Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCACATAATGGAGAAGCAATATCACCAGTACCAGATCTTAATACAACCATTCTTCAAGCAATTCAAGGTATGATGGAAATGATGATGGAAGATAGACAAGAAAGAAGGGCGCAACAACAAAGACAAGAACAAACATTACAAGAAGATGAAGGTATAGTAGTACAAGAAAGACAAGTTGAAAGAAGATGGAGAGGAAGAAATAACCATGCAACTATTATGCAATCTAGAAGGATGGAAAGAGTACATGAAGATAGAGATGGGGGAGTTAAACTCAAAATCCCACCTTTTTGTGGAACGGCAGATTCTGAGGCATACTTGCAATGGGAAAGAAAGATAGAGCATGTGTTTGATTGCAACACCTATAGTGAAAATAAGAAGATGAGACTTGCTATTGCCGAATTTACCAATTATGTCGGTGATTGGTACCAACATCTCAAATCCGAGAGAAGAAGAAAAGAGGAGCATCCAATAGAGACTTGGGAAGAACTTAAAGAAGCCATGAGAAAAAGGTATGTTCCAAAACATTATGAAAGAAATTTGAAAACTAAATTGCAAGGTTTGAGGCAAGAAACAAAAAGTGTGGCGGAATATTATCTAGAGAAGACTATGATGGAAATAGCAAATGTTAGAGAAGTAGAAGAAGATATCATGTATAGATTCATTGGAGGTTTGAATCGAGAAATTGCTCATCTTGTTGATAGAAATCCACCACCAAATCTGGAAGACATGTATCATTATGCTCTCAAAATTGAAGACCAATTGAAGGAAGAAAAAGAGCATTCAAAAAGGTACACATCACGAACTAACACCTTTTCAAATTCTAAAACTTGGAACAAGGATAGTTTTGTGGATAGAAATGGATCGTTGTCACCAAAAGAAAAGTTTGTGGCTGCTAAAAGAGTGGAAGCTGAGAGTTCCAATGGTAAAAAGAATGAAACTTCAAAGACGGTAAAGGAGAAGTCTAGTTCTATTCAATGTTGGAAGTGCAAAGGGTTTGGACACATGAGCAAAGAGTGTGTTAATAAAAATGTTATAGTGATAAGGAATGGTATACTTGATTCAGATGATGAATGTGAGGATCATGATTCACAGCTTGTGGAAGAAATCGCAGCATATGATGATGAATATGTTGAAGAAGGTAATTTCATATCTTTGATCACAGCATTGTTGGCGCTTAGCGCTTATCATTTGAGCCTCCACCCTTTTAGCAAATGA
mRNA sequence
ATGTCACATAATGGAGAAGCAATATCACCAGTACCAGATCTTAATACAACCATTCTTCAAGCAATTCAAGGTATGATGGAAATGATGATGGAAGATAGACAAGAAAGAAGGGCGCAACAACAAAGACAAGAACAAACATTACAAGAAGATGAAGGTATAGTAGTACAAGAAAGACAAGTTGAAAGAAGATGGAGAGGAAGAAATAACCATGCAACTATTATGCAATCTAGAAGGATGGAAAGAGTACATGAAGATAGAGATGGGGGAGTTAAACTCAAAATCCCACCTTTTTGTGGAACGGCAGATTCTGAGGCATACTTGCAATGGGAAAGAAAGATAGAGCATGTGTTTGATTGCAACACCTATAGTGAAAATAAGAAGATGAGACTTGCTATTGCCGAATTTACCAATTATGTCGGTGATTGGTACCAACATCTCAAATCCGAGAGAAGAAGAAAAGAGGAGCATCCAATAGAGACTTGGGAAGAACTTAAAGAAGCCATGAGAAAAAGGTATGTTCCAAAACATTATGAAAGAAATTTGAAAACTAAATTGCAAGGTTTGAGGCAAGAAACAAAAAGTGTGGCGGAATATTATCTAGAGAAGACTATGATGGAAATAGCAAATGTTAGAGAAGTAGAAGAAGATATCATGTATAGATTCATTGGAGGTTTGAATCGAGAAATTGCTCATCTTGTTGATAGAAATCCACCACCAAATCTGGAAGACATGTATCATTATGCTCTCAAAATTGAAGACCAATTGAAGGAAGAAAAAGAGCATTCAAAAAGGTACACATCACGAACTAACACCTTTTCAAATTCTAAAACTTGGAACAAGGATAGTTTTGTGGATAGAAATGGATCGTTGTCACCAAAAGAAAAGTTTGTGGCTGCTAAAAGAGTGGAAGCTGAGAGTTCCAATGGTAAAAAGAATGAAACTTCAAAGACGGTAAAGGAGAAGTCTAGTTCTATTCAATGTTGGAAGTGCAAAGGGTTTGGACACATGAGCAAAGAGTGTGTTAATAAAAATGTTATAGTGATAAGGAATGGTATACTTGATTCAGATGATGAATGTGAGGATCATGATTCACAGCTTGTGGAAGAAATCGCAGCATATGATGATGAATATGTTGAAGAAGGTAATTTCATATCTTTGATCACAGCATTGTTGGCGCTTAGCGCTTATCATTTGAGCCTCCACCCTTTTAGCAAATGA
Coding sequence (CDS)
ATGTCACATAATGGAGAAGCAATATCACCAGTACCAGATCTTAATACAACCATTCTTCAAGCAATTCAAGGTATGATGGAAATGATGATGGAAGATAGACAAGAAAGAAGGGCGCAACAACAAAGACAAGAACAAACATTACAAGAAGATGAAGGTATAGTAGTACAAGAAAGACAAGTTGAAAGAAGATGGAGAGGAAGAAATAACCATGCAACTATTATGCAATCTAGAAGGATGGAAAGAGTACATGAAGATAGAGATGGGGGAGTTAAACTCAAAATCCCACCTTTTTGTGGAACGGCAGATTCTGAGGCATACTTGCAATGGGAAAGAAAGATAGAGCATGTGTTTGATTGCAACACCTATAGTGAAAATAAGAAGATGAGACTTGCTATTGCCGAATTTACCAATTATGTCGGTGATTGGTACCAACATCTCAAATCCGAGAGAAGAAGAAAAGAGGAGCATCCAATAGAGACTTGGGAAGAACTTAAAGAAGCCATGAGAAAAAGGTATGTTCCAAAACATTATGAAAGAAATTTGAAAACTAAATTGCAAGGTTTGAGGCAAGAAACAAAAAGTGTGGCGGAATATTATCTAGAGAAGACTATGATGGAAATAGCAAATGTTAGAGAAGTAGAAGAAGATATCATGTATAGATTCATTGGAGGTTTGAATCGAGAAATTGCTCATCTTGTTGATAGAAATCCACCACCAAATCTGGAAGACATGTATCATTATGCTCTCAAAATTGAAGACCAATTGAAGGAAGAAAAAGAGCATTCAAAAAGGTACACATCACGAACTAACACCTTTTCAAATTCTAAAACTTGGAACAAGGATAGTTTTGTGGATAGAAATGGATCGTTGTCACCAAAAGAAAAGTTTGTGGCTGCTAAAAGAGTGGAAGCTGAGAGTTCCAATGGTAAAAAGAATGAAACTTCAAAGACGGTAAAGGAGAAGTCTAGTTCTATTCAATGTTGGAAGTGCAAAGGGTTTGGACACATGAGCAAAGAGTGTGTTAATAAAAATGTTATAGTGATAAGGAATGGTATACTTGATTCAGATGATGAATGTGAGGATCATGATTCACAGCTTGTGGAAGAAATCGCAGCATATGATGATGAATATGTTGAAGAAGGTAATTTCATATCTTTGATCACAGCATTGTTGGCGCTTAGCGCTTATCATTTGAGCCTCCACCCTTTTAGCAAATGA
Protein sequence
MSHNGEAISPVPDLNTTILQAIQGMMEMMMEDRQERRAQQQRQEQTLQEDEGIVVQERQVERRWRGRNNHATIMQSRRMERVHEDRDGGVKLKIPPFCGTADSEAYLQWERKIEHVFDCNTYSENKKMRLAIAEFTNYVGDWYQHLKSERRRKEEHPIETWEELKEAMRKRYVPKHYERNLKTKLQGLRQETKSVAEYYLEKTMMEIANVREVEEDIMYRFIGGLNREIAHLVDRNPPPNLEDMYHYALKIEDQLKEEKEHSKRYTSRTNTFSNSKTWNKDSFVDRNGSLSPKEKFVAAKRVEAESSNGKKNETSKTVKEKSSSIQCWKCKGFGHMSKECVNKNVIVIRNGILDSDDECEDHDSQLVEEIAAYDDEYVEEGNFISLITALLALSAYHLSLHPFSK
Homology
BLAST of CmaCh00G002450.1 vs. ExPASy TrEMBL
Match:
A0A6J1EVI6 (LOW QUALITY PROTEIN: uncharacterized protein LOC111438459 OS=Cucurbita moschata OX=3662 GN=LOC111438459 PE=4 SV=1)
HSP 1 Score: 582.8 bits (1501), Expect = 1.1e-162
Identity = 315/389 (80.98%), Postives = 326/389 (83.80%), Query Frame = 0
Query: 1 MSHNGEAISPVPDLNTTILQAIQGMMEMMMEDRQERRAQQQRQEQTLQEDEGIVVQERQV 60
MSHNGEA+ PVPDLNTTILQAIQGMMEMMMEDRQERRAQQQRQE+T
Sbjct: 1 MSHNGEAVPPVPDLNTTILQAIQGMMEMMMEDRQERRAQQQRQERT-------------- 60
Query: 61 ERRWRGRNNHATIMQSRRMERVHEDRDGGVKLKIPPFCGTADSEAYLQWERKIEHVFDCN 120
RRMERVHEDRDGGVKLKIPPFC TADSEAYLQWERKIEHVFDCN
Sbjct: 61 ---------------PRRMERVHEDRDGGVKLKIPPFCVTADSEAYLQWERKIEHVFDCN 120
Query: 121 TYSENKKMRLAIAEFTNYVGDWYQHLKSERRRKEEHPIETWEELKEAMRKRYVPKHYERN 180
TYSENKKMRLAIAEFTN+ WYQHLKSERRRKEE P+ETWEELKEAMRKRYVPKHYERN
Sbjct: 121 TYSENKKMRLAIAEFTNH-AXWYQHLKSERRRKEEDPVETWEELKEAMRKRYVPKHYERN 180
Query: 181 LKTKLQGLRQETKSVAEYYLE-KTMMEIANVREVEEDIMYRFIGGLNREIAHLVDRNPPP 240
LKTKLQGLRQ TKSVAEYY E +TMME ANVRE EED M RF+GGLNREIAHLVDRNPPP
Sbjct: 181 LKTKLQGLRQGTKSVAEYYQEMETMMERANVREEEEDTMSRFLGGLNREIAHLVDRNPPP 240
Query: 241 NLEDMYHYALKIEDQLKEEKEHSKRYTSRTNTFSNSKTWNKDSFVDRNGSLSPKEKFVAA 300
LEDM HYALKIEDQLKEEKEHSKRYTSRTNTFSNSKTWNKDSFV+RN S+SPKEKFVAA
Sbjct: 241 YLEDMCHYALKIEDQLKEEKEHSKRYTSRTNTFSNSKTWNKDSFVNRNESMSPKEKFVAA 300
Query: 301 KRVEAESSNGKKNETSKTVKEKSSSIQCWKCKGFGHMSKECVNKNVIVIRNGILDSDDEC 360
KRVEAESSN KKNE SKTV+EKSSSIQCWKCKGFGHMSKECVNK V+VIRNGILDSDDE
Sbjct: 301 KRVEAESSNCKKNEASKTVQEKSSSIQCWKCKGFGHMSKECVNKKVMVIRNGILDSDDE- 346
Query: 361 EDHDSQLVEEIAAYDDEYVEEGNFISLIT 389
+YDDEYVEEGN ISLIT
Sbjct: 361 ------------SYDDEYVEEGNSISLIT 346
BLAST of CmaCh00G002450.1 vs. ExPASy TrEMBL
Match:
A0A5D3DRJ1 (F15O4.13 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold111G00130 PE=4 SV=1)
HSP 1 Score: 541.6 bits (1394), Expect = 2.8e-150
Identity = 284/397 (71.54%), Postives = 331/397 (83.38%), Query Frame = 0
Query: 1 MSHNGEAISPVPDLNTTILQAIQGMMEMMMEDRQERRAQQQRQEQTLQEDEGIV---VQE 60
MSH+GE + V D N ILQAIQGM+E+M E+RQERRAQQQR+ + QEDEG+ E
Sbjct: 1 MSHDGEEVPEVIDPNVAILQAIQGMLELMREERQERRAQQQREVRPFQEDEGMFDLNAHE 60
Query: 61 RQV----ERRWRGRNNHATIMQSRRMERVHEDRDGGVKLKIPPFCGTADSEAYLQWERKI 120
RQ+ R RGRNN A +MQ RRMERVHEDRDGGVKLKIPPF GTADSE YLQWERKI
Sbjct: 61 RQLGGRGNVRGRGRNNLANVMQPRRMERVHEDRDGGVKLKIPPFTGTADSETYLQWERKI 120
Query: 121 EHVFDCNTYSENKKMRLAIAEFTNYVGDWYQHLKSERRRKEEHPIETWEELKEAMRKRYV 180
EHVFDCNT+SENKKM+LAIAEFTNY +WY +LKSERRRKEE PIETWEELKEAMRKR+V
Sbjct: 121 EHVFDCNTFSENKKMKLAIAEFTNYASEWYHYLKSERRRKEEDPIETWEELKEAMRKRFV 180
Query: 181 PKHYERNLKTKLQGLRQETKSVAEYYLE-KTMMEIANVREVEEDIMYRFIGGLNREIAHL 240
PKHYER+LKTKLQ LRQ TKSVAEYY E +T++ A ++E EED M RF+GGLN+EIAHL
Sbjct: 181 PKHYERDLKTKLQSLRQGTKSVAEYYREMETLIGRARIQEDEEDTMSRFLGGLNQEIAHL 240
Query: 241 VDRNPPPNLEDMYHYALKIEDQLKEEKEHSKRYTSRTNTFSNSKTWNKDSFVDRNGSLSP 300
VDRNPP N+EDMYHYA+KIE QLKEEKE SKRY S+T+TFS+S TWNKD FV+RN S+
Sbjct: 241 VDRNPPYNMEDMYHYAIKIEAQLKEEKERSKRYVSKTHTFSSSNTWNKDGFVNRNESMQS 300
Query: 301 KEKFVAAKRVEAESSNGKKNETSKTVKEKSSSIQCWKCKGFGHMSKECVNKNVIVIRNGI 360
+ KFVAA++VE ESSN KK E SK V+EK+SSIQCWKCKGFGHMSK+C+NK V+V+RNG+
Sbjct: 301 RGKFVAAQKVETESSNTKKFEASKEVREKTSSIQCWKCKGFGHMSKDCINKRVMVVRNGV 360
Query: 361 LDSDDECEDHDSQLVEEI-AAYDDEYVEEGNFISLIT 389
+DS+DECE++D+QL EE DDEY+EEG+ ISLIT
Sbjct: 361 IDSEDECEENDAQLEEEYETPVDDEYIEEGSSISLIT 397
BLAST of CmaCh00G002450.1 vs. ExPASy TrEMBL
Match:
A0A5D3C3D3 (F15O4.13 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold143G001490 PE=4 SV=1)
HSP 1 Score: 541.6 bits (1394), Expect = 2.8e-150
Identity = 284/397 (71.54%), Postives = 331/397 (83.38%), Query Frame = 0
Query: 1 MSHNGEAISPVPDLNTTILQAIQGMMEMMMEDRQERRAQQQRQEQTLQEDEGIV---VQE 60
MSH+GE + V D N ILQAIQGM+E+M E+RQERRAQQQR+ + QEDEG+ E
Sbjct: 1 MSHDGEEVPEVIDPNVAILQAIQGMLELMREERQERRAQQQREVRPFQEDEGMFDLNAHE 60
Query: 61 RQV----ERRWRGRNNHATIMQSRRMERVHEDRDGGVKLKIPPFCGTADSEAYLQWERKI 120
RQ+ R RGRNN A +MQ RRMERVHEDRDGGVKLKIPPF GTADSE YLQWERKI
Sbjct: 61 RQLGGRGNVRGRGRNNLANVMQPRRMERVHEDRDGGVKLKIPPFTGTADSETYLQWERKI 120
Query: 121 EHVFDCNTYSENKKMRLAIAEFTNYVGDWYQHLKSERRRKEEHPIETWEELKEAMRKRYV 180
EHVFDCNT+SENKKM+LAIAEFTNY +WY +LKSERRRKEE PIETWEELKEAMRKR+V
Sbjct: 121 EHVFDCNTFSENKKMKLAIAEFTNYASEWYHYLKSERRRKEEDPIETWEELKEAMRKRFV 180
Query: 181 PKHYERNLKTKLQGLRQETKSVAEYYLE-KTMMEIANVREVEEDIMYRFIGGLNREIAHL 240
PKHYER+LKTKLQ LRQ TKSVAEYY E +T++ A ++E EED M RF+GGLN+EIAHL
Sbjct: 181 PKHYERDLKTKLQSLRQGTKSVAEYYREMETLIGRARIQEDEEDTMSRFLGGLNQEIAHL 240
Query: 241 VDRNPPPNLEDMYHYALKIEDQLKEEKEHSKRYTSRTNTFSNSKTWNKDSFVDRNGSLSP 300
VDRNPP N+EDMYHYA+KIE QLKEEKE SKRY S+T+TFS+S TWNKD FV+RN S+
Sbjct: 241 VDRNPPYNMEDMYHYAIKIEAQLKEEKERSKRYVSKTHTFSSSNTWNKDGFVNRNESMQS 300
Query: 301 KEKFVAAKRVEAESSNGKKNETSKTVKEKSSSIQCWKCKGFGHMSKECVNKNVIVIRNGI 360
+ KFVAA++VE ESSN KK E SK V+EK+SSIQCWKCKGFGHMSK+C+NK V+V+RNG+
Sbjct: 301 RGKFVAAQKVETESSNTKKFEASKEVREKTSSIQCWKCKGFGHMSKDCINKRVMVVRNGV 360
Query: 361 LDSDDECEDHDSQLVEEI-AAYDDEYVEEGNFISLIT 389
+DS+DECE++D+QL EE DDEY+EEG+ ISLIT
Sbjct: 361 IDSEDECEENDAQLEEEYETPVDDEYIEEGSSISLIT 397
BLAST of CmaCh00G002450.1 vs. ExPASy TrEMBL
Match:
A0A5D3CK70 (F15O4.13 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold304G00110 PE=4 SV=1)
HSP 1 Score: 541.6 bits (1394), Expect = 2.8e-150
Identity = 284/397 (71.54%), Postives = 331/397 (83.38%), Query Frame = 0
Query: 1 MSHNGEAISPVPDLNTTILQAIQGMMEMMMEDRQERRAQQQRQEQTLQEDEGIV---VQE 60
MSH+GE + V D N ILQAIQGM+E+M E+RQERRAQQQR+ + QEDEG+ E
Sbjct: 1 MSHDGEEVPEVIDPNVAILQAIQGMLELMREERQERRAQQQREVRPFQEDEGMFDLNAHE 60
Query: 61 RQV----ERRWRGRNNHATIMQSRRMERVHEDRDGGVKLKIPPFCGTADSEAYLQWERKI 120
RQ+ R RGRNN A +MQ RRMERVHEDRDGGVKLKIPPF GTADSE YLQWERKI
Sbjct: 61 RQLGGRGNVRGRGRNNLANVMQPRRMERVHEDRDGGVKLKIPPFTGTADSETYLQWERKI 120
Query: 121 EHVFDCNTYSENKKMRLAIAEFTNYVGDWYQHLKSERRRKEEHPIETWEELKEAMRKRYV 180
EHVFDCNT+SENKKM+LAIAEFTNY +WY +LKSERRRKEE PIETWEELKEAMRKR+V
Sbjct: 121 EHVFDCNTFSENKKMKLAIAEFTNYASEWYHYLKSERRRKEEDPIETWEELKEAMRKRFV 180
Query: 181 PKHYERNLKTKLQGLRQETKSVAEYYLE-KTMMEIANVREVEEDIMYRFIGGLNREIAHL 240
PKHYER+LKTKLQ LRQ TKSVAEYY E +T++ A ++E EED M RF+GGLN+EIAHL
Sbjct: 181 PKHYERDLKTKLQSLRQGTKSVAEYYREMETLIGRARIQEDEEDTMSRFLGGLNQEIAHL 240
Query: 241 VDRNPPPNLEDMYHYALKIEDQLKEEKEHSKRYTSRTNTFSNSKTWNKDSFVDRNGSLSP 300
VDRNPP N+EDMYHYA+KIE QLKEEKE SKRY S+T+TFS+S TWNKD FV+RN S+
Sbjct: 241 VDRNPPYNMEDMYHYAIKIEAQLKEEKERSKRYVSKTHTFSSSNTWNKDGFVNRNESMQS 300
Query: 301 KEKFVAAKRVEAESSNGKKNETSKTVKEKSSSIQCWKCKGFGHMSKECVNKNVIVIRNGI 360
+ KFVAA++VE ESSN KK E SK V+EK+SSIQCWKCKGFGHMSK+C+NK V+V+RNG+
Sbjct: 301 RGKFVAAQKVETESSNTKKFEASKEVREKTSSIQCWKCKGFGHMSKDCINKRVMVVRNGV 360
Query: 361 LDSDDECEDHDSQLVEEI-AAYDDEYVEEGNFISLIT 389
+DS+DECE++D+QL EE DDEY+EEG+ ISLIT
Sbjct: 361 IDSEDECEENDAQLEEEYETPVDDEYIEEGSSISLIT 397
BLAST of CmaCh00G002450.1 vs. ExPASy TrEMBL
Match:
A0A5D3BWE8 (F15O4.13 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1738G00600 PE=4 SV=1)
HSP 1 Score: 541.6 bits (1394), Expect = 2.8e-150
Identity = 284/397 (71.54%), Postives = 331/397 (83.38%), Query Frame = 0
Query: 1 MSHNGEAISPVPDLNTTILQAIQGMMEMMMEDRQERRAQQQRQEQTLQEDEGIV---VQE 60
MSH+GE + V D N ILQAIQGM+E+M E+RQERRAQQQR+ + QEDEG+ E
Sbjct: 1 MSHDGEEVPEVIDPNVAILQAIQGMLELMREERQERRAQQQREVRPFQEDEGMFDLNAHE 60
Query: 61 RQV----ERRWRGRNNHATIMQSRRMERVHEDRDGGVKLKIPPFCGTADSEAYLQWERKI 120
RQ+ R RGRNN A +MQ RRMERVHEDRDGGVKLKIPPF GTADSE YLQWERKI
Sbjct: 61 RQLGGRGNVRGRGRNNLANVMQPRRMERVHEDRDGGVKLKIPPFTGTADSETYLQWERKI 120
Query: 121 EHVFDCNTYSENKKMRLAIAEFTNYVGDWYQHLKSERRRKEEHPIETWEELKEAMRKRYV 180
EHVFDCNT+SENKKM+LAIAEFTNY +WY +LKSERRRKEE PIETWEELKEAMRKR+V
Sbjct: 121 EHVFDCNTFSENKKMKLAIAEFTNYASEWYHYLKSERRRKEEDPIETWEELKEAMRKRFV 180
Query: 181 PKHYERNLKTKLQGLRQETKSVAEYYLE-KTMMEIANVREVEEDIMYRFIGGLNREIAHL 240
PKHYER+LKTKLQ LRQ TKSVAEYY E +T++ A ++E EED M RF+GGLN+EIAHL
Sbjct: 181 PKHYERDLKTKLQSLRQGTKSVAEYYREMETLIGRARIQEDEEDTMSRFLGGLNQEIAHL 240
Query: 241 VDRNPPPNLEDMYHYALKIEDQLKEEKEHSKRYTSRTNTFSNSKTWNKDSFVDRNGSLSP 300
VDRNPP N+EDMYHYA+KIE QLKEEKE SKRY S+T+TFS+S TWNKD FV+RN S+
Sbjct: 241 VDRNPPYNMEDMYHYAIKIEAQLKEEKERSKRYVSKTHTFSSSNTWNKDGFVNRNESMQS 300
Query: 301 KEKFVAAKRVEAESSNGKKNETSKTVKEKSSSIQCWKCKGFGHMSKECVNKNVIVIRNGI 360
+ KFVAA++VE ESSN KK E SK V+EK+SSIQCWKCKGFGHMSK+C+NK V+V+RNG+
Sbjct: 301 RGKFVAAQKVETESSNTKKFEASKEVREKTSSIQCWKCKGFGHMSKDCINKRVMVVRNGV 360
Query: 361 LDSDDECEDHDSQLVEEI-AAYDDEYVEEGNFISLIT 389
+DS+DECE++D+QL EE DDEY+EEG+ ISLIT
Sbjct: 361 IDSEDECEENDAQLEEEYETPVDDEYIEEGSSISLIT 397
BLAST of CmaCh00G002450.1 vs. NCBI nr
Match:
XP_022932136.1 (LOW QUALITY PROTEIN: uncharacterized protein LOC111438459, partial [Cucurbita moschata])
HSP 1 Score: 582.8 bits (1501), Expect = 2.3e-162
Identity = 315/389 (80.98%), Postives = 326/389 (83.80%), Query Frame = 0
Query: 1 MSHNGEAISPVPDLNTTILQAIQGMMEMMMEDRQERRAQQQRQEQTLQEDEGIVVQERQV 60
MSHNGEA+ PVPDLNTTILQAIQGMMEMMMEDRQERRAQQQRQE+T
Sbjct: 1 MSHNGEAVPPVPDLNTTILQAIQGMMEMMMEDRQERRAQQQRQERT-------------- 60
Query: 61 ERRWRGRNNHATIMQSRRMERVHEDRDGGVKLKIPPFCGTADSEAYLQWERKIEHVFDCN 120
RRMERVHEDRDGGVKLKIPPFC TADSEAYLQWERKIEHVFDCN
Sbjct: 61 ---------------PRRMERVHEDRDGGVKLKIPPFCVTADSEAYLQWERKIEHVFDCN 120
Query: 121 TYSENKKMRLAIAEFTNYVGDWYQHLKSERRRKEEHPIETWEELKEAMRKRYVPKHYERN 180
TYSENKKMRLAIAEFTN+ WYQHLKSERRRKEE P+ETWEELKEAMRKRYVPKHYERN
Sbjct: 121 TYSENKKMRLAIAEFTNH-AXWYQHLKSERRRKEEDPVETWEELKEAMRKRYVPKHYERN 180
Query: 181 LKTKLQGLRQETKSVAEYYLE-KTMMEIANVREVEEDIMYRFIGGLNREIAHLVDRNPPP 240
LKTKLQGLRQ TKSVAEYY E +TMME ANVRE EED M RF+GGLNREIAHLVDRNPPP
Sbjct: 181 LKTKLQGLRQGTKSVAEYYQEMETMMERANVREEEEDTMSRFLGGLNREIAHLVDRNPPP 240
Query: 241 NLEDMYHYALKIEDQLKEEKEHSKRYTSRTNTFSNSKTWNKDSFVDRNGSLSPKEKFVAA 300
LEDM HYALKIEDQLKEEKEHSKRYTSRTNTFSNSKTWNKDSFV+RN S+SPKEKFVAA
Sbjct: 241 YLEDMCHYALKIEDQLKEEKEHSKRYTSRTNTFSNSKTWNKDSFVNRNESMSPKEKFVAA 300
Query: 301 KRVEAESSNGKKNETSKTVKEKSSSIQCWKCKGFGHMSKECVNKNVIVIRNGILDSDDEC 360
KRVEAESSN KKNE SKTV+EKSSSIQCWKCKGFGHMSKECVNK V+VIRNGILDSDDE
Sbjct: 301 KRVEAESSNCKKNEASKTVQEKSSSIQCWKCKGFGHMSKECVNKKVMVIRNGILDSDDE- 346
Query: 361 EDHDSQLVEEIAAYDDEYVEEGNFISLIT 389
+YDDEYVEEGN ISLIT
Sbjct: 361 ------------SYDDEYVEEGNSISLIT 346
BLAST of CmaCh00G002450.1 vs. NCBI nr
Match:
TYK22420.1 (Transposon Ty3-I Gag-Pol polyprotein [Cucumis melo var. makuwa])
HSP 1 Score: 541.6 bits (1394), Expect = 5.9e-150
Identity = 284/397 (71.54%), Postives = 331/397 (83.38%), Query Frame = 0
Query: 1 MSHNGEAISPVPDLNTTILQAIQGMMEMMMEDRQERRAQQQRQEQTLQEDEGIV---VQE 60
MSH+GE + V D N ILQAIQGM+E+M E+RQERRAQQQR+ + QEDEG+ E
Sbjct: 1 MSHDGEEVPEVIDPNVAILQAIQGMLELMREERQERRAQQQREVRPFQEDEGMFDLNAHE 60
Query: 61 RQV----ERRWRGRNNHATIMQSRRMERVHEDRDGGVKLKIPPFCGTADSEAYLQWERKI 120
RQ+ R RGRNN A +MQ RRMERVHEDRDGGVKLKIPPF GTADSE YLQWERKI
Sbjct: 61 RQLGGRGNVRGRGRNNLANVMQPRRMERVHEDRDGGVKLKIPPFTGTADSETYLQWERKI 120
Query: 121 EHVFDCNTYSENKKMRLAIAEFTNYVGDWYQHLKSERRRKEEHPIETWEELKEAMRKRYV 180
EHVFDCNT+SENKKM+LAIAEFTNY +WY +LKSERRRKEE PIETWEELKEAMRKR+V
Sbjct: 121 EHVFDCNTFSENKKMKLAIAEFTNYASEWYHYLKSERRRKEEDPIETWEELKEAMRKRFV 180
Query: 181 PKHYERNLKTKLQGLRQETKSVAEYYLE-KTMMEIANVREVEEDIMYRFIGGLNREIAHL 240
PKHYER+LKTKLQ LRQ TKSVAEYY E +T++ A ++E EED M RF+GGLN+EIAHL
Sbjct: 181 PKHYERDLKTKLQSLRQGTKSVAEYYREMETLIGRARIQEDEEDTMSRFLGGLNQEIAHL 240
Query: 241 VDRNPPPNLEDMYHYALKIEDQLKEEKEHSKRYTSRTNTFSNSKTWNKDSFVDRNGSLSP 300
VDRNPP N+EDMYHYA+KIE QLKEEKE SKRY S+T+TFS+S TWNKD FV+RN S+
Sbjct: 241 VDRNPPYNMEDMYHYAIKIEAQLKEEKERSKRYVSKTHTFSSSNTWNKDGFVNRNESMQS 300
Query: 301 KEKFVAAKRVEAESSNGKKNETSKTVKEKSSSIQCWKCKGFGHMSKECVNKNVIVIRNGI 360
+ KFVAA++VE ESSN KK E SK V+EK+SSIQCWKCKGFGHMSK+C+NK V+V+RNG+
Sbjct: 301 RGKFVAAQKVETESSNTKKFEASKEVREKTSSIQCWKCKGFGHMSKDCINKRVMVVRNGV 360
Query: 361 LDSDDECEDHDSQLVEEI-AAYDDEYVEEGNFISLIT 389
+DS+DECE++D+QL EE DDEY+EEG+ ISLIT
Sbjct: 361 IDSEDECEENDAQLEEEYETPVDDEYIEEGSSISLIT 397
BLAST of CmaCh00G002450.1 vs. NCBI nr
Match:
TYK26105.1 (F15O4.13 [Cucumis melo var. makuwa])
HSP 1 Score: 541.6 bits (1394), Expect = 5.9e-150
Identity = 284/397 (71.54%), Postives = 331/397 (83.38%), Query Frame = 0
Query: 1 MSHNGEAISPVPDLNTTILQAIQGMMEMMMEDRQERRAQQQRQEQTLQEDEGIV---VQE 60
MSH+GE + V D N ILQAIQGM+E+M E+RQERRAQQQR+ + QEDEG+ E
Sbjct: 1 MSHDGEEVPEVIDPNVAILQAIQGMLELMREERQERRAQQQREVRPFQEDEGMFDLNAHE 60
Query: 61 RQV----ERRWRGRNNHATIMQSRRMERVHEDRDGGVKLKIPPFCGTADSEAYLQWERKI 120
RQ+ R RGRNN A +MQ RRMERVHEDRDGGVKLKIPPF GTADSE YLQWERKI
Sbjct: 61 RQLGGRGNVRGRGRNNLANVMQPRRMERVHEDRDGGVKLKIPPFTGTADSETYLQWERKI 120
Query: 121 EHVFDCNTYSENKKMRLAIAEFTNYVGDWYQHLKSERRRKEEHPIETWEELKEAMRKRYV 180
EHVFDCNT+SENKKM+LAIAEFTNY +WY +LKSERRRKEE PIETWEELKEAMRKR+V
Sbjct: 121 EHVFDCNTFSENKKMKLAIAEFTNYASEWYHYLKSERRRKEEDPIETWEELKEAMRKRFV 180
Query: 181 PKHYERNLKTKLQGLRQETKSVAEYYLE-KTMMEIANVREVEEDIMYRFIGGLNREIAHL 240
PKHYER+LKTKLQ LRQ TKSVAEYY E +T++ A ++E EED M RF+GGLN+EIAHL
Sbjct: 181 PKHYERDLKTKLQSLRQGTKSVAEYYREMETLIGRARIQEDEEDTMSRFLGGLNQEIAHL 240
Query: 241 VDRNPPPNLEDMYHYALKIEDQLKEEKEHSKRYTSRTNTFSNSKTWNKDSFVDRNGSLSP 300
VDRNPP N+EDMYHYA+KIE QLKEEKE SKRY S+T+TFS+S TWNKD FV+RN S+
Sbjct: 241 VDRNPPYNMEDMYHYAIKIEAQLKEEKERSKRYVSKTHTFSSSNTWNKDGFVNRNESMQS 300
Query: 301 KEKFVAAKRVEAESSNGKKNETSKTVKEKSSSIQCWKCKGFGHMSKECVNKNVIVIRNGI 360
+ KFVAA++VE ESSN KK E SK V+EK+SSIQCWKCKGFGHMSK+C+NK V+V+RNG+
Sbjct: 301 RGKFVAAQKVETESSNTKKFEASKEVREKTSSIQCWKCKGFGHMSKDCINKRVMVVRNGV 360
Query: 361 LDSDDECEDHDSQLVEEI-AAYDDEYVEEGNFISLIT 389
+DS+DECE++D+QL EE DDEY+EEG+ ISLIT
Sbjct: 361 IDSEDECEENDAQLEEEYETPVDDEYIEEGSSISLIT 397
BLAST of CmaCh00G002450.1 vs. NCBI nr
Match:
TYK02449.1 (F15O4.13 [Cucumis melo var. makuwa])
HSP 1 Score: 541.6 bits (1394), Expect = 5.9e-150
Identity = 284/397 (71.54%), Postives = 331/397 (83.38%), Query Frame = 0
Query: 1 MSHNGEAISPVPDLNTTILQAIQGMMEMMMEDRQERRAQQQRQEQTLQEDEGIV---VQE 60
MSH+GE + V D N ILQAIQGM+E+M E+RQERRAQQQR+ + QEDEG+ E
Sbjct: 1 MSHDGEEVPEVIDPNVAILQAIQGMLELMREERQERRAQQQREVRPFQEDEGMFDLNAHE 60
Query: 61 RQV----ERRWRGRNNHATIMQSRRMERVHEDRDGGVKLKIPPFCGTADSEAYLQWERKI 120
RQ+ R RGRNN A +MQ RRMERVHEDRDGGVKLKIPPF GTADSE YLQWERKI
Sbjct: 61 RQLGGRGNVRGRGRNNLANVMQPRRMERVHEDRDGGVKLKIPPFTGTADSETYLQWERKI 120
Query: 121 EHVFDCNTYSENKKMRLAIAEFTNYVGDWYQHLKSERRRKEEHPIETWEELKEAMRKRYV 180
EHVFDCNT+SENKKM+LAIAEFTNY +WY +LKSERRRKEE PIETWEELKEAMRKR+V
Sbjct: 121 EHVFDCNTFSENKKMKLAIAEFTNYASEWYHYLKSERRRKEEDPIETWEELKEAMRKRFV 180
Query: 181 PKHYERNLKTKLQGLRQETKSVAEYYLE-KTMMEIANVREVEEDIMYRFIGGLNREIAHL 240
PKHYER+LKTKLQ LRQ TKSVAEYY E +T++ A ++E EED M RF+GGLN+EIAHL
Sbjct: 181 PKHYERDLKTKLQSLRQGTKSVAEYYREMETLIGRARIQEDEEDTMSRFLGGLNQEIAHL 240
Query: 241 VDRNPPPNLEDMYHYALKIEDQLKEEKEHSKRYTSRTNTFSNSKTWNKDSFVDRNGSLSP 300
VDRNPP N+EDMYHYA+KIE QLKEEKE SKRY S+T+TFS+S TWNKD FV+RN S+
Sbjct: 241 VDRNPPYNMEDMYHYAIKIEAQLKEEKERSKRYVSKTHTFSSSNTWNKDGFVNRNESMQS 300
Query: 301 KEKFVAAKRVEAESSNGKKNETSKTVKEKSSSIQCWKCKGFGHMSKECVNKNVIVIRNGI 360
+ KFVAA++VE ESSN KK E SK V+EK+SSIQCWKCKGFGHMSK+C+NK V+V+RNG+
Sbjct: 301 RGKFVAAQKVETESSNTKKFEASKEVREKTSSIQCWKCKGFGHMSKDCINKRVMVVRNGV 360
Query: 361 LDSDDECEDHDSQLVEEI-AAYDDEYVEEGNFISLIT 389
+DS+DECE++D+QL EE DDEY+EEG+ ISLIT
Sbjct: 361 IDSEDECEENDAQLEEEYETPVDDEYIEEGSSISLIT 397
BLAST of CmaCh00G002450.1 vs. NCBI nr
Match:
TYK11702.1 (F15O4.13 [Cucumis melo var. makuwa])
HSP 1 Score: 541.6 bits (1394), Expect = 5.9e-150
Identity = 284/397 (71.54%), Postives = 331/397 (83.38%), Query Frame = 0
Query: 1 MSHNGEAISPVPDLNTTILQAIQGMMEMMMEDRQERRAQQQRQEQTLQEDEGIV---VQE 60
MSH+GE + V D N ILQAIQGM+E+M E+RQERRAQQQR+ + QEDEG+ E
Sbjct: 1 MSHDGEEVPEVIDPNVAILQAIQGMLELMREERQERRAQQQREVRPFQEDEGMFDLNAHE 60
Query: 61 RQV----ERRWRGRNNHATIMQSRRMERVHEDRDGGVKLKIPPFCGTADSEAYLQWERKI 120
RQ+ R RGRNN A +MQ RRMERVHEDRDGGVKLKIPPF GTADSE YLQWERKI
Sbjct: 61 RQLGGRGNVRGRGRNNLANVMQPRRMERVHEDRDGGVKLKIPPFTGTADSETYLQWERKI 120
Query: 121 EHVFDCNTYSENKKMRLAIAEFTNYVGDWYQHLKSERRRKEEHPIETWEELKEAMRKRYV 180
EHVFDCNT+SENKKM+LAIAEFTNY +WY +LKSERRRKEE PIETWEELKEAMRKR+V
Sbjct: 121 EHVFDCNTFSENKKMKLAIAEFTNYASEWYHYLKSERRRKEEDPIETWEELKEAMRKRFV 180
Query: 181 PKHYERNLKTKLQGLRQETKSVAEYYLE-KTMMEIANVREVEEDIMYRFIGGLNREIAHL 240
PKHYER+LKTKLQ LRQ TKSVAEYY E +T++ A ++E EED M RF+GGLN+EIAHL
Sbjct: 181 PKHYERDLKTKLQSLRQGTKSVAEYYREMETLIGRARIQEDEEDTMSRFLGGLNQEIAHL 240
Query: 241 VDRNPPPNLEDMYHYALKIEDQLKEEKEHSKRYTSRTNTFSNSKTWNKDSFVDRNGSLSP 300
VDRNPP N+EDMYHYA+KIE QLKEEKE SKRY S+T+TFS+S TWNKD FV+RN S+
Sbjct: 241 VDRNPPYNMEDMYHYAIKIEAQLKEEKERSKRYVSKTHTFSSSNTWNKDGFVNRNESMQS 300
Query: 301 KEKFVAAKRVEAESSNGKKNETSKTVKEKSSSIQCWKCKGFGHMSKECVNKNVIVIRNGI 360
+ KFVAA++VE ESSN KK E SK V+EK+SSIQCWKCKGFGHMSK+C+NK V+V+RNG+
Sbjct: 301 RGKFVAAQKVETESSNTKKFEASKEVREKTSSIQCWKCKGFGHMSKDCINKRVMVVRNGV 360
Query: 361 LDSDDECEDHDSQLVEEI-AAYDDEYVEEGNFISLIT 389
+DS+DECE++D+QL EE DDEY+EEG+ ISLIT
Sbjct: 361 IDSEDECEENDAQLEEEYETPVDDEYIEEGSSISLIT 397
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1EVI6 | 1.1e-162 | 80.98 | LOW QUALITY PROTEIN: uncharacterized protein LOC111438459 OS=Cucurbita moschata ... | [more] |
A0A5D3DRJ1 | 2.8e-150 | 71.54 | F15O4.13 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold111G00130 PE=4 ... | [more] |
A0A5D3C3D3 | 2.8e-150 | 71.54 | F15O4.13 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold143G001490 PE=4... | [more] |
A0A5D3CK70 | 2.8e-150 | 71.54 | F15O4.13 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold304G00110 PE=4 ... | [more] |
A0A5D3BWE8 | 2.8e-150 | 71.54 | F15O4.13 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1738G00600 PE=4... | [more] |
Match Name | E-value | Identity | Description | |
XP_022932136.1 | 2.3e-162 | 80.98 | LOW QUALITY PROTEIN: uncharacterized protein LOC111438459, partial [Cucurbita mo... | [more] |
TYK22420.1 | 5.9e-150 | 71.54 | Transposon Ty3-I Gag-Pol polyprotein [Cucumis melo var. makuwa] | [more] |
TYK26105.1 | 5.9e-150 | 71.54 | F15O4.13 [Cucumis melo var. makuwa] | [more] |
TYK02449.1 | 5.9e-150 | 71.54 | F15O4.13 [Cucumis melo var. makuwa] | [more] |
TYK11702.1 | 5.9e-150 | 71.54 | F15O4.13 [Cucumis melo var. makuwa] | [more] |
Match Name | E-value | Identity | Description | |