ClCG10G008630.1 (mRNA) Watermelon (Charleston Gray) v2.5
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATACAGAAGAAAATGATCAATATAGATGGAGTTCAAACGAAAAAACATGTTTGGACTAAAGAAAAGGATGGCAAGTTGATCGAGTGTCTAATGGAGTTAGCAAATCTAAGCCAATGGCATTGCGATAATGGAACATTTAGATTAGGCTATCTACAAAAAGTAAGCAAATGATGAAGTCAAAGTTGTCTGGATGTGAGGTGAAGGCTCAACCTCACATAGAATCAAGAGTGAAACTTTTGAAGAAGCAATATAATGCAATTGTAGAAATGTTGGGACGAAATTGTGGTGGTTTTGGTTGGAATGAAATAGAGATGTGTATTGATTGTTGCAAAGATGTTTTTGATGATTGGGTTAAGGTATGAAAATTATAATTTTTATTACATTCAATAATATACTTTTTGTAATTAATATAATATTACATAATTTTGTCAGAGAGTCACCCAATGCAAAAGGGTTACGTAACAAGTTGTTCTCATACTTAGATGAAATGGCAATAATATTTGGCAAAGACCGAGCTAATGGCCTTGGAGCTGAAGCATCAAAAGATATGGTTAAGAAAGTAGATATGGAGACAAACAATGGGACTTATTCAATGGTCACTGCTAACCGCTTTTGGTGTGGGATGACTTCACTGTGTCGCACCCACCTAAAGAGGTAA ATACAGAAGAAAATGATCAATATAGATGGAGTTCAAACGAAAAAACATGTTTGGACTAAAGAAAAGGATGGCAAGTTGATCGAGTGTCTAATGGAAGAGTCACCCAATGCAAAAGGGTTACGTAACAAGTTGTTCTCATACTTAGATGAAATGGCAATAATATTTGGCAAAGACCGAGCTAATGGCCTTGGAGCTGAAGCATCAAAAGATATGGTTAAGAAAGTAGATATGGAGACAAACAATGGGACTTATTCAATGGTCACTGCTAACCGCTTTTGGTGTGGGATGACTTCACTGTGTCGCACCCACCTAAAGAGGTAA ATACAGAAGAAAATGATCAATATAGATGGAGTTCAAACGAAAAAACATGTTTGGACTAAAGAAAAGGATGGCAAGTTGATCGAGTGTCTAATGGAAGAGTCACCCAATGCAAAAGGGTTACGTAACAAGTTGTTCTCATACTTAGATGAAATGGCAATAATATTTGGCAAAGACCGAGCTAATGGCCTTGGAGCTGAAGCATCAAAAGATATGGTTAAGAAAGTAGATATGGAGACAAACAATGGGACTTATTCAATGGTCACTGCTAACCGCTTTTGGTGTGGGATGACTTCACTGTGTCGCACCCACCTAAAGAGGTAA IQKKMINIDGVQTKKHVWTKEKDGKLIECLMEESPNAKGLRNKLFSYLDEMAIIFGKDRANGLGAEASKDMVKKVDMETNNGTYSMVTANRFWCGMTSLCRTHLKR Homology
BLAST of ClCG10G008630.1 vs. NCBI nr
Match: XP_038886815.1 (uncharacterized protein LOC120077046 [Benincasa hispida]) HSP 1 Score: 80.5 bits (197), Expect = 9.7e-12 Identity = 37/54 (68.52%), Postives = 44/54 (81.48%), Query Frame = 0
BLAST of ClCG10G008630.1 vs. NCBI nr
Match: CAN65842.1 (hypothetical protein VITISV_027369 [Vitis vinifera]) HSP 1 Score: 67.0 bits (162), Expect = 1.1e-07 Identity = 35/82 (42.68%), Postives = 54/82 (65.85%), Query Frame = 0
BLAST of ClCG10G008630.1 vs. NCBI nr
Match: XP_038895748.1 (uncharacterized protein LOC120083912 [Benincasa hispida]) HSP 1 Score: 65.9 bits (159), Expect = 2.5e-07 Identity = 34/70 (48.57%), Postives = 42/70 (60.00%), Query Frame = 0
BLAST of ClCG10G008630.1 vs. NCBI nr
Match: KAA0060172.1 (retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 65.5 bits (158), Expect = 3.2e-07 Identity = 33/71 (46.48%), Postives = 42/71 (59.15%), Query Frame = 0
BLAST of ClCG10G008630.1 vs. NCBI nr
Match: TYJ99310.1 (retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 64.3 bits (155), Expect = 7.2e-07 Identity = 32/64 (50.00%), Postives = 40/64 (62.50%), Query Frame = 0
BLAST of ClCG10G008630.1 vs. ExPASy TrEMBL
Match: A5BND9 (DDE Tnp4 domain-containing protein OS=Vitis vinifera OX=29760 GN=VITISV_027369 PE=3 SV=1) HSP 1 Score: 67.0 bits (162), Expect = 5.4e-08 Identity = 35/82 (42.68%), Postives = 54/82 (65.85%), Query Frame = 0
BLAST of ClCG10G008630.1 vs. ExPASy TrEMBL
Match: A0A5A7UWG2 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold542G00470 PE=4 SV=1) HSP 1 Score: 65.5 bits (158), Expect = 1.6e-07 Identity = 33/71 (46.48%), Postives = 42/71 (59.15%), Query Frame = 0
BLAST of ClCG10G008630.1 vs. ExPASy TrEMBL
Match: A0A5D3BHP6 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G005230 PE=4 SV=1) HSP 1 Score: 64.3 bits (155), Expect = 3.5e-07 Identity = 32/64 (50.00%), Postives = 40/64 (62.50%), Query Frame = 0
BLAST of ClCG10G008630.1 vs. ExPASy TrEMBL
Match: A0A2N9GF48 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS29069 PE=4 SV=1) HSP 1 Score: 61.2 bits (147), Expect = 2.9e-06 Identity = 31/76 (40.79%), Postives = 42/76 (55.26%), Query Frame = 0
BLAST of ClCG10G008630.1 vs. ExPASy TrEMBL
Match: A0A162AHN3 (Myb_DNA-bind_3 domain-containing protein OS=Daucus carota subsp. sativus OX=79200 GN=DCAR_009785 PE=4 SV=1) HSP 1 Score: 60.1 bits (144), Expect = 6.6e-06 Identity = 27/59 (45.76%), Postives = 39/59 (66.10%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
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