ClCG08G008440.2 (mRNA) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG08G008440.2
Type	mRNA
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	Mitochondrial acidic protein
Location	CG_Chr08: 20932005 .. 20933851 (-)
Sequence length	856
RNA-Seq Expression	ClCG08G008440.2
Synteny	ClCG08G008440.2

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ACACAAACCACCACAACAAAATCGGAGGAAAATGTTGAAGAAAGTGATGGCCGCCACTGCGGTGGCTCTTCAGAGTAGCCGCCGGCCGTCTCTCATGGTCACTTGCCGCCATTCGACCTCCGCGTCCTCTGCCGTCAACTCGTTGCTCCTCCGCTCCCTCAAAGAACACTATCTCGAGATCTCCAGAATGACGCCTCCTCCGGTATGATTTCCATTGTTCTGTTCTCTGTTCTCTGTTTTCAATCACCAAACCCTAAAATTAGGGTTTTAAGCTATTCAAATGTCGTTTGTTCGTCTTACTTGGCTACTTGTTTTTATTGCAGAAAGTGAGCCCTCCTTCTTCCTTTTCTATCATTAAAGGCGCACTAGACGGCAAAGGACCGGTGCTTACTAGAACCTACGGTAAAGAAGAGGTTAACATTTCGGTTATGCGATTGGCTAATATTATTCCGGGAGGTGGTGGAGACGACGATGAAATTAACCAGTTGTTTCTTTATGTGACGGTATCGAAGCCGGAGCAGAGGGATAATTTGCAATTTCTTTGTGGGTTGTATCCTGATGCATTAGGTATTCATTCCGTTTCGATGAGACCGAAGGCCGAACCCTCGGGGTTTTTCGTTATTCCGTCCGGCTATACTGGCCCCGTATTCGAGTAAGTTTAATGTCTTCTAATTGTTTAGCCTCAATTATATTGGAGTTTGTTGTCTCAGATTGTATGTTTTTGGTGGTAGTTCATCAATTAGAGAAATGCTTGTAATTTAGATCCCGTCTTAATTTTTAGTGTTATCGACTAAACTAACAAGAACTGAATCATTTTATCGTGGTAAAGTAATTGAAGGAGTAAGGTATGAATTAAGATCTAATTGAAGGTCATGAGTTCAAGTTTTGTTGCTGCATACGATTTGCTCCCAAATAACCTGTAACTTGAACTGAACAAGATAAACACAACCAATTTGGTAATGAATCTATCCTGATTTCTGGGTTGTTGGTTTGTTTCGTTGGTTATAAGTAATCAGCTAATTTTTCTTAAGTAATTATTGTTTATTGCCTAAGGCGCTTATCATTTTTAGTCTGCACTCTTTGAATCTTCATTTGCAGCTCCCTGTTTAGTTCCTTCATTTGCAGGCTACAGCCACTGATTTCTTTTCTTTGGTTACAAACTCAGACTTTGTTTTTCGCTCCCACCACTGATTTAATTTCTTCTCTTTCAGTTGATCAACTCCCTCATATCATGTTATTCACTCACTTGAGATGCTTGCATCCTATCCCCTAGCATCATACTTCATAGCATAGTGCAAATTTGCAGATTTTAATGAGTTAGTACTCTTTGGTTTGGTTGTAATTCTGCGGCTCTCTTGGTTGACTTGGCTTGTGTTCTTGTATGACCCAGTTATATAATCCTTTTGTTTTCCTTTTATGAAAGCCATCTCTTATTTAAAGGTTTTTCTTGGAGATGCCTGTTCATCATAATTGGCCTAGAAATGGTATCTAAGGATCATGATGGTAGTTTTTCTTTTCACAGCATATTTGCCAGTTTCTATGAACCCAAGTGGGATTATGATGTTTTCTGCCTTGGATGTTCATTTGCTGATAATCTTTGCCCAATTACCGTTGATGGAAAAACATGCCATAAGAAAACTTACACTTATTTTTCTTTGGATGACAGAGATCTAGATGAGAAAATGCGAGATGTATTTCACAATTATTTAGAAGAGCGAGGTATAAGTGAGTCTCTTTTCCCATTTCTTCAAGCATGGCTTTATGTGAAAGAACATCGAAATCTTATGCGGTGGTTCAGAACGGTTGGCTCATTCATCAATGAGAACAAGAACGCTAAAGAGGATTGA

mRNA sequence

ACACAAACCACCACAACAAAATCGGAGGAAAATGTTGAAGAAAGTGATGGCCGCCACTGCGGTGGCTCTTCAGAGTAGCCGCCGGCCGTCTCTCATGGTCACTTGCCGCCATTCGACCTCCGCGTCCTCTGCCGTCAACTCGTTGCTCCTCCGCTCCCTCAAAGAACACTATCTCGAGATCTCCAGAATGACGCCTCCTCCGAAAGTGAGCCCTCCTTCTTCCTTTTCTATCATTAAAGGCGCACTAGACGGCAAAGGACCGGTGCTTACTAGAACCTACGGTAAAGAAGAGGTTAACATTTCGGTTATGCGATTGGCTAATATTATTCCGGGAGGTGGTGGAGACGACGATGAAATTAACCAGTTGTTTCTTTATGTGACGGTATCGAAGCCGGAGCAGAGGGATAATTTGCAATTTCTTTGTGGGTTGTATCCTGATGCATTAGGTATTCATTCCGTTTCGATGAGACCGAAGGCCGAACCCTCGGGGTTTTTCGTTATTCCGTCCGGCTATACTGGCCCCGTATTCGACATATTTGCCAGTTTCTATGAACCCAAGTGGGATTATGATGTTTTCTGCCTTGGATGTTCATTTGCTGATAATCTTTGCCCAATTACCGTTGATGGAAAAACATGCCATAAGAAAACTTACACTTATTTTTCTTTGGATGACAGAGATCTAGATGAGAAAATGCGAGATGTATTTCACAATTATTTAGAAGAGCGAGGTATAAGTGAGTCTCTTTTCCCATTTCTTCAAGCATGGCTTTATGTGAAAGAACATCGAAATCTTATGCGGTGGTTCAGAACGGTTGGCTCATTCATCAATGAGAACAAGAACGCTAAAGAGGATTGA

Coding sequence (CDS)

ATGTTGAAGAAAGTGATGGCCGCCACTGCGGTGGCTCTTCAGAGTAGCCGCCGGCCGTCTCTCATGGTCACTTGCCGCCATTCGACCTCCGCGTCCTCTGCCGTCAACTCGTTGCTCCTCCGCTCCCTCAAAGAACACTATCTCGAGATCTCCAGAATGACGCCTCCTCCGAAAGTGAGCCCTCCTTCTTCCTTTTCTATCATTAAAGGCGCACTAGACGGCAAAGGACCGGTGCTTACTAGAACCTACGGTAAAGAAGAGGTTAACATTTCGGTTATGCGATTGGCTAATATTATTCCGGGAGGTGGTGGAGACGACGATGAAATTAACCAGTTGTTTCTTTATGTGACGGTATCGAAGCCGGAGCAGAGGGATAATTTGCAATTTCTTTGTGGGTTGTATCCTGATGCATTAGGTATTCATTCCGTTTCGATGAGACCGAAGGCCGAACCCTCGGGGTTTTTCGTTATTCCGTCCGGCTATACTGGCCCCGTATTCGACATATTTGCCAGTTTCTATGAACCCAAGTGGGATTATGATGTTTTCTGCCTTGGATGTTCATTTGCTGATAATCTTTGCCCAATTACCGTTGATGGAAAAACATGCCATAAGAAAACTTACACTTATTTTTCTTTGGATGACAGAGATCTAGATGAGAAAATGCGAGATGTATTTCACAATTATTTAGAAGAGCGAGGTATAAGTGAGTCTCTTTTCCCATTTCTTCAAGCATGGCTTTATGTGAAAGAACATCGAAATCTTATGCGGTGGTTCAGAACGGTTGGCTCATTCATCAATGAGAACAAGAACGCTAAAGAGGATTGA

Protein sequence

MLKKVMAATAVALQSSRRPSLMVTCRHSTSASSAVNSLLLRSLKEHYLEISRMTPPPKVSPPSSFSIIKGALDGKGPVLTRTYGKEEVNISVMRLANIIPGGGGDDDEINQLFLYVTVSKPEQRDNLQFLCGLYPDALGIHSVSMRPKAEPSGFFVIPSGYTGPVFDIFASFYEPKWDYDVFCLGCSFADNLCPITVDGKTCHKKTYTYFSLDDRDLDEKMRDVFHNYLEERGISESLFPFLQAWLYVKEHRNLMRWFRTVGSFINENKNAKED

Homology

[Close]

BLAST of ClCG08G008440.2 vs. NCBI nr
Match: XP_022938797.1 (uncharacterized protein At2g39795, mitochondrial [Cucurbita moschata] >KAG6578831.1 putative protein, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia] >KAG7016357.1 putative protein, mitochondrial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 380.6 bits (976), Expect = 1.2e-101
Identity = 197/276 (71.38%), Postives = 212/276 (76.81%), Query Frame = 0


Query: 1   MLKKVMAATAVALQSSRRPSLMVTCRHSTSASSAVNSLLLRSLKEHYLEISRMTPPPKVS 60
           MLKKV A  AVAL+ S RPSLM TCRHSTS S+AVNSLLLRSLKEHYLEISRMTPPPKVS
Sbjct: 1   MLKKVTAVAAVALRGSHRPSLMATCRHSTSVSTAVNSLLLRSLKEHYLEISRMTPPPKVS 60

Query: 61  PPSSFSIIKGALDGKGPVLTRTYGKEEVNISVMRLANIIPGGGGD--DDEINQLFLYVTV 120
           PPSSFSIIKGALDG GPVLTR+YG EE+N+SVMRLANI+PGGGGD  DDEINQLFL++TV
Sbjct: 61  PPSSFSIIKGALDGNGPVLTRSYGNEEINVSVMRLANIVPGGGGDDGDDEINQLFLHLTV 120

Query: 121 SKPEQRDNLQFLCGLYPDALGIHSVSMRPKAEPSGFFVIPSGYTGPVFDIFASFYEPKWD 180
           SKPEQR++L FLCGLYPDALGIHSVSMRPKAE SGF V+PSGY GPVF+           
Sbjct: 121 SKPEQRESLHFLCGLYPDALGIHSVSMRPKAESSGFLVVPSGYNGPVFE----------- 180

Query: 181 YDVFCLGCSFADNLCPITVDGKTCHKKTYTYFSLDDRDLDEKMRDVFHNYLEERGISESL 240
                                                DLDEKMRDVFHNY+EERGI+ESL
Sbjct: 181 -------------------------------------DLDEKMRDVFHNYIEERGINESL 228

Query: 241 FPFLQAWLYVKEHRNLMRWFRTVGSFINENKNAKED 275
           FPFLQAWLYVKEHRNLMRWFR+VGSFINE KNAKED
Sbjct: 241 FPFLQAWLYVKEHRNLMRWFRSVGSFINERKNAKED 228

[Close]

BLAST of ClCG08G008440.2 vs. NCBI nr
Match: XP_038884404.1 (uncharacterized protein At2g39795, mitochondrial [Benincasa hispida])

HSP 1 Score: 380.2 bits (975), Expect = 1.5e-101
Identity = 201/276 (72.83%), Postives = 215/276 (77.90%), Query Frame = 0


Query: 1   MLKKVMAATAVALQSSRRPSLMVTCRHSTSASSAVNSLLLRSLKEHYLEISRMTPPPKVS 60
           MLKK MAATAVAL+ SRRPSLMVTCRHSTS +SAVNSLLLRSLKEHYLEISRMTPPPKVS
Sbjct: 1   MLKKAMAATAVALR-SRRPSLMVTCRHSTSVTSAVNSLLLRSLKEHYLEISRMTPPPKVS 60

Query: 61  PPSSFSIIKGALDGKGPVLTRTYGKEEVNISVMRLANIIPGGGGD--DDEINQLFLYVTV 120
           PPSSFSII+GALDG GPVLTR YGKEEV ISVMRLANI+PGGGGD  DDEINQLFL+VTV
Sbjct: 61  PPSSFSIIQGALDGNGPVLTRNYGKEEVKISVMRLANIVPGGGGDDGDDEINQLFLHVTV 120

Query: 121 SKPEQRDNLQFLCGLYPDALGIHSVSMRPKAEPSGFFVIPSGYTGPVFDIFASFYEPKWD 180
           SK EQ+D+L FLCGLYPDALGIHSVSMRPKAE SGF V+PSGY GPVF+           
Sbjct: 121 SKLEQKDDLHFLCGLYPDALGIHSVSMRPKAESSGFLVVPSGYNGPVFE----------- 180

Query: 181 YDVFCLGCSFADNLCPITVDGKTCHKKTYTYFSLDDRDLDEKMRDVFHNYLEERGISESL 240
                                                DLDEKMRD+FHNY+EERGI+ESL
Sbjct: 181 -------------------------------------DLDEKMRDIFHNYIEERGINESL 227

Query: 241 FPFLQAWLYVKEHRNLMRWFRTVGSFINENKNAKED 275
           FPFLQAWLYVKEHRNLMRWFR+VGSFINE+KNAKED
Sbjct: 241 FPFLQAWLYVKEHRNLMRWFRSVGSFINEHKNAKED 227

[Close]

BLAST of ClCG08G008440.2 vs. NCBI nr
Match: XP_023549717.1 (uncharacterized protein At2g39795, mitochondrial [Cucurbita pepo subsp. pepo])

HSP 1 Score: 373.6 bits (958), Expect = 1.4e-99
Identity = 195/276 (70.65%), Postives = 210/276 (76.09%), Query Frame = 0


Query: 1   MLKKVMAATAVALQSSRRPSLMVTCRHSTSASSAVNSLLLRSLKEHYLEISRMTPPPKVS 60
           MLKKV A  AVAL+ SRRPSLM TCR STS S+AVNSLLLRSLKEHYLEISRMTPPPKVS
Sbjct: 1   MLKKVTAVAAVALRGSRRPSLMATCRRSTSVSTAVNSLLLRSLKEHYLEISRMTPPPKVS 60

Query: 61  PPSSFSIIKGALDGKGPVLTRTYGKEEVNISVMRLANIIPGGGGD--DDEINQLFLYVTV 120
           PPSSFSIIKGALDG GPVLTR+YG EE+N+SVMRLANI+PGGGGD  DDEINQLFL++TV
Sbjct: 61  PPSSFSIIKGALDGNGPVLTRSYGNEEINVSVMRLANIVPGGGGDDGDDEINQLFLHLTV 120

Query: 121 SKPEQRDNLQFLCGLYPDALGIHSVSMRPKAEPSGFFVIPSGYTGPVFDIFASFYEPKWD 180
           SKPEQR++L FLCGLYPDALGIHSVSMRPKAE SGF V+PSGY GPVF+           
Sbjct: 121 SKPEQRESLHFLCGLYPDALGIHSVSMRPKAESSGFLVVPSGYNGPVFE----------- 180

Query: 181 YDVFCLGCSFADNLCPITVDGKTCHKKTYTYFSLDDRDLDEKMRDVFHNYLEERGISESL 240
                                                DLDEKMRDV HNY+EERGI+ESL
Sbjct: 181 -------------------------------------DLDEKMRDVLHNYIEERGINESL 228

Query: 241 FPFLQAWLYVKEHRNLMRWFRTVGSFINENKNAKED 275
           FPFLQAWLYVKEHRNLMRWFR+VGSFINE KNAK D
Sbjct: 241 FPFLQAWLYVKEHRNLMRWFRSVGSFINEPKNAKVD 228

[Close]

BLAST of ClCG08G008440.2 vs. NCBI nr
Match: XP_022992760.1 (uncharacterized protein At2g39795, mitochondrial [Cucurbita maxima])

HSP 1 Score: 373.2 bits (957), Expect = 1.9e-99
Identity = 194/276 (70.29%), Postives = 210/276 (76.09%), Query Frame = 0


Query: 1   MLKKVMAATAVALQSSRRPSLMVTCRHSTSASSAVNSLLLRSLKEHYLEISRMTPPPKVS 60
           MLKKV A  AVAL+ S RPSLM TCRHST+ S+AVNSLLLRSLKEHYLEISRMTPPPKVS
Sbjct: 1   MLKKVTAVAAVALRGSHRPSLMATCRHSTTVSTAVNSLLLRSLKEHYLEISRMTPPPKVS 60

Query: 61  PPSSFSIIKGALDGKGPVLTRTYGKEEVNISVMRLANIIPGGGGD--DDEINQLFLYVTV 120
           PPSSFSIIKGALDG GPVLTR+YG EE+N+SVMRLANI+PGGGGD  DDEINQLFL+VTV
Sbjct: 61  PPSSFSIIKGALDGNGPVLTRSYGNEEINVSVMRLANIVPGGGGDDGDDEINQLFLHVTV 120

Query: 121 SKPEQRDNLQFLCGLYPDALGIHSVSMRPKAEPSGFFVIPSGYTGPVFDIFASFYEPKWD 180
           SKPEQR++L FLCGLYPDALGIHSVSMRPKAE SGF V+PSGY GPVF+           
Sbjct: 121 SKPEQRESLHFLCGLYPDALGIHSVSMRPKAESSGFLVVPSGYNGPVFE----------- 180

Query: 181 YDVFCLGCSFADNLCPITVDGKTCHKKTYTYFSLDDRDLDEKMRDVFHNYLEERGISESL 240
                                                DLDEKMRDV HNY+EERGI++SL
Sbjct: 181 -------------------------------------DLDEKMRDVLHNYIEERGINQSL 228

Query: 241 FPFLQAWLYVKEHRNLMRWFRTVGSFINENKNAKED 275
           F FLQAWLYVKEHRNLMRWFR+VGSFINE KNAKED
Sbjct: 241 FSFLQAWLYVKEHRNLMRWFRSVGSFINEPKNAKED 228

[Close]

BLAST of ClCG08G008440.2 vs. NCBI nr
Match: XP_022134253.1 (uncharacterized protein At2g39795, mitochondrial [Momordica charantia])

HSP 1 Score: 365.2 bits (936), Expect = 5.1e-97
Identity = 192/278 (69.06%), Postives = 208/278 (74.82%), Query Frame = 0


Query: 1   MLKKVMAATAVALQSSRRPSLMVTC-RHSTSASSAVNSLLLRSLKEHYLEISRMTPPPKV 60
           M+KK++A  A ALQS RRPSLM TC RHSTS SSAVNSLLLRSLKEHYLEISRMTPPPKV
Sbjct: 1   MMKKLIAVAAEALQSRRRPSLMTTCRRHSTSVSSAVNSLLLRSLKEHYLEISRMTPPPKV 60

Query: 61  SPPSSFSIIKGALDGKGPVLTRTYGKEEVNISVMRLANIIPGGGGDDD---EINQLFLYV 120
           SPPS FSIIKGALD  GPVLTR +G+EEVNISVMRLANI+PGGGGDDD   EINQLFL+V
Sbjct: 61  SPPSPFSIIKGALDSNGPVLTRNFGEEEVNISVMRLANIVPGGGGDDDGDEEINQLFLHV 120

Query: 121 TVSKPEQRDNLQFLCGLYPDALGIHSVSMRPKAEPSGFFVIPSGYTGPVFDIFASFYEPK 180
           TVSKPEQRDNL FLCGLYPDALGIHSVSMRP+AE SGF V+PSGY GPVF+         
Sbjct: 121 TVSKPEQRDNLHFLCGLYPDALGIHSVSMRPRAESSGFLVVPSGYNGPVFE--------- 180

Query: 181 WDYDVFCLGCSFADNLCPITVDGKTCHKKTYTYFSLDDRDLDEKMRDVFHNYLEERGISE 240
                                                  DLDEKMRDV HNY++ERG++E
Sbjct: 181 ---------------------------------------DLDEKMRDVLHNYIDERGVNE 230

Query: 241 SLFPFLQAWLYVKEHRNLMRWFRTVGSFINENKNAKED 275
           SLFPFLQAWLYVKEHRNLMRWFR+ GSFINE K AKE+
Sbjct: 241 SLFPFLQAWLYVKEHRNLMRWFRSAGSFINERKGAKEN 230

[Close]

BLAST of ClCG08G008440.2 vs. ExPASy Swiss-Prot
Match: O94675 (Mitochondrial acidic protein mam33 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPBC776.07 PE=3 SV=1)

HSP 1 Score: 48.9 bits (115), Expect = 1.1e-04
Identity = 22/62 (35.48%), Postives = 37/62 (59.68%), Query Frame = 0


Query: 204 KKTYTYFSLDDRDLDEKMRDVFHNYLEERGISESLFPFLQAWLYVKEHRNLMRWFRTVGS 263
           K+   Y     ++LD +++D+FH+YLEER I ESL  F+ ++   KE +  + W  +V  
Sbjct: 207 KRRKQYLGPSFKELDPELQDLFHSYLEERKIDESLSSFIVSFGLTKELKEYINWLESVRQ 266

Query: 264 FI 266
           F+
Sbjct: 267 FL 268

[Close]

BLAST of ClCG08G008440.2 vs. ExPASy TrEMBL
Match: A0A6J1FF36 (uncharacterized protein At2g39795, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111444904 PE=4 SV=1)

HSP 1 Score: 380.6 bits (976), Expect = 5.7e-102
Identity = 197/276 (71.38%), Postives = 212/276 (76.81%), Query Frame = 0


Query: 1   MLKKVMAATAVALQSSRRPSLMVTCRHSTSASSAVNSLLLRSLKEHYLEISRMTPPPKVS 60
           MLKKV A  AVAL+ S RPSLM TCRHSTS S+AVNSLLLRSLKEHYLEISRMTPPPKVS
Sbjct: 1   MLKKVTAVAAVALRGSHRPSLMATCRHSTSVSTAVNSLLLRSLKEHYLEISRMTPPPKVS 60

Query: 61  PPSSFSIIKGALDGKGPVLTRTYGKEEVNISVMRLANIIPGGGGD--DDEINQLFLYVTV 120
           PPSSFSIIKGALDG GPVLTR+YG EE+N+SVMRLANI+PGGGGD  DDEINQLFL++TV
Sbjct: 61  PPSSFSIIKGALDGNGPVLTRSYGNEEINVSVMRLANIVPGGGGDDGDDEINQLFLHLTV 120

Query: 121 SKPEQRDNLQFLCGLYPDALGIHSVSMRPKAEPSGFFVIPSGYTGPVFDIFASFYEPKWD 180
           SKPEQR++L FLCGLYPDALGIHSVSMRPKAE SGF V+PSGY GPVF+           
Sbjct: 121 SKPEQRESLHFLCGLYPDALGIHSVSMRPKAESSGFLVVPSGYNGPVFE----------- 180

Query: 181 YDVFCLGCSFADNLCPITVDGKTCHKKTYTYFSLDDRDLDEKMRDVFHNYLEERGISESL 240
                                                DLDEKMRDVFHNY+EERGI+ESL
Sbjct: 181 -------------------------------------DLDEKMRDVFHNYIEERGINESL 228

Query: 241 FPFLQAWLYVKEHRNLMRWFRTVGSFINENKNAKED 275
           FPFLQAWLYVKEHRNLMRWFR+VGSFINE KNAKED
Sbjct: 241 FPFLQAWLYVKEHRNLMRWFRSVGSFINERKNAKED 228

[Close]

BLAST of ClCG08G008440.2 vs. ExPASy TrEMBL
Match: A0A6J1JWM0 (uncharacterized protein At2g39795, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111489000 PE=4 SV=1)

HSP 1 Score: 373.2 bits (957), Expect = 9.1e-100
Identity = 194/276 (70.29%), Postives = 210/276 (76.09%), Query Frame = 0


Query: 1   MLKKVMAATAVALQSSRRPSLMVTCRHSTSASSAVNSLLLRSLKEHYLEISRMTPPPKVS 60
           MLKKV A  AVAL+ S RPSLM TCRHST+ S+AVNSLLLRSLKEHYLEISRMTPPPKVS
Sbjct: 1   MLKKVTAVAAVALRGSHRPSLMATCRHSTTVSTAVNSLLLRSLKEHYLEISRMTPPPKVS 60

Query: 61  PPSSFSIIKGALDGKGPVLTRTYGKEEVNISVMRLANIIPGGGGD--DDEINQLFLYVTV 120
           PPSSFSIIKGALDG GPVLTR+YG EE+N+SVMRLANI+PGGGGD  DDEINQLFL+VTV
Sbjct: 61  PPSSFSIIKGALDGNGPVLTRSYGNEEINVSVMRLANIVPGGGGDDGDDEINQLFLHVTV 120

Query: 121 SKPEQRDNLQFLCGLYPDALGIHSVSMRPKAEPSGFFVIPSGYTGPVFDIFASFYEPKWD 180
           SKPEQR++L FLCGLYPDALGIHSVSMRPKAE SGF V+PSGY GPVF+           
Sbjct: 121 SKPEQRESLHFLCGLYPDALGIHSVSMRPKAESSGFLVVPSGYNGPVFE----------- 180

Query: 181 YDVFCLGCSFADNLCPITVDGKTCHKKTYTYFSLDDRDLDEKMRDVFHNYLEERGISESL 240
                                                DLDEKMRDV HNY+EERGI++SL
Sbjct: 181 -------------------------------------DLDEKMRDVLHNYIEERGINQSL 228

Query: 241 FPFLQAWLYVKEHRNLMRWFRTVGSFINENKNAKED 275
           F FLQAWLYVKEHRNLMRWFR+VGSFINE KNAKED
Sbjct: 241 FSFLQAWLYVKEHRNLMRWFRSVGSFINEPKNAKED 228

[Close]

BLAST of ClCG08G008440.2 vs. ExPASy TrEMBL
Match: A0A6J1C1F6 (uncharacterized protein At2g39795, mitochondrial OS=Momordica charantia OX=3673 GN=LOC111006555 PE=4 SV=1)

HSP 1 Score: 365.2 bits (936), Expect = 2.5e-97
Identity = 192/278 (69.06%), Postives = 208/278 (74.82%), Query Frame = 0


Query: 1   MLKKVMAATAVALQSSRRPSLMVTC-RHSTSASSAVNSLLLRSLKEHYLEISRMTPPPKV 60
           M+KK++A  A ALQS RRPSLM TC RHSTS SSAVNSLLLRSLKEHYLEISRMTPPPKV
Sbjct: 1   MMKKLIAVAAEALQSRRRPSLMTTCRRHSTSVSSAVNSLLLRSLKEHYLEISRMTPPPKV 60

Query: 61  SPPSSFSIIKGALDGKGPVLTRTYGKEEVNISVMRLANIIPGGGGDDD---EINQLFLYV 120
           SPPS FSIIKGALD  GPVLTR +G+EEVNISVMRLANI+PGGGGDDD   EINQLFL+V
Sbjct: 61  SPPSPFSIIKGALDSNGPVLTRNFGEEEVNISVMRLANIVPGGGGDDDGDEEINQLFLHV 120

Query: 121 TVSKPEQRDNLQFLCGLYPDALGIHSVSMRPKAEPSGFFVIPSGYTGPVFDIFASFYEPK 180
           TVSKPEQRDNL FLCGLYPDALGIHSVSMRP+AE SGF V+PSGY GPVF+         
Sbjct: 121 TVSKPEQRDNLHFLCGLYPDALGIHSVSMRPRAESSGFLVVPSGYNGPVFE--------- 180

Query: 181 WDYDVFCLGCSFADNLCPITVDGKTCHKKTYTYFSLDDRDLDEKMRDVFHNYLEERGISE 240
                                                  DLDEKMRDV HNY++ERG++E
Sbjct: 181 ---------------------------------------DLDEKMRDVLHNYIDERGVNE 230

Query: 241 SLFPFLQAWLYVKEHRNLMRWFRTVGSFINENKNAKED 275
           SLFPFLQAWLYVKEHRNLMRWFR+ GSFINE K AKE+
Sbjct: 241 SLFPFLQAWLYVKEHRNLMRWFRSAGSFINERKGAKEN 230

[Close]

BLAST of ClCG08G008440.2 vs. ExPASy TrEMBL
Match: A0A0A0KCG3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G046350 PE=4 SV=1)

HSP 1 Score: 352.4 bits (903), Expect = 1.7e-93
Identity = 187/278 (67.27%), Postives = 206/278 (74.10%), Query Frame = 0


Query: 1   MLKKVMAATAVALQSSRRPSLMVTCRHSTSASSAVNSLLLRSLKEHYLEISRMTPPPKVS 60
           MLKK+MAA+AVAL+S  RPSLM TCRHSTSASSAVNS LLRSLKEHYLEI+RM  PPKVS
Sbjct: 1   MLKKMMAASAVALRSGTRPSLMFTCRHSTSASSAVNSFLLRSLKEHYLEITRMAAPPKVS 60

Query: 61  PPSSFSIIKGALDGKGPVLTRTYGKEEVNISVMRLANIIPGGGG--DDDEINQLFLYVTV 120
           PPSSFSII GALDG GPVLT+ YGKEE+NISVMRLANI+ GGGG  DDDEINQLFL+VTV
Sbjct: 61  PPSSFSIIVGALDGNGPVLTKNYGKEEINISVMRLANIVRGGGGGDDDDEINQLFLHVTV 120

Query: 121 SKPEQRDNLQFLCGLYPDALGIHSVSMRPKAEP--SGFFVIPSGYTGPVFDIFASFYEPK 180
           SK EQ+DNL FLCGLYPDALGIHSVSMRPKAE   SGF V+PS Y GP F+         
Sbjct: 121 SKLEQKDNLHFLCGLYPDALGIHSVSMRPKAESSGSGFLVVPSSYNGPTFE--------- 180

Query: 181 WDYDVFCLGCSFADNLCPITVDGKTCHKKTYTYFSLDDRDLDEKMRDVFHNYLEERGISE 240
                                                  DLDEKMRD+FHNY+EERG++E
Sbjct: 181 ---------------------------------------DLDEKMRDMFHNYIEERGVNE 230

Query: 241 SLFPFLQAWLYVKEHRNLMRWFRTVGSFINENKNAKED 275
           SLFPFLQAWLYVKEHRNL+RWFR+VG+FI E KN K+D
Sbjct: 241 SLFPFLQAWLYVKEHRNLLRWFRSVGTFIYEPKNGKKD 230

[Close]

BLAST of ClCG08G008440.2 vs. ExPASy TrEMBL
Match: A0A1S3C3N7 (uncharacterized protein At2g39795, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103496527 PE=4 SV=1)

HSP 1 Score: 347.8 bits (891), Expect = 4.1e-92
Identity = 183/278 (65.83%), Postives = 205/278 (73.74%), Query Frame = 0


Query: 1   MLKKVMAATAVALQSSRRPSLMVTCRHSTSASSAVNSLLLRSLKEHYLEISRMTPPPKVS 60
           ML K+MAATAVAL+S  RPSLMVTCRHSTSASSAVNS LLRSLKEHYLEI+RM  PPKVS
Sbjct: 1   MLNKLMAATAVALRSGSRPSLMVTCRHSTSASSAVNSFLLRSLKEHYLEITRMPAPPKVS 60

Query: 61  PPSSFSIIKGALDGKGPVLTRTYGKEEVNISVMRLANIIPGGGG--DDDEINQLFLYVTV 120
           PPSSFSII GALDG GPVLT+ YGKEEVNISVMRL+NI+ GGGG  DDD+INQLFL+V+V
Sbjct: 61  PPSSFSIITGALDGHGPVLTKNYGKEEVNISVMRLSNIVRGGGGDNDDDDINQLFLHVSV 120

Query: 121 SKPEQRDNLQFLCGLYPDALGIHSVSMRPKAEP--SGFFVIPSGYTGPVFDIFASFYEPK 180
           SKPEQ+D L FLCGLYPDALGIHSVSMRPK E   SGF ++PS Y GP F+         
Sbjct: 121 SKPEQKDTLHFLCGLYPDALGIHSVSMRPKGESSGSGFLLVPSSYNGPTFE--------- 180

Query: 181 WDYDVFCLGCSFADNLCPITVDGKTCHKKTYTYFSLDDRDLDEKMRDVFHNYLEERGISE 240
                                                  DLDEKMRD+FHNY++ERG++E
Sbjct: 181 ---------------------------------------DLDEKMRDMFHNYIDERGVNE 230

Query: 241 SLFPFLQAWLYVKEHRNLMRWFRTVGSFINENKNAKED 275
           SLFPFLQAWLYVKEHRNL+RWFR+VG+FI E KN K+D
Sbjct: 241 SLFPFLQAWLYVKEHRNLLRWFRSVGTFIYEPKNGKKD 230

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BLAST of ClCG08G008440.2 vs. TAIR 10
Match: AT4G32605.1 (Mitochondrial glycoprotein family protein )

HSP 1 Score: 246.1 bits (627), Expect = 3.2e-65
Identity = 139/274 (50.73%), Postives = 173/274 (63.14%), Query Frame = 0


Query: 1   MLKKVMAATAVALQSSRRPSLMV-TCRHSTSASSAVNSLLLRSLKEHYLEISRMTPPPKV 60
           M ++V+   AV  Q  R  S        S + S+AV+S+LLRSLKEHYLE+S+MTPPPKV
Sbjct: 1   MWRRVIGNVAVRHQLQRALSSKAGGSGKSANVSAAVDSMLLRSLKEHYLEVSKMTPPPKV 60

Query: 61  SPPSSFSIIKGALDGK-GPVLTRTYGKEEVNISVMRLANIIPGGGGDDDEINQLFLYVTV 120
           SPPS F I+KG+L+G  G VL ++ G EE+N+ VMRLA+   G   DD  INQLFL+V V
Sbjct: 61  SPPSPFEIVKGSLEGSTGAVLKKSVGNEEINLFVMRLAH--GGDEEDDGGINQLFLHVAV 120

Query: 121 SKPEQRDNLQFLCGLYPDALGIHSVSMRPKAEPSGFFVIPSGYTGPVFDIFASFYEPKWD 180
           SKP Q D+L FLCGLYPDALGIHSVSMRPK E       P+ YTGP F+           
Sbjct: 121 SKPNQPDSLHFLCGLYPDALGIHSVSMRPKLEALEMSDDPTQYTGPSFE----------- 180

Query: 181 YDVFCLGCSFADNLCPITVDGKTCHKKTYTYFSLDDRDLDEKMRDVFHNYLEERGISESL 240
                                                +LDEKMRDVFH +LEERG++ESL
Sbjct: 181 -------------------------------------ELDEKMRDVFHGFLEERGVNESL 224

Query: 241 FPFLQAWLYVKEHRNLMRWFRTVGSFINENKNAK 273
           FPFLQAWLYVK+HRNL+RWF++VG+F++EN +A+
Sbjct: 241 FPFLQAWLYVKDHRNLLRWFKSVGTFVHENPSAE 224

[Close]

BLAST of ClCG08G008440.2 vs. TAIR 10
Match: AT1G80720.1 (Mitochondrial glycoprotein family protein )

HSP 1 Score: 58.9 bits (141), Expect = 7.3e-09
Identity = 53/235 (22.55%), Postives = 90/235 (38.30%), Query Frame = 0


Query: 39  LLRSLKEHYLEISRMTPPPKVSPPSSFS--IIKGALDGKGPVLTRTYG-KEEVNISVMRL 98
           L+R+  E+ L+ S     P + PP+SF    +      +   L R +G KE++ I     
Sbjct: 13  LIRNEIEYELDHS-----PPLQPPNSFGPFTVDERPGEQWISLKRNFGDKEDIKIEATMF 72

Query: 99  ANIIPGGGGDDDE---INQLFLYVTVSKPEQRDNLQFLCGLYPDALGIHSVSMRPKAEPS 158
              +P       E   I  +   V +SK    + L+ +C  +PD + I  + +R      
Sbjct: 73  DRSVPTSKSTKTEPEYILHITFIVNISKAGATEALEIMCSAWPDTIEISKLCIR-----R 132

Query: 159 GFFVIPSGYTGPVFDIFASFYEPKWDYDVFCLGCSFADNLCPITVDGKTCHKKTYTYFSL 218
           G    PS Y GP F+                                             
Sbjct: 133 GINTSPSSYGGPEFE--------------------------------------------- 189

Query: 219 DDRDLDEKMRDVFHNYLEERGISESLFPFLQAWLYVKEHRNLMRWFRTVGSFINE 268
              +LD++++D  + +LEERGIS+ L  FL  ++  K     +RW  +V S++ +
Sbjct: 193 ---ELDDQLQDALYQFLEERGISDELAVFLHRYMKNKGKAEYVRWMESVKSYVEQ 189

[Close]

BLAST of ClCG08G008440.2 vs. TAIR 10
Match: AT1G15870.1 (Mitochondrial glycoprotein family protein )

HSP 1 Score: 54.7 bits (130), Expect = 1.4e-07
Identity = 40/194 (20.62%), Postives = 77/194 (39.69%), Query Frame = 0


Query: 79  LTRTYG-KEEVNISVMRLANIIPGGGGDDDEINQLFLYVT----VSKPEQRDNLQFLCGL 138
           L R +G KE++ I        +P       +   + L++T    +SK +  + L+ +C  
Sbjct: 102 LRRKFGEKEDIKIEATMFDGSVPSSKSTTSDPEDVQLHITFIVNISKGD-GETLEIMCSA 161

Query: 139 YPDALGIHSVSMRPKAEPSGFFVIPSGYTGPVFDIFASFYEPKWDYDVFCLGCSFADNLC 198
           +PD + I    +R  ++ S     P+ Y GP F                           
Sbjct: 162 WPDTIQITKFFVRKSSQNS-----PNAYIGPEF--------------------------- 221

Query: 199 PITVDGKTCHKKTYTYFSLDDRDLDEKMRDVFHNYLEERGISESLFPFLQAWLYVKEHRN 258
                                ++++++++D  + +LEERGIS+ L  FL  ++  K+   
Sbjct: 222 ---------------------QEMEDELQDSVYRFLEERGISDDLAEFLHQYMKNKDKAE 241

Query: 259 LMRWFRTVGSFINE 268
            +RW  TV S++ +
Sbjct: 282 YIRWMETVKSYVEQ 241

[Close]

BLAST of ClCG08G008440.2 vs. TAIR 10
Match: AT5G05990.1 (Mitochondrial glycoprotein family protein )

HSP 1 Score: 52.8 bits (125), Expect = 5.2e-07
Identity = 56/240 (23.33%), Postives = 93/240 (38.75%), Query Frame = 0


Query: 28  STSASSAVNSLLLRSLKEHYLEISRMTPPPKV-SPPSSFSI-IKGALDGKGPVLTRTYGK 87
           ST   ++    LLR ++E      +     +V   PS F   ++    GK   LTR Y  
Sbjct: 51  STKKRASPTDPLLRIIEEEIGYAEKADDYHRVEETPSGFPFEMEDKPGGKIVTLTREYEG 110

Query: 88  EEVNISVMRLANIIPGGGGDDDEINQLFLYVTVSKPEQRDNLQFLCGLYPDALGIHSVSM 147
           E V + V  + N++ G   DD++  +          E  D                   +
Sbjct: 111 ETVKVEV-HMTNLVTGDKEDDEDDEE-----EAENEEDED---------------EDKPL 170

Query: 148 RPKAEPSGFFVIPSGYTGPVFDIFASFYEPKWDYDVFCLGCSFADNLCPITVDGKTCHKK 207
           +PK       V  S  TGP  +   + +  +    +  +  +F D+            K 
Sbjct: 171 KPKQSNVPLLVTLSKKTGPSLEFRCTAFPDR--IAIKDMWVTFPDD----------PSKD 230

Query: 208 TYTYFSLDDRDLDEKMRDVFHNYLEERGISESLFPFLQAWLYVKEHRNLMRWFRTVGSFI 266
              Y     R LDEK+R  FH Y+E RGI  S+  FL  ++  K+ R  + W +++ +F+
Sbjct: 231 ELAYEGPSFRVLDEKLRKAFHRYIEIRGIKPSMINFLHEYMINKDSREHLLWLKSLKNFV 257

[Close]

BLAST of ClCG08G008440.2 vs. TAIR 10
Match: AT3G55605.1 (Mitochondrial glycoprotein family protein )

HSP 1 Score: 50.8 bits (120), Expect = 2.0e-06
Identity = 26/79 (32.91%), Postives = 42/79 (53.16%), Query Frame = 0


Query: 195 ITVDGKTCHK------KTYTYFSLDDRDLDEKMRDVFHNYLEERGISESLFPFLQAWLYV 254
           I +DG + ++      +  TY   D ++LDE MR  FH +LE RGI  S   FL  ++  
Sbjct: 180 IVIDGLSVNRPDDSSEEQLTYDGPDFQELDENMRKSFHKFLETRGIKASATDFLYEYMMK 239

Query: 255 KEHRNLMRWFRTVGSFINE 268
           K+ R  + W + + +F+ E
Sbjct: 240 KDSREYLLWLKKLKTFVQE 258

The following BLAST results are available for this feature:

BLAST of ClCG08G008440.2 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022938797.1	1.2e-101	71.38	uncharacterized protein At2g39795, mitochondrial [Cucurbita moschata] >KAG657883...	[more]
XP_038884404.1	1.5e-101	72.83	uncharacterized protein At2g39795, mitochondrial [Benincasa hispida]	[more]
XP_023549717.1	1.4e-99	70.65	uncharacterized protein At2g39795, mitochondrial [Cucurbita pepo subsp. pepo]	[more]
XP_022992760.1	1.9e-99	70.29	uncharacterized protein At2g39795, mitochondrial [Cucurbita maxima]	[more]
XP_022134253.1	5.1e-97	69.06	uncharacterized protein At2g39795, mitochondrial [Momordica charantia]	[more]

BLAST of ClCG08G008440.2 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O94675	1.1e-04	35.48	Mitochondrial acidic protein mam33 OS=Schizosaccharomyces pombe (strain 972 / AT...	[more]

BLAST of ClCG08G008440.2 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FF36	5.7e-102	71.38	uncharacterized protein At2g39795, mitochondrial OS=Cucurbita moschata OX=3662 G...	[more]
A0A6J1JWM0	9.1e-100	70.29	uncharacterized protein At2g39795, mitochondrial OS=Cucurbita maxima OX=3661 GN=...	[more]
A0A6J1C1F6	2.5e-97	69.06	uncharacterized protein At2g39795, mitochondrial OS=Momordica charantia OX=3673 ...	[more]
A0A0A0KCG3	1.7e-93	67.27	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G046350 PE=4 SV=1	[more]
A0A1S3C3N7	4.1e-92	65.83	uncharacterized protein At2g39795, mitochondrial OS=Cucumis melo OX=3656 GN=LOC1...	[more]

BLAST of ClCG08G008440.2 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G32605.1	3.2e-65	50.73	Mitochondrial glycoprotein family protein	[more]
AT1G80720.1	7.3e-09	22.55	Mitochondrial glycoprotein family protein	[more]
AT1G15870.1	1.4e-07	20.62	Mitochondrial glycoprotein family protein	[more]
AT5G05990.1	5.2e-07	23.33	Mitochondrial glycoprotein family protein	[more]
AT3G55605.1	2.0e-06	32.91	Mitochondrial glycoprotein family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003428	Mitochondrial glycoprotein	PFAM	PF02330	MAM33	coord: 215..265 e-value: 1.7E-11 score: 44.5
IPR036561	Mitochondrial glycoprotein superfamily	GENE3D	3.10.280.10	Mitochondrial glycoprotein	coord: 37..265 e-value: 2.1E-24 score: 88.4
IPR036561	Mitochondrial glycoprotein superfamily	SUPERFAMILY	54529	Mitochondrial glycoprotein MAM33-like	coord: 41..266
None	No IPR available	PANTHER	PTHR31365	EXPRESSED PROTEIN	coord: 1..270
None	No IPR available	PANTHER	PTHR31365:SF2	MITOCHONDRIAL GLYCOPROTEIN FAMILY PROTEIN-LIKE	coord: 1..270

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
ClCG08G008440	ClCG08G008440	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
ClCG08G008440.2-exon	ClCG08G008440.2-exon-CG_Chr08:20932005..20932329	exon
ClCG08G008440.2-exon	ClCG08G008440.2-exon-CG_Chr08:20933200..20933528	exon
ClCG08G008440.2-exon	ClCG08G008440.2-exon-CG_Chr08:20933650..20933851	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
ClCG08G008440.2-cds	ClCG08G008440.2-cds-CG_Chr08:20932005..20932329	CDS
ClCG08G008440.2-cds	ClCG08G008440.2-cds-CG_Chr08:20933200..20933528	CDS
ClCG08G008440.2-cds	ClCG08G008440.2-cds-CG_Chr08:20933650..20933820	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
ClCG08G008440.2-five_prime_utr	ClCG08G008440.2-five_prime_utr-CG_Chr08:20933821..20933851	five_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
ClCG08G008440.2	ClCG08G008440.2-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005759	mitochondrial matrix