CmaCh08G005950.1 (mRNA) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh08G005950.1
Type	mRNA
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	deSI-like protein At4g17486
Location	Cma_Chr08: 3377886 .. 3379971 (+)
Sequence length	1221
RNA-Seq Expression	CmaCh08G005950.1
Synteny	CmaCh08G005950.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTCCAAATCAAGGTCGATGAATACCCTTACAAAACTAGAATCAACCACGGTCCAGATCATATCTAAGGTACTCAACAATGAGTCGCCGCCGGTGATGCCCGTTAGAATTATAACTAAGGAATTAAGAGTTACCATTCTTCTCCATAGATTTTGAAGTTCAAAAATTTCCTCCATAACATCAGGATACAACTCTGTGTTTTTCCTTCTCCAGTTTTTGAGAGTTTTTTTTGTTCTTTGCCATGAATTGAAGTCTGAAGAATGTTGTTGTTTAAGAAACCAGTCGGGAAACAAACCGGAGGATCCGTGCCGGTGTACCTCAATGTGTACGATCTGACCGCGATCAATGGCTACGCTTACTGGTTTGGCCTTGGTGTTTTCCATTCAGGAGTTCAAGGTCAGTAATGGCTGTAATGGCTTCCGTTTGATCTTCGTTTTCGAAGGCGTTTCGTGAGTTTTTCTTTTTCTGTTTTCTCTTAGCTGAAGCTCTTATGATGCTTTGCCGTTTCTTGTGATCTTGCTAATTCGTTGGTGCGGTGCGATGCGATGCGATATACTCCGTTTTCCATGTTTTGTGCTCTGAGGGAGAATGAATCGGAGAGTGTGGAAGATTAGATAATTTTATTGAAACGTGTGCTGTGTGACTCGAGAGATGCATCAGTATAGAAAAATTGTTCTGATTATTCTTACACTTCTTCTTCTTTTTCTTTCTTAATTTTTTTTTATAACGACATCGGCTCATTTATGGTATTTCTGTTCTCGATTATGCATTTTCTGTCAATTAGGCTACTAACTACATCGAACTTCGAACATTTTCCCATTCGGCAGACGAGTAAATTTTCCGACAAGTGGAAACCTCGTTTCTGATTTCTCTTTTATTTCCAGCTTTCCGTTTGAACCAGGTCGTTTTCTTTATTGTATACGATTTCGGTGCCGGTGAAGTTCATACGCTCAATCTGGCAGATCTTTCGGCTGTATTTGCTGAACTCGATTTGATGTTTTTGTATTGCAGTTCATGGTGTGGAATACGCATTTGGAGCTCACGAGTACTCAACAACAGGAATTTTTGAAGGGGTGCCGAAGCAATGCCATGGATTTAGATTTAGAAAGTCAGTTTTGATAGGCAAAACAGATATGAAACCAGCAGAGGTGAGAGCTTTAATGGAGGAACTTGCTCAAATCTACAAAGGAAATGCTTACAATTTAATCACCAAAAATTGCAACCATTTTTGCAACGACGCTTGTGTTAAACTCACAGAAAATTCCATCCCAAATTGGGTTAATCGCCTTGCTAGAATTGGTAAGAAAACACCTCTTTCTTTTTATCCACCTGTGGCTTGCTAGAACTAGAATTTGATTGGAAGTTCATTTAATGGGCTAGCATAATTTTTCTGATGAATACGAACACAATCAGATTAGCATTTGTGAATCTGGAGTTCTTTGGTAGCAAGATGATCTTGTTTGTTCTGGTTAAGTTTCTTGTGAGCTTGCTTGATTCTGTGCTACACCATTTTGGATCAATGTGTGCTGTTTTTTCTTTTCTTTTTCAGGCTTTCTTTGCAATTGTGTTCTACCAGTGACCTTCAATTCCACCAGAATCAGGCACCACCACAGAATTGAACACAAGGTTGTAACCATGGAAACAAAGAAGGATTTAACAAGTCAATCCATCAAAACTCCCAATTCTAATCCCTCTTCTTCTGCAACTTCTTCTCCTTCCTCGACGTTTCGTCGAGGAAGAAGCCGAACAAGACGAGCTCCTCCTCCATCTTCTCCATTGTTTTCTCATTCTTCATCTTCCTGATATATGGACATCACAGCTCCTAGCTATCTTTTCCTTTATGTCTTCTTCCTTGTGATCTTGGAATATCACTCTCAATCAAAAGCATTCACTTATATGCTTTGGATTCCCTTGAAATGTTCTTTTTTTCCCTCTTGTTCTTTTTCCCCTTCTTTCTCTTTCTTTTTGCATTCATCATCTTTGAATACTCCAAAGGAACAATTGCAAGTTGTAAAAGTTGATATTATTGTGAACTTCAAATCCCAATTCATATTTTCATAATCTGAACAAACTGTAGATTTTTTGTTA

mRNA sequence

TTCCAAATCAAGGTCGATGAATACCCTTACAAAACTAGAATCAACCACGGTCCAGATCATATCTAAGGTACTCAACAATGAGTCGCCGCCGGTGATGCCCGTTAGAATTATAACTAAGGAATTAAGAGTTACCATTCTTCTCCATAGATTTTGAAGTTCAAAAATTTCCTCCATAACATCAGGATACAACTCTGTGTTTTTCCTTCTCCAGTTTTTGAGAGTTTTTTTTGTTCTTTGCCATGAATTGAAGTCTGAAGAATGTTGTTGTTTAAGAAACCAGTCGGGAAACAAACCGGAGGATCCGTGCCGGTGTACCTCAATGTGTACGATCTGACCGCGATCAATGGCTACGCTTACTGGTTTGGCCTTGGTGTTTTCCATTCAGGAGTTCAAGTTCATGGTGTGGAATACGCATTTGGAGCTCACGAGTACTCAACAACAGGAATTTTTGAAGGGGTGCCGAAGCAATGCCATGGATTTAGATTTAGAAAGTCAGTTTTGATAGGCAAAACAGATATGAAACCAGCAGAGGTGAGAGCTTTAATGGAGGAACTTGCTCAAATCTACAAAGGAAATGCTTACAATTTAATCACCAAAAATTGCAACCATTTTTGCAACGACGCTTGTGTTAAACTCACAGAAAATTCCATCCCAAATTGGGTTAATCGCCTTGCTAGAATTGGCTTTCTTTGCAATTGTGTTCTACCAGTGACCTTCAATTCCACCAGAATCAGGCACCACCACAGAATTGAACACAAGGTTGTAACCATGGAAACAAAGAAGGATTTAACAAGTCAATCCATCAAAACTCCCAATTCTAATCCCTCTTCTTCTGCAACTTCTTCTCCTTCCTCGACGTTTCGTCGAGGAAGAAGCCGAACAAGACGAGCTCCTCCTCCATCTTCTCCATTGTTTTCTCATTCTTCATCTTCCTGATATATGGACATCACAGCTCCTAGCTATCTTTTCCTTTATGTCTTCTTCCTTGTGATCTTGGAATATCACTCTCAATCAAAAGCATTCACTTATATGCTTTGGATTCCCTTGAAATGTTCTTTTTTTCCCTCTTGTTCTTTTTCCCCTTCTTTCTCTTTCTTTTTGCATTCATCATCTTTGAATACTCCAAAGGAACAATTGCAAGTTGTAAAAGTTGATATTATTGTGAACTTCAAATCCCAATTCATATTTTCATAATCTGAACAAACTGTAGATTTTTTGTTA

Coding sequence (CDS)

ATGTTGTTGTTTAAGAAACCAGTCGGGAAACAAACCGGAGGATCCGTGCCGGTGTACCTCAATGTGTACGATCTGACCGCGATCAATGGCTACGCTTACTGGTTTGGCCTTGGTGTTTTCCATTCAGGAGTTCAAGTTCATGGTGTGGAATACGCATTTGGAGCTCACGAGTACTCAACAACAGGAATTTTTGAAGGGGTGCCGAAGCAATGCCATGGATTTAGATTTAGAAAGTCAGTTTTGATAGGCAAAACAGATATGAAACCAGCAGAGGTGAGAGCTTTAATGGAGGAACTTGCTCAAATCTACAAAGGAAATGCTTACAATTTAATCACCAAAAATTGCAACCATTTTTGCAACGACGCTTGTGTTAAACTCACAGAAAATTCCATCCCAAATTGGGTTAATCGCCTTGCTAGAATTGGCTTTCTTTGCAATTGTGTTCTACCAGTGACCTTCAATTCCACCAGAATCAGGCACCACCACAGAATTGAACACAAGGTTGTAACCATGGAAACAAAGAAGGATTTAACAAGTCAATCCATCAAAACTCCCAATTCTAATCCCTCTTCTTCTGCAACTTCTTCTCCTTCCTCGACGTTTCGTCGAGGAAGAAGCCGAACAAGACGAGCTCCTCCTCCATCTTCTCCATTGTTTTCTCATTCTTCATCTTCCTGA

Protein sequence

MLLFKKPVGKQTGGSVPVYLNVYDLTAINGYAYWFGLGVFHSGVQVHGVEYAFGAHEYSTTGIFEGVPKQCHGFRFRKSVLIGKTDMKPAEVRALMEELAQIYKGNAYNLITKNCNHFCNDACVKLTENSIPNWVNRLARIGFLCNCVLPVTFNSTRIRHHHRIEHKVVTMETKKDLTSQSIKTPNSNPSSSATSSPSSTFRRGRSRTRRAPPPSSPLFSHSSSS

Homology

[Close]

BLAST of CmaCh08G005950.1 vs. ExPASy Swiss-Prot
Match: Q93VG8 (DeSI-like protein At4g17486 OS=Arabidopsis thaliana OX=3702 GN=At4g17486 PE=2 SV=1)

HSP 1 Score: 189.5 bits (480), Expect = 4.1e-47
Identity = 77/142 (54.23%), Postives = 106/142 (74.65%), Query Frame = 0


Query: 17  PVYLNVYDLTAINGYAYWFGLGVFHSGVQVHGVEYAFGAHEYSTTGIFEGVPKQCHGFRF 76
           PVYLNVYDLT +N Y YWFG+G+FHSG++ H +EY +GAHEY T+G++E  P+ C GF F
Sbjct: 27  PVYLNVYDLTPVNNYLYWFGIGIFHSGIEAHNLEYCYGAHEYPTSGVYEVEPRNCPGFIF 86

Query: 77  RKSVLIGKTDMKPAEVRALMEELAQIYKGNAYNLITKNCNHFCNDACVKLTENSIPNWVN 136
           R+SVL+G T M  ++ R+ ME+L++ Y G+ Y+LI KNCNHF  + C++LT   IP W+N
Sbjct: 87  RRSVLLGTTSMSRSDFRSYMEKLSRKYHGDTYHLIAKNCNHFTEEVCLQLTGKPIPGWIN 146

Query: 137 RLARIGFLCNCVLPVTFNSTRI 159
           RLAR+G  CNC+LP +   T +
Sbjct: 147 RLARVGSFCNCLLPESIQLTAV 168

[Close]

BLAST of CmaCh08G005950.1 vs. ExPASy Swiss-Prot
Match: H2KZK4 (Desumoylating isopeptidase 1 homolog OS=Caenorhabditis elegans OX=6239 GN=F36D4.5 PE=2 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 5.6e-28
Identity = 58/139 (41.73%), Postives = 91/139 (65.47%), Query Frame = 0


Query: 18  VYLNVYDLTAINGYAYWFGLGVFHSGVQVHGVEYAFGAHEYSTTGIFEGVPKQC----HG 77
           V LNVYD+  +N YA   G+G+FHSG++V GVEYA+G H Y  +G+FE  P+        
Sbjct: 32  VRLNVYDMYWLNDYASNIGVGIFHSGIEVFGVEYAYGGHPYQFSGVFENSPQDAEELGET 91

Query: 78  FRFRKSVLIGKTDMKPAEVRALMEELAQIYKGNAYNLITKNCNHFCNDACVKLTENSIPN 137
           F+F++S+++G+T+   +++R L++ L + ++G+ Y+LI++NCNHF      +LT   IP 
Sbjct: 92  FKFKESIVVGETERSTSDIRKLIKSLGEDFRGDRYHLISRNCNHFSAVLARELTGKDIPG 151

Query: 138 WVNRLAR----IGFLCNCV 149
           W+NRLA     I FL  C+
Sbjct: 152 WINRLANLSGSIPFLEKCI 170

[Close]

BLAST of CmaCh08G005950.1 vs. ExPASy Swiss-Prot
Match: Q6DC39 (Deubiquitinase DESI2 OS=Danio rerio OX=7955 GN=desi2 PE=2 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 3.6e-27
Identity = 59/136 (43.38%), Postives = 86/136 (63.24%), Query Frame = 0


Query: 17  PVYLNVYDLTAINGYAYWFGLGVFHSGVQVHGVEYAFGAHEYSTTGIFEGVPKQC----H 76
           PV LNVYD+  IN +    G+GVFHSG++++G E+A+G H Y  +GIFE  P        
Sbjct: 5   PVILNVYDMYWINEFTSSLGIGVFHSGIEIYGREFAYGGHPYPFSGIFEITPGDATELGE 64

Query: 77  GFRFRKSVLIGKTDMKPAEVRALMEELAQIYKGNAYNLITKNCNHFCNDACVKLTENSIP 136
            F+F++++++G TD    +V  ++EE+ + YKGNAY+L+ KNCNHF +     L    IP
Sbjct: 65  TFKFKEAIVLGSTDFTEEDVERIVEEMGKEYKGNAYHLMHKNCNHFSSALSEILCGREIP 124

Query: 137 NWVNRLARIGFLCNCV 149
            WVNRLA   +  +CV
Sbjct: 125 RWVNRLA---YFSSCV 137

[Close]

BLAST of CmaCh08G005950.1 vs. ExPASy Swiss-Prot
Match: Q5PQ09 (Deubiquitinase DESI2 OS=Xenopus laevis OX=8355 GN=desi2 PE=2 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 3.6e-27
Identity = 61/140 (43.57%), Postives = 87/140 (62.14%), Query Frame = 0


Query: 17  PVYLNVYDLTAINGYAYWFGLGVFHSGVQVHGVEYAFGAHEYSTTGIFEGVPKQC----H 76
           P+ LNVYD+  IN Y    G+GVFHSG+QV+G E+A+G H Y  +G+FE  P        
Sbjct: 5   PIILNVYDMYWINEYTSSLGIGVFHSGIQVYGREFAYGGHPYPFSGVFEISPGDSTELGD 64

Query: 77  GFRFRKSVLIGKTDMKPAEVRALMEELAQIYKGNAYNLITKNCNHFCNDACVKLTENSIP 136
            F+F++++ +G TD    ++  ++EEL + YKGNAY+L+ KNCNHF +     L    IP
Sbjct: 65  TFKFKEAIALGSTDFTENDIEKIIEELGKEYKGNAYHLMHKNCNHFSSALSEILCGKEIP 124

Query: 137 NWVNRLAR----IGFLCNCV 149
            WVNRLA     + FL +C+
Sbjct: 125 RWVNRLAYFSTCVPFLQSCL 144

[Close]

BLAST of CmaCh08G005950.1 vs. ExPASy Swiss-Prot
Match: Q9BSY9 (Deubiquitinase DESI2 OS=Homo sapiens OX=9606 GN=DESI2 PE=1 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 1.1e-26
Identity = 62/144 (43.06%), Postives = 89/144 (61.81%), Query Frame = 0


Query: 13  GGSVPVYLNVYDLTAINGYAYWFGLGVFHSGVQVHGVEYAFGAHEYSTTGIFEGVPKQC- 72
           G +  V LNVYD+  +N Y    G+GVFHSG++V+G E+A+G H Y  +GIFE  P    
Sbjct: 2   GANQLVVLNVYDMYWMNEYTSSIGIGVFHSGIEVYGREFAYGGHPYPFSGIFEISPGNAS 61

Query: 73  ---HGFRFRKSVLIGKTDMKPAEVRALMEELAQIYKGNAYNLITKNCNHFCNDACVKLTE 132
                F+F+++V++G TD    ++  ++EEL + YKGNAY+L+ KNCNHF +     L  
Sbjct: 62  ELGETFKFKEAVVLGSTDFLEDDIEKIVEELGKEYKGNAYHLMHKNCNHFSSALSEILCG 121

Query: 133 NSIPNWVNRLAR----IGFLCNCV 149
             IP W+NRLA     I FL +C+
Sbjct: 122 KEIPRWINRLAYFSSCIPFLQSCL 145

[Close]

BLAST of CmaCh08G005950.1 vs. TAIR 10
Match: AT1G80690.1 (PPPDE putative thiol peptidase family protein )

HSP 1 Score: 266.9 bits (681), Expect = 1.4e-71
Identity = 139/214 (64.95%), Postives = 165/214 (77.10%), Query Frame = 0


Query: 14  GSVPVYLNVYDLTAINGYAYWFGLGVFHSGVQVHGVEYAFGAHEYSTTGIFEGVPKQCHG 73
           G+VPVYLNVYDLT INGYAYW GLGV+HSGV+VHG+EYA+GAHEY +TGIFEG PKQC G
Sbjct: 13  GNVPVYLNVYDLTPINGYAYWLGLGVYHSGVEVHGIEYAYGAHEYPSTGIFEGEPKQCEG 72

Query: 74  FRFRKSVLIGKTDMKPAEVRALMEELAQIYKGNAYNLITKNCNHFCNDACVKLTENSIPN 133
           F FRKS+LIGKTD+ P EVRA ME+LA  YKG++YNLITKNCNHFC++ C+KLT N IP+
Sbjct: 73  FTFRKSILIGKTDLGPLEVRATMEQLADNYKGSSYNLITKNCNHFCDETCIKLTGNPIPS 132

Query: 134 WVNRLARIGFLCNCVLPVTFNSTRIRHHHRIEHKVVTMET-KKDLTSQSIKTPNSNPSSS 193
           WVNRLARIGF+CNCVLP T N+TR  ++   + K    E  KK LTS S +  ++  + S
Sbjct: 133 WVNRLARIGFMCNCVLPATINATRFGNNRVNQDKSCEAENEKKKLTSVSSRERSTIATPS 192

Query: 194 ATSSPSSTFRRGRSRTR--RAPPPSSPLFSHSSS 225
           ++SS  S   RGRSR R  RA  PSSPL   SSS
Sbjct: 193 SSSSSPSVQVRGRSRKRRPRALQPSSPLTLGSSS 226

[Close]

BLAST of CmaCh08G005950.1 vs. TAIR 10
Match: AT5G25170.1 (PPPDE putative thiol peptidase family protein )

HSP 1 Score: 252.3 bits (643), Expect = 3.7e-67
Identity = 127/206 (61.65%), Postives = 150/206 (72.82%), Query Frame = 0


Query: 10  KQTGGSVPVYLNVYDLTAINGYAYWFGLGVFHSGVQVHGVEYAFGAHEYSTTGIFEGVPK 69
           K+  GSVPVYLNVYDLT INGYAYW GLG++HSGV+VHGVEY FGAH++STTGIFE  PK
Sbjct: 12  KKKPGSVPVYLNVYDLTPINGYAYWLGLGIYHSGVEVHGVEYGFGAHDHSTTGIFEVEPK 71

Query: 70  QCHGFRFRKSVLIGKTDMKPAEVRALMEELAQIYKGNAYNLITKNCNHFCNDACVKLTEN 129
           QC GF FRKS+LIG+TD+ P  VR  ME+LA+ Y GN+Y+LITKNCNHFCND CV+LT  
Sbjct: 72  QCPGFTFRKSILIGRTDLDPENVRVFMEKLAEEYSGNSYHLITKNCNHFCNDVCVQLTRR 131

Query: 130 SIPNWVNRLARIGFLCNCVLPVTFNSTRIRHHHRIEHKVVTMETKKDLTSQSIKTPNSNP 189
           SIP+WVNRLAR G  CNCVLP   N T++R     E K+  +E KK L S+S + P   P
Sbjct: 132 SIPSWVNRLARFGLFCNCVLPAELNETKVRQVRSKEEKIPEVE-KKKLRSRSSRFP---P 191

Query: 190 SSSATSSPSSTFRRGRSRTRRAPPPS 216
             S +SS S    R   R R+  PPS
Sbjct: 192 GPSLSSSGSLNRSRRGERRRQCLPPS 213

[Close]

BLAST of CmaCh08G005950.1 vs. TAIR 10
Match: AT2G25190.1 (PPPDE putative thiol peptidase family protein )

HSP 1 Score: 234.2 bits (596), Expect = 1.0e-61
Identity = 129/226 (57.08%), Postives = 157/226 (69.47%), Query Frame = 0


Query: 1   MLLFKKPV-GKQTGGSVPVYLNVYDLTAINGYAYWFGLGVFHSGVQVHGVEYAFGAHEYS 60
           ML FK  V  K+  GSVPVYLNVYDLT +N Y YW GLGVFHSGV+VHGVEYAFGAHE S
Sbjct: 1   MLCFKGSVKRKKQSGSVPVYLNVYDLTPMNAYGYWLGLGVFHSGVEVHGVEYAFGAHESS 60

Query: 61  TTGIFEGVPKQCHGFRFRKSVLIGKTDMKPAEVRALMEELAQIYKGNAYNLITKNCNHFC 120
           +TGIFE  PK+C GF FRKS+L+GKTD+   EVR  ME+LA+ Y+GN Y+LIT+NCNHFC
Sbjct: 61  STGIFEVEPKKCPGFTFRKSILVGKTDLVAKEVRVFMEKLAEEYQGNKYHLITRNCNHFC 120

Query: 121 NDACVKLTENSIPNWVNRLARIGFLCNCVLPVTFNSTRIRHHHRIEHKVVTMETKKDLTS 180
           N+ C+KL + SIP WVNRLAR+G LCNCVLP   N  ++R   R+    ++   KK L +
Sbjct: 121 NEVCLKLAQKSIPRWVNRLARLGVLCNCVLPPRLNEAKVR---RVGKGELSESEKKKLRN 180

Query: 181 QSIKTPNSNPSSSATSSPSSTFRRGRSRTRRAPPPSSPLFSHSSSS 226
           +S     S+P  S++ S SST    RS  R     + P  S SSSS
Sbjct: 181 RS----RSDPLLSSSPS-SSTPDNHRSHIRAKSSGNHPSSSSSSSS 218

[Close]

BLAST of CmaCh08G005950.1 vs. TAIR 10
Match: AT4G31980.1 (unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF247, plant (InterPro:IPR004158), Protein of unknown function DUF862, eukaryotic (InterPro:IPR008580); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF247) (TAIR:AT5G11290.1); Has 1967 Blast hits to 1844 proteins in 183 species: Archae - 0; Bacteria - 6; Metazoa - 223; Fungi - 83; Plants - 1477; Viruses - 0; Other Eukaryotes - 178 (source: NCBI BLink). )

HSP 1 Score: 223.8 bits (569), Expect = 1.4e-58
Identity = 114/216 (52.78%), Postives = 153/216 (70.83%), Query Frame = 0


Query: 10  KQTGGSVPVYLNVYDLTAINGYAYWFGLGVFHSGVQVHGVEYAFGAHEYSTTGIFEGVPK 69
           K+  G+VPVYLNVYDLT +N Y YW G+G++HSG++VHGVEY +GAHE S++GIFE  PK
Sbjct: 11  KKNSGTVPVYLNVYDLTPMNVYGYWLGIGIYHSGLEVHGVEYGYGAHEKSSSGIFEVEPK 70

Query: 70  QCHGFRFRKSVLIGKTDMKPAEVRALMEELAQIYKGNAYNLITKNCNHFCNDACVKLTEN 129
           +C GF FRKS+L+G+T+MK  EVR+ ME+L++ Y+GN Y+LIT+NCNHFCN   +KLT  
Sbjct: 71  KCPGFTFRKSILVGETEMKAKEVRSFMEKLSEEYQGNKYHLITRNCNHFCNHVSLKLTHK 130

Query: 130 SIPNWVNRLARIGFLCNCVLPVTFNSTRIRHHHRIEHKVVTME-TKKDLTSQSIKTPNSN 189
           SIP+WVNRLAR+GFLCNCVLP   N T+++   +    ++  E TKK    + I+   S 
Sbjct: 131 SIPSWVNRLARLGFLCNCVLPACLNETKVKRVGKDGKLLLEGENTKKKKRKKKIRRSRSG 190

Query: 190 PSSSATSSP--SSTFRRGRSRTRRAPP----PSSPL 219
           P SS++S+    +T    RS +   PP    PS PL
Sbjct: 191 PLSSSSSNARLDNTPTHNRSISTGNPPLSASPSCPL 226

[Close]

BLAST of CmaCh08G005950.1 vs. TAIR 10
Match: AT1G47740.1 (PPPDE putative thiol peptidase family protein )

HSP 1 Score: 203.8 bits (517), Expect = 1.5e-52
Identity = 108/212 (50.94%), Postives = 137/212 (64.62%), Query Frame = 0


Query: 14  GSVPVYLNVYDLTAINGYAYWFGLGVFHSGVQVHGVEYAFGAHEYSTTGIFEGVPKQCHG 73
           G  PVYLNVYDLT INGY YW GLG+FHSGV+VHGVEYAFGAH+Y+T+G+FE  P+QC G
Sbjct: 67  GRAPVYLNVYDLTPINGYIYWAGLGIFHSGVEVHGVEYAFGAHDYATSGVFEVEPRQCPG 126

Query: 74  FRFRKSVLIGKTDMKPAEVRALMEELAQIYKGNAYNLITKNCNHFCNDACVKLTENSIPN 133
           F+F+KS+ IG T++ P +VR  ME++A  Y GN Y+LI KNCNHFC D C KLT   IP 
Sbjct: 127 FKFKKSIFIGTTNLNPTQVREFMEDMACSYYGNMYHLIVKNCNHFCQDVCYKLTGKKIPK 186

Query: 134 WVNRLARIGFLCNCVLPVTFNSTRIRHHHRIEHKVVTMETKKDLTSQSIKTPNSNPSSSA 193
           WVNRLA+IG +C+C+LP +   T + H    + ++   E +K     S    +S      
Sbjct: 187 WVNRLAQIGSVCSCILPESLKITAVCHDP--DGQIPEEENEKRSLRSSFSCLSSISMRQK 246

Query: 194 TSSPSSTFRRGRSRTRRAPPPSSPLFSHSSSS 226
             S SS F   +S  R   PP     S S+SS
Sbjct: 247 QLSTSSLFL--QSPLRGCLPPWQLKRSKSNSS 274

The following BLAST results are available for this feature:

BLAST of CmaCh08G005950.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q93VG8	4.1e-47	54.23	DeSI-like protein At4g17486 OS=Arabidopsis thaliana OX=3702 GN=At4g17486 PE=2 SV...	[more]
H2KZK4	5.6e-28	41.73	Desumoylating isopeptidase 1 homolog OS=Caenorhabditis elegans OX=6239 GN=F36D4....	[more]
Q6DC39	3.6e-27	43.38	Deubiquitinase DESI2 OS=Danio rerio OX=7955 GN=desi2 PE=2 SV=1	[more]
Q5PQ09	3.6e-27	43.57	Deubiquitinase DESI2 OS=Xenopus laevis OX=8355 GN=desi2 PE=2 SV=1	[more]
Q9BSY9	1.1e-26	43.06	Deubiquitinase DESI2 OS=Homo sapiens OX=9606 GN=DESI2 PE=1 SV=1	[more]

BLAST of CmaCh08G005950.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G80690.1	1.4e-71	64.95	PPPDE putative thiol peptidase family protein	[more]
AT5G25170.1	3.7e-67	61.65	PPPDE putative thiol peptidase family protein	[more]
AT2G25190.1	1.0e-61	57.08	PPPDE putative thiol peptidase family protein	[more]
AT4G31980.1	1.4e-58	52.78	unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF247,...	[more]
AT1G47740.1	1.5e-52	50.94	PPPDE putative thiol peptidase family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008580	PPPDE peptidase domain	SMART	SM01179	DUF862_2a	coord: 16..154 e-value: 2.9E-53 score: 192.9
IPR008580	PPPDE peptidase domain	PFAM	PF05903	Peptidase_C97	coord: 17..150 e-value: 9.2E-46 score: 155.4
IPR008580	PPPDE peptidase domain	PANTHER	PTHR12378	DESUMOYLATING ISOPEPTIDASE	coord: 5..225
IPR008580	PPPDE peptidase domain	PROSITE	PS51858	PPPDE	coord: 16..153 score: 56.334103
IPR042266	PPPDE peptidase domain superfamily	GENE3D	3.90.1720.30	PPPDE domains	coord: 12..171 e-value: 3.4E-43 score: 149.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 173..225
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 174..202
None	No IPR available	PANTHER	PTHR12378:SF52	F23A5.4 PROTEIN	coord: 5..225

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmaCh08G005950	CmaCh08G005950	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh08G005950.1:exon:648	CmaCh08G005950.1:exon:648	exon
CmaCh08G005950.1:exon:649	CmaCh08G005950.1:exon:649	exon
CmaCh08G005950.1:exon:650	CmaCh08G005950.1:exon:650	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh08G005950.1:five_prime_utr	CmaCh08G005950.1:five_prime_utr	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh08G005950.1:cds	CmaCh08G005950.1:cds	CDS
CmaCh08G005950.1:cds	CmaCh08G005950.1:cds_2	CDS
CmaCh08G005950.1:cds	CmaCh08G005950.1:cds_3	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh08G005950.1:three_prime_utr	CmaCh08G005950.1:three_prime_utr	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmaCh08G005950.1	CmaCh08G005950.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016579	protein deubiquitination
molecular_function	GO:0008233	peptidase activity
molecular_function	GO:0101005	deubiquitinase activity