Cla97C11G217945.1 (mRNA) Watermelon (97103) v2.5

Overview


Name	Cla97C11G217945.1
Type	mRNA
Organism	Citrullus lanatus subsp. vulgaris cv. 97103 (Watermelon (97103) v2.5)
Description	transcription factor bHLH146-like
Location	Cla97Chr11: 23405617 .. 23406487 (+)
Sequence length	871
RNA-Seq Expression	Cla97C11G217945.1
Synteny	Cla97C11G217945.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAAAAAAAAAAAAAGATTTTTTGTGAATGGGAAGGCAAATTGTGAGAAAAGGATCAAGAAGGGTATTTTCCCTAGAACCGAACAAAGTTGCATACACCATGTTTGCAAGAAACTATGTCAAATATTTGATGACATCTTTAGTTAAAATCTCTCATCATCAACAACAAAAAAATTTTCAGAAACTTGTGAAGTTTGAAGTTGACATGGCAATGGCTCTATCAGCAAGTGAATTTGCTTGGGGAATTGCTCTAAAAAAGAAGCTTCTTCAAAGAGAAGTTGGCAATGGCAATGAAAATGGTTTTGATTTCTCTCTCCAAACAGTCAAATTTTCTCAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGAAGATGGAAAATGGGTTGATGAAGCTGAGAAAAATCATACCAGGTGGTAGTGATTTTAATGTTGGAGGTTTGGAAGAAGATGATTTGTTGAAACAAACTGAAAGTTATGTAAAATGTCTTGAGTTGCAAGTGAATGTTCTTAGAGGTTTGGTTGAAACAAACACATTTTAATTTTCTTTTTTCTTTTTGGGACATTTCTATGAGGAAAAGAAAAATCATTTTAGCAATATATATGAATTTTCTCCTACCAAAAATCTAATGTACTATATCTAGTTTCAAATTCTTTTTATTTTCCAACTAATTAAATCTAAAAATTGTTTATCGAATGATTATGAGCCATTTAATACAATTTACGTGGTTAAAATGAGCATAATTTAATGATAATTGAATGAACTACCTTCTTTGAGGTTGAAGATTTAAAATGACAATAAT

mRNA sequence

AAAAAAAAAAAAAAAAGATTTTTTGTGAATGGGAAGGCAAATTGTGAGAAAAGGATCAAGAAGGGTATTTTCCCTAGAACCGAACAAAGTTGCATACACCATGTTTGCAAGAAACTATGTCAAATATTTGATGACATCTTTAGTTAAAATCTCTCATCATCAACAACAAAAAAATTTTCAGAAACTTGTGAAGTTTGAAGTTGACATGGCAATGGCTCTATCAGCAAGTGAATTTGCTTGGGGAATTGCTCTAAAAAAGAAGCTTCTTCAAAGAGAAGTTGGCAATGGCAATGAAAATGGTTTTGATTTCTCTCTCCAAACAGTCAAATTTTCTCAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGAAGATGGAAAATGGGTTGATGAAGCTGAGAAAAATCATACCAGGTGGTAGTGATTTTAATGTTGGAGGTTTGGAAGAAGATGATTTGTTGAAACAAACTGAAAGTTATGTAAAATGTCTTGAGTTGCAAGTGAATGTTCTTAGAGGTTTGGTTGAAACAAACACATTTTAATTTTCTTTTTTCTTTTTGGGACATTTCTATGAGGAAAAGAAAAATCATTTTAGCAATATATATGAATTTTCTCCTACCAAAAATCTAATGTACTATATCTAGTTTCAAATTCTTTTTATTTTCCAACTAATTAAATCTAAAAATTGTTTATCGAATGATTATGAGCCATTTAATACAATTTACGTGGTTAAAATGAGCATAATTTAATGATAATTGAATGAACTACCTTCTTTGAGGTTGAAGATTTAAAATGACAATAAT

Coding sequence (CDS)

ATGGGAAGGCAAATTGTGAGAAAAGGATCAAGAAGGGTATTTTCCCTAGAACCGAACAAAGTTGCATACACCATGTTTGCAAGAAACTATGTCAAATATTTGATGACATCTTTAGTTAAAATCTCTCATCATCAACAACAAAAAAATTTTCAGAAACTTGTGAAGTTTGAAGTTGACATGGCAATGGCTCTATCAGCAAGTGAATTTGCTTGGGGAATTGCTCTAAAAAAGAAGCTTCTTCAAAGAGAAGTTGGCAATGGCAATGAAAATGGTTTTGATTTCTCTCTCCAAACAGTCAAATTTTCTCAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGAAGATGGAAAATGGGTTGATGAAGCTGAGAAAAATCATACCAGGTGGTAGTGATTTTAATGTTGGAGGTTTGGAAGAAGATGATTTGTTGAAACAAACTGAAAGTTATGTAAAATGTCTTGAGTTGCAAGTGAATGTTCTTAGAGGTTTGGTTGAAACAAACACATTTTAA

Protein sequence

MGRQIVRKGSRRVFSLEPNKVAYTMFARNYVKYLMTSLVKISHHQQQKNFQKLVKFEVDMAMALSASEFAWGIALKKKLLQREVGNGNENGFDFSLQTVKFSQEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEKMENGLMKLRKIIPGGSDFNVGGLEEDDLLKQTESYVKCLELQVNVLRGLVETNTF

Homology

[Close]

BLAST of Cla97C11G217945.1 vs. NCBI nr
Match: XP_038877916.1 (transcription factor bHLH146-like [Benincasa hispida])

HSP 1 Score: 241.5 bits (615), Expect = 6.0e-60
Identity = 150/200 (75.00%), Postives = 161/200 (80.50%), Query Frame = 0


Query: 1   MGRQIVRKGSRRVFSLEPNKVAYTMFARNYVKYLMTSLVKISHH------QQQKNFQKLV 60
           MGRQIVRKGSRRVFSLEPNKVAYTMFARNYVK+LMTSLVKISHH      QQ++NFQK V
Sbjct: 1   MGRQIVRKGSRRVFSLEPNKVAYTMFARNYVKHLMTSLVKISHHHHQHHQQQEQNFQKFV 60

Query: 61  KFEVDMAMALSAS-EFAWGIALKKKLLQREVGNGNENGFDFSLQTVKFSQEEEEEEEEEE 120
           KFEVDMAMA SAS +FAWGIALKKKLLQR+   GNEN FDFSLQTVKFSQ          
Sbjct: 61  KFEVDMAMAQSASDQFAWGIALKKKLLQRD-QVGNENDFDFSLQTVKFSQ---------- 120

Query: 121 EEEEEEEEEEEEEEEEEEEEEEEEKMENGLMKLRKIIPGGSDFNVGGLEEDDLLKQTESY 180
                    E   +EEEEE EEE+KME+GLMKLRKIIPGG+DFN+   E+DDLLKQTESY
Sbjct: 121 ---------ENLGKEEEEEAEEEKKMEHGLMKLRKIIPGGADFNI---EDDDLLKQTESY 177

Query: 181 VKCLELQVNVLRGLVETNTF 194
           VKCLELQVNVLRGLVETNTF
Sbjct: 181 VKCLELQVNVLRGLVETNTF 177

[Close]

BLAST of Cla97C11G217945.1 vs. NCBI nr
Match: XP_016901419.1 (PREDICTED: uncharacterized protein At4g30180 [Cucumis melo])

HSP 1 Score: 237.7 bits (605), Expect = 8.6e-59
Identity = 152/201 (75.62%), Postives = 167/201 (83.08%), Query Frame = 0


Query: 1   MGRQIVRKGSRRVFSLEPNKVAYTMFARNYVKYLMTSLVKISHHQQQKNFQKLVKFEVDM 60
           M R+IVRKG RRVFS+EPNKVAYTMFARNYVK+LMTSLVKISH QQQ+NFQKLV+FEVDM
Sbjct: 1   MVRKIVRKG-RRVFSIEPNKVAYTMFARNYVKHLMTSLVKISHQQQQQNFQKLVRFEVDM 60

Query: 61  AMALSASEFAWGIALKKKLLQRE-----VGNGNENGFDFSLQTVKFSQEEEEEEEEEEEE 120
           AMA SASEF+WGIALKKKLLQR+     +GNG+ENGFDFSLQT+K    +    EEE+  
Sbjct: 61  AMAQSASEFSWGIALKKKLLQRDDQQEVLGNGSENGFDFSLQTMKKISHKNLGNEEEDHH 120

Query: 121 EEEEEEEEEEEEEEEEEEEEEEKMENGLMKLRKIIPGGSDFNVGGL---EEDDLLKQTES 180
           E+EEEEEEEEEEE          MENGLMKLRKIIPGG DF++GG    EEDDLLKQTES
Sbjct: 121 EDEEEEEEEEEEE----------MENGLMKLRKIIPGGDDFSIGGNNLDEEDDLLKQTES 180

Query: 181 YVKCLELQVNVLRGLVETNTF 194
           YVKCLELQVNVLRGLVETNTF
Sbjct: 181 YVKCLELQVNVLRGLVETNTF 190

[Close]

BLAST of Cla97C11G217945.1 vs. NCBI nr
Match: XP_011648935.1 (transcription factor bHLH146 [Cucumis sativus] >KGN61154.1 hypothetical protein Csa_021305 [Cucumis sativus])

HSP 1 Score: 234.2 bits (596), Expect = 9.5e-58
Identity = 147/198 (74.24%), Postives = 164/198 (82.83%), Query Frame = 0


Query: 1   MGRQIVRKGSRRVFSLEPNKVAYTMFARNYVKYLMTSLVKISHHQQQKNFQKLVKFEVDM 60
           M R++VRKG RRVFS+EP+KVAYTMF RNYVK+LMTSLVKISH QQQ+NF+KLVKFEVDM
Sbjct: 1   MVRKMVRKG-RRVFSIEPSKVAYTMFERNYVKHLMTSLVKISHQQQQQNFRKLVKFEVDM 60

Query: 61  AMALSASEFAWGIALKKKLLQRE---VGNGNENGFDFSLQTVKFSQEEEEEEEEEEEEEE 120
           AMA SASEF+WGIALKKKLLQR+   +GNGNENGFDFS+QTVK + +E    EEE+   E
Sbjct: 61  AMAQSASEFSWGIALKKKLLQRDQQVLGNGNENGFDFSVQTVKKTSQENLGNEEEDHHHE 120

Query: 121 EEEEEEEEEEEEEEEEEEEEKMENGLMKLRKIIPGGSDFNVGGL--EEDDLLKQTESYVK 180
           EEEEEEEE             MENGLMKLRKIIPGG +F++GG   EEDDLLKQTESYVK
Sbjct: 121 EEEEEEEE-------------MENGLMKLRKIIPGGDNFSIGGNLDEEDDLLKQTESYVK 180

Query: 181 CLELQVNVLRGLVETNTF 194
           CLELQVNVLRGLVETNTF
Sbjct: 181 CLELQVNVLRGLVETNTF 184

[Close]

BLAST of Cla97C11G217945.1 vs. NCBI nr
Match: XP_023538247.1 (transcription factor bHLH146-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 218.0 bits (554), Expect = 7.1e-53
Identity = 138/195 (70.77%), Postives = 151/195 (77.44%), Query Frame = 0


Query: 1   MGRQIVRKGSRRVFSLEPNKVAYTMFARNYVKYLMTSLVKISHHQQQ---KNFQKLVKFE 60
           MGRQI+RK  +RV SLEPNK+AYTMFARNYVKYLMTSL KISHH QQ   +NFQKLVKFE
Sbjct: 1   MGRQILRK-RKRVLSLEPNKLAYTMFARNYVKYLMTSLPKISHHHQQHQEQNFQKLVKFE 60

Query: 61  VDMAMALSASEFAWGIALKKKLLQREVGNGNENGFDFSLQTVKFSQEEEEEEEEEEEEEE 120
           VDMAMA SA+EF+WG ALKKKLLQRE GNG+ NGF FSLQTVKFSQ              
Sbjct: 61  VDMAMAQSATEFSWGNALKKKLLQREDGNGS-NGFGFSLQTVKFSQ-------------- 120

Query: 121 EEEEEEEEEEEEEEEEEEEEKMENGLMKLRKIIPGGSDFNVGGLEEDDLLKQTESYVKCL 180
               E  E E EE EE +E K+ENGLMKLRKI+PGGS+   G LEEDDL KQTESY+KCL
Sbjct: 121 ----ENLEREHEEHEERKEPKIENGLMKLRKIVPGGSN---GELEEDDLFKQTESYIKCL 172

Query: 181 ELQVNVLRGLVETNT 193
           ELQVNVLR LV+TNT
Sbjct: 181 ELQVNVLRCLVDTNT 172

[Close]

BLAST of Cla97C11G217945.1 vs. NCBI nr
Match: XP_022938205.1 (transcription factor bHLH146-like [Cucurbita moschata])

HSP 1 Score: 213.8 bits (543), Expect = 1.3e-51
Identity = 138/195 (70.77%), Postives = 152/195 (77.95%), Query Frame = 0


Query: 1   MGRQIVRKGSRRVFSLEPNKVAYTMFARNYVKYLMTSLVKISHHQQQ---KNFQKLVKFE 60
           MGRQI+RK  +RV SLEPNK+AYTMFARNYVKYLMTSL KISHH QQ   +NFQKLVKFE
Sbjct: 1   MGRQILRK-RKRVLSLEPNKLAYTMFARNYVKYLMTSLPKISHHHQQHQEQNFQKLVKFE 60

Query: 61  VDMAMALSASEFAWGIALKKKLLQREVGNGNENGFDFSLQTVKFSQEEEEEEEEEEEEEE 120
           VDMAMA SA+EF+WG ALKKKLLQRE GNG+ NGF  SLQ VKFS+              
Sbjct: 61  VDMAMAQSATEFSWGNALKKKLLQREDGNGS-NGFGLSLQRVKFSR-------------- 120

Query: 121 EEEEEEEEEEEEEEEEEEEEKMENGLMKLRKIIPGGSDFNVGGLEEDDLLKQTESYVKCL 180
            E  E E+EE EE EE EE K+ENGLMKLRKI+PGGS+   G LEEDDL KQTESY+KCL
Sbjct: 121 -ENLEREDEEHEEREEHEERKIENGLMKLRKIVPGGSN---GELEEDDLFKQTESYIKCL 175

Query: 181 ELQVNVLRGLVETNT 193
           ELQVNVLR LV+TNT
Sbjct: 181 ELQVNVLRCLVDTNT 175

[Close]

BLAST of Cla97C11G217945.1 vs. ExPASy Swiss-Prot
Match: Q9SUM5 (Transcription factor bHLH146 OS=Arabidopsis thaliana OX=3702 GN=BHLH146 PE=2 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 9.7e-13
Identity = 61/192 (31.77%), Postives = 98/192 (51.04%), Query Frame = 0


Query: 1   MGRQIVRKGSRRVFSLEPNKVAYTMFARNYVKYLMTSLVKISHHQQQKNFQKLVKFEVDM 60
           M RQI+ +  +RVFSLEPNK    +F R Y  +L+ +L K+  +  + + ++ VK EVDM
Sbjct: 1   MERQIINR-KKRVFSLEPNKNPSAVFTRKYTSHLVPALKKL--NMNKNSSKQTVKHEVDM 60

Query: 61  AMALSASEFAWGIALKKKLLQREVGNGNENGFDFSLQTVKFSQEEEEEEEEEEEEEEEEE 120
           A+ALSA EFAW   L +KL          +     ++ +                     
Sbjct: 61  ALALSAQEFAWSRFLLQKLSSSSNPTTTTSSSSDGIRIL--------------------- 120

Query: 121 EEEEEEEEEEEEEEEEEKMENGLMKLRKIIPGGSDFNVGGLEEDDLLKQTESYVKCLELQ 180
                E  ++E   EE  +E  L +L+K++PGG + NV     +++L +  +Y+KCLELQ
Sbjct: 121 -----ERPDKEGGNEEGGIEERLRELKKLLPGGEEMNV-----EEMLSEIGNYIKCLELQ 158

Query: 181 VNVLRGLVETNT 193
              L+ +V+ +T
Sbjct: 181 TIALKSIVQDST 158

[Close]

BLAST of Cla97C11G217945.1 vs. ExPASy TrEMBL
Match: A0A1S4DZN3 (uncharacterized protein At4g30180 OS=Cucumis melo OX=3656 GN=LOC103492789 PE=4 SV=1)

HSP 1 Score: 237.7 bits (605), Expect = 4.2e-59
Identity = 152/201 (75.62%), Postives = 167/201 (83.08%), Query Frame = 0


Query: 1   MGRQIVRKGSRRVFSLEPNKVAYTMFARNYVKYLMTSLVKISHHQQQKNFQKLVKFEVDM 60
           M R+IVRKG RRVFS+EPNKVAYTMFARNYVK+LMTSLVKISH QQQ+NFQKLV+FEVDM
Sbjct: 1   MVRKIVRKG-RRVFSIEPNKVAYTMFARNYVKHLMTSLVKISHQQQQQNFQKLVRFEVDM 60

Query: 61  AMALSASEFAWGIALKKKLLQRE-----VGNGNENGFDFSLQTVKFSQEEEEEEEEEEEE 120
           AMA SASEF+WGIALKKKLLQR+     +GNG+ENGFDFSLQT+K    +    EEE+  
Sbjct: 61  AMAQSASEFSWGIALKKKLLQRDDQQEVLGNGSENGFDFSLQTMKKISHKNLGNEEEDHH 120

Query: 121 EEEEEEEEEEEEEEEEEEEEEEKMENGLMKLRKIIPGGSDFNVGGL---EEDDLLKQTES 180
           E+EEEEEEEEEEE          MENGLMKLRKIIPGG DF++GG    EEDDLLKQTES
Sbjct: 121 EDEEEEEEEEEEE----------MENGLMKLRKIIPGGDDFSIGGNNLDEEDDLLKQTES 180

Query: 181 YVKCLELQVNVLRGLVETNTF 194
           YVKCLELQVNVLRGLVETNTF
Sbjct: 181 YVKCLELQVNVLRGLVETNTF 190

[Close]

BLAST of Cla97C11G217945.1 vs. ExPASy TrEMBL
Match: A0A0A0LJA7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G060350 PE=4 SV=1)

HSP 1 Score: 234.2 bits (596), Expect = 4.6e-58
Identity = 147/198 (74.24%), Postives = 164/198 (82.83%), Query Frame = 0


Query: 1   MGRQIVRKGSRRVFSLEPNKVAYTMFARNYVKYLMTSLVKISHHQQQKNFQKLVKFEVDM 60
           M R++VRKG RRVFS+EP+KVAYTMF RNYVK+LMTSLVKISH QQQ+NF+KLVKFEVDM
Sbjct: 1   MVRKMVRKG-RRVFSIEPSKVAYTMFERNYVKHLMTSLVKISHQQQQQNFRKLVKFEVDM 60

Query: 61  AMALSASEFAWGIALKKKLLQRE---VGNGNENGFDFSLQTVKFSQEEEEEEEEEEEEEE 120
           AMA SASEF+WGIALKKKLLQR+   +GNGNENGFDFS+QTVK + +E    EEE+   E
Sbjct: 61  AMAQSASEFSWGIALKKKLLQRDQQVLGNGNENGFDFSVQTVKKTSQENLGNEEEDHHHE 120

Query: 121 EEEEEEEEEEEEEEEEEEEEKMENGLMKLRKIIPGGSDFNVGGL--EEDDLLKQTESYVK 180
           EEEEEEEE             MENGLMKLRKIIPGG +F++GG   EEDDLLKQTESYVK
Sbjct: 121 EEEEEEEE-------------MENGLMKLRKIIPGGDNFSIGGNLDEEDDLLKQTESYVK 180

Query: 181 CLELQVNVLRGLVETNTF 194
           CLELQVNVLRGLVETNTF
Sbjct: 181 CLELQVNVLRGLVETNTF 184

[Close]

BLAST of Cla97C11G217945.1 vs. ExPASy TrEMBL
Match: A0A6J1FJ33 (transcription factor bHLH146-like OS=Cucurbita moschata OX=3662 GN=LOC111444354 PE=4 SV=1)

HSP 1 Score: 213.8 bits (543), Expect = 6.5e-52
Identity = 138/195 (70.77%), Postives = 152/195 (77.95%), Query Frame = 0


Query: 1   MGRQIVRKGSRRVFSLEPNKVAYTMFARNYVKYLMTSLVKISHHQQQ---KNFQKLVKFE 60
           MGRQI+RK  +RV SLEPNK+AYTMFARNYVKYLMTSL KISHH QQ   +NFQKLVKFE
Sbjct: 1   MGRQILRK-RKRVLSLEPNKLAYTMFARNYVKYLMTSLPKISHHHQQHQEQNFQKLVKFE 60

Query: 61  VDMAMALSASEFAWGIALKKKLLQREVGNGNENGFDFSLQTVKFSQEEEEEEEEEEEEEE 120
           VDMAMA SA+EF+WG ALKKKLLQRE GNG+ NGF  SLQ VKFS+              
Sbjct: 61  VDMAMAQSATEFSWGNALKKKLLQREDGNGS-NGFGLSLQRVKFSR-------------- 120

Query: 121 EEEEEEEEEEEEEEEEEEEEKMENGLMKLRKIIPGGSDFNVGGLEEDDLLKQTESYVKCL 180
            E  E E+EE EE EE EE K+ENGLMKLRKI+PGGS+   G LEEDDL KQTESY+KCL
Sbjct: 121 -ENLEREDEEHEEREEHEERKIENGLMKLRKIVPGGSN---GELEEDDLFKQTESYIKCL 175

Query: 181 ELQVNVLRGLVETNT 193
           ELQVNVLR LV+TNT
Sbjct: 181 ELQVNVLRCLVDTNT 175

[Close]

BLAST of Cla97C11G217945.1 vs. ExPASy TrEMBL
Match: A0A6J1I0E6 (transcription factor bHLH146-like OS=Cucurbita maxima OX=3661 GN=LOC111468586 PE=4 SV=1)

HSP 1 Score: 204.9 bits (520), Expect = 3.0e-49
Identity = 138/195 (70.77%), Postives = 153/195 (78.46%), Query Frame = 0


Query: 1   MGRQIVRKGSRRVFSLEPNKVAYTMFARNYVKYLMTSLVKISHH---QQQKNFQKLVKFE 60
           MGRQI+RK  +RV SLEP+K+AYTMFARNYVKYLMTSL KISHH    QQ+NFQKLVKFE
Sbjct: 1   MGRQILRK-RKRVLSLEPDKLAYTMFARNYVKYLMTSLPKISHHHQQHQQQNFQKLVKFE 60

Query: 61  VDMAMALSASEFAWGIALKKKLLQREVGNGNENGFDFSLQTVKFSQEEEEEEEEEEEEEE 120
           VDMAMA SA+EF+WG ALKKKLLQRE  NG+ NGF FSL  VKFS+            E 
Sbjct: 61  VDMAMAQSATEFSWGNALKKKLLQREDDNGS-NGFGFSL-PVKFSR------------EN 120

Query: 121 EEEEEEEEEEEEEEEEEEEEKMENGLMKLRKIIPGGSDFNVGGLEEDDLLKQTESYVKCL 180
            E E+EE EE EE EE EE K+ENGLMKLRKI+PGGS+   G LEEDDL KQTESY+KCL
Sbjct: 121 LEREDEEHEEHEEHEEREERKIENGLMKLRKIVPGGSN---GELEEDDLFKQTESYIKCL 177

Query: 181 ELQVNVLRGLVETNT 193
           ELQVNVLR LV+TNT
Sbjct: 181 ELQVNVLRCLVDTNT 177

[Close]

BLAST of Cla97C11G217945.1 vs. ExPASy TrEMBL
Match: A0A6J1DIU0 (transcription factor bHLH146 OS=Momordica charantia OX=3673 GN=LOC111020869 PE=4 SV=1)

HSP 1 Score: 204.1 bits (518), Expect = 5.1e-49
Identity = 131/197 (66.50%), Postives = 147/197 (74.62%), Query Frame = 0


Query: 1   MGRQIVRKGSRRVFSLEPNKVAYTMFARNYVKYLMTSLVKISHHQQQKNFQKLVKFEVDM 60
           MGRQIVRK  RRVFSLEPNK+ Y MFARNY K LM SL KIS + Q  N QK+VKFEVDM
Sbjct: 1   MGRQIVRK-RRRVFSLEPNKLVYIMFARNYAKNLMASLSKISPNHQ--NLQKVVKFEVDM 60

Query: 61  AMALSASEFAWGIALKKKLLQR-EVGNGN-ENGFDFSLQTVKFSQEEEEEEEEEEEEEEE 120
           AMALSASEFAWG ALK+KLLQ+ E GNGN  N FDFSLQT+KFS+               
Sbjct: 61  AMALSASEFAWGHALKQKLLQKQENGNGNGRNSFDFSLQTLKFSR--------------- 120

Query: 121 EEEEEEEEEEEEEEEEEEEKMENGLMKLRKIIPGG---SDFNVGGLEEDDLLKQTESYVK 180
                   E+EEEEEE+++KMENGL+KLRKI+PGG   +D N   LEEDDLLKQTESY+K
Sbjct: 121 --------EKEEEEEEDKKKMENGLVKLRKILPGGENNNDSNGDLLEEDDLLKQTESYIK 171

Query: 181 CLELQVNVLRGLVETNT 193
           CLELQVNVLR LV+TNT
Sbjct: 181 CLELQVNVLRCLVDTNT 171

[Close]

BLAST of Cla97C11G217945.1 vs. TAIR 10
Match: AT4G30180.1 (sequence-specific DNA binding transcription factors;transcription regulators )

HSP 1 Score: 75.1 bits (183), Expect = 6.9e-14
Identity = 61/192 (31.77%), Postives = 98/192 (51.04%), Query Frame = 0


Query: 1   MGRQIVRKGSRRVFSLEPNKVAYTMFARNYVKYLMTSLVKISHHQQQKNFQKLVKFEVDM 60
           M RQI+ +  +RVFSLEPNK    +F R Y  +L+ +L K+  +  + + ++ VK EVDM
Sbjct: 1   MERQIINR-KKRVFSLEPNKNPSAVFTRKYTSHLVPALKKL--NMNKNSSKQTVKHEVDM 60

Query: 61  AMALSASEFAWGIALKKKLLQREVGNGNENGFDFSLQTVKFSQEEEEEEEEEEEEEEEEE 120
           A+ALSA EFAW   L +KL          +     ++ +                     
Sbjct: 61  ALALSAQEFAWSRFLLQKLSSSSNPTTTTSSSSDGIRIL--------------------- 120

Query: 121 EEEEEEEEEEEEEEEEEKMENGLMKLRKIIPGGSDFNVGGLEEDDLLKQTESYVKCLELQ 180
                E  ++E   EE  +E  L +L+K++PGG + NV     +++L +  +Y+KCLELQ
Sbjct: 121 -----ERPDKEGGNEEGGIEERLRELKKLLPGGEEMNV-----EEMLSEIGNYIKCLELQ 158

Query: 181 VNVLRGLVETNT 193
              L+ +V+ +T
Sbjct: 181 TIALKSIVQDST 158

[Close]

BLAST of Cla97C11G217945.1 vs. TAIR 10
Match: AT2G18969.1 (BEST Arabidopsis thaliana protein match is: sequence-specific DNA binding transcription factors;transcription regulators (TAIR:AT4G30180.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 63.9 bits (154), Expect = 1.6e-10
Identity = 71/197 (36.04%), Postives = 112/197 (56.85%), Query Frame = 0


Query: 1   MGRQIVRKGSRRVFSLEPNKVAYTMFARNYVKYLMTSLVKI-----SHHQQQKNFQKLVK 60
           M RQI+ K  +RVFSL+PNK    +FAR YV +L+ +L KI     S    +++ ++ VK
Sbjct: 1   MERQIINK-RKRVFSLQPNKNPKAVFARRYVSHLVPALKKINMNKSSSKTNKQSLEQTVK 60

Query: 61  FEVDMAMALSASEFAWGIALKKKLLQREVGNGNENGFDFSLQTVKFSQEEEEEEEEEEEE 120
            EVDMA ALSA EFAW   L++KLL         + +D  + T              E  
Sbjct: 61  HEVDMAFALSAQEFAWSRFLQQKLL--------SSPYDDPIST---------SSSPSEIL 120

Query: 121 EEEEEEEEEEEEEEEEEEEEEEKMENGLMKLRKIIPGGSDFNVGGLEEDDLLKQTESYVK 180
           E   + +  E+ ++ +EEEE  +++  L +L+K++PGG + N+     +++L +  SY+ 
Sbjct: 121 ERSSKRQGGEKHQDSDEEEEGGEIKKRLKELQKLLPGGEEMNM-----EEILSEIGSYIV 174

Query: 181 CLELQVNVLRGLVETNT 193
           CLELQ+ VL+ +V+ NT
Sbjct: 181 CLELQMIVLKSIVQDNT 174

The following BLAST results are available for this feature:

BLAST of Cla97C11G217945.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038877916.1	6.0e-60	75.00	transcription factor bHLH146-like [Benincasa hispida]	[more]
XP_016901419.1	8.6e-59	75.62	PREDICTED: uncharacterized protein At4g30180 [Cucumis melo]	[more]
XP_011648935.1	9.5e-58	74.24	transcription factor bHLH146 [Cucumis sativus] >KGN61154.1 hypothetical protein ...	[more]
XP_023538247.1	7.1e-53	70.77	transcription factor bHLH146-like [Cucurbita pepo subsp. pepo]	[more]
XP_022938205.1	1.3e-51	70.77	transcription factor bHLH146-like [Cucurbita moschata]	[more]

BLAST of Cla97C11G217945.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SUM5	9.7e-13	31.77	Transcription factor bHLH146 OS=Arabidopsis thaliana OX=3702 GN=BHLH146 PE=2 SV=...	[more]

BLAST of Cla97C11G217945.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S4DZN3	4.2e-59	75.62	uncharacterized protein At4g30180 OS=Cucumis melo OX=3656 GN=LOC103492789 PE=4 S...	[more]
A0A0A0LJA7	4.6e-58	74.24	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G060350 PE=4 SV=1	[more]
A0A6J1FJ33	6.5e-52	70.77	transcription factor bHLH146-like OS=Cucurbita moschata OX=3662 GN=LOC111444354 ...	[more]
A0A6J1I0E6	3.0e-49	70.77	transcription factor bHLH146-like OS=Cucurbita maxima OX=3661 GN=LOC111468586 PE...	[more]
A0A6J1DIU0	5.1e-49	66.50	transcription factor bHLH146 OS=Momordica charantia OX=3673 GN=LOC111020869 PE=4...	[more]

BLAST of Cla97C11G217945.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G30180.1	6.9e-14	31.77	sequence-specific DNA binding transcription factors;transcription regulators	[more]
AT2G18969.1	1.6e-10	36.04	BEST Arabidopsis thaliana protein match is: sequence-specific DNA binding transc...	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (97103) v2.5
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 96..149
None	No IPR available	GENE3D	3.30.70.2850		coord: 7..175 e-value: 1.8E-5 score: 26.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 103..138
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 101..140
None	No IPR available	PANTHER	PTHR33124:SF42	TRANSCRIPTION FACTOR BHLH146	coord: 10..192
IPR044660	Transcription factor IBH1-like	PANTHER	PTHR33124	TRANSCRIPTION FACTOR IBH1-LIKE 1	coord: 10..192

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cla97C11G217945	Cla97C11G217945	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cla97C11G217945.1-exon	Cla97C11G217945.1-exon-Cla97Chr11:23405617..23406487	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cla97C11G217945.1-five_prime_utr	Cla97C11G217945.1-five_prime_utr-Cla97Chr11:23405617..23405644	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cla97C11G217945.1-cds	Cla97C11G217945.1-cds-Cla97Chr11:23405645..23406226	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cla97C11G217945.1-three_prime_utr	Cla97C11G217945.1-three_prime_utr-Cla97Chr11:23406227..23406487	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cla97C11G217945.1	Cla97C11G217945.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0005488	binding