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CmUC10G197870.1 (mRNA) Watermelon (USVL531) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGCCCTTAGGCACGGTCATACATAACATAGAAATCACACTTGGGAAGGGGGGACAATTAGCTAGAGTAGCAGGTGCTATAGCGAAACTGATTGCAAAAGAGGGGAAATCGGCCACATTAAAATTACCTTATGGGGAGGTCCGTTTGATATCCAAAAATTGCCCAGCAACAGTTGGACAAGTGGGGAATGTTGGAGTAAACCAGAAAAGTTTGGGTAGAGCCGGATCTAAATGTTGGCTAGGTAAGCGTCCTGTAGTAAGAGGAGTAGTTATGAACCTTGTAGAACATCCACATGGGGGTGGTGAAGGGAGGGCCCCAATTGGTAGAAAAAAACCCGCAACCCTTTGGGGTTATCCTGCACTTGGAAGAAGAAGTAGAAAAAGAAATAAATATAGTGATAATTTGATTCTTCGTCGCCGTAGTAAATAA ATGCCCTTAGGCACGGTCATACATAACATAGAAATCACACTTGGGAAGGGGGGACAATTAGCTAGAGTAGCAGGTGCTATAGCGAAACTGATTGCAAAAGAGGGGAAATCGGCCACATTAAAATTACCTTATGGGGAGGTCCGTTTGATATCCAAAAATTGCCCAGCAACAGTTGGACAAGTGGGGAATGTTGGAGTAAACCAGAAAAGTTTGGGTAGAGCCGGATCTAAATGTTGGCTAGGTAAGCGTCCTGTAGTAAGAGGAGTAGTTATGAACCTTGTAGAACATCCACATGGGGGTGGTGAAGGGAGGGCCCCAATTGGTAGAAAAAAACCCGCAACCCTTTGGGGTTATCCTGCACTTGGAAGAAGAAGTAGAAAAAGAAATAAATATAGTGATAATTTGATTCTTCGTCGCCGTAGTAAATAA ATGCCCTTAGGCACGGTCATACATAACATAGAAATCACACTTGGGAAGGGGGGACAATTAGCTAGAGTAGCAGGTGCTATAGCGAAACTGATTGCAAAAGAGGGGAAATCGGCCACATTAAAATTACCTTATGGGGAGGTCCGTTTGATATCCAAAAATTGCCCAGCAACAGTTGGACAAGTGGGGAATGTTGGAGTAAACCAGAAAAGTTTGGGTAGAGCCGGATCTAAATGTTGGCTAGGTAAGCGTCCTGTAGTAAGAGGAGTAGTTATGAACCTTGTAGAACATCCACATGGGGGTGGTGAAGGGAGGGCCCCAATTGGTAGAAAAAAACCCGCAACCCTTTGGGGTTATCCTGCACTTGGAAGAAGAAGTAGAAAAAGAAATAAATATAGTGATAATTTGATTCTTCGTCGCCGTAGTAAATAA MPLGTVIHNIEITLGKGGQLARVAGAIAKLIAKEGKSATLKLPYGEVRLISKNCPATVGQVGNVGVNQKSLGRAGSKCWLGKRPVVRGVVMNLVEHPHGGGEGRAPIGRKKPATLWGYPALGRRSRKRNKYSDNLILRRRSK Homology
BLAST of CmUC10G197870.1 vs. NCBI nr
Match: TYI93527.1 (hypothetical protein E1A91_D02G141400v1 [Gossypium mustelinum]) HSP 1 Score: 269.2 bits (687), Expect = 2.0e-68 Identity = 133/142 (93.66%), Postives = 137/142 (96.48%), Query Frame = 0
BLAST of CmUC10G197870.1 vs. NCBI nr
Match: QCW93768.1 (ribosomal protein L2 [Erismadelphus exsul]) HSP 1 Score: 268.9 bits (686), Expect = 2.6e-68 Identity = 134/142 (94.37%), Postives = 136/142 (95.77%), Query Frame = 0
BLAST of CmUC10G197870.1 vs. NCBI nr
Match: YP_009659789.1 (ribosomal protein L2 [Lythrum salicaria] >YP_009659811.1 ribosomal protein L2 [Lythrum salicaria] >QCR99597.1 ribosomal protein L2 [Lythrum salicaria] >QCR99619.1 ribosomal protein L2 [Lythrum salicaria]) HSP 1 Score: 268.5 bits (685), Expect = 3.4e-68 Identity = 134/142 (94.37%), Postives = 136/142 (95.77%), Query Frame = 0
BLAST of CmUC10G197870.1 vs. NCBI nr
Match: YP_009669693.1 (ribosomal protein L2 [Qualea grandiflora] >YP_009669714.1 ribosomal protein L2 [Qualea grandiflora] >YP_009669777.1 ribosomal protein L2 [Ruizterania albiflora] >YP_009669798.1 ribosomal protein L2 [Ruizterania albiflora] >QCW94978.1 ribosomal protein L2 [Qualea grandiflora] >QCW94999.1 ribosomal protein L2 [Qualea grandiflora] >QCW95062.1 ribosomal protein L2 [Ruizterania albiflora] >QCW95083.1 ribosomal protein L2 [Ruizterania albiflora]) HSP 1 Score: 268.5 bits (685), Expect = 3.4e-68 Identity = 134/142 (94.37%), Postives = 136/142 (95.77%), Query Frame = 0
BLAST of CmUC10G197870.1 vs. NCBI nr
Match: YP_009130362.1 (ribosomal protein L2 [Quercus aliena] >YP_009132878.1 ribosomal protein L2 [Quercus spinosa] >YP_009133093.1 ribosomal protein L2 [Quercus aquifolioides] >QSJ48282.1 ribosomal protein L2 [Castanopsis sclerophylla] >AJW60188.1 ribosomal protein L2 [Quercus aliena] >AKA67005.1 ribosomal protein L2 [Quercus spinosa] >AKC05507.1 ribosomal protein L2 [Quercus aquifolioides] >QSJ48304.1 ribosomal protein L2 [Castanopsis sclerophylla]) HSP 1 Score: 268.5 bits (685), Expect = 3.4e-68 Identity = 134/142 (94.37%), Postives = 136/142 (95.77%), Query Frame = 0
BLAST of CmUC10G197870.1 vs. ExPASy Swiss-Prot
Match: B1A976 (50S ribosomal protein L2, chloroplastic OS=Carica papaya OX=3649 GN=rpl2-A PE=3 SV=1) HSP 1 Score: 268.5 bits (685), Expect = 4.4e-71 Identity = 134/142 (94.37%), Postives = 136/142 (95.77%), Query Frame = 0
BLAST of CmUC10G197870.1 vs. ExPASy Swiss-Prot
Match: Q2L944 (50S ribosomal protein L2, chloroplastic OS=Gossypium hirsutum OX=3635 GN=rpl2-A PE=3 SV=1) HSP 1 Score: 267.3 bits (682), Expect = 9.8e-71 Identity = 133/142 (93.66%), Postives = 136/142 (95.77%), Query Frame = 0
BLAST of CmUC10G197870.1 vs. ExPASy Swiss-Prot
Match: Q4VZK5 (50S ribosomal protein L2, chloroplastic OS=Cucumis sativus OX=3659 GN=rpl2-A PE=3 SV=1) HSP 1 Score: 266.9 bits (681), Expect = 1.3e-70 Identity = 133/142 (93.66%), Postives = 135/142 (95.07%), Query Frame = 0
BLAST of CmUC10G197870.1 vs. ExPASy Swiss-Prot
Match: B1NWJ1 (50S ribosomal protein L2, chloroplastic OS=Manihot esculenta OX=3983 GN=rpl2-A PE=3 SV=1) HSP 1 Score: 266.9 bits (681), Expect = 1.3e-70 Identity = 133/142 (93.66%), Postives = 135/142 (95.07%), Query Frame = 0
BLAST of CmUC10G197870.1 vs. ExPASy Swiss-Prot
Match: Q0ZIX7 (50S ribosomal protein L2, chloroplastic OS=Vitis vinifera OX=29760 GN=rpl2-A PE=3 SV=1) HSP 1 Score: 266.9 bits (681), Expect = 1.3e-70 Identity = 133/142 (93.66%), Postives = 135/142 (95.07%), Query Frame = 0
BLAST of CmUC10G197870.1 vs. ExPASy TrEMBL
Match: A0A5D2VVV2 (50S ribosomal protein L2, chloroplastic OS=Gossypium mustelinum OX=34275 GN=E1A91_D02G141400v1 PE=3 SV=1) HSP 1 Score: 269.2 bits (687), Expect = 9.5e-69 Identity = 133/142 (93.66%), Postives = 137/142 (96.48%), Query Frame = 0
BLAST of CmUC10G197870.1 vs. ExPASy TrEMBL
Match: A0A4Y5PNW7 (50S ribosomal protein L2, chloroplastic OS=Erismadelphus exsul OX=1317841 GN=rpl2 PE=3 SV=1) HSP 1 Score: 268.9 bits (686), Expect = 1.2e-68 Identity = 134/142 (94.37%), Postives = 136/142 (95.77%), Query Frame = 0
BLAST of CmUC10G197870.1 vs. ExPASy TrEMBL
Match: A0A6G9INX3 (50S ribosomal protein L2, chloroplastic OS=Castanopsis fargesii OX=167386 GN=rpl2 PE=3 SV=1) HSP 1 Score: 268.5 bits (685), Expect = 1.6e-68 Identity = 134/142 (94.37%), Postives = 136/142 (95.77%), Query Frame = 0
BLAST of CmUC10G197870.1 vs. ExPASy TrEMBL
Match: A0A5P8HA57 (50S ribosomal protein L2, chloroplastic OS=Quercus stewardiana OX=1497783 GN=rpl2 PE=3 SV=1) HSP 1 Score: 268.5 bits (685), Expect = 1.6e-68 Identity = 134/142 (94.37%), Postives = 136/142 (95.77%), Query Frame = 0
BLAST of CmUC10G197870.1 vs. ExPASy TrEMBL
Match: A0A7S6ZNY8 (Ribosomal protein L2 OS=Castanopsis mekongensis OX=1679275 GN=rpl2 PE=4 SV=1) HSP 1 Score: 268.5 bits (685), Expect = 1.6e-68 Identity = 134/142 (94.37%), Postives = 136/142 (95.77%), Query Frame = 0
BLAST of CmUC10G197870.1 vs. TAIR 10
Match: ATCG00830.1 (ribosomal protein L2 ) HSP 1 Score: 258.5 bits (659), Expect = 3.2e-69 Identity = 128/142 (90.14%), Postives = 133/142 (93.66%), Query Frame = 0
BLAST of CmUC10G197870.1 vs. TAIR 10
Match: ATCG01310.1 (ribosomal protein L2 ) HSP 1 Score: 258.5 bits (659), Expect = 3.2e-69 Identity = 128/142 (90.14%), Postives = 133/142 (93.66%), Query Frame = 0
BLAST of CmUC10G197870.1 vs. TAIR 10
Match: AT2G44065.1 (Ribosomal protein L2 family ) HSP 1 Score: 107.8 bits (268), Expect = 7.1e-24 Identity = 56/126 (44.44%), Postives = 74/126 (58.73%), Query Frame = 0
BLAST of CmUC10G197870.1 vs. TAIR 10
Match: AT2G44065.2 (Ribosomal protein L2 family ) HSP 1 Score: 107.8 bits (268), Expect = 7.1e-24 Identity = 56/126 (44.44%), Postives = 74/126 (58.73%), Query Frame = 0
BLAST of CmUC10G197870.1 vs. TAIR 10
Match: AT3G51190.1 (Ribosomal protein L2 family ) HSP 1 Score: 81.3 bits (199), Expect = 7.1e-16 Identity = 49/112 (43.75%), Postives = 64/112 (57.14%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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