Cla97C02G045700.1 (mRNA) Watermelon (97103) v2.5

Overview


Name	Cla97C02G045700.1
Type	mRNA
Organism	Citrullus lanatus subsp. vulgaris cv. 97103 (Watermelon (97103) v2.5)
Description	Unknown protein
Location	Cla97Chr02: 33670034 .. 33675950 (-)
Sequence length	735
RNA-Seq Expression	Cla97C02G045700.1
Synteny	Cla97C02G045700.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCACCGCCGCCGCCACCGTCATTCTTTCTTGGCAAAGAGACCACCAAACACGCCGCCGTTCTTCTTCGGAGGAACTTGGACGGAATTCTTCCGGCCACCGCGGACGGTACCACTGCCGTTACCTGCGGCGGCGTTCTTGCCCTCGACCTTTTGAAGAACAGGGTCAGTTTCAAGAAGCTGATCCTTATTCAAGCTTCCGATGATCCAATCAAGAAGGCCCTTTTCCTTCTTGCTTTCGCCGGCACCCTTAGCCGCCGTGGCTGCGAACACACGTCCAGCGGCCGGAGAGAATGCGATTGGTAGAGAGGCCATAATATTTTTTAAAGTTTTTTGTTTTTGTTTTTGTTGGAATAGGAAAAATTGAAATGAAATGGGAAGAGGATATTTGGGTAAAATAAGAGGCGATGGAGTGTTGAGAAGCGCGAGCGAACCACAGGCGTCTTATCTCTTTGATTCTGAGTCCAAAATTTTTCCTTTTTTTTCTTTCTTTTCTTTTTGTACATTTTACGATTAATCCGCACCAGACTTGGCTCCTAATTCGACACGTCGGTTTGTCTTTAGCTTTCTAGAATGGGGTCCACGGGCCCAGACGGCTATTGGGCCGGCCCATTTAAATTAGAGCTCGAAGTATAGGTCTGTCGAACCAAAAGAATGTTGAGGTGTGAATGGCTCAGGGTTTTCAAATTGGAATTTTTGCATGCTAGTAGACAGTGGATGAAAAAGCTTCGCCCTTTTCAAATCTGGCATGTTGTTATTATCAAATTGAATTGTTTATTTTTTTTTCTTTATAAATTTGTTGAAGAAGAAATTTCTGCCAATCACAAGTCGCCACATCATCACAATTCAATTCCATTGTGGAATTTTGGGCTAAAGAAGGTACTGGGCCCAAGCCCAGGCCCACCTAGAGTCTATGAAAATCTTCTATAAATAGAGGTCCCTCCCATTCATTTAGGGGATGGAAGCATTGACGACAAAGTTGAAACTTTGAAGACTTGAAAATTAAAGCTCAATATTACAACCGTCTTCTGAAGATTGAAGACTTGGAAGACTTGGATGATCGATCCCAAGTTTACAATTTCTTGAAGATGGGAATAACCGAAGCTCTGAAGATTTGAAAAATACAACTCCTTCAAAATGTTGAAGATCATCAAAGATTAAAGCTCCAAAGATTAGCTTTTACTCTCCTAAACCTCTAAATATTAAAGCTCATAAGACTCACTAAAGCTCTTGAAATCAAAAAATCTAAATGTTCATTCAAGCATATCAACAAGCCTAACGCCAATCCAAGAAGATCATCAAGCCCAAAATCAATCCTTAAAACAAGAAATCTAAATAACATAGTTGTGCTCATTTATATCAACTAAACAAATATATATATATAGAAATTTCTCCGTGGTTCGTGGTGCCCAAGAACCCTCCCCATCTTCATCTCCCTCTTCACGAACCCTTTGTTGCCATCGACCAGGCGTGGTCTGTCGTCGCTCGATCGATCAAAGAAACCTATGGTCAAGGAACCTTTAGCCGTTGACGATCAAGTCTGTGCACTACAATCAACGGAACCCTAGCCATCTTCCATCACAGCACACCCATGTCCGAGGGTTGGGTCGGTAGCGGTGAGTTTGGTCATTTACAGGGATTGAAGAAAGGAGGTTTGGAGGGAGGAGAATTTGAGTCGACTGGGTGGGGCAGTGATCTAGGTCGTCAGGGGTTGTGTCAAGGGGCAGGAAGCCAGCCGACGACAGGGTGTGGGCAAGAGAGAAGAAAGGAAAAGAAGGAAAATCTTAGGGGTGGGAGAGCACAAAATGAGAAAACCTATAGTCAACTGCAGGTTTTTTTGTTTTTAATCATTTTGATTAATGGAGAATATTTGAAAATTAATAAATTTTTCTTAAAAAACGTGCGTGATCTTTGAATTTCCTAATTAAAAAATATCTTATAACTAAATGTTAGTTGGGGTCTAAATGGTAAATAACCCTAATTTTATTGTAAAATTAGACATTCTTGTAAATAAAGAAAAACTTCTGACACCACGCGTAGAAATCCCTTAATTTAAACCGATTATTTGCATTCTTCTAAATCCAGAAAAGAAAACGACCCGGAAGTTATTGGACTGTGTATGATTAACAACACAATCGAGCCCATTTTTGGGCCCATATTTATTTCCTAAGGGCCCATCGAATTATTGAGGCCCAAATTAATAAATTAATAAAGAAATGGTCATATATAGGCAAATAGGTGGAGAGGGTAATGGTGGCGCGTGCAGAACACGCGCCGACAACCTCTGCATGGCACAATAATTAACGGACGTGTTTTTTTGTCTCTCCACGTGCATCCCTGAATTCCAACTCTAATTTTGTTATTGTTCCAACTTCCAATTAACTTTTCTTTTTTTCTTTTTTAAATTATTTTGTATGTGTGTGTGTTTTGTTTAAAACCAATTTTTTTTTTTTTTCAACGGAAATATCATTAAGTTTTTGTATTCAAAAGTATGATTGGTTTATTTGTATCAGGACAGAGTACAAATTATTGTACCTCAAAACAATTAAAAACAGCACGAAATACTATTTTAAGAAAAAAAGAAAAATATATATATATATATATATATATATCTATTTAATCGTACTTATGGAATTTTTAAAGTATTTTTTTAAAGGTTAGATGATGTTTTAAATTGATTTAAAGTACGAGAACGGACATCACGCAAAATTAATTTAAGCATAATGATTATGATTTACTTGTTCTTTCTCTTATTATTAGTACTCATTATATCATAACTCCAAAGGGAACCATTAAATTTTCTTTAGAAACAAGCAACGGGTTTGCCGCGTCATCGGTTAAAAAAAAAAGTAATTTAAAAATAATTTAAGTCGCGATAAGTATTTGATTTTTTGTTTTGGAATTTTTTATACTAGATTGAAACTAGAAGTAAATAAACTACATATAACAAAATAACCAACTAATGAAAGATATACAATAACTAATTTTAATAGCTACTTTATTAAATAAACATGGGTTTACATCTCAAAATCAATTAACAAAGAGAAGAATAATTTATGTATCTTATAAATGGTGTGAGGTATCTCCGTTCTCTCAATGTGCGATTTTCGACATACTCCTTAAGATTATACATCTTTGTGTTCACTATTATTGGTTTGGATTTTTTTGGACTGAATGTTCATTTGAGCTTTATGGACTTTTAATACCATAATAGATAAACATAGGGTTCCACGTCAAAATCAATTAGTAATAGAGAAGAGTAATCCAAGCACCTTATACAAACTTGTAATGTCTCTTCGTATTCTCAAATCTCGATATGAGATTCTCAAAACATAGAGTGTCTTCAAAATGCAAGCCAAAATTTTAATACTTTTTTTATAAAAAAATGTTTTTTAGAATTTTACCAAAGATTCAAATGTTTTATTTGGGATGATGAAGACACGATTTAAAAATCACGAGAAACCAAGCACAATTTCAAATATTAAAAACTAAATATTTATCAAATGGAGTGCCAAAATTACAAGTTTAGTCTTGTTATGAAACTCCAGAGCATTATATCTAACTTTCAAGAATCATGTTGAACAACAAAAGTCAAAAAATTGAACACCAACAATTCTAAAACCAATTTGATCTCGAACCTTAAGATAGCTAGGCTTTGTGGCAAGTTATGATATTGGGTAGGCATAGGTGGATCAAGCAATTTTTTAAATACTGAGCTATTCATTCCAAGCAAGATAATATAATTATGAAAATAATAAACAAATAAAAAAGAAACAAAACAAGAAAACAATAAAAGTAACAAATAAACTTGAAAATTAGATTACCTCTTAGATCGAATATCTAGTAGCAAGATTTGGAACCTTGTTCTAGATTAAGTCACTCTACAATCAAACTTAATCAAGACTTGAATGGTTCAAATACATTCTATCCTAAGGATTGCAATGAAAACTTAGAAAATGCAAAGATAGTTACGTTGCTTATCAAAATTATATTTCATGAAAAAAAAAAAAAAAAAGTCGTCTTTTTACAATCCAATTCTGAACCTTTCTATAGCCATTACATGAAGTAACTCCCAACCTTTCAAATTACCAAAAATAAATGACAACTCAATGGGGATGATCCATTTCACTTGGAGGATTGTTTCTATTTAGTCTCTTAACTTTTAAAAGTGTGTAACAAATTCTGACACGTTCAATTTTTTGTCGAATAAATCTTTTTATTTTTAAATTTGCGCGCCTAGATATTTGAAGATTTTAAAAAATCAATTAACATATTATATATAAATTTGTATTTCATGTTTAATAATATATATCCTAAAGTTTTAAATTTGTTTCAGATCAAAGGGTTTTAAAAAAATTCCAAGTTCAAAAACTAAAATTATGATTTAAAAATTTCACTTGCCAAATAAGCACAGAACTAAAGTTAACAAACTAAATAACAAAAACATTTAATTTCATTATGTTGGCTACACTGCATCTAAAGTTCAGCTACATTATCTGAATTTATTGTCTTTATTATTATTGTAAAGTGAATAGCTAGGGGTTAGTTGCATATACAGCTCCTTTAATATTAGAAACAAATTTAATAGTTATATGTGTTTGTGGCATGAATACAATTAATTTTGAAAATAGAAATTTCAAATACCACTTACTCTATTTATAGGTAAGAACAAAATATACATATTATAGGGAGCTTAAAGTTTGTATCTTTATAATAAGAAAATTGAACTATTCAATATGTATATATGTACATAAAAAAAAAAAAAAAAAAACAATAAAAACAAAACAAGAAGTTGTGAAGCTCGTTTATTTTTTATTGGAGTAAGCGTAAGAGCAACTATCGATTCTTCTATCAGTATCTTTTTTTCTCTTGGAAGCTCCCGAATGTCTCATTTTGTCTTTGACTTTTTAAGATCAGTCTCACATTTTCCTTAGAGCACAATCACTCCTGAATTTACTAAAGCAATCTTTTCCTAAGCAGAAAAAACATACACATAAGCATTCGAGGATGTCGAATCATCCACTAAAGAGTAAGATTTTTGGAAGAATAAATTCATTGTCGAACCCTTAAAGCAACAAGCGCGAATAGACCAACGTGAGTATAGCTCAACTGACATGAACTTGTATTATCAACTTTGAAATTTAAGATTCAATCTCCACTGTAAATATTGTTAAAAAAAATGCAAACAAAATGTTAAATATATCTCATAATTCTAATTATTGGTATATATTAAAGATAATACGTCATCAATATAAGTATTTAAAAATGTAAACATAATCATAGCTCAACTGACATTCAAAGTATGTTATCAAACTCGAGGTCAGAGTTTGGATCCGCTTCCTCTATTATTATAAAAAATAATAAAAATAAAAAGTCCTTAACTAATTTGTTGGTATTATTTTAAAATTTGACATTGCATTTTAAATTGAAATTAAAGATTAATGAAGTAGATGGAAGGAGAGTGAAGGGAGGAGAGAGAGGATAACTTTTTAATTAATGTTATAAAACTTAATTCCTAAAAATTTGAATATCGAACATTTGTATTTTAAAATTTTGGACGAATTCAGATACTTTAAATTTAAAAAGTAAATTTACCAAAAAAACAAAAAAACAAAAAAACAAAACAAAAACAAACAAAGAAAAAACCTTTTTTTTTTTTTTCTTTTTTTCGTTTTTTTAGATAAACGTATGAAGTGATTAGATTTATTAAATGATAATAAATAAAAAAGCAACATTTCAAACTTTTTAGTTGATGACTGTGACAGTTGAGCAATCAAAGATCACAGACTCCACGTGGTTAAACCTAATTGGTATAATTGCGGTTAGACTGCCTCCTCAGGTAAGACTAGGGGATCCCCCGCCCATATATTTAAGCACGTTGACTGTTCAGTCACGTTTAGTGGGTCAACCAAAATAA

mRNA sequence

ATGGCACCGCCGCCGCCACCGTCATTCTTTCTTGGCAAAGAGACCACCAAACACGCCGCCGTTCTTCTTCGGAGGAACTTGGACGGAATTCTTCCGGCCACCGCGGACGGTACCACTGCCGTTACCTGCGGCGGCGTTCTTGCCCTCGACCTTTTGAAGAACAGGGTCAGTTTCAAGAAGCTGATCCTTATTCAAGCTTCCGATGATCCAATCAAGAAGGCCCTTTTCCTTCTTGCTTTCGCCGGCACCCTTAGCCGCCGTGGCTGCGAACACACGTCCAGCGGCCGGAGAGAATGCGATTGGCGTGGTCTGTCGTCGCTCGATCGATCAAAGAAACCTATGGTCAAGGAACCTTTAGCCGTTGACGATCAAGGATTGAAGAAAGGAGGTTTGGAGGGAGGAGAATTTGAGTCGACTGGGTGGGGCAGTGATCTAGGTCGTCAGGGGTTGTGTCAAGGGGCAGGAAGCCAGCCGACGACAGGGTGTGGGCAAGAGAGAAGAAAGGAAAAGAAGGAAAATCTTAGGGGTGGGAGAGCACAAAATGAGAAAACCTATAGTCAACTGCAGTTGATGACTGTGACAGTTGAGCAATCAAAGATCACAGACTCCACGTGGTTAAACCTAATTGGTATAATTGCGGTTAGACTGCCTCCTCAGGTAAGACTAGGGGATCCCCCGCCCATATATTTAAGCACGTTGACTGTTCAGTCACGTTTAGTGGGTCAACCAAAATAA

Coding sequence (CDS)

ATGGCACCGCCGCCGCCACCGTCATTCTTTCTTGGCAAAGAGACCACCAAACACGCCGCCGTTCTTCTTCGGAGGAACTTGGACGGAATTCTTCCGGCCACCGCGGACGGTACCACTGCCGTTACCTGCGGCGGCGTTCTTGCCCTCGACCTTTTGAAGAACAGGGTCAGTTTCAAGAAGCTGATCCTTATTCAAGCTTCCGATGATCCAATCAAGAAGGCCCTTTTCCTTCTTGCTTTCGCCGGCACCCTTAGCCGCCGTGGCTGCGAACACACGTCCAGCGGCCGGAGAGAATGCGATTGGCGTGGTCTGTCGTCGCTCGATCGATCAAAGAAACCTATGGTCAAGGAACCTTTAGCCGTTGACGATCAAGGATTGAAGAAAGGAGGTTTGGAGGGAGGAGAATTTGAGTCGACTGGGTGGGGCAGTGATCTAGGTCGTCAGGGGTTGTGTCAAGGGGCAGGAAGCCAGCCGACGACAGGGTGTGGGCAAGAGAGAAGAAAGGAAAAGAAGGAAAATCTTAGGGGTGGGAGAGCACAAAATGAGAAAACCTATAGTCAACTGCAGTTGATGACTGTGACAGTTGAGCAATCAAAGATCACAGACTCCACGTGGTTAAACCTAATTGGTATAATTGCGGTTAGACTGCCTCCTCAGGTAAGACTAGGGGATCCCCCGCCCATATATTTAAGCACGTTGACTGTTCAGTCACGTTTAGTGGGTCAACCAAAATAA

Protein sequence

MAPPPPPSFFLGKETTKHAAVLLRRNLDGILPATADGTTAVTCGGVLALDLLKNRVSFKKLILIQASDDPIKKALFLLAFAGTLSRRGCEHTSSGRRECDWRGLSSLDRSKKPMVKEPLAVDDQGLKKGGLEGGEFESTGWGSDLGRQGLCQGAGSQPTTGCGQERRKEKKENLRGGRAQNEKTYSQLQLMTVTVEQSKITDSTWLNLIGIIAVRLPPQVRLGDPPPIYLSTLTVQSRLVGQPK

Homology

[Close]

BLAST of Cla97C02G045700.1 vs. NCBI nr
Match: KAG6570665.1 (hypothetical protein SDJN03_29580, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 129.8 bits (325), Expect = 3.2e-26
Identity = 75/102 (73.53%), Postives = 79/102 (77.45%), Query Frame = 0


Query: 3   PPPPP----SFFLGKETTKHAAVLLRRNLDGILPATADGTTAVTCGGVLALDLLKNRVSF 62
           PPPPP    S  LGKETT+  AVL RR+LDGILPA  DG  AVT   VLALDLLKNRV F
Sbjct: 6   PPPPPSSSSSVSLGKETTE-PAVLFRRDLDGILPAATDG-AAVT---VLALDLLKNRVGF 65

Query: 63  KKLILIQASDDPIKKALFLLAFAGTLSRRGCEHTSSGRRECD 101
           +KLI +QASDDPIKKALFLLAFAG L RRGCEH S  RRECD
Sbjct: 66  EKLIPLQASDDPIKKALFLLAFAGALRRRGCEHASGSRRECD 102

The following BLAST results are available for this feature:

BLAST of Cla97C02G045700.1 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6570665.1	3.2e-26	73.53	hypothetical protein SDJN03_29580, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of Cla97C02G045700.1 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Cla97C02G045700.1 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Cla97C02G045700.1 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Watermelon (97103) v2.5
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 147..180
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 163..178

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cla97C02G045700	Cla97C02G045700	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cla97C02G045700.1-exon	Cla97C02G045700.1-exon-Cla97Chr02:33670034..33670201	exon
Cla97C02G045700.1-exon	Cla97C02G045700.1-exon-Cla97Chr02:33674120..33674314	exon
Cla97C02G045700.1-exon	Cla97C02G045700.1-exon-Cla97Chr02:33674413..33674482	exon
Cla97C02G045700.1-exon	Cla97C02G045700.1-exon-Cla97Chr02:33675649..33675950	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cla97C02G045700.1-cds	Cla97C02G045700.1-cds-Cla97Chr02:33670034..33670201	CDS
Cla97C02G045700.1-cds	Cla97C02G045700.1-cds-Cla97Chr02:33674120..33674314	CDS
Cla97C02G045700.1-cds	Cla97C02G045700.1-cds-Cla97Chr02:33674413..33674482	CDS
Cla97C02G045700.1-cds	Cla97C02G045700.1-cds-Cla97Chr02:33675649..33675950	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cla97C02G045700.1	Cla97C02G045700.1-protein	polypeptide