ClCG03G000930.1 (mRNA) Watermelon (Charleston Gray) v2.5

Overview
NameClCG03G000930.1
TypemRNA
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionUnknown protein
LocationCG_Chr03: 937986 .. 939748 (+)
Sequence length627
RNA-Seq ExpressionClCG03G000930.1
SyntenyClCG03G000930.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTGGCGGTGTTAGTAGAGGTGTGGTTATGGAGGTTGCAAAGTTTAGGTCAGTGAGCAAGCTCAGTTATATTTCTATTTAGTTCTTTTTCTTTTGATGAAACTGAACATGCTCGGCTAGTTTGACTCGAGATACGAGGTCAGATCTCTCTACCTTGGGACATGGGGACCCCTAGGGTTCCTTGATTTTGGGCCCGTCCCATGGACATGGGGCCTTAACCCCCAACAATGGCCCTTCGGTGAGCTGGTATGAGGTTGAGGGTCGGTCTTGAGGGAGATCTCGTGTTCACGGGTGGTGTCACTTGATTGGTCGTGTTCCTGACCATTATGCTTTCCAAGTAGTTACAATTGGTTTTTGTTAGTCGCGCCCCTTGAGAGTGTTGGGTTGTCTCTGCACGTTTGGGGTAAGATGAATTCTCATCCAATGACGACAGATCATGGATTCCTATAAATAGAACTTTCTGATCATGATTAATGGATATACTTCATTTTTTACTTATTTTAGCAGACCTGGCCTGTTCAACTTGTGTTAAGTCATTTATTTCTTCTTATATTATGGGGGTGTGGGATGTCTAGGTGACTTGCAACATCTCTTGATGTGGGGGGAGGTGGACCTGTTGATCTGTCTTCTCGGCTCCTTGCCACCTACTTGGAAAACTTGAAGTCAAAGTATTATCTCCCCCTGTTGTAGTTCTGCATCTCTTCGAGCTGGGCGATATGATCTAGGATATATCCTTGGGCAAGATTGGCATATATCGATAGATGTTCGAAGTTGGGGTCGCTTCAACTCAATTACCACCCAACGAATGGGGCGTGTGTTGATGTTGCCATTTGTTGTTGCTTGCAATTGACCAATCAAATAAATTTATAATTATCGGTCAATACACCTATACTATTGAATAGTACAAGTGACAAGATTGGGTCGATCCACAAGGAAATGCAAATTTAGTTTCAAACGAGTTCAATTTAGCTAAAGTGGTAATTAGGGGGGTATTTGGTATGGTTTGAGAATTTAAAGTGAGGAAAAGTAAAATGCGGAAAAGTAACGAGAAAGATAAAACGACCTAGCTTGAAAATTAGGTTCCACCTAATTGCTTGATTGATCATAGGATTTTTTATAAATAATTTTTTATGAATAAATGTGTTTAATTTGCCCCACTTTCCTAGAAAGCCAAGACAAGCGTCCGAGTACATTAAGTAATTATTTAATTAAACTAGATGCTCGACTGATTAGGTTTGATAGCGACCATAAGAATCAAATACCTGCATTAAGTAAAGGGAATGTTACAAAAGAGTCTTCCTAAACAACTTAAAATTCACACACAAGCATGCTTTGGATTTTGCTACTTAGGATTTACACATAATTATATAGCATATTATGTGATCAATCCAGTCATACATGAAAAGAGAAAGAGAGAAGGAGAGAATTGGATGGGAGCGGCTGAATGTGAGATGATAACCTAGAATTCGGAAAAGAGGATATTTATAAAAAACCGACAGGTGTGGCACAGTTGGGGTAGCACTGCAAAGCTCTAACCCCTTGATGTAGCGTCGTGTTGTAGCACCAACGAGTGTTACAACGCTTCAATCGCCTGGTGTTGGCCCTCGCTTCTTTCCTAGGCATTGCGCACAATGTTGCAATGCTGCGTGGTGCATTTTCATCCTTCTCTCCGTTTGACTTAGTTGCTTCTTTAGGCTGTGAATTGATCTATTTAACTCCACTTATTCCCTATCTCTCAATTCTACCTTTGGGTGCTAGATAG

mRNA sequence

ATGTTGGCGGTGTTAGTAGAGGTGTGGTTATGGAGGTTGCAAAGTTTAGGTCAATCTCTCTACCTTGGGACATGGGGACCCCTAGGGTTCCTTGATTTTGGGCCCGTCCCATGGACATGGGGCCTTAACCCCCAACAATGGCCCTTCGGGAGATCTCGTGTTCACGGGTGGTGTCACTTGATTGGTCGTGTTCCTGACCATTATGCTTTCCAAGTAGTTACAATTGGTGGACCTGTTGATCTGTCTTCTCGGCTCCTTGCCACCTACTTGGAAAACTTGAATTCTGCATCTCTTCGAGCTGGGCGATATGATCTAGGATATATCCTTGGGCAAGATTGGCATATATCGATAGATGTTCGAAGTTGGGGTCGCTTCAACTCAATTACCACCCAACGAATGGGGCGTGTGTTGATGTTGCCATTTGTTCACCAACGAGTGTTACAACGCTTCAATCGCCTGGTGTTGGCCCTCGCTTCTTTCCTAGGCATTGCGCACAATGTTGCAATGCTGCGTGGTGCATTTTCATCCTTCTCTCCGTTTGACTTAGTTGCTTCTTTAGGCTGTGAATTGATCTATTTAACTCCACTTATTCCCTATCTCTCAATTCTACCTTTGGGTGCTAGATAG

Coding sequence (CDS)

ATGTTGGCGGTGTTAGTAGAGGTGTGGTTATGGAGGTTGCAAAGTTTAGGTCAATCTCTCTACCTTGGGACATGGGGACCCCTAGGGTTCCTTGATTTTGGGCCCGTCCCATGGACATGGGGCCTTAACCCCCAACAATGGCCCTTCGGGAGATCTCGTGTTCACGGGTGGTGTCACTTGATTGGTCGTGTTCCTGACCATTATGCTTTCCAAGTAGTTACAATTGGTGGACCTGTTGATCTGTCTTCTCGGCTCCTTGCCACCTACTTGGAAAACTTGAATTCTGCATCTCTTCGAGCTGGGCGATATGATCTAGGATATATCCTTGGGCAAGATTGGCATATATCGATAGATGTTCGAAGTTGGGGTCGCTTCAACTCAATTACCACCCAACGAATGGGGCGTGTGTTGATGTTGCCATTTGTTCACCAACGAGTGTTACAACGCTTCAATCGCCTGGTGTTGGCCCTCGCTTCTTTCCTAGGCATTGCGCACAATGTTGCAATGCTGCGTGGTGCATTTTCATCCTTCTCTCCGTTTGACTTAGTTGCTTCTTTAGGCTGTGAATTGATCTATTTAACTCCACTTATTCCCTATCTCTCAATTCTACCTTTGGGTGCTAGATAG

Protein sequence

MLAVLVEVWLWRLQSLGQSLYLGTWGPLGFLDFGPVPWTWGLNPQQWPFGRSRVHGWCHLIGRVPDHYAFQVVTIGGPVDLSSRLLATYLENLNSASLRAGRYDLGYILGQDWHISIDVRSWGRFNSITTQRMGRVLMLPFVHQRVLQRFNRLVLALASFLGIAHNVAMLRGAFSSFSPFDLVASLGCELIYLTPLIPYLSILPLGAR
Homology
The following BLAST results are available for this feature:
BLAST of ClCG03G000930.1 vs.
Match NameE-valueIdentityDescription
BLAST of ClCG03G000930.1 vs.
Match NameE-valueIdentityDescription
BLAST of ClCG03G000930.1 vs.
Match NameE-valueIdentityDescription
BLAST of ClCG03G000930.1 vs.
Match NameE-valueIdentityDescription
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
ClCG03G000930ClCG03G000930gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
ClCG03G000930.1-exonClCG03G000930.1-exon-CG_Chr03:937986..938038exon
ClCG03G000930.1-exonClCG03G000930.1-exon-CG_Chr03:938130..938224exon
ClCG03G000930.1-exonClCG03G000930.1-exon-CG_Chr03:938259..938336exon
ClCG03G000930.1-exonClCG03G000930.1-exon-CG_Chr03:938594..938648exon
ClCG03G000930.1-exonClCG03G000930.1-exon-CG_Chr03:938677..938821exon
ClCG03G000930.1-exonClCG03G000930.1-exon-CG_Chr03:939548..939748exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
ClCG03G000930.1-cdsClCG03G000930.1-cds-CG_Chr03:937986..938038CDS
ClCG03G000930.1-cdsClCG03G000930.1-cds-CG_Chr03:938130..938224CDS
ClCG03G000930.1-cdsClCG03G000930.1-cds-CG_Chr03:938259..938336CDS
ClCG03G000930.1-cdsClCG03G000930.1-cds-CG_Chr03:938594..938648CDS
ClCG03G000930.1-cdsClCG03G000930.1-cds-CG_Chr03:938677..938821CDS
ClCG03G000930.1-cdsClCG03G000930.1-cds-CG_Chr03:939548..939748CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
ClCG03G000930.1ClCG03G000930.1-proteinpolypeptide