.9 bits (141), Expect = 9.8e-08
Identity = 40/113 (35.40%), Postives = 58/113 (51.33%), Query Frame = 0


Query: 29  AGTMGYPAPEYLYSGIPTEKTDVYNFGVVVVEVATGSDLPQIPRNRSGGYPLLISQFHC- 88
           +GT+GY  PEY  S   TEK+DVY+FGV++ E+ TG D P I    +     L   F   
Sbjct: 607 SGTVGYVDPEYYRSSQYTEKSDVYSFGVILAELITG-DKPVIMVQNTQEIIALAEHFRVA 666

Query: 89  -----LSSPLEIYIYINSSPED-SGSSRMSMSCLDSRIHSRPDPPWNFLNLQK 135
                LS  ++  I  +S PE     + ++M CL SR  +RP+    F  L++
Sbjct: 667 MKERRLSDIMDARIRDDSKPEQVMAVANLAMKCLSSRGRNRPNMREVFTELER 718

[Close]

BLAST of CmaCh12G007730.1 vs. ExPASy Swiss-Prot
Match: O64771 (G-type lectin S-receptor-like serine/threonine-protein kinase At1g61480 OS=Arabidopsis thaliana OX=3702 GN=At1g61480 PE=2 SV=2)

HSP 1 Score: 58.9 bits (141), Expect = 9.8e-08
Identity = 23/50 (46.00%), Postives = 37/50 (74.00%), Query Frame = 0


Query: 27  RQAGTMGYPAPEYLYSGIPTEKTDVYNFGVVVVEVATGSDLPQIPRNRSG 77
           R AGT+GY APEY ++G+ +EK+D+Y+FGV+++E+ TG  + +    R G
Sbjct: 657 RVAGTLGYMAPEYAWTGMFSEKSDIYSFGVILLEIITGEKISRFSYGRQG 706

[Close]

BLAST of CmaCh12G007730.1 vs. ExPASy Swiss-Prot
Match: A0A0P0VIP0 (L-type lectin-domain containing receptor kinase S.7 OS=Oryza sativa subsp. japonica OX=39947 GN=LECRKS7 PE=1 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 2.2e-07
Identity = 24/41 (58.54%), Postives = 35/41 (85.37%), Query Frame = 0


Query: 24  LLYRQAGTMGYPAPEYLYSGIPTEKTDVYNFGVVVVEVATG 65
           L  + AGT+GY APEY+++G+ TE++DVY+FGV+ +EVATG
Sbjct: 546 LTTQPAGTLGYLAPEYVHTGVATERSDVYSFGVLALEVATG 586

[Close]

BLAST of CmaCh12G007730.1 vs. ExPASy Swiss-Prot
Match: P93308 (Uncharacterized mitochondrial protein AtMg00530 OS=Arabidopsis thaliana OX=3702 GN=AtMg00530 PE=4 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 2.2e-07
Identity = 43/106 (40.57%), Postives = 51/106 (48.11%), Query Frame = 0


Query: 66  DLPQIPRNRSGGYPLLISQFHCLSSPLEIYIYINSSPEDSGSSRMSMS-CLDSRIHSRPD 125
           DL   PRNRS G   L S F  + +P   ++ I+      G  ++     LDSRIHSRPD
Sbjct: 27  DLLPTPRNRSNG--RLPSPFSRVINP-STHLSIHKKALPRGERKLQDEYALDSRIHSRPD 86

Query: 126 PPWNFLNLQKTMMERKGKIKDYGPERNEAALPIGRGLVMIFSKITR 171
           P WNF NLQK                        +GLVMIFSKITR
Sbjct: 87  PLWNFRNLQKHSR---------------------KGLVMIFSKITR 108

[Close]

BLAST of CmaCh12G007730.1 vs. TAIR 10
Match: AT5G42120.1 (Concanavalin A-like lectin protein kinase family protein )

HSP 1 Score: 70.5 bits (171), Expect = 2.3e-12
Identity = 30/56 (53.57%), Postives = 42/56 (75.00%), Query Frame = 0


Query: 9   GVCQKFSHTVRIQEKLLYRQAGTMGYPAPEYLYSGIPTEKTDVYNFGVVVVEVATG 65
           G+ + + H+  +  +     AGTMGY APEY+Y+G+P+EKTDVY+FGVVV+EV TG
Sbjct: 520 GLAEIYEHSALLAGRAATLPAGTMGYLAPEYVYTGVPSEKTDVYSFGVVVLEVCTG 575

[Close]

BLAST of CmaCh12G007730.1 vs. TAIR 10
Match: ATMG00520.1 (Intron maturase, type II family protein )

HSP 1 Score: 66.6 bits (161), Expect = 3.3e-11
Identity = 31/35 (88.57%), Postives = 32/35 (91.43%), Query Frame = 0


Query: 206 DGDIVNWSAGIAISLLSYYRCCDNLYQVQTIVDHQ 241
           D DIVNWSAGIAIS LSYYRC DNLYQV+TIVDHQ
Sbjct: 570 DEDIVNWSAGIAISPLSYYRCRDNLYQVRTIVDHQ 604

[Close]

BLAST of CmaCh12G007730.1 vs. TAIR 10
Match: AT1G61480.1 (S-locus lectin protein kinase family protein )

HSP 1 Score: 58.9 bits (141), Expect = 7.0e-09
Identity = 23/50 (46.00%), Postives = 37/50 (74.00%), Query Frame = 0


Query: 27  RQAGTMGYPAPEYLYSGIPTEKTDVYNFGVVVVEVATGSDLPQIPRNRSG 77
           R AGT+GY APEY ++G+ +EK+D+Y+FGV+++E+ TG  + +    R G
Sbjct: 657 RVAGTLGYMAPEYAWTGMFSEKSDIYSFGVILLEIITGEKISRFSYGRQG 706

[Close]

BLAST of CmaCh12G007730.1 vs. TAIR 10
Match: AT4G31100.1 (wall-associated kinase, putative )

HSP 1 Score: 58.9 bits (141), Expect = 7.0e-09
Identity = 40/113 (35.40%), Postives = 58/113 (51.33%), Query Frame = 0


Query: 29  AGTMGYPAPEYLYSGIPTEKTDVYNFGVVVVEVATGSDLPQIPRNRSGGYPLLISQFHC- 88
           +GT+GY  PEY  S   TEK+DVY+FGV++ E+ TG D P I    +     L   F   
Sbjct: 607 SGTVGYVDPEYYRSSQYTEKSDVYSFGVILAELITG-DKPVIMVQNTQEIIALAEHFRVA 666

Query: 89  -----LSSPLEIYIYINSSPED-SGSSRMSMSCLDSRIHSRPDPPWNFLNLQK 135
                LS  ++  I  +S PE     + ++M CL SR  +RP+    F  L++
Sbjct: 667 MKERRLSDIMDARIRDDSKPEQVMAVANLAMKCLSSRGRNRPNMREVFTELER 718

[Close]

BLAST of CmaCh12G007730.1 vs. TAIR 10
Match: AT2G07776.2 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:ATMG00530.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 57.8 bits (138), Expect = 1.5e-08
Identity = 43/106 (40.57%), Postives = 51/106 (48.11%), Query Frame = 0


Query: 66  DLPQIPRNRSGGYPLLISQFHCLSSPLEIYIYINSSPEDSGSSRMSMS-CLDSRIHSRPD 125
           DL   PRNRS G   L S F  + +P   ++ I+      G  ++     LDSRIHSRPD
Sbjct: 27  DLLPTPRNRSNG--RLPSPFSRVINP-STHLSIHKKALPRGERKLQDEYALDSRIHSRPD 86

Query: 126 PPWNFLNLQKTMMERKGKIKDYGPERNEAALPIGRGLVMIFSKITR 171
           P WNF NLQK                        +GLVMIFSKITR
Sbjct: 87  PLWNFRNLQKHSR---------------------KGLVMIFSKITR 108

The following BLAST results are available for this feature:

BLAST of CmaCh12G007730.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FHX3	3.2e-11	53.57	L-type lectin-domain containing receptor kinase S.6 OS=Arabidopsis thaliana OX=3...	[more]
Q9M092	9.8e-08	35.40	Wall-associated receptor kinase-like 17 OS=Arabidopsis thaliana OX=3702 GN=WAKL1...	[more]
O64771	9.8e-08	46.00	G-type lectin S-receptor-like serine/threonine-protein kinase At1g61480 OS=Arabi...	[more]
A0A0P0VIP0	2.2e-07	58.54	L-type lectin-domain containing receptor kinase S.7 OS=Oryza sativa subsp. japon...	[more]
P93308	2.2e-07	40.57	Uncharacterized mitochondrial protein AtMg00530 OS=Arabidopsis thaliana OX=3702 ...	[more]

BLAST of CmaCh12G007730.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G42120.1	2.3e-12	53.57	Concanavalin A-like lectin protein kinase family protein	[more]
ATMG00520.1	3.3e-11	88.57	Intron maturase, type II family protein	[more]
AT1G61480.1	7.0e-09	46.00	S-locus lectin protein kinase family protein	[more]
AT4G31100.1	7.0e-09	35.40	wall-associated kinase, putative	[more]
AT2G07776.2	1.5e-08	40.57	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.10.510.10	Transferase(Phosphotransferase) domain 1	coord: 6..145 e-value: 2.0E-10 score: 42.2
None	No IPR available	PANTHER	PTHR33642:SF5	MATURASE	coord: 206..242
None	No IPR available	PANTHER	PTHR33642	COX1/OXI3 INTRON 1 PROTEIN-RELATED	coord: 206..242
IPR011009	Protein kinase-like domain superfamily	SUPERFAMILY	56112	Protein kinase-like (PK-like)	coord: 23..123

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmaCh12G007730	CmaCh12G007730	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh12G007730.1:exon:634	CmaCh12G007730.1:exon:634	exon
CmaCh12G007730.1:exon:633	CmaCh12G007730.1:exon:633	exon
CmaCh12G007730.1:exon:632	CmaCh12G007730.1:exon:632	exon
CmaCh12G007730.1:exon:631	CmaCh12G007730.1:exon:631	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh12G007730.1:cds	CmaCh12G007730.1:cds_4	CDS
CmaCh12G007730.1:cds	CmaCh12G007730.1:cds_3	CDS
CmaCh12G007730.1:cds	CmaCh12G007730.1:cds_2	CDS
CmaCh12G007730.1:cds	CmaCh12G007730.1:cds	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmaCh12G007730.1	CmaCh12G007730.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006397	mRNA processing
cellular_component	GO:0005739	mitochondrion