ClCG04G000510.1 (mRNA) Watermelon (Charleston Gray) v2.5
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGACAAATCTTCCTGTTTCTCGCGTTGCCTTCATTATGCTTATCTTTGCAGGTTCTCCTCTACTTATAACTTATATATTTTTATTAAGTGTTATCTGAGAATAAGTGCATCGGTATGAGACATATTTTGTGAATGGAGACAAAGGAAAAAGAAAACGACATGAATACGTAGTAACAAGAGAATATTGCTCATTCGTTTGCATGCTCTATTTTATCCATTCGATGAGTTAAAGAAAAAAAATGTTTACTAATTATTTGATATGTCATATCTATCCACGTATGATCTCGATGGTTTGATGTGTTGGTTCCTTGTATTTTTCAGTTTATTTGCATTCGATATTAAAATGACTGAGTGTTAATGATTTTCTTGTGCAACAAGGTTTTCTTGTAACACCAACTCCCGTGGGTTACTATATTTTATTTTAAGAAAACATTCAACGTAGAAAACTTTAAGATTCAAGAATATCACTGATGCAAACATAAATGGTTATCGTAATGAAATCTACCATATGCATAATGGTTAATTATTTTACTCTTGTTGTTGTGTAGTTGCAATGATTTTGGTACCTCAAGGAGCCTCAGCAGCTCAAAAATGTCAAGATAGATTGTACGTTGGCGGGTGCACGCCACTTGATTGTGGACAAAAGTGCAGGCAGCTACACCATAATGCAACGCATCAATGCATACCTACTGATGAAACGTTTACAAACTATGCTTGTTATTGTTTCTTTACTTGTCCTCAAACTTGA ATGACAAATCTTCCTGTTTCTCGCGTTGCCTTCATTATGCTTATCTTTGCAGTGTTATCTGAGAATAAGTGCATCGTTGCAATGATTTTGGTACCTCAAGGAGCCTCAGCAGCTCAAAAATGTCAAGATAGATTGTACGTTGGCGGGTGCACGCCACTTGATTGTGGACAAAAGTGCAGGCAGCTACACCATAATGCAACGCATCAATGCATACCTACTGATGAAACGTTTACAAACTATGCTTGTTATTGTTTCTTTACTTGTCCTCAAACTTGA ATGACAAATCTTCCTGTTTCTCGCGTTGCCTTCATTATGCTTATCTTTGCAGTGTTATCTGAGAATAAGTGCATCGTTGCAATGATTTTGGTACCTCAAGGAGCCTCAGCAGCTCAAAAATGTCAAGATAGATTGTACGTTGGCGGGTGCACGCCACTTGATTGTGGACAAAAGTGCAGGCAGCTACACCATAATGCAACGCATCAATGCATACCTACTGATGAAACGTTTACAAACTATGCTTGTTATTGTTTCTTTACTTGTCCTCAAACTTGA MTNLPVSRVAFIMLIFAVLSENKCIVAMILVPQGASAAQKCQDRLYVGGCTPLDCGQKCRQLHHNATHQCIPTDETFTNYACYCFFTCPQT Homology
BLAST of ClCG04G000510.1 vs. NCBI nr
Match: KAA0042348.1 (S locus-related glycoprotein 1 binding pollen coat [Cucumis melo var. makuwa] >TYK15471.1 S locus-related glycoprotein 1 binding pollen coat [Cucumis melo var. makuwa]) HSP 1 Score: 97.4 bits (241), Expect = 6.6e-17 Identity = 51/90 (56.67%), Postives = 59/90 (65.56%), Query Frame = 0
BLAST of ClCG04G000510.1 vs. NCBI nr
Match: KGN64987.1 (hypothetical protein Csa_022748 [Cucumis sativus]) HSP 1 Score: 89.7 bits (221), Expect = 1.4e-14 Identity = 50/88 (56.82%), Postives = 57/88 (64.77%), Query Frame = 0
BLAST of ClCG04G000510.1 vs. NCBI nr
Match: KAE8649772.1 (hypothetical protein Csa_012405, partial [Cucumis sativus]) HSP 1 Score: 82.8 bits (203), Expect = 1.7e-12 Identity = 36/62 (58.06%), Postives = 44/62 (70.97%), Query Frame = 0
BLAST of ClCG04G000510.1 vs. NCBI nr
Match: CAB4286917.1 (unnamed protein product [Prunus armeniaca]) HSP 1 Score: 64.7 bits (156), Expect = 4.7e-07 Identity = 29/58 (50.00%), Postives = 39/58 (67.24%), Query Frame = 0
BLAST of ClCG04G000510.1 vs. NCBI nr
Match: BBH07492.1 (hypothetical protein Prudu_019451 [Prunus dulcis]) HSP 1 Score: 62.4 bits (150), Expect = 2.3e-06 Identity = 28/58 (48.28%), Postives = 39/58 (67.24%), Query Frame = 0
BLAST of ClCG04G000510.1 vs. ExPASy TrEMBL
Match: A0A0A0KYP7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G507400 PE=3 SV=1) HSP 1 Score: 110.2 bits (274), Expect = 4.7e-21 Identity = 56/90 (62.22%), Postives = 63/90 (70.00%), Query Frame = 0
BLAST of ClCG04G000510.1 vs. ExPASy TrEMBL
Match: A0A5A7THQ7 (S locus-related glycoprotein 1 binding pollen coat OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold477G00450 PE=3 SV=1) HSP 1 Score: 97.4 bits (241), Expect = 3.2e-17 Identity = 51/90 (56.67%), Postives = 59/90 (65.56%), Query Frame = 0
BLAST of ClCG04G000510.1 vs. ExPASy TrEMBL
Match: A0A0A0LVZ5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G172580 PE=3 SV=1) HSP 1 Score: 89.7 bits (221), Expect = 6.6e-15 Identity = 50/88 (56.82%), Postives = 57/88 (64.77%), Query Frame = 0
BLAST of ClCG04G000510.1 vs. ExPASy TrEMBL
Match: A0A0A0L2R3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G576870 PE=3 SV=1) HSP 1 Score: 85.1 bits (209), Expect = 1.6e-13 Identity = 43/82 (52.44%), Postives = 52/82 (63.41%), Query Frame = 0
BLAST of ClCG04G000510.1 vs. ExPASy TrEMBL
Match: A0A6J5VH03 (Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS44688 PE=3 SV=1) HSP 1 Score: 64.7 bits (156), Expect = 2.3e-07 Identity = 29/58 (50.00%), Postives = 39/58 (67.24%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
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