ClCG08G008440.2 (mRNA) Watermelon (Charleston Gray) v2.5

Overview
NameClCG08G008440.2
TypemRNA
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionMitochondrial acidic protein
LocationCG_Chr08: 20932005 .. 20933851 (-)
Sequence length856
RNA-Seq ExpressionClCG08G008440.2
SyntenyClCG08G008440.2
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ACACAAACCACCACAACAAAATCGGAGGAAAATGTTGAAGAAAGTGATGGCCGCCACTGCGGTGGCTCTTCAGAGTAGCCGCCGGCCGTCTCTCATGGTCACTTGCCGCCATTCGACCTCCGCGTCCTCTGCCGTCAACTCGTTGCTCCTCCGCTCCCTCAAAGAACACTATCTCGAGATCTCCAGAATGACGCCTCCTCCGGTATGATTTCCATTGTTCTGTTCTCTGTTCTCTGTTTTCAATCACCAAACCCTAAAATTAGGGTTTTAAGCTATTCAAATGTCGTTTGTTCGTCTTACTTGGCTACTTGTTTTTATTGCAGAAAGTGAGCCCTCCTTCTTCCTTTTCTATCATTAAAGGCGCACTAGACGGCAAAGGACCGGTGCTTACTAGAACCTACGGTAAAGAAGAGGTTAACATTTCGGTTATGCGATTGGCTAATATTATTCCGGGAGGTGGTGGAGACGACGATGAAATTAACCAGTTGTTTCTTTATGTGACGGTATCGAAGCCGGAGCAGAGGGATAATTTGCAATTTCTTTGTGGGTTGTATCCTGATGCATTAGGTATTCATTCCGTTTCGATGAGACCGAAGGCCGAACCCTCGGGGTTTTTCGTTATTCCGTCCGGCTATACTGGCCCCGTATTCGAGTAAGTTTAATGTCTTCTAATTGTTTAGCCTCAATTATATTGGAGTTTGTTGTCTCAGATTGTATGTTTTTGGTGGTAGTTCATCAATTAGAGAAATGCTTGTAATTTAGATCCCGTCTTAATTTTTAGTGTTATCGACTAAACTAACAAGAACTGAATCATTTTATCGTGGTAAAGTAATTGAAGGAGTAAGGTATGAATTAAGATCTAATTGAAGGTCATGAGTTCAAGTTTTGTTGCTGCATACGATTTGCTCCCAAATAACCTGTAACTTGAACTGAACAAGATAAACACAACCAATTTGGTAATGAATCTATCCTGATTTCTGGGTTGTTGGTTTGTTTCGTTGGTTATAAGTAATCAGCTAATTTTTCTTAAGTAATTATTGTTTATTGCCTAAGGCGCTTATCATTTTTAGTCTGCACTCTTTGAATCTTCATTTGCAGCTCCCTGTTTAGTTCCTTCATTTGCAGGCTACAGCCACTGATTTCTTTTCTTTGGTTACAAACTCAGACTTTGTTTTTCGCTCCCACCACTGATTTAATTTCTTCTCTTTCAGTTGATCAACTCCCTCATATCATGTTATTCACTCACTTGAGATGCTTGCATCCTATCCCCTAGCATCATACTTCATAGCATAGTGCAAATTTGCAGATTTTAATGAGTTAGTACTCTTTGGTTTGGTTGTAATTCTGCGGCTCTCTTGGTTGACTTGGCTTGTGTTCTTGTATGACCCAGTTATATAATCCTTTTGTTTTCCTTTTATGAAAGCCATCTCTTATTTAAAGGTTTTTCTTGGAGATGCCTGTTCATCATAATTGGCCTAGAAATGGTATCTAAGGATCATGATGGTAGTTTTTCTTTTCACAGCATATTTGCCAGTTTCTATGAACCCAAGTGGGATTATGATGTTTTCTGCCTTGGATGTTCATTTGCTGATAATCTTTGCCCAATTACCGTTGATGGAAAAACATGCCATAAGAAAACTTACACTTATTTTTCTTTGGATGACAGAGATCTAGATGAGAAAATGCGAGATGTATTTCACAATTATTTAGAAGAGCGAGGTATAAGTGAGTCTCTTTTCCCATTTCTTCAAGCATGGCTTTATGTGAAAGAACATCGAAATCTTATGCGGTGGTTCAGAACGGTTGGCTCATTCATCAATGAGAACAAGAACGCTAAAGAGGATTGA

mRNA sequence

ACACAAACCACCACAACAAAATCGGAGGAAAATGTTGAAGAAAGTGATGGCCGCCACTGCGGTGGCTCTTCAGAGTAGCCGCCGGCCGTCTCTCATGGTCACTTGCCGCCATTCGACCTCCGCGTCCTCTGCCGTCAACTCGTTGCTCCTCCGCTCCCTCAAAGAACACTATCTCGAGATCTCCAGAATGACGCCTCCTCCGAAAGTGAGCCCTCCTTCTTCCTTTTCTATCATTAAAGGCGCACTAGACGGCAAAGGACCGGTGCTTACTAGAACCTACGGTAAAGAAGAGGTTAACATTTCGGTTATGCGATTGGCTAATATTATTCCGGGAGGTGGTGGAGACGACGATGAAATTAACCAGTTGTTTCTTTATGTGACGGTATCGAAGCCGGAGCAGAGGGATAATTTGCAATTTCTTTGTGGGTTGTATCCTGATGCATTAGGTATTCATTCCGTTTCGATGAGACCGAAGGCCGAACCCTCGGGGTTTTTCGTTATTCCGTCCGGCTATACTGGCCCCGTATTCGACATATTTGCCAGTTTCTATGAACCCAAGTGGGATTATGATGTTTTCTGCCTTGGATGTTCATTTGCTGATAATCTTTGCCCAATTACCGTTGATGGAAAAACATGCCATAAGAAAACTTACACTTATTTTTCTTTGGATGACAGAGATCTAGATGAGAAAATGCGAGATGTATTTCACAATTATTTAGAAGAGCGAGGTATAAGTGAGTCTCTTTTCCCATTTCTTCAAGCATGGCTTTATGTGAAAGAACATCGAAATCTTATGCGGTGGTTCAGAACGGTTGGCTCATTCATCAATGAGAACAAGAACGCTAAAGAGGATTGA

Coding sequence (CDS)

ATGTTGAAGAAAGTGATGGCCGCCACTGCGGTGGCTCTTCAGAGTAGCCGCCGGCCGTCTCTCATGGTCACTTGCCGCCATTCGACCTCCGCGTCCTCTGCCGTCAACTCGTTGCTCCTCCGCTCCCTCAAAGAACACTATCTCGAGATCTCCAGAATGACGCCTCCTCCGAAAGTGAGCCCTCCTTCTTCCTTTTCTATCATTAAAGGCGCACTAGACGGCAAAGGACCGGTGCTTACTAGAACCTACGGTAAAGAAGAGGTTAACATTTCGGTTATGCGATTGGCTAATATTATTCCGGGAGGTGGTGGAGACGACGATGAAATTAACCAGTTGTTTCTTTATGTGACGGTATCGAAGCCGGAGCAGAGGGATAATTTGCAATTTCTTTGTGGGTTGTATCCTGATGCATTAGGTATTCATTCCGTTTCGATGAGACCGAAGGCCGAACCCTCGGGGTTTTTCGTTATTCCGTCCGGCTATACTGGCCCCGTATTCGACATATTTGCCAGTTTCTATGAACCCAAGTGGGATTATGATGTTTTCTGCCTTGGATGTTCATTTGCTGATAATCTTTGCCCAATTACCGTTGATGGAAAAACATGCCATAAGAAAACTTACACTTATTTTTCTTTGGATGACAGAGATCTAGATGAGAAAATGCGAGATGTATTTCACAATTATTTAGAAGAGCGAGGTATAAGTGAGTCTCTTTTCCCATTTCTTCAAGCATGGCTTTATGTGAAAGAACATCGAAATCTTATGCGGTGGTTCAGAACGGTTGGCTCATTCATCAATGAGAACAAGAACGCTAAAGAGGATTGA

Protein sequence

MLKKVMAATAVALQSSRRPSLMVTCRHSTSASSAVNSLLLRSLKEHYLEISRMTPPPKVSPPSSFSIIKGALDGKGPVLTRTYGKEEVNISVMRLANIIPGGGGDDDEINQLFLYVTVSKPEQRDNLQFLCGLYPDALGIHSVSMRPKAEPSGFFVIPSGYTGPVFDIFASFYEPKWDYDVFCLGCSFADNLCPITVDGKTCHKKTYTYFSLDDRDLDEKMRDVFHNYLEERGISESLFPFLQAWLYVKEHRNLMRWFRTVGSFINENKNAKED
Homology
BLAST of ClCG08G008440.2 vs. NCBI nr
Match: XP_022938797.1 (uncharacterized protein At2g39795, mitochondrial [Cucurbita moschata] >KAG6578831.1 putative protein, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia] >KAG7016357.1 putative protein, mitochondrial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 380.6 bits (976), Expect = 1.2e-101
Identity = 197/276 (71.38%), Postives = 212/276 (76.81%), Query Frame = 0

Query: 1   MLKKVMAATAVALQSSRRPSLMVTCRHSTSASSAVNSLLLRSLKEHYLEISRMTPPPKVS 60
           MLKKV A  AVAL+ S RPSLM TCRHSTS S+AVNSLLLRSLKEHYLEISRMTPPPKVS
Sbjct: 1   MLKKVTAVAAVALRGSHRPSLMATCRHSTSVSTAVNSLLLRSLKEHYLEISRMTPPPKVS 60

Query: 61  PPSSFSIIKGALDGKGPVLTRTYGKEEVNISVMRLANIIPGGGGD--DDEINQLFLYVTV 120
           PPSSFSIIKGALDG GPVLTR+YG EE+N+SVMRLANI+PGGGGD  DDEINQLFL++TV
Sbjct: 61  PPSSFSIIKGALDGNGPVLTRSYGNEEINVSVMRLANIVPGGGGDDGDDEINQLFLHLTV 120

Query: 121 SKPEQRDNLQFLCGLYPDALGIHSVSMRPKAEPSGFFVIPSGYTGPVFDIFASFYEPKWD 180
           SKPEQR++L FLCGLYPDALGIHSVSMRPKAE SGF V+PSGY GPVF+           
Sbjct: 121 SKPEQRESLHFLCGLYPDALGIHSVSMRPKAESSGFLVVPSGYNGPVFE----------- 180

Query: 181 YDVFCLGCSFADNLCPITVDGKTCHKKTYTYFSLDDRDLDEKMRDVFHNYLEERGISESL 240
                                                DLDEKMRDVFHNY+EERGI+ESL
Sbjct: 181 -------------------------------------DLDEKMRDVFHNYIEERGINESL 228

Query: 241 FPFLQAWLYVKEHRNLMRWFRTVGSFINENKNAKED 275
           FPFLQAWLYVKEHRNLMRWFR+VGSFINE KNAKED
Sbjct: 241 FPFLQAWLYVKEHRNLMRWFRSVGSFINERKNAKED 228

BLAST of ClCG08G008440.2 vs. NCBI nr
Match: XP_038884404.1 (uncharacterized protein At2g39795, mitochondrial [Benincasa hispida])

HSP 1 Score: 380.2 bits (975), Expect = 1.5e-101
Identity = 201/276 (72.83%), Postives = 215/276 (77.90%), Query Frame = 0

Query: 1   MLKKVMAATAVALQSSRRPSLMVTCRHSTSASSAVNSLLLRSLKEHYLEISRMTPPPKVS 60
           MLKK MAATAVAL+ SRRPSLMVTCRHSTS +SAVNSLLLRSLKEHYLEISRMTPPPKVS
Sbjct: 1   MLKKAMAATAVALR-SRRPSLMVTCRHSTSVTSAVNSLLLRSLKEHYLEISRMTPPPKVS 60

Query: 61  PPSSFSIIKGALDGKGPVLTRTYGKEEVNISVMRLANIIPGGGGD--DDEINQLFLYVTV 120
           PPSSFSII+GALDG GPVLTR YGKEEV ISVMRLANI+PGGGGD  DDEINQLFL+VTV
Sbjct: 61  PPSSFSIIQGALDGNGPVLTRNYGKEEVKISVMRLANIVPGGGGDDGDDEINQLFLHVTV 120

Query: 121 SKPEQRDNLQFLCGLYPDALGIHSVSMRPKAEPSGFFVIPSGYTGPVFDIFASFYEPKWD 180
           SK EQ+D+L FLCGLYPDALGIHSVSMRPKAE SGF V+PSGY GPVF+           
Sbjct: 121 SKLEQKDDLHFLCGLYPDALGIHSVSMRPKAESSGFLVVPSGYNGPVFE----------- 180

Query: 181 YDVFCLGCSFADNLCPITVDGKTCHKKTYTYFSLDDRDLDEKMRDVFHNYLEERGISESL 240
                                                DLDEKMRD+FHNY+EERGI+ESL
Sbjct: 181 -------------------------------------DLDEKMRDIFHNYIEERGINESL 227

Query: 241 FPFLQAWLYVKEHRNLMRWFRTVGSFINENKNAKED 275
           FPFLQAWLYVKEHRNLMRWFR+VGSFINE+KNAKED
Sbjct: 241 FPFLQAWLYVKEHRNLMRWFRSVGSFINEHKNAKED 227

BLAST of ClCG08G008440.2 vs. NCBI nr
Match: XP_023549717.1 (uncharacterized protein At2g39795, mitochondrial [Cucurbita pepo subsp. pepo])

HSP 1 Score: 373.6 bits (958), Expect = 1.4e-99
Identity = 195/276 (70.65%), Postives = 210/276 (76.09%), Query Frame = 0

Query: 1   MLKKVMAATAVALQSSRRPSLMVTCRHSTSASSAVNSLLLRSLKEHYLEISRMTPPPKVS 60
           MLKKV A  AVAL+ SRRPSLM TCR STS S+AVNSLLLRSLKEHYLEISRMTPPPKVS
Sbjct: 1   MLKKVTAVAAVALRGSRRPSLMATCRRSTSVSTAVNSLLLRSLKEHYLEISRMTPPPKVS 60

Query: 61  PPSSFSIIKGALDGKGPVLTRTYGKEEVNISVMRLANIIPGGGGD--DDEINQLFLYVTV 120
           PPSSFSIIKGALDG GPVLTR+YG EE+N+SVMRLANI+PGGGGD  DDEINQLFL++TV
Sbjct: 61  PPSSFSIIKGALDGNGPVLTRSYGNEEINVSVMRLANIVPGGGGDDGDDEINQLFLHLTV 120

Query: 121 SKPEQRDNLQFLCGLYPDALGIHSVSMRPKAEPSGFFVIPSGYTGPVFDIFASFYEPKWD 180
           SKPEQR++L FLCGLYPDALGIHSVSMRPKAE SGF V+PSGY GPVF+           
Sbjct: 121 SKPEQRESLHFLCGLYPDALGIHSVSMRPKAESSGFLVVPSGYNGPVFE----------- 180

Query: 181 YDVFCLGCSFADNLCPITVDGKTCHKKTYTYFSLDDRDLDEKMRDVFHNYLEERGISESL 240
                                                DLDEKMRDV HNY+EERGI+ESL
Sbjct: 181 -------------------------------------DLDEKMRDVLHNYIEERGINESL 228

Query: 241 FPFLQAWLYVKEHRNLMRWFRTVGSFINENKNAKED 275
           FPFLQAWLYVKEHRNLMRWFR+VGSFINE KNAK D
Sbjct: 241 FPFLQAWLYVKEHRNLMRWFRSVGSFINEPKNAKVD 228

BLAST of ClCG08G008440.2 vs. NCBI nr
Match: XP_022992760.1 (uncharacterized protein At2g39795, mitochondrial [Cucurbita maxima])

HSP 1 Score: 373.2 bits (957), Expect = 1.9e-99
Identity = 194/276 (70.29%), Postives = 210/276 (76.09%), Query Frame = 0

Query: 1   MLKKVMAATAVALQSSRRPSLMVTCRHSTSASSAVNSLLLRSLKEHYLEISRMTPPPKVS 60
           MLKKV A  AVAL+ S RPSLM TCRHST+ S+AVNSLLLRSLKEHYLEISRMTPPPKVS
Sbjct: 1   MLKKVTAVAAVALRGSHRPSLMATCRHSTTVSTAVNSLLLRSLKEHYLEISRMTPPPKVS 60

Query: 61  PPSSFSIIKGALDGKGPVLTRTYGKEEVNISVMRLANIIPGGGGD--DDEINQLFLYVTV 120
           PPSSFSIIKGALDG GPVLTR+YG EE+N+SVMRLANI+PGGGGD  DDEINQLFL+VTV
Sbjct: 61  PPSSFSIIKGALDGNGPVLTRSYGNEEINVSVMRLANIVPGGGGDDGDDEINQLFLHVTV 120

Query: 121 SKPEQRDNLQFLCGLYPDALGIHSVSMRPKAEPSGFFVIPSGYTGPVFDIFASFYEPKWD 180
           SKPEQR++L FLCGLYPDALGIHSVSMRPKAE SGF V+PSGY GPVF+           
Sbjct: 121 SKPEQRESLHFLCGLYPDALGIHSVSMRPKAESSGFLVVPSGYNGPVFE----------- 180

Query: 181 YDVFCLGCSFADNLCPITVDGKTCHKKTYTYFSLDDRDLDEKMRDVFHNYLEERGISESL 240
                                                DLDEKMRDV HNY+EERGI++SL
Sbjct: 181 -------------------------------------DLDEKMRDVLHNYIEERGINQSL 228

Query: 241 FPFLQAWLYVKEHRNLMRWFRTVGSFINENKNAKED 275
           F FLQAWLYVKEHRNLMRWFR+VGSFINE KNAKED
Sbjct: 241 FSFLQAWLYVKEHRNLMRWFRSVGSFINEPKNAKED 228

BLAST of ClCG08G008440.2 vs. NCBI nr
Match: XP_022134253.1 (uncharacterized protein At2g39795, mitochondrial [Momordica charantia])

HSP 1 Score: 365.2 bits (936), Expect = 5.1e-97
Identity = 192/278 (69.06%), Postives = 208/278 (74.82%), Query Frame = 0

Query: 1   MLKKVMAATAVALQSSRRPSLMVTC-RHSTSASSAVNSLLLRSLKEHYLEISRMTPPPKV 60
           M+KK++A  A ALQS RRPSLM TC RHSTS SSAVNSLLLRSLKEHYLEISRMTPPPKV
Sbjct: 1   MMKKLIAVAAEALQSRRRPSLMTTCRRHSTSVSSAVNSLLLRSLKEHYLEISRMTPPPKV 60

Query: 61  SPPSSFSIIKGALDGKGPVLTRTYGKEEVNISVMRLANIIPGGGGDDD---EINQLFLYV 120
           SPPS FSIIKGALD  GPVLTR +G+EEVNISVMRLANI+PGGGGDDD   EINQLFL+V
Sbjct: 61  SPPSPFSIIKGALDSNGPVLTRNFGEEEVNISVMRLANIVPGGGGDDDGDEEINQLFLHV 120

Query: 121 TVSKPEQRDNLQFLCGLYPDALGIHSVSMRPKAEPSGFFVIPSGYTGPVFDIFASFYEPK 180
           TVSKPEQRDNL FLCGLYPDALGIHSVSMRP+AE SGF V+PSGY GPVF+         
Sbjct: 121 TVSKPEQRDNLHFLCGLYPDALGIHSVSMRPRAESSGFLVVPSGYNGPVFE--------- 180

Query: 181 WDYDVFCLGCSFADNLCPITVDGKTCHKKTYTYFSLDDRDLDEKMRDVFHNYLEERGISE 240
                                                  DLDEKMRDV HNY++ERG++E
Sbjct: 181 ---------------------------------------DLDEKMRDVLHNYIDERGVNE 230

Query: 241 SLFPFLQAWLYVKEHRNLMRWFRTVGSFINENKNAKED 275
           SLFPFLQAWLYVKEHRNLMRWFR+ GSFINE K AKE+
Sbjct: 241 SLFPFLQAWLYVKEHRNLMRWFRSAGSFINERKGAKEN 230

BLAST of ClCG08G008440.2 vs. ExPASy Swiss-Prot
Match: O94675 (Mitochondrial acidic protein mam33 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPBC776.07 PE=3 SV=1)

HSP 1 Score: 48.9 bits (115), Expect = 1.1e-04
Identity = 22/62 (35.48%), Postives = 37/62 (59.68%), Query Frame = 0

Query: 204 KKTYTYFSLDDRDLDEKMRDVFHNYLEERGISESLFPFLQAWLYVKEHRNLMRWFRTVGS 263
           K+   Y     ++LD +++D+FH+YLEER I ESL  F+ ++   KE +  + W  +V  
Sbjct: 207 KRRKQYLGPSFKELDPELQDLFHSYLEERKIDESLSSFIVSFGLTKELKEYINWLESVRQ 266

Query: 264 FI 266
           F+
Sbjct: 267 FL 268

BLAST of ClCG08G008440.2 vs. ExPASy TrEMBL
Match: A0A6J1FF36 (uncharacterized protein At2g39795, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111444904 PE=4 SV=1)

HSP 1 Score: 380.6 bits (976), Expect = 5.7e-102
Identity = 197/276 (71.38%), Postives = 212/276 (76.81%), Query Frame = 0

Query: 1   MLKKVMAATAVALQSSRRPSLMVTCRHSTSASSAVNSLLLRSLKEHYLEISRMTPPPKVS 60
           MLKKV A  AVAL+ S RPSLM TCRHSTS S+AVNSLLLRSLKEHYLEISRMTPPPKVS
Sbjct: 1   MLKKVTAVAAVALRGSHRPSLMATCRHSTSVSTAVNSLLLRSLKEHYLEISRMTPPPKVS 60

Query: 61  PPSSFSIIKGALDGKGPVLTRTYGKEEVNISVMRLANIIPGGGGD--DDEINQLFLYVTV 120
           PPSSFSIIKGALDG GPVLTR+YG EE+N+SVMRLANI+PGGGGD  DDEINQLFL++TV
Sbjct: 61  PPSSFSIIKGALDGNGPVLTRSYGNEEINVSVMRLANIVPGGGGDDGDDEINQLFLHLTV 120

Query: 121 SKPEQRDNLQFLCGLYPDALGIHSVSMRPKAEPSGFFVIPSGYTGPVFDIFASFYEPKWD 180
           SKPEQR++L FLCGLYPDALGIHSVSMRPKAE SGF V+PSGY GPVF+           
Sbjct: 121 SKPEQRESLHFLCGLYPDALGIHSVSMRPKAESSGFLVVPSGYNGPVFE----------- 180

Query: 181 YDVFCLGCSFADNLCPITVDGKTCHKKTYTYFSLDDRDLDEKMRDVFHNYLEERGISESL 240
                                                DLDEKMRDVFHNY+EERGI+ESL
Sbjct: 181 -------------------------------------DLDEKMRDVFHNYIEERGINESL 228

Query: 241 FPFLQAWLYVKEHRNLMRWFRTVGSFINENKNAKED 275
           FPFLQAWLYVKEHRNLMRWFR+VGSFINE KNAKED
Sbjct: 241 FPFLQAWLYVKEHRNLMRWFRSVGSFINERKNAKED 228

BLAST of ClCG08G008440.2 vs. ExPASy TrEMBL
Match: A0A6J1JWM0 (uncharacterized protein At2g39795, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111489000 PE=4 SV=1)

HSP 1 Score: 373.2 bits (957), Expect = 9.1e-100
Identity = 194/276 (70.29%), Postives = 210/276 (76.09%), Query Frame = 0

Query: 1   MLKKVMAATAVALQSSRRPSLMVTCRHSTSASSAVNSLLLRSLKEHYLEISRMTPPPKVS 60
           MLKKV A  AVAL+ S RPSLM TCRHST+ S+AVNSLLLRSLKEHYLEISRMTPPPKVS
Sbjct: 1   MLKKVTAVAAVALRGSHRPSLMATCRHSTTVSTAVNSLLLRSLKEHYLEISRMTPPPKVS 60

Query: 61  PPSSFSIIKGALDGKGPVLTRTYGKEEVNISVMRLANIIPGGGGD--DDEINQLFLYVTV 120
           PPSSFSIIKGALDG GPVLTR+YG EE+N+SVMRLANI+PGGGGD  DDEINQLFL+VTV
Sbjct: 61  PPSSFSIIKGALDGNGPVLTRSYGNEEINVSVMRLANIVPGGGGDDGDDEINQLFLHVTV 120

Query: 121 SKPEQRDNLQFLCGLYPDALGIHSVSMRPKAEPSGFFVIPSGYTGPVFDIFASFYEPKWD 180
           SKPEQR++L FLCGLYPDALGIHSVSMRPKAE SGF V+PSGY GPVF+           
Sbjct: 121 SKPEQRESLHFLCGLYPDALGIHSVSMRPKAESSGFLVVPSGYNGPVFE----------- 180

Query: 181 YDVFCLGCSFADNLCPITVDGKTCHKKTYTYFSLDDRDLDEKMRDVFHNYLEERGISESL 240
                                                DLDEKMRDV HNY+EERGI++SL
Sbjct: 181 -------------------------------------DLDEKMRDVLHNYIEERGINQSL 228

Query: 241 FPFLQAWLYVKEHRNLMRWFRTVGSFINENKNAKED 275
           F FLQAWLYVKEHRNLMRWFR+VGSFINE KNAKED
Sbjct: 241 FSFLQAWLYVKEHRNLMRWFRSVGSFINEPKNAKED 228

BLAST of ClCG08G008440.2 vs. ExPASy TrEMBL
Match: A0A6J1C1F6 (uncharacterized protein At2g39795, mitochondrial OS=Momordica charantia OX=3673 GN=LOC111006555 PE=4 SV=1)

HSP 1 Score: 365.2 bits (936), Expect = 2.5e-97
Identity = 192/278 (69.06%), Postives = 208/278 (74.82%), Query Frame = 0

Query: 1   MLKKVMAATAVALQSSRRPSLMVTC-RHSTSASSAVNSLLLRSLKEHYLEISRMTPPPKV 60
           M+KK++A  A ALQS RRPSLM TC RHSTS SSAVNSLLLRSLKEHYLEISRMTPPPKV
Sbjct: 1   MMKKLIAVAAEALQSRRRPSLMTTCRRHSTSVSSAVNSLLLRSLKEHYLEISRMTPPPKV 60

Query: 61  SPPSSFSIIKGALDGKGPVLTRTYGKEEVNISVMRLANIIPGGGGDDD---EINQLFLYV 120
           SPPS FSIIKGALD  GPVLTR +G+EEVNISVMRLANI+PGGGGDDD   EINQLFL+V
Sbjct: 61  SPPSPFSIIKGALDSNGPVLTRNFGEEEVNISVMRLANIVPGGGGDDDGDEEINQLFLHV 120

Query: 121 TVSKPEQRDNLQFLCGLYPDALGIHSVSMRPKAEPSGFFVIPSGYTGPVFDIFASFYEPK 180
           TVSKPEQRDNL FLCGLYPDALGIHSVSMRP+AE SGF V+PSGY GPVF+         
Sbjct: 121 TVSKPEQRDNLHFLCGLYPDALGIHSVSMRPRAESSGFLVVPSGYNGPVFE--------- 180

Query: 181 WDYDVFCLGCSFADNLCPITVDGKTCHKKTYTYFSLDDRDLDEKMRDVFHNYLEERGISE 240
                                                  DLDEKMRDV HNY++ERG++E
Sbjct: 181 ---------------------------------------DLDEKMRDVLHNYIDERGVNE 230

Query: 241 SLFPFLQAWLYVKEHRNLMRWFRTVGSFINENKNAKED 275
           SLFPFLQAWLYVKEHRNLMRWFR+ GSFINE K AKE+
Sbjct: 241 SLFPFLQAWLYVKEHRNLMRWFRSAGSFINERKGAKEN 230

BLAST of ClCG08G008440.2 vs. ExPASy TrEMBL
Match: A0A0A0KCG3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G046350 PE=4 SV=1)

HSP 1 Score: 352.4 bits (903), Expect = 1.7e-93
Identity = 187/278 (67.27%), Postives = 206/278 (74.10%), Query Frame = 0

Query: 1   MLKKVMAATAVALQSSRRPSLMVTCRHSTSASSAVNSLLLRSLKEHYLEISRMTPPPKVS 60
           MLKK+MAA+AVAL+S  RPSLM TCRHSTSASSAVNS LLRSLKEHYLEI+RM  PPKVS
Sbjct: 1   MLKKMMAASAVALRSGTRPSLMFTCRHSTSASSAVNSFLLRSLKEHYLEITRMAAPPKVS 60

Query: 61  PPSSFSIIKGALDGKGPVLTRTYGKEEVNISVMRLANIIPGGGG--DDDEINQLFLYVTV 120
           PPSSFSII GALDG GPVLT+ YGKEE+NISVMRLANI+ GGGG  DDDEINQLFL+VTV
Sbjct: 61  PPSSFSIIVGALDGNGPVLTKNYGKEEINISVMRLANIVRGGGGGDDDDEINQLFLHVTV 120

Query: 121 SKPEQRDNLQFLCGLYPDALGIHSVSMRPKAEP--SGFFVIPSGYTGPVFDIFASFYEPK 180
           SK EQ+DNL FLCGLYPDALGIHSVSMRPKAE   SGF V+PS Y GP F+         
Sbjct: 121 SKLEQKDNLHFLCGLYPDALGIHSVSMRPKAESSGSGFLVVPSSYNGPTFE--------- 180

Query: 181 WDYDVFCLGCSFADNLCPITVDGKTCHKKTYTYFSLDDRDLDEKMRDVFHNYLEERGISE 240
                                                  DLDEKMRD+FHNY+EERG++E
Sbjct: 181 ---------------------------------------DLDEKMRDMFHNYIEERGVNE 230

Query: 241 SLFPFLQAWLYVKEHRNLMRWFRTVGSFINENKNAKED 275
           SLFPFLQAWLYVKEHRNL+RWFR+VG+FI E KN K+D
Sbjct: 241 SLFPFLQAWLYVKEHRNLLRWFRSVGTFIYEPKNGKKD 230

BLAST of ClCG08G008440.2 vs. ExPASy TrEMBL
Match: A0A1S3C3N7 (uncharacterized protein At2g39795, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103496527 PE=4 SV=1)

HSP 1 Score: 347.8 bits (891), Expect = 4.1e-92
Identity = 183/278 (65.83%), Postives = 205/278 (73.74%), Query Frame = 0

Query: 1   MLKKVMAATAVALQSSRRPSLMVTCRHSTSASSAVNSLLLRSLKEHYLEISRMTPPPKVS 60
           ML K+MAATAVAL+S  RPSLMVTCRHSTSASSAVNS LLRSLKEHYLEI+RM  PPKVS
Sbjct: 1   MLNKLMAATAVALRSGSRPSLMVTCRHSTSASSAVNSFLLRSLKEHYLEITRMPAPPKVS 60

Query: 61  PPSSFSIIKGALDGKGPVLTRTYGKEEVNISVMRLANIIPGGGG--DDDEINQLFLYVTV 120
           PPSSFSII GALDG GPVLT+ YGKEEVNISVMRL+NI+ GGGG  DDD+INQLFL+V+V
Sbjct: 61  PPSSFSIITGALDGHGPVLTKNYGKEEVNISVMRLSNIVRGGGGDNDDDDINQLFLHVSV 120

Query: 121 SKPEQRDNLQFLCGLYPDALGIHSVSMRPKAEP--SGFFVIPSGYTGPVFDIFASFYEPK 180
           SKPEQ+D L FLCGLYPDALGIHSVSMRPK E   SGF ++PS Y GP F+         
Sbjct: 121 SKPEQKDTLHFLCGLYPDALGIHSVSMRPKGESSGSGFLLVPSSYNGPTFE--------- 180

Query: 181 WDYDVFCLGCSFADNLCPITVDGKTCHKKTYTYFSLDDRDLDEKMRDVFHNYLEERGISE 240
                                                  DLDEKMRD+FHNY++ERG++E
Sbjct: 181 ---------------------------------------DLDEKMRDMFHNYIDERGVNE 230

Query: 241 SLFPFLQAWLYVKEHRNLMRWFRTVGSFINENKNAKED 275
           SLFPFLQAWLYVKEHRNL+RWFR+VG+FI E KN K+D
Sbjct: 241 SLFPFLQAWLYVKEHRNLLRWFRSVGTFIYEPKNGKKD 230

BLAST of ClCG08G008440.2 vs. TAIR 10
Match: AT4G32605.1 (Mitochondrial glycoprotein family protein )

HSP 1 Score: 246.1 bits (627), Expect = 3.2e-65
Identity = 139/274 (50.73%), Postives = 173/274 (63.14%), Query Frame = 0

Query: 1   MLKKVMAATAVALQSSRRPSLMV-TCRHSTSASSAVNSLLLRSLKEHYLEISRMTPPPKV 60
           M ++V+   AV  Q  R  S        S + S+AV+S+LLRSLKEHYLE+S+MTPPPKV
Sbjct: 1   MWRRVIGNVAVRHQLQRALSSKAGGSGKSANVSAAVDSMLLRSLKEHYLEVSKMTPPPKV 60

Query: 61  SPPSSFSIIKGALDGK-GPVLTRTYGKEEVNISVMRLANIIPGGGGDDDEINQLFLYVTV 120
           SPPS F I+KG+L+G  G VL ++ G EE+N+ VMRLA+   G   DD  INQLFL+V V
Sbjct: 61  SPPSPFEIVKGSLEGSTGAVLKKSVGNEEINLFVMRLAH--GGDEEDDGGINQLFLHVAV 120

Query: 121 SKPEQRDNLQFLCGLYPDALGIHSVSMRPKAEPSGFFVIPSGYTGPVFDIFASFYEPKWD 180
           SKP Q D+L FLCGLYPDALGIHSVSMRPK E       P+ YTGP F+           
Sbjct: 121 SKPNQPDSLHFLCGLYPDALGIHSVSMRPKLEALEMSDDPTQYTGPSFE----------- 180

Query: 181 YDVFCLGCSFADNLCPITVDGKTCHKKTYTYFSLDDRDLDEKMRDVFHNYLEERGISESL 240
                                                +LDEKMRDVFH +LEERG++ESL
Sbjct: 181 -------------------------------------ELDEKMRDVFHGFLEERGVNESL 224

Query: 241 FPFLQAWLYVKEHRNLMRWFRTVGSFINENKNAK 273
           FPFLQAWLYVK+HRNL+RWF++VG+F++EN +A+
Sbjct: 241 FPFLQAWLYVKDHRNLLRWFKSVGTFVHENPSAE 224

BLAST of ClCG08G008440.2 vs. TAIR 10
Match: AT1G80720.1 (Mitochondrial glycoprotein family protein )

HSP 1 Score: 58.9 bits (141), Expect = 7.3e-09
Identity = 53/235 (22.55%), Postives = 90/235 (38.30%), Query Frame = 0

Query: 39  LLRSLKEHYLEISRMTPPPKVSPPSSFS--IIKGALDGKGPVLTRTYG-KEEVNISVMRL 98
           L+R+  E+ L+ S     P + PP+SF    +      +   L R +G KE++ I     
Sbjct: 13  LIRNEIEYELDHS-----PPLQPPNSFGPFTVDERPGEQWISLKRNFGDKEDIKIEATMF 72

Query: 99  ANIIPGGGGDDDE---INQLFLYVTVSKPEQRDNLQFLCGLYPDALGIHSVSMRPKAEPS 158
              +P       E   I  +   V +SK    + L+ +C  +PD + I  + +R      
Sbjct: 73  DRSVPTSKSTKTEPEYILHITFIVNISKAGATEALEIMCSAWPDTIEISKLCIR-----R 132

Query: 159 GFFVIPSGYTGPVFDIFASFYEPKWDYDVFCLGCSFADNLCPITVDGKTCHKKTYTYFSL 218
           G    PS Y GP F+                                             
Sbjct: 133 GINTSPSSYGGPEFE--------------------------------------------- 189

Query: 219 DDRDLDEKMRDVFHNYLEERGISESLFPFLQAWLYVKEHRNLMRWFRTVGSFINE 268
              +LD++++D  + +LEERGIS+ L  FL  ++  K     +RW  +V S++ +
Sbjct: 193 ---ELDDQLQDALYQFLEERGISDELAVFLHRYMKNKGKAEYVRWMESVKSYVEQ 189

BLAST of ClCG08G008440.2 vs. TAIR 10
Match: AT1G15870.1 (Mitochondrial glycoprotein family protein )

HSP 1 Score: 54.7 bits (130), Expect = 1.4e-07
Identity = 40/194 (20.62%), Postives = 77/194 (39.69%), Query Frame = 0

Query: 79  LTRTYG-KEEVNISVMRLANIIPGGGGDDDEINQLFLYVT----VSKPEQRDNLQFLCGL 138
           L R +G KE++ I        +P       +   + L++T    +SK +  + L+ +C  
Sbjct: 102 LRRKFGEKEDIKIEATMFDGSVPSSKSTTSDPEDVQLHITFIVNISKGD-GETLEIMCSA 161

Query: 139 YPDALGIHSVSMRPKAEPSGFFVIPSGYTGPVFDIFASFYEPKWDYDVFCLGCSFADNLC 198
           +PD + I    +R  ++ S     P+ Y GP F                           
Sbjct: 162 WPDTIQITKFFVRKSSQNS-----PNAYIGPEF--------------------------- 221

Query: 199 PITVDGKTCHKKTYTYFSLDDRDLDEKMRDVFHNYLEERGISESLFPFLQAWLYVKEHRN 258
                                ++++++++D  + +LEERGIS+ L  FL  ++  K+   
Sbjct: 222 ---------------------QEMEDELQDSVYRFLEERGISDDLAEFLHQYMKNKDKAE 241

Query: 259 LMRWFRTVGSFINE 268
            +RW  TV S++ +
Sbjct: 282 YIRWMETVKSYVEQ 241

BLAST of ClCG08G008440.2 vs. TAIR 10
Match: AT5G05990.1 (Mitochondrial glycoprotein family protein )

HSP 1 Score: 52.8 bits (125), Expect = 5.2e-07
Identity = 56/240 (23.33%), Postives = 93/240 (38.75%), Query Frame = 0

Query: 28  STSASSAVNSLLLRSLKEHYLEISRMTPPPKV-SPPSSFSI-IKGALDGKGPVLTRTYGK 87
           ST   ++    LLR ++E      +     +V   PS F   ++    GK   LTR Y  
Sbjct: 51  STKKRASPTDPLLRIIEEEIGYAEKADDYHRVEETPSGFPFEMEDKPGGKIVTLTREYEG 110

Query: 88  EEVNISVMRLANIIPGGGGDDDEINQLFLYVTVSKPEQRDNLQFLCGLYPDALGIHSVSM 147
           E V + V  + N++ G   DD++  +          E  D                   +
Sbjct: 111 ETVKVEV-HMTNLVTGDKEDDEDDEE-----EAENEEDED---------------EDKPL 170

Query: 148 RPKAEPSGFFVIPSGYTGPVFDIFASFYEPKWDYDVFCLGCSFADNLCPITVDGKTCHKK 207
           +PK       V  S  TGP  +   + +  +    +  +  +F D+            K 
Sbjct: 171 KPKQSNVPLLVTLSKKTGPSLEFRCTAFPDR--IAIKDMWVTFPDD----------PSKD 230

Query: 208 TYTYFSLDDRDLDEKMRDVFHNYLEERGISESLFPFLQAWLYVKEHRNLMRWFRTVGSFI 266
              Y     R LDEK+R  FH Y+E RGI  S+  FL  ++  K+ R  + W +++ +F+
Sbjct: 231 ELAYEGPSFRVLDEKLRKAFHRYIEIRGIKPSMINFLHEYMINKDSREHLLWLKSLKNFV 257

BLAST of ClCG08G008440.2 vs. TAIR 10
Match: AT3G55605.1 (Mitochondrial glycoprotein family protein )

HSP 1 Score: 50.8 bits (120), Expect = 2.0e-06
Identity = 26/79 (32.91%), Postives = 42/79 (53.16%), Query Frame = 0

Query: 195 ITVDGKTCHK------KTYTYFSLDDRDLDEKMRDVFHNYLEERGISESLFPFLQAWLYV 254
           I +DG + ++      +  TY   D ++LDE MR  FH +LE RGI  S   FL  ++  
Sbjct: 180 IVIDGLSVNRPDDSSEEQLTYDGPDFQELDENMRKSFHKFLETRGIKASATDFLYEYMMK 239

Query: 255 KEHRNLMRWFRTVGSFINE 268
           K+ R  + W + + +F+ E
Sbjct: 240 KDSREYLLWLKKLKTFVQE 258

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022938797.11.2e-10171.38uncharacterized protein At2g39795, mitochondrial [Cucurbita moschata] >KAG657883... [more]
XP_038884404.11.5e-10172.83uncharacterized protein At2g39795, mitochondrial [Benincasa hispida][more]
XP_023549717.11.4e-9970.65uncharacterized protein At2g39795, mitochondrial [Cucurbita pepo subsp. pepo][more]
XP_022992760.11.9e-9970.29uncharacterized protein At2g39795, mitochondrial [Cucurbita maxima][more]
XP_022134253.15.1e-9769.06uncharacterized protein At2g39795, mitochondrial [Momordica charantia][more]
Match NameE-valueIdentityDescription
O946751.1e-0435.48Mitochondrial acidic protein mam33 OS=Schizosaccharomyces pombe (strain 972 / AT... [more]
Match NameE-valueIdentityDescription
A0A6J1FF365.7e-10271.38uncharacterized protein At2g39795, mitochondrial OS=Cucurbita moschata OX=3662 G... [more]
A0A6J1JWM09.1e-10070.29uncharacterized protein At2g39795, mitochondrial OS=Cucurbita maxima OX=3661 GN=... [more]
A0A6J1C1F62.5e-9769.06uncharacterized protein At2g39795, mitochondrial OS=Momordica charantia OX=3673 ... [more]
A0A0A0KCG31.7e-9367.27Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G046350 PE=4 SV=1[more]
A0A1S3C3N74.1e-9265.83uncharacterized protein At2g39795, mitochondrial OS=Cucumis melo OX=3656 GN=LOC1... [more]
Match NameE-valueIdentityDescription
AT4G32605.13.2e-6550.73Mitochondrial glycoprotein family protein [more]
AT1G80720.17.3e-0922.55Mitochondrial glycoprotein family protein [more]
AT1G15870.11.4e-0720.62Mitochondrial glycoprotein family protein [more]
AT5G05990.15.2e-0723.33Mitochondrial glycoprotein family protein [more]
AT3G55605.12.0e-0632.91Mitochondrial glycoprotein family protein [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003428Mitochondrial glycoproteinPFAMPF02330MAM33coord: 215..265
e-value: 1.7E-11
score: 44.5
IPR036561Mitochondrial glycoprotein superfamilyGENE3D3.10.280.10Mitochondrial glycoproteincoord: 37..265
e-value: 2.1E-24
score: 88.4
IPR036561Mitochondrial glycoprotein superfamilySUPERFAMILY54529Mitochondrial glycoprotein MAM33-likecoord: 41..266
NoneNo IPR availablePANTHERPTHR31365EXPRESSED PROTEINcoord: 1..270
NoneNo IPR availablePANTHERPTHR31365:SF2MITOCHONDRIAL GLYCOPROTEIN FAMILY PROTEIN-LIKEcoord: 1..270

Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
ClCG08G008440ClCG08G008440gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
ClCG08G008440.2-exonClCG08G008440.2-exon-CG_Chr08:20932005..20932329exon
ClCG08G008440.2-exonClCG08G008440.2-exon-CG_Chr08:20933200..20933528exon
ClCG08G008440.2-exonClCG08G008440.2-exon-CG_Chr08:20933650..20933851exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
ClCG08G008440.2-cdsClCG08G008440.2-cds-CG_Chr08:20932005..20932329CDS
ClCG08G008440.2-cdsClCG08G008440.2-cds-CG_Chr08:20933200..20933528CDS
ClCG08G008440.2-cdsClCG08G008440.2-cds-CG_Chr08:20933650..20933820CDS


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
ClCG08G008440.2-five_prime_utrClCG08G008440.2-five_prime_utr-CG_Chr08:20933821..20933851five_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
ClCG08G008440.2ClCG08G008440.2-proteinpolypeptide


GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0005759 mitochondrial matrix