ClCG02G012110.1 (mRNA) Watermelon (Charleston Gray) v2.5
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAACCCTCTTCTTCTCCCACTTTCCTCTCTAATTCCAACCCTCCTCTTAGCTCCTCCGAATCAGAATTCTCCGACATCGAAATGACCCCTCTTCAATCCTACACCAGCCTCAAAGACCTCCTCCCGGACTCCCCCTCGCCGCCCCCCTCCACCGTCGCCGCCCCCCTCCACTGCCCCGCCTGGGACGAACTCCCCATCAAAAACCCACTTGTCAAACACGCCGCCTTGGCCTACCTTCAGCCCATGCTCACGCCGCCCGTCGCCGGCGATCGTACCTTCATGCGCAGGCTCAAGAAGCACGGTTTCGGATGCATCGAGTGGCTCGCTGCTGTCGTCGCTGGAGTCCGCCGGTGGTAG ATGGAACCCTCTTCTTCTCCCACTTTCCTCTCTAATTCCAACCCTCCTCTTAGCTCCTCCGAATCAGAATTCTCCGACATCGAAATGACCCCTCTTCAATCCTACACCAGCCTCAAAGACCTCCTCCCGGACTCCCCCTCGCCGCCCCCCTCCACCGTCGCCGCCCCCCTCCACTGCCCCGCCTGGGACGAACTCCCCATCAAAAACCCACTTGTCAAACACGCCGCCTTGGCCTACCTTCAGCCCATGCTCACGCCGCCCGTCGCCGGCGATCGTACCTTCATGCGCAGGCTCAAGAAGCACGGTTTCGGATGCATCGAGTGGCTCGCTGCTGTCGTCGCTGGAGTCCGCCGGTGGTAG ATGGAACCCTCTTCTTCTCCCACTTTCCTCTCTAATTCCAACCCTCCTCTTAGCTCCTCCGAATCAGAATTCTCCGACATCGAAATGACCCCTCTTCAATCCTACACCAGCCTCAAAGACCTCCTCCCGGACTCCCCCTCGCCGCCCCCCTCCACCGTCGCCGCCCCCCTCCACTGCCCCGCCTGGGACGAACTCCCCATCAAAAACCCACTTGTCAAACACGCCGCCTTGGCCTACCTTCAGCCCATGCTCACGCCGCCCGTCGCCGGCGATCGTACCTTCATGCGCAGGCTCAAGAAGCACGGTTTCGGATGCATCGAGTGGCTCGCTGCTGTCGTCGCTGGAGTCCGCCGGTGGTAG MEPSSSPTFLSNSNPPLSSSESEFSDIEMTPLQSYTSLKDLLPDSPSPPPSTVAAPLHCPAWDELPIKNPLVKHAALAYLQPMLTPPVAGDRTFMRRLKKHGFGCIEWLAAVVAGVRRW Homology
BLAST of ClCG02G012110.1 vs. NCBI nr
Match: KAG6571006.1 (hypothetical protein SDJN03_29921, partial [Cucurbita argyrosperma subsp. sororia] >KAG7010836.1 hypothetical protein SDJN02_27632, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 190.3 bits (482), Expect = 9.7e-45 Identity = 100/119 (84.03%), Postives = 104/119 (87.39%), Query Frame = 0
BLAST of ClCG02G012110.1 vs. NCBI nr
Match: XP_021810412.1 (uncharacterized protein LOC110753763 [Prunus avium]) HSP 1 Score: 105.9 bits (263), Expect = 2.4e-19 Identity = 65/124 (52.42%), Postives = 78/124 (62.90%), Query Frame = 0
BLAST of ClCG02G012110.1 vs. NCBI nr
Match: PQQ14465.1 (uncharacterized protein Pyn_20094 [Prunus yedoensis var. nudiflora]) HSP 1 Score: 105.9 bits (263), Expect = 2.4e-19 Identity = 65/124 (52.42%), Postives = 78/124 (62.90%), Query Frame = 0
BLAST of ClCG02G012110.1 vs. NCBI nr
Match: PQQ02572.1 (uncharacterized protein Pyn_10650 [Prunus yedoensis var. nudiflora]) HSP 1 Score: 105.5 bits (262), Expect = 3.2e-19 Identity = 65/124 (52.42%), Postives = 78/124 (62.90%), Query Frame = 0
BLAST of ClCG02G012110.1 vs. NCBI nr
Match: XP_007199228.2 (uncharacterized protein LOC18768692 [Prunus persica] >ONH92342.1 hypothetical protein PRUPE_8G169400 [Prunus persica]) HSP 1 Score: 102.8 bits (255), Expect = 2.0e-18 Identity = 64/124 (51.61%), Postives = 77/124 (62.10%), Query Frame = 0
BLAST of ClCG02G012110.1 vs. ExPASy TrEMBL
Match: A0A0A0LPR9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G271440 PE=4 SV=1) HSP 1 Score: 161.8 bits (408), Expect = 1.8e-36 Identity = 88/117 (75.21%), Postives = 93/117 (79.49%), Query Frame = 0
BLAST of ClCG02G012110.1 vs. ExPASy TrEMBL
Match: A0A314Z2H1 (Uncharacterized protein OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn_20094 PE=4 SV=1) HSP 1 Score: 105.9 bits (263), Expect = 1.2e-19 Identity = 65/124 (52.42%), Postives = 78/124 (62.90%), Query Frame = 0
BLAST of ClCG02G012110.1 vs. ExPASy TrEMBL
Match: A0A6P5S7A4 (uncharacterized protein LOC110753763 OS=Prunus avium OX=42229 GN=LOC110753763 PE=4 SV=1) HSP 1 Score: 105.9 bits (263), Expect = 1.2e-19 Identity = 65/124 (52.42%), Postives = 78/124 (62.90%), Query Frame = 0
BLAST of ClCG02G012110.1 vs. ExPASy TrEMBL
Match: A0A314Y647 (Uncharacterized protein OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn_10650 PE=4 SV=1) HSP 1 Score: 105.5 bits (262), Expect = 1.5e-19 Identity = 65/124 (52.42%), Postives = 78/124 (62.90%), Query Frame = 0
BLAST of ClCG02G012110.1 vs. ExPASy TrEMBL
Match: A0A251MZ17 (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_8G169400 PE=4 SV=1) HSP 1 Score: 102.8 bits (255), Expect = 9.9e-19 Identity = 64/124 (51.61%), Postives = 77/124 (62.10%), Query Frame = 0
BLAST of ClCG02G012110.1 vs. TAIR 10
Match: AT3G52520.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G06280.3); Has 24 Blast hits to 24 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 24; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 45.1 bits (105), Expect = 4.7e-05 Identity = 29/70 (41.43%), Postives = 41/70 (58.57%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
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