ClCG11G010980.1 (mRNA) Watermelon (Charleston Gray) v2.5
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TGTCAAGTGTGGGAGAGTTGGGTCGGAGCACGCTATTTTGTACAAGACAGCAACCTCTGTGGCTCTCTGTTTCTACTACCAAAATCTTCAGCAGTTCGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAATCCAAACAAAAATGTCGTCTGTTGGCACATTTCAACTAGTACTACCTTCATTTCCTTCCTCCTCCTCTTCTTCTTTTACCAATACAACCCTTTCTCTTCGTCCTCTCCCCTTCCCCACTTCGCCTCTACAGCGCCACCCCCACCTTAATCGGAATTTGCAACATTTCGATGCAATTTCCCTTCAACACAGATCGAAATCTGGACGGAATTTCGGATCCTTCCCCTGCTTCTCGGGTAATTTCTTCTTTTTGCCCTTTTTCTTCATTTTGTGCTCTGATTGTTTCTTCTCTCTAGGTATCGTAGCTTTTGGGGCCTATTTATTTACATTGATTGCTGTTATCTGATGGAGGTTTGGGACGAAAATGTAGAGTTGACTTTTCGAAATTATGTTTATTGTTCTGAATTGGGTTAGTTTGGAACCGGTTTTTATCGAGAGAGTTGATTGAATTGATTACTTTTTATGGGGAGGAAATTTCCGGAGATTATGGGGAAGAGTTAATTTGGTTTACGGATTTCTTCTCGTACCAAAAGGCTTGGGTCACTGGCATTTGATTGGTGCGTTAAGGATTTCTACTGCCATTGAAGCAGGAGTGGTTTTCTTTACTAAGAGGTTTTGGTGTCCTTCAACACTTGCTATTTTGTTTCTCTTCGAAGAAAACCTTCTTTTCTGAGGGCTATACTTGCCTTTACTTAAGTTGTGCCGAATCTGCTGATCATGGTCAAAGACTCAGGAGAGTGGATTGGAAAGGAAGGGAAATAGAGTGGAACCACTTTGCTAGGTTCAATTTTGCAAAGTATAAAACTGAAAAGTAGCCATGTGGTTTAGTTTTGATCTGTTTCTTTTTGCGAATGGGTTTGATACTTATTTTTGGGAGGATTGGTGGGTAGGCGAGAAGCTGCTTTGTTTGGTATTCCCTTAGCTTTATAATTTGTCTGAAATGAGGTTGCATTCGGTGGCCTCTACTTATCTTCTCAAGATTTGAATCTCTCTCTCTCTCTCTCTCTCTCTTTGGGATTTTTTCGTCCTCTTACCAACCGTGAGACTTTGGAGGTTGTGGGCATTCTCTCCATTCTGTCACATAAGAGGGTTTTGGGGAGAAGGGATGTTAGGGTCTGGAACCCTCTTCCTTCTAGGGATTCTCTTGTCGTACATATTTCTATTTGCTTATCCTGGGAGCCTCCGTTTTTTCTTCTATTTGGTAGGTTAAATTTCTAAGAAAGTTAAAGTTCTTCGTCTGGAAAATCTTGCATGGGAGAGTGAACTCCCAAGATCGTGTCCAATGAGAACGACATTCTACTTTTTTATTGCAACCGCAATGGTGTGTTCTCTGTATATCTCATGAAGAGGACCTGGACCAGCTCTTATGGAGTTGTCGTTCACTCACCCTTCCTTTCGTGACAAGAGCAGAGTGTTATGGTAGGCATTTTGTTTTGCAATTTTGTGGGGGGTGTGGCTTGAGAGGAACAGTAGGATCTTTAGGGGGTTGAGAGATTTTGGAGGAGGTGCGGAGGTGGTGAGATTTAATGCCTCTTCGCAAGTTTCCACAAATAAGATTTTTTGTAATTATCAATTTGGTCTTATTCTTTTGTATCGGAATCCTTTCTTGTAAGTGGTGACGGATTCCTTTTTGGATTTTTTTTTGTATCCCCTTCTACATCCTTTTGTTTTCCTTGCATTTTTCTTTATGATAGCTTGGTTTCTGATAAAAAAACTGTTAATTGTCTTAAGACTTTGGACTTCCATTATGCATCAAATATATTCCCCAACTCTTTAATTTTATAGCTTGATGTGTGAATTGTCCATGTTAAAATGTCATGGTGTTTGTAGATTTGACCCTCAATTGCCCCTTCCGAATCAAGTTTCTCACATAAGAACACTCATTGGACTTCTATCATTCTCTTGCAAGAGATTTCGGAAATATTCCTCTTCATACACACACACACTCATAGTTGCTTTCTGATGTAGCCACAACTCTGCTGCATTTTATTTATTTCTTGATTTTGGTATAGACTTTGAAACACTTTCGAAGTAAACTCTTTTTCTTTGGGGTTAATGGCCTGCGTTTGCCTGTATCTGTTGTAACTACTGGTTTAACTAGTAACAGTCACTTTGTTAGCCTATTACATATGGTTTGGCTTAACAATTTTTTACTCTAGAATTTAGTAATAACTGGCCGATCAATGGACATCTATTCCAAAAGGTTTTAAAGATGAATATCAGTTTATTATTTACTTGTTGTTATTGTTTTTTTAGAGAAGAAATATTTCATTGAAAAAGTGAAATAAAGGGCAAACCCCCAAGCACTTAAAAGTGATTACAGACAAGATTTCCAGTTGGAAACTAAGTAAGAAAGATTAAAGTGCTTAAAAGATGCTTATTTTTGCACTCATACAACGCAGTAGAGAGAACCGAATCCATAAAATGAGCAAAATCAGAATTATTGTTTTAATTGGAAATTGGAGCCCACTTCTTGCATATACCCACCTCCCTGCCCCCAAACTAAATTACCGTACAGGTTTCACCTACAGCTCGGGAGACAACATGGAAAATTAATTACTTTTGTACCCCACTTTTTGTAGTAGTTGAAAGCTCCTTCTTTTAGTTTCGGTTATTGCATTGGCTCCTTCTGATGTTGGATTTTTGTTTTTACGTTTTTTTTTTTTTTTTTTTTGGTTTTGCCCTTGCTNAGCCCACTTCTTGCATATACCCACCTCCCTGCCCCCAAACTAAATTACCGTACAGGTTTCACCTACAGCTCGGGAGACAACATGGAAAATTAATTACTTTTGTACCCCACTTTTTGTAGTAGTTGAAAGCTCCTTCTTTTAGTTTCGGTTATTGCATTGGCTCCTTCTGATGTTGGATTTTTGTTTTTACGTTTTTTTTTTTTTTTTTTTTGGTTATGCCCTTGCTATATCCTTTTATTTGCTCTAGTATGGTTTTTCCATCTAAAAAAGATCATGCATTGGCATTATACTACTGAAAAAGTTCAGGCCAAGTCTTGGTTCGTAGAAATTTCATGAAGATAGCTGATCTATTTCATGAATGCTTGAATGCTATTTCATCTTTAAAAACATTAAAAAGCTGAGCTTGTGTGGTCTTTCTGCTCTTTTTATGGCAGCATTGTCTCCCGAGCTAAAAACAACAATCGACAAAGTTGTTACCTCGGAGAAAGTAGTTCTGTTTATGAAGGGATCAAAAGACTTCCCACAATGTGGATTCTCCCACACTGTAGTACAAATATTGAAGTCTTTAAATGTGCACTTCGAGACAATAAACATTCTAGAGAACGAACTATTAAGACAAGGACTGAAGGAGTATTCAAGCTGGCCAACCTTTCCTCAGCTGTATATTGATGGAGAGTTCTTTGGTGGTTGTGACATAACAGTTGGTAAGTTTCTCGAATCTTTTTCTCATGATTGATGATACCCATGAGGCCATCTTTCCTTTTAATAGGGAACATAAAAAGGGTAGATAACTGGCTGACAATGTTGAAGTTTTAGAGATTGTCCTGTATATCAAATAAATTTTTGTCCTTCATGAACCTATTAGACACAAAATTGAAAGTTTGAGAACCTATGGAAGTTTAGTTATAAAAAAGACACAAATCTCAAAGTTCATAGACTAAATTTGTAACTTGACAAAAAAACAAAAGCAAGTTTTTAAAAGCTACTTTTTTTTAGTTTTCAAATTTTGGCTTAGTTTTTTAAACCATTGGTAAAATGTAGATTACAAAAGAATAAATTTGAAGGTGCAAATAGTGTCTGTAGGCTTAATTTTCAAAAATAAAATGGGGCCTAAAAATTTAAAGACCAAAATAGAATTAATATAAGAAGGAAAAATATGATTCAATTTTTTTTTTTTTTTTTAATTTTGTTAACATCCAAGGAATGTTGACTTTGTCATTTTTTAATTACAAGTAGGAGTATTCAGATTTGAACCTCAATTTGAGAAAATGAGTACATAATAATTACCATATACATATTTTGGCATGCTCTTTAATCTATCTAGTTGTCTGTTCCATCATATCAATTTAGCTTAAATTAATTTAATGTGCTTGTCATAAGACTCATAAAGTGATAACACATCTAAGGCAGGATAGAATAATGACTAATTGGAAAACCTAAAAATTGAGACTTAATTTATTACTAAACCATAAAAGATTCTTAAAGAAAAGATTGAGAACAAGGGGTTCTATCTTTTTTTTTTTTCTTTTTTTTTTTTAATGAAAAAAATTCTTTTTAAGTTTAAAAGTCTCTTTTGAGTAATGTGATTGCTTAAAGATATTAGACATGTAAGTAGTTGATTTAACTCAAGTTATTTAATTTTTTAAACTAATTACATCCACCATATTAAAAAATATATATATAATAATAATAATTATTATTATATTAACGTCTCAAGGGAATACAATATTTAGATTTTTAGTAAAAGTTTTCCATTTTTTTTTTGTTACAGAAGCATACAAAAGTGGGGAACTGCAAGAAGTGTTGGAGAAGGCCATGTGTTCGTGAGTTAAGGTTTGGCAATGATTCTTCACTTGATTTTTAGTGATGGAAAGATGTATATCAATATGACATTTACTCAAGGCTTCATTGCAAAAGGGTAAAAAACAATTACTTGTTTGTTTTAATGTTTACTTCTCAAATAGTTAAAGAAAAATTGTCTGGTGTGATTAGTTAAAATGCGCATAAATTGATTCGAACAATTAAAAGGGAAAAGGGAATGGAATAGGTCCTACAATGTTTTTTTTGT TGTCAAGTGTGGGAGAGTTGGGTCGGAGCACGCTATTTTGTACAAGACAGCAACCTCTGTGGCTCTCTGTTTCTACTACCAAAATCTTCAGCAGTTCGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAATCCAAACAAAAATGTCGTCTGTTGGCACATTTCAACTAGTACTACCTTCATTTCCTTCCTCCTCCTCTTCTTCTTTTACCAATACAACCCTTTCTCTTCGTCCTCTCCCCTTCCCCACTTCGCCTCTACAGCGCCACCCCCACCTTAATCGGAATTTGCAACATTTCGATGCAATTTCCCTTCAACACAGATCGAAATCTGGACGGAATTTCGGATCCTTCCCCTGCTTCTCGGCATTGTCTCCCGAGCTAAAAACAACAATCGACAAAGTTGTTACCTCGGAGAAAGTAGTTCTGTTTATGAAGGGATCAAAAGACTTCCCACAATGTGGATTCTCCCACACTGTAGTACAAATATTGAAGTCTTTAAATGTGCACTTCGAGACAATAAACATTCTAGAGAACGAACTATTAAGACAAGGACTGAAGGAGTATTCAAGCTGGCCAACCTTTCCTCAGCTGTATATTGATGGAGAGTTCTTTGGTGGTTGTGACATAACAGTTGAAGCATACAAAAGTGGGGAACTGCAAGAAGTGTTGGAGAAGGCCATGTGTTCGTGAGTTAAGGTTTGGCAATGATTCTTCACTTGATTTTTAGTGATGGAAAGATGTATATCAATATGACATTTACTCAAGGCTTCATTGCAAAAGGGTAAAAAACAATTACTTGTTTGTTTTAATGTTTACTTCTCAAATAGTTAAAGAAAAATTGTCTGGTGTGATTAGTTAAAATGCGCATAAATTGATTCGAACAATTAAAAGGGAAAAGGGAATGGAATAGGTCCTACAATGTTTTTTTTGT TGTCAAGTGTGGGAGAGTTGGGTCGGAGCACGCTATTTTGTACAAGACAGCAACCTCTGTGGCTCTCTGTTTCTACTACCAAAATCTTCAGCAGTTCGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAATCCAAACAAAAATGTCGTCTGTTGGCACATTTCAACTAGTACTACCTTCATTTCCTTCCTCCTCCTCTTCTTCTTTTACCAATACAACCCTTTCTCTTCGTCCTCTCCCCTTCCCCACTTCGCCTCTACAGCGCCACCCCCACCTTAATCGGAATTTGCAACATTTCGATGCAATTTCCCTTCAACACAGATCGAAATCTGGACGGAATTTCGGATCCTTCCCCTGCTTCTCGGCATTGTCTCCCGAGCTAAAAACAACAATCGACAAAGTTGTTACCTCGGAGAAAGTAGTTCTGTTTATGAAGGGATCAAAAGACTTCCCACAATGTGGATTCTCCCACACTGTAGTACAAATATTGAAGTCTTTAAATGTGCACTTCGAGACAATAAACATTCTAGAGAACGAACTATTAAGACAAGGACTGAAGGAGTATTCAAGCTGGCCAACCTTTCCTCAGCTGTATATTGATGGAGAGTTCTTTGGTGGTTGTGACATAACAGTTGAAGCATACAAAAGTGGGGAACTGCAAGAAGTGTTGGAGAAGGCCATGTGTTCGTGA CQVWESWVGARYFVQDSNLCGSLFLLPKSSAVRRRRRRRRRRRRIQTKMSSVGTFQLVLPSFPSSSSSSFTNTTLSLRPLPFPTSPLQRHPHLNRNLQHFDAISLQHRSKSGRNFGSFPCFSALSPELKTTIDKVVTSEKVVLFMKGSKDFPQCGFSHTVVQILKSLNVHFETINILENELLRQGLKEYSSWPTFPQLYIDGEFFGGCDITVEAYKSGELQEVLEKAMCS Homology
BLAST of ClCG11G010980.1 vs. NCBI nr
Match: XP_038889485.1 (monothiol glutaredoxin-S7, chloroplastic [Benincasa hispida]) HSP 1 Score: 350.9 bits (899), Expect = 8.3e-93 Identity = 174/182 (95.60%), Postives = 177/182 (97.25%), Query Frame = 0
BLAST of ClCG11G010980.1 vs. NCBI nr
Match: KAG6598930.1 (putative inactive serine/threonine-protein kinase scy1, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 321.6 bits (823), Expect = 5.4e-84 Identity = 164/189 (86.77%), Postives = 169/189 (89.42%), Query Frame = 0
BLAST of ClCG11G010980.1 vs. NCBI nr
Match: XP_008441869.1 (PREDICTED: uncharacterized monothiol glutaredoxin ycf64-like [Cucumis melo] >XP_008441870.1 PREDICTED: uncharacterized monothiol glutaredoxin ycf64-like [Cucumis melo]) HSP 1 Score: 317.8 bits (813), Expect = 7.8e-83 Identity = 162/183 (88.52%), Postives = 166/183 (90.71%), Query Frame = 0
BLAST of ClCG11G010980.1 vs. NCBI nr
Match: XP_004152834.1 (monothiol glutaredoxin-S7, chloroplastic [Cucumis sativus] >KGN61246.1 hypothetical protein Csa_006467 [Cucumis sativus]) HSP 1 Score: 317.0 bits (811), Expect = 1.3e-82 Identity = 162/183 (88.52%), Postives = 166/183 (90.71%), Query Frame = 0
BLAST of ClCG11G010980.1 vs. NCBI nr
Match: XP_022997370.1 (uncharacterized protein LOC111492306 [Cucurbita maxima]) HSP 1 Score: 312.8 bits (800), Expect = 2.5e-81 Identity = 159/182 (87.36%), Postives = 163/182 (89.56%), Query Frame = 0
BLAST of ClCG11G010980.1 vs. ExPASy Swiss-Prot
Match: Q84Y95 (Monothiol glutaredoxin-S14, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=GRXS14 PE=1 SV=2) HSP 1 Score: 189.5 bits (480), Expect = 4.2e-47 Identity = 103/165 (62.42%), Postives = 123/165 (74.55%), Query Frame = 0
BLAST of ClCG11G010980.1 vs. ExPASy Swiss-Prot
Match: Q851Y7 (Monothiol glutaredoxin-S7, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=GRXS7 PE=2 SV=1) HSP 1 Score: 189.5 bits (480), Expect = 4.2e-47 Identity = 88/107 (82.24%), Postives = 99/107 (92.52%), Query Frame = 0
BLAST of ClCG11G010980.1 vs. ExPASy Swiss-Prot
Match: P73056 (Uncharacterized monothiol glutaredoxin ycf64-like OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=slr1846 PE=3 SV=1) HSP 1 Score: 140.2 bits (352), Expect = 2.9e-32 Identity = 61/107 (57.01%), Postives = 86/107 (80.37%), Query Frame = 0
BLAST of ClCG11G010980.1 vs. ExPASy Swiss-Prot
Match: P51384 (Uncharacterized monothiol glutaredoxin ycf64 OS=Porphyra purpurea OX=2787 GN=ycf64 PE=3 SV=1) HSP 1 Score: 122.9 bits (307), Expect = 4.8e-27 Identity = 55/104 (52.88%), Postives = 76/104 (73.08%), Query Frame = 0
BLAST of ClCG11G010980.1 vs. ExPASy Swiss-Prot
Match: Q1XDA3 (Uncharacterized monothiol glutaredoxin ycf64 OS=Pyropia yezoensis OX=2788 GN=ycf64 PE=3 SV=1) HSP 1 Score: 122.9 bits (307), Expect = 4.8e-27 Identity = 54/107 (50.47%), Postives = 77/107 (71.96%), Query Frame = 0
BLAST of ClCG11G010980.1 vs. ExPASy TrEMBL
Match: A0A1S3B565 (uncharacterized monothiol glutaredoxin ycf64-like OS=Cucumis melo OX=3656 GN=LOC103485896 PE=3 SV=1) HSP 1 Score: 317.8 bits (813), Expect = 3.8e-83 Identity = 162/183 (88.52%), Postives = 166/183 (90.71%), Query Frame = 0
BLAST of ClCG11G010980.1 vs. ExPASy TrEMBL
Match: A0A0A0LMN8 (Glutaredoxin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G074080 PE=3 SV=1) HSP 1 Score: 317.0 bits (811), Expect = 6.5e-83 Identity = 162/183 (88.52%), Postives = 166/183 (90.71%), Query Frame = 0
BLAST of ClCG11G010980.1 vs. ExPASy TrEMBL
Match: A0A6J1K9E2 (uncharacterized protein LOC111492306 OS=Cucurbita maxima OX=3661 GN=LOC111492306 PE=3 SV=1) HSP 1 Score: 312.8 bits (800), Expect = 1.2e-81 Identity = 159/182 (87.36%), Postives = 163/182 (89.56%), Query Frame = 0
BLAST of ClCG11G010980.1 vs. ExPASy TrEMBL
Match: A0A6J1EPE9 (monothiol glutaredoxin-S7, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111436177 PE=3 SV=1) HSP 1 Score: 308.9 bits (790), Expect = 1.8e-80 Identity = 158/182 (86.81%), Postives = 161/182 (88.46%), Query Frame = 0
BLAST of ClCG11G010980.1 vs. ExPASy TrEMBL
Match: A0A6J1D7S5 (monothiol glutaredoxin-S7, chloroplastic isoform X2 OS=Momordica charantia OX=3673 GN=LOC111018159 PE=3 SV=1) HSP 1 Score: 297.4 bits (760), Expect = 5.3e-77 Identity = 154/182 (84.62%), Postives = 160/182 (87.91%), Query Frame = 0
BLAST of ClCG11G010980.1 vs. TAIR 10
Match: AT3G54900.1 (CAX interacting protein 1 ) HSP 1 Score: 189.5 bits (480), Expect = 3.0e-48 Identity = 103/165 (62.42%), Postives = 123/165 (74.55%), Query Frame = 0
BLAST of ClCG11G010980.1 vs. TAIR 10
Match: AT2G38270.1 (CAX-interacting protein 2 ) HSP 1 Score: 113.2 bits (282), Expect = 2.7e-25 Identity = 52/104 (50.00%), Postives = 73/104 (70.19%), Query Frame = 0
BLAST of ClCG11G010980.1 vs. TAIR 10
Match: AT4G04950.1 (thioredoxin family protein ) HSP 1 Score: 107.1 bits (266), Expect = 2.0e-23 Identity = 60/175 (34.29%), Postives = 97/175 (55.43%), Query Frame = 0
BLAST of ClCG11G010980.1 vs. TAIR 10
Match: AT3G15660.1 (glutaredoxin 4 ) HSP 1 Score: 99.4 bits (246), Expect = 4.1e-21 Identity = 43/98 (43.88%), Postives = 65/98 (66.33%), Query Frame = 0
BLAST of ClCG11G010980.1 vs. TAIR 10
Match: AT3G15660.2 (glutaredoxin 4 ) HSP 1 Score: 99.4 bits (246), Expect = 4.1e-21 Identity = 43/98 (43.88%), Postives = 65/98 (66.33%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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