ClCG02G009870.1 (mRNA) Watermelon (Charleston Gray) v2.5

Overview
NameClCG02G009870.1
TypemRNA
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionUnknown protein
LocationCG_Chr02: 15573181 .. 15580307 (+)
Sequence length555
RNA-Seq ExpressionClCG02G009870.1
SyntenyClCG02G009870.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGAGAGGGTCCAAACTTGGAATATCGTCAAAGAGGATATGGTTGAGGTGTCCCAAGATTTTTTTAGAATGGAATCCTTAATTCTTGTGTAATGAGACCTACCTTTATATGATTCCACCAAAAAAAAAGGGGGAGGAGGGATCTTCAACGTTGTTGACGATCAGCCAAGTAACCTCACTACAAGTCTGTACAAAATTGTTGCAAGGTCCTAGCTAAAAGACTTTGCAAAATTGTTGCCCAGGTCCTAACTAAAAGACTAAAGAGTTGTCCTCCACACCATAGCTCAAAATTAATCAGCTGATTCTTACGGAATACTCCCAACAAAAATGGTCATAATCTTATTTGGATATACCTTTAGTATTAGTCAGAGCAGACTTTTGGGCTCCAATTGAAGACAGAATTTCATCCAAGCTAGAAAAGTGAAATAATTTTACCAGCTCTAGGCAAGTTACCTCTTCTGAGGACTCCATTTCTGACTCATCACTGGACATATTTGTTACTTGAGGCCTTGGAGTGGCAAGAGGAGGAAGAGGTGGCAGCGTTAATGATGGTGATGGTGGTGCAGGAATGCAAGGTGGGAGAGGTGGAGTGGGTAGAGGCAATCGGAATGGAGCTGGAATGTTCATCTTGTTCATTAAATGCAGCACCTACAATTAAAAAACTAAGTTGTAAGAATTTACTTCAAATATGCTCCAGCAATTAAACGTATAAATTATCATTTCATTTGTAGTAACCTGAGTATAGAAGCGAGGGACAGCTATGAGGGCATTAACAATGTTGGTCAGGATATTACCATCTGGTGGAGGATAAGCATACCTAAAAAAAGTTTTTACCAAATCTTATTGAATGCACAACCAAATACAATTGTCTCCACAAAAACTTAGTAAAGAACAAACAATTTTGATCAGATCAATTACAATGGATAATGAAGAACCTAAAGTAAAATAGTACTTTTAAAGGAAACAAATCTAATCAAGACATGAAAAACAGGTGATACAGGACAAATGGTATGCCAAGAATATTTAGACATTTTCCAATTAGGGATTGTATGTATTTTCTCTTTGGACTTTTTTTTATAATGATACACCAAACTTTCTTTGAGAAAAAATGAGCCCAACCAAAGAGGACCTAGTAGCCAATATTGTATCCAAGATGTTAACTCTTCTATGCATAACTTGCCACACAAAAAAACTGAACCTTCTTAGATGTTTACCTTCCACATAGAGGAAAAGTGGAGACATTTGACTGAAAGGAGCCAGCCAAACAACGACAGAAGAAGCTAACAGGAAAAGGTTTGGAAGGGCAAGGAGTCCAAAGGCAGATATACCCCAATCACTGAAGGGGGAGCCCACAAGTAAAGATAACAAAGCCATGACATCTTTACTCATATATTTATGATTCTTTTGAAGCATCCTTTCAAAAAAGGACCAAAAGATCCTCTAGCTCAGTCATCTTCAAGCTTTATATTGGAATCTCAAGTTGGAAAACAATGCCTGTGTCTTCACAGATAAGCCATCCACTGCCCAACCTTTTGAGGAAGCAGACCAGCACTGAAGAATCCTGTTAGACCTCCTATAATATTAACTTACAGCAGAAAAAGAAATAAAGGGAAGGGTATGGTGTGTGGGAGTGTGGCTTCTTCTAGCCAAACTTAATTAGTAGTTAATTTAATTAGTAATTATTTATGTCTTTGTTTTATTGTGGGGGAGGGAGGTAGTTAAGGGAGGAATAGGTGAGAGGGGGAAGACAGTTTTTATGTTTTCGGGAATTGCTTATACAACAGTTGGGGAAGGGGACTGAGGGCAGTTTCCTTGTGTAGTGTAGGGCTGTAATTTTGATGAAATTCAATAAGAAAGTTTGGTTGGAATCTTATCAAATTGGTATCAGAGCATCACCCTGGGGAAGCACGATACAATGGCGCAGCAGAAATTTGATGAGCGGATGGAAGCAATGGATCAAGAGGTTTCGGAACTTCACGCTGAAATTCAGAAACTTCCCGGTATTGAAGAATCTCTACTTTCGCTGTCCGTATTGAAAAGTTGGGAGTTCAAGCTGAAAAGCAGCAAATCATGTTGACTACGATACCCGTAGACTTAGCCCGTGGTCAGAAATTGCCGGCAGGGGATGAGTCGGGCAGTCGTACCACAAGTATGTTGCCGCAACCGTCGATAACTGATCAAACAAACGCGGAATCTTCTAACGCGGCCATGGATCGGAGTAAATTCAAGAAGGTGGAAATGCCCGTGTTCAGCGGAATCGATCCGGATGGGTGGCTATTCAGAGCAGATCGATATTTTCACATACACCGGTTGTCGGAGACGGAGAAGATGACGGTGGCAGTCATTAGTTTTGATGGTGTTGCACTCAACTGGTATCGGGCTCAGGAAGAACACGACTCTTTTACGGATTGGGCAAATTTGAAGCATCGTTTGTTGATGCGTTTTCGTTCTGAGAGGGAGGGGTCGTTGTGTGGTCGGTTTTTAGCCATCAAACAAGAGACTACCGTGGAGGCTTATCGGAATTTGTTCGATAAATTGGTTGCACCATTGCCACATTTGTCAAATGAGGTTCTGGAAGAGACGTTCATGAATGGCCTATTGCCGTGGATCAAAGCTGAGGTTGAGTGTTGGGAACCAGTCGGTCTGGCACAGATGATGAAGTTGGCTCAGAAGGTTGAAAATAGGGAATTGCGTCGTTTTGATGTTGGTCTGGGCACAAAATCAGTTGGACGACCGCAGCTGTTTGATCAGAAGGATTCGTCCTTGCCTGCTGGGCTGAAGGAAGGAGGGAAGACGACGGAAACGCCTACAATGAGGACGATAACATTAAGGGGATTGTCGATTGTGGGTAACAAACGGGAAGGACTAGCGAGACGATTGACAGATGCTGAATTTCAGGCCAAACATGATAAAGGGTTGTGTTTTCGTTGTGATGAACGGTATTCAACAGGTCATCGTTGTAAAAATCACGATCAACGGGAACTTCGGGTGCTGGTTGTTGCGGATGGGGTTGACGATTTGGAAATTGTTGAAGATGAGGATTATCAGGAGGTTCAGACAGAGTTACAGATGATTAAAACAGATGACACTATGACCGCCATAGCGAAATTGTCAATTAATTCTGTAGTAGGATTATCCAATCTGGGAACTATGAAGATGAGAGGTCACATTGAAGGAGAGTCAGTTATAGTGCTAATTGATTGTGGAGCGACACATAATTTTATTGCTGAAAGATTAGTTTCGTCTCTACGCCTACCAATTGTGGAAACCTCCAATTATGGGGTAATTTTGGGATCGGGGTCCGCAATTAAAGGAAAAGGTATCTGTAATGTGATGAAATTAGTGATTGGGGATTTTATTGTCTGTGGTAATTTCTTACCTTTAGAATTGGGAGGAGTGGATGTAATACTAGGCATGCAGTGGTTACATACTTTAGGAATGACAAAAGTTAATTGGCAGAATTTGACAATGTCATTTAACCAGGATGGGAAGACCGTGGTATTAAAGGGAGATTCTAGTCTCACAAAGTCGCGGGTGAGTTTAAAAAGTATGATACGATCATGGACAGAGCGAATCAGGGATTTCTCATCGAATGTCGGTTCATGGAGGGCGGAGTTTCGTTGGCTAAATGGTATGGTATCGATGAAGTGTATACTATTTCTGATTCAATTCCAGCAGTGCTAGATACCTTTGTTGATGTGTTTGAGTGGCCGGAAACATTACCACCAAGGAGGAGTATTGAACATCACATCCATCTGAAGCAGGGCACGGATCCAGTTAATGTGAGACCTTATAGATACGGATCCAGTTAATGTGAGACCTTATAGATACGCCTATCATCAAAAGGAGGAGATGGAGAAGTTGGTGGATGAAATGTTAGCATCAGGAGTTATTCGTCCTAGCACAAGTCCGTATTCGAGTCCTGTTTTGTTGGTTAAGAAGAAGGACGGAGGTTGGAGATTTTGTGTTGATTATCGAGCTTTGAATAATGTTACTATACCTGATAAGTTTTGCATTCCGGTAATTGAAGAATTGTTTGATGAATTGAATGGTGCCACATTATTTTCCAAGATCGATTTGAAGTCGGGTTATCATCAAATTAGAATGTACCCGAGAGATGTGGAGAAAACAGCTTTTCGGACTCATGAGGGCCATTATGAGTTTTTGGTAATGCCATTTGGATTGACTAATGCTCCATCAACATTTCAAGCACTTATGAATACCATTTTTAAACCATATTTGAGTAGGTTCGTACTAGTTTTCTTTGATGTCATTTCAGTCTATAGTCGAACAGTAGAGGATCATGTTAAGCATTTGGAGAAAGTCTTTCTGATATTGAGGGACAATGAATTGTATGCTAATAAGACTAAATGTCAGTTTGCTAAGGAAAGGGTGGAATATTTGGGGCATTAGATATCAGGTAAAGGTGTAGAGGCAGATCCTGAAAAAGTTCGAGCAATGTTAGAATGGCCTGTACCTACAAACGTCAGGGAGGTGCATGGTTTTTTGGGATTGACTGGGTATTATAGGCGTTTTGTTCATCATTACGGTAGCCTCGCAGCTCCTTTGAGTCAGTTGTTGAAAGGGGGAGCCTTTGAATGGAATGCAGATGCGCAAGTTGCTTTTGAACGTCTGAAAAATGCTATGATGACATTGCCCGTTTTGACATTACCTGATTTTGATTTACCTTTTGAGGTTGAAACGGATGCTTCTGGTTTTGGATTGGGGGCAGTTTTGACACAATTGAGGAGGCCCATAGCTTATTATAGTCACACTTTGTCCCTACGAGATAGGGGGAAACCAGTATATGAGAGAGAATTGATGGCCGTAGTGATGGCGGTGCAACGTTAGAGACCTTATTTGTTGGGTAGGAAGTTTATTGTGAAGACTAATCAGCAGGTTTTGAAGTTTTTGTTGGAGCAGAGAGTGATACAACCACAACATCAGAAATGGATTGCAAAGTTGTTGGGTTATGGTTTCCAGGTAGTTTACGACCAGGGTTGGAAAACAAGGCTACTGATGCTTTATCTCATATTCCACCTACTGTCCATTTGGCTTCTTTATCAGCCCCTACTATCATCGATGTAGAGATTATTAAAACCGAAGTTTCCAATGACCCGAAGTTGCAGGAAATTATTGCAAAGTTGGAGCAGGATGTTGAGAGTGTTCTTGGTTTTGTGTGGCAACAGGGAACTTTGAAATACAAGGGACGCCTGGTATTATCTCGATCTTCTACCCTTATTCCTACGGTGTTACACATTTATCATGATTCTGTATTTGGGGGGCATTCGTGGTATCTCCGTACTTATAAGAGATTGATCGATGAATTGTACTAGGAGGGTATGAAAGGAGACGTTCAACGGTATGTGGAAGAATGTATAGTGTGTCAACGGAATAAGACTCTAGCTTTATCCCCTGCTGGGTTATTGACGCCATTGGAGATTCCTGATGTTATTTGGAGTGATATTTCCATGGATTTCATTGAAGGATTACCAAAACCGAAGGAATATGATGTTATTTACGTAGTGGTTGATAGATTGAGTAAGTATAGTCACTTTATTGCACTGAAACATCCATTCAATGCTAAGGTGGTAGCAGAAGTATTTGTAAAGGAGATCGTGCGCCTACATGGGTTTCCGAGTTCTATTGTATCTGATAGAGATAAGGTTTTTCTAAGTCATTTCTGGCGTGAGTTATTCAAGTTGGCAGGTACAAAATTACGACAAAGTTCAGCTTATCATCCCCAAACAGATGGTCAAACTGAAGTGGTGAATCGTAGCGTTGAGGCGTATTTGAGATGTTTTTGTAGTGAAAGGCCGAAGGAGTGGGTTGAGTGGTTACATTGGGCTGAATATTGGTACAATACCACATACCATAGTTCCATCGGTATTACACCATTTCAAGCAGTTTATGGTCGTTTACCACCTCCTCTTTTATATTATGGAGATACTACTATTGTTAATTCCACATTAGATCAACAATTGAAGGAGAGAGATGTGGCATTACGAGCATTGAAGGAGCATTTACGAGTGGCTCAAGAGAAGATGAAGAAAAATGCGGATAGGAGGAGGCGTGAGGTTGAGCATCAAGTTGGAGATTGGGTGTTTATAAAGATTAGACCATATCGTCAGTCAACTTTGCAACAACGGCGGAACGAGAAGCTTTCTCCTAAGTATTTTGGGCCTTTTAAAGTGTTGGATAGAATTGGGGAGGTCGTGTATCGTTTAGAGTTACCATCATTGGCATATACATCCGGTTTTCCATGTGTCGCAGTTGAAAAAGGTTTTGGGAGAACATCATACTATTCAACCTATGGTGCAACAATTGTCGGAAAGCCATGAGCGGTTAACTGAACCATCTGAGATTTTTGGATATCATAAGAATTCGACAACCAATGTTTGGGAGGTGTTGGTAGGATGGAAAGGGTTGCCGACCCATGAGGCGACTTGGGAACTTTTTGATGATTTCAAACAACAATTTCCAGATTTTCACCTTGAGGACAAGGTGGCTCTTGAAGGGGAGAGTAGTGTTAGACCTCCTATAATATTAACTTACAGCAGAAAAAGAAATAAAGGGAAGGGTATGGTGTGTGGGAGTGTGGCTTCTTCTAGCCAAACTTAATTAGTAGTTAATTTAATTAGTAATTATTTATGTCTTTGTTTTATTGTGGGGGAGGGAGGTAGTTAAGGGAGGAATAGGTGAGAGGGGGAAGACAGTTTTTATGTTTTCGGGAATTGCTTATACAGCAGTTGGGGAAGGAGACTGAGGGCAGTTTCCTTGTGTTCTAGTGTAGGGCTGTAATTTTGATGAAATTCAATAAGAAAGTTTGGTTGGAATCTTATCAAATCCACAACTTGGAATCCTCTCTGTTAGACATTCGAATTGTCTCTATAGCATTGTGGAAATCCATCCATTCAAGGGCTCAACATCTCTTAAAATTCCTTCTTAATAGCACCACCCAACCATTTGAGGAAGCAGACCAGCACTTATTTATTATTAAAATAAAAAATAACTTCTTTGTAGAGGTTATATTGTGGATTCTTGGGAAAGAAAACTTGAGCGCCCTATCTTCAATCCACAAATCCTCCTCCCAAAAATGGATTCTATCGCCTCTGATCAAATTTAA

mRNA sequence

ATGGGAGAGGGTCCAAACTTGGAATATCGTCAAAGAGGATATGGCCTTGGAGTGGCAAGAGGAGGAAGAGGTGGCAGCGTTAATGATGGTGATGGTGGTGCAGGAATGCAAGGTGGGAGAGGTGGAGTGGGTAGAGGCAATCGGAATGGAGCTGGAATTAACCTGAGTATAGAAGCGAGGGACAGCTATGAGGGCATTAACAATAGCATCACCCTGGGGAAGCACGATACAATGGCGCAGCAGAAATTTGATGAGCGGATGGAAGCAATGGATCAAGAGGTTTCGGAACTTCACGCTGAAATTCAGAAACTTCCCGGTATTGAAGAATCTCTACTTTCGCTGTCCTTGGGAGTTCAAGCTGAAAAGCAGCAAATCATGTTGACTACGATACCCGTAGACTTAGCCCGTGGTCAGAAATTGCCGGCAGGGGATGAGTCGGGCAGTCGTACCACAAGTTATATTGTGGATTCTTGGGAAAGAAAACTTGAGCGCCCTATCTTCAATCCACAAATCCTCCTCCCAAAAATGGATTCTATCGCCTCTGATCAAATTTAA

Coding sequence (CDS)

ATGGGAGAGGGTCCAAACTTGGAATATCGTCAAAGAGGATATGGCCTTGGAGTGGCAAGAGGAGGAAGAGGTGGCAGCGTTAATGATGGTGATGGTGGTGCAGGAATGCAAGGTGGGAGAGGTGGAGTGGGTAGAGGCAATCGGAATGGAGCTGGAATTAACCTGAGTATAGAAGCGAGGGACAGCTATGAGGGCATTAACAATAGCATCACCCTGGGGAAGCACGATACAATGGCGCAGCAGAAATTTGATGAGCGGATGGAAGCAATGGATCAAGAGGTTTCGGAACTTCACGCTGAAATTCAGAAACTTCCCGGTATTGAAGAATCTCTACTTTCGCTGTCCTTGGGAGTTCAAGCTGAAAAGCAGCAAATCATGTTGACTACGATACCCGTAGACTTAGCCCGTGGTCAGAAATTGCCGGCAGGGGATGAGTCGGGCAGTCGTACCACAAGTTATATTGTGGATTCTTGGGAAAGAAAACTTGAGCGCCCTATCTTCAATCCACAAATCCTCCTCCCAAAAATGGATTCTATCGCCTCTGATCAAATTTAA

Protein sequence

MGEGPNLEYRQRGYGLGVARGGRGGSVNDGDGGAGMQGGRGGVGRGNRNGAGINLSIEARDSYEGINNSITLGKHDTMAQQKFDERMEAMDQEVSELHAEIQKLPGIEESLLSLSLGVQAEKQQIMLTTIPVDLARGQKLPAGDESGSRTTSYIVDSWERKLERPIFNPQILLPKMDSIASDQI
Homology
The following BLAST results are available for this feature:
BLAST of ClCG02G009870.1 vs.
Match NameE-valueIdentityDescription
BLAST of ClCG02G009870.1 vs.
Match NameE-valueIdentityDescription
BLAST of ClCG02G009870.1 vs.
Match NameE-valueIdentityDescription
BLAST of ClCG02G009870.1 vs.
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 80..100
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 20..48

Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
ClCG02G009870ClCG02G009870gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
ClCG02G009870.1-exonClCG02G009870.1-exon-CG_Chr02:15573181..15573223exon
ClCG02G009870.1-exonClCG02G009870.1-exon-CG_Chr02:15573688..15573802exon
ClCG02G009870.1-exonClCG02G009870.1-exon-CG_Chr02:15573913..15573958exon
ClCG02G009870.1-exonClCG02G009870.1-exon-CG_Chr02:15575070..15575210exon
ClCG02G009870.1-exonClCG02G009870.1-exon-CG_Chr02:15575222..15575330exon
ClCG02G009870.1-exonClCG02G009870.1-exon-CG_Chr02:15580207..15580307exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
ClCG02G009870.1-cdsClCG02G009870.1-cds-CG_Chr02:15573181..15573223CDS
ClCG02G009870.1-cdsClCG02G009870.1-cds-CG_Chr02:15573688..15573802CDS
ClCG02G009870.1-cdsClCG02G009870.1-cds-CG_Chr02:15573913..15573958CDS
ClCG02G009870.1-cdsClCG02G009870.1-cds-CG_Chr02:15575070..15575210CDS
ClCG02G009870.1-cdsClCG02G009870.1-cds-CG_Chr02:15575222..15575330CDS
ClCG02G009870.1-cdsClCG02G009870.1-cds-CG_Chr02:15580207..15580307CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
ClCG02G009870.1ClCG02G009870.1-proteinpolypeptide