Homology
BLAST of ClCG01G017380.2 vs. NCBI nr
Match:
XP_038883471.1 (ribonuclease III domain-containing protein RNC1, chloroplastic [Benincasa hispida])
HSP 1 Score: 1047.3 bits (2707), Expect = 4.8e-302
Identity = 525/596 (88.09%), Postives = 529/596 (88.76%), Query Frame = 0
Query: 1 MELSSSFVKLSSPSPNYSFSSSLTPFIVKIHPNHPIFPNPSSANLRIFAVAIDPQQELPK 60
MELSSSFVKLSSPSPNYSFSSSLTPFIVKIHPNHPIFPNPSSANLRIFAVA+DPQQELPK
Sbjct: 1 MELSSSFVKLSSPSPNYSFSSSLTPFIVKIHPNHPIFPNPSSANLRIFAVAVDPQQELPK 60
Query: 61 NNPQRLLKELAERKRATSPKKKVPPRRFILRPPLDDKKLAERFLNSPQLTLKSFPLLSSC 120
NNPQRLLKELAERKRATSPKKKVPP+RFILRPPLDDKKLAERFLNSPQLTLKSFPLLSSC
Sbjct: 61 NNPQRLLKELAERKRATSPKKKVPPKRFILRPPLDDKKLAERFLNSPQLTLKSFPLLSSC 120
Query: 121 LPSSRLNNADKTWIDEYLLEAKQALGYPLEPSDSYGDDNPAKQFDTLLYLAFQHPSCERT 180
LPSSRLNNADKTW+DEYLLEAKQALGYPLEPSDSYGDDNPAKQFDTLLYLAFQHPSCERT
Sbjct: 121 LPSSRLNNADKTWMDEYLLEAKQALGYPLEPSDSYGDDNPAKQFDTLLYLAFQHPSCERT 180
Query: 181 KARHIRSGHSRLLFLGQYVIELALAEYFLQRYPRESPGPMRERVFALIGKRNLPKWIKAA 240
KARHIRSGHSRLLFLGQYVIELALAEYFLQRYPRESPGPMRERVFALIGKRNLPKWIKAA
Sbjct: 181 KARHIRSGHSRLLFLGQYVIELALAEYFLQRYPRESPGPMRERVFALIGKRNLPKWIKAA 240
Query: 241 SLQNLIFPYDDMDKMIRKDREPPVKIDRPEETLRSWHLIRVNVQAIIAAPGGLVPSGQFF 300
SLQNLIFPYDDMDKMIRKDREPPVK
Sbjct: 241 SLQNLIFPYDDMDKMIRKDREPPVK----------------------------------- 300
Query: 301 VNLKPHILSSNLVPAGYGRHSMNLASLSVFWALFGAIYLCFGMPEVYRVLFEVFGMDPDA 360
SVFWALFGAIYLCFGMPEVYRVLFEVFGMDPDA
Sbjct: 301 ---------------------------SVFWALFGAIYLCFGMPEVYRVLFEVFGMDPDA 360
Query: 361 EECEPRLRRQLEDVDYVSVEFEDKRISWQDM----PPEDALFAHPRLFRACVPPGMHRFR 420
EECEPRLRRQLEDVDYVSVEFEDKRISWQDM PPEDALFAHPRLFRACVPPGMHRFR
Sbjct: 361 EECEPRLRRQLEDVDYVSVEFEDKRISWQDMVSYKPPEDALFAHPRLFRACVPPGMHRFR 420
Query: 421 GNIWDYDSRPQVMQALGYPVPVADKIPDITEARNIELGLGLQLCFLHPSKHKFEHPRFCY 480
GNIWDYDSRPQVMQALGYP+PV DKIPDITEARNIELGLGLQLCFLHPSKHKFEHPRFCY
Sbjct: 421 GNIWDYDSRPQVMQALGYPLPVTDKIPDITEARNIELGLGLQLCFLHPSKHKFEHPRFCY 480
Query: 481 ERLEYLGQKIQDIVMAERLLMKHLDAPGKWLQEKHRRLLMNKFCGRYLREKYLHKLIIYS 540
ERLEYLGQKIQDIVMAERLLMKHLDAPGKWLQEKHRRLLMNKFCGRYLREKYLHKLIIYS
Sbjct: 481 ERLEYLGQKIQDIVMAERLLMKHLDAPGKWLQEKHRRLLMNKFCGRYLREKYLHKLIIYS 534
Query: 541 EKVQDAYENNRRLRNPATTAVQQALHGLSYVVYGKPDVRRLMFEVFDFEQIQPKAV 593
EKVQDAYENNRRLRNPATTAVQQALHGLSYVVYGKPDVRRLMFEVFDFEQIQPKAV
Sbjct: 541 EKVQDAYENNRRLRNPATTAVQQALHGLSYVVYGKPDVRRLMFEVFDFEQIQPKAV 534
BLAST of ClCG01G017380.2 vs. NCBI nr
Match:
XP_008440359.1 (PREDICTED: ribonuclease III domain-containing protein RNC1, chloroplastic [Cucumis melo])
HSP 1 Score: 1043.1 bits (2696), Expect = 9.1e-301
Identity = 523/596 (87.75%), Postives = 527/596 (88.42%), Query Frame = 0
Query: 1 MELSSSFVKLSSPSPNYSFSSSLTPFIVKIHPNHPIFPNPSSANLRIFAVAIDPQQELPK 60
MELSSSFVKLSSPSPNYSFSSSLTPFIVKIHPNHPIFPNPSS NLRIFAVA+DPQQELPK
Sbjct: 1 MELSSSFVKLSSPSPNYSFSSSLTPFIVKIHPNHPIFPNPSSGNLRIFAVAVDPQQELPK 60
Query: 61 NNPQRLLKELAERKRATSPKKKVPPRRFILRPPLDDKKLAERFLNSPQLTLKSFPLLSSC 120
NNPQRLLKELAERKRATSPKKKVPPRRFILRPPLDDKKLAERFLNSPQLTLKSFPLLSSC
Sbjct: 61 NNPQRLLKELAERKRATSPKKKVPPRRFILRPPLDDKKLAERFLNSPQLTLKSFPLLSSC 120
Query: 121 LPSSRLNNADKTWIDEYLLEAKQALGYPLEPSDSYGDDNPAKQFDTLLYLAFQHPSCERT 180
LPSSRLNNADKTW+DEYLLEAKQALGYPL+PSDSYGDDNPAKQFDTLLYLAFQHPSCERT
Sbjct: 121 LPSSRLNNADKTWMDEYLLEAKQALGYPLDPSDSYGDDNPAKQFDTLLYLAFQHPSCERT 180
Query: 181 KARHIRSGHSRLLFLGQYVIELALAEYFLQRYPRESPGPMRERVFALIGKRNLPKWIKAA 240
KARHIRSGHSRLLFLGQYVIELALAEYFL RYPRESPGPMRERVFALIGKRNLPKWIKAA
Sbjct: 181 KARHIRSGHSRLLFLGQYVIELALAEYFLLRYPRESPGPMRERVFALIGKRNLPKWIKAA 240
Query: 241 SLQNLIFPYDDMDKMIRKDREPPVKIDRPEETLRSWHLIRVNVQAIIAAPGGLVPSGQFF 300
SLQNLIFPYDDMDKMIRKDREPPVK
Sbjct: 241 SLQNLIFPYDDMDKMIRKDREPPVK----------------------------------- 300
Query: 301 VNLKPHILSSNLVPAGYGRHSMNLASLSVFWALFGAIYLCFGMPEVYRVLFEVFGMDPDA 360
SVFWALFGAIYLCFGMPEVYRVLFEVFGMDPDA
Sbjct: 301 ---------------------------SVFWALFGAIYLCFGMPEVYRVLFEVFGMDPDA 360
Query: 361 EECEPRLRRQLEDVDYVSVEFEDKRISWQDM----PPEDALFAHPRLFRACVPPGMHRFR 420
EECEPRLRRQLEDVDYVSVEFEDKRISWQDM PPEDALFAHPRLFRACVPPGMHRFR
Sbjct: 361 EECEPRLRRQLEDVDYVSVEFEDKRISWQDMISYKPPEDALFAHPRLFRACVPPGMHRFR 420
Query: 421 GNIWDYDSRPQVMQALGYPVPVADKIPDITEARNIELGLGLQLCFLHPSKHKFEHPRFCY 480
GNIWDYDSRPQVMQALGYP+PV DKIPDITEARNIELGLGLQLCFLHPSKHKFEHPRFCY
Sbjct: 421 GNIWDYDSRPQVMQALGYPLPVVDKIPDITEARNIELGLGLQLCFLHPSKHKFEHPRFCY 480
Query: 481 ERLEYLGQKIQDIVMAERLLMKHLDAPGKWLQEKHRRLLMNKFCGRYLREKYLHKLIIYS 540
ERLEYLGQKIQDIVMAERLLMKHLDAPGKWLQEKHRRLLMNKFCGRYLREKYLHKLIIYS
Sbjct: 481 ERLEYLGQKIQDIVMAERLLMKHLDAPGKWLQEKHRRLLMNKFCGRYLREKYLHKLIIYS 534
Query: 541 EKVQDAYENNRRLRNPATTAVQQALHGLSYVVYGKPDVRRLMFEVFDFEQIQPKAV 593
EKVQDAYENNRRLRNPATTAVQQALHGLSYVVYGKPDVRRLMFEVFDFEQIQPKAV
Sbjct: 541 EKVQDAYENNRRLRNPATTAVQQALHGLSYVVYGKPDVRRLMFEVFDFEQIQPKAV 534
BLAST of ClCG01G017380.2 vs. NCBI nr
Match:
XP_004141878.1 (ribonuclease III domain-containing protein RNC1, chloroplastic isoform X1 [Cucumis sativus] >KGN48593.1 hypothetical protein Csa_003755 [Cucumis sativus])
HSP 1 Score: 1026.9 bits (2654), Expect = 6.7e-296
Identity = 514/596 (86.24%), Postives = 525/596 (88.09%), Query Frame = 0
Query: 1 MELSSSFVKLSSPSPNYSFSSSLTPFIVKIHPNHPIFPNPSSANLRIFAVAIDPQQELPK 60
MELSSSFVKLSSPS NYSFSSSLTPFIVKIHPNHPIFPNPSSANLR+FAVA+DPQQELPK
Sbjct: 1 MELSSSFVKLSSPS-NYSFSSSLTPFIVKIHPNHPIFPNPSSANLRVFAVAVDPQQELPK 60
Query: 61 NNPQRLLKELAERKRATSPKKKVPPRRFILRPPLDDKKLAERFLNSPQLTLKSFPLLSSC 120
NNPQRLLKELAERKRATSPKKKVPPRRFILRPPLDDK+LAERFLNSPQLTLKSFPLLSSC
Sbjct: 61 NNPQRLLKELAERKRATSPKKKVPPRRFILRPPLDDKRLAERFLNSPQLTLKSFPLLSSC 120
Query: 121 LPSSRLNNADKTWIDEYLLEAKQALGYPLEPSDSYGDDNPAKQFDTLLYLAFQHPSCERT 180
LPSSRLNNADKTW+DEYLLEAKQALGYPLEPSDSYGDDNPAKQFDTLLYLAFQHPSCERT
Sbjct: 121 LPSSRLNNADKTWMDEYLLEAKQALGYPLEPSDSYGDDNPAKQFDTLLYLAFQHPSCERT 180
Query: 181 KARHIRSGHSRLLFLGQYVIELALAEYFLQRYPRESPGPMRERVFALIGKRNLPKWIKAA 240
KARHIRSGHSRL FLGQYV+ELALAEYFLQRYPRESPGPMRERVFALIGKRNLPKWIKAA
Sbjct: 181 KARHIRSGHSRLFFLGQYVLELALAEYFLQRYPRESPGPMRERVFALIGKRNLPKWIKAA 240
Query: 241 SLQNLIFPYDDMDKMIRKDREPPVKIDRPEETLRSWHLIRVNVQAIIAAPGGLVPSGQFF 300
SLQNLIFPYDDMDK+IRKDREPPVK
Sbjct: 241 SLQNLIFPYDDMDKIIRKDREPPVK----------------------------------- 300
Query: 301 VNLKPHILSSNLVPAGYGRHSMNLASLSVFWALFGAIYLCFGMPEVYRVLFEVFGMDPDA 360
SVFWALFGAIYLCFGMPEVYRVLFEVFGMDPDA
Sbjct: 301 ---------------------------SVFWALFGAIYLCFGMPEVYRVLFEVFGMDPDA 360
Query: 361 EECEPRLRRQLEDVDYVSVEFEDKRISWQDM----PPEDALFAHPRLFRACVPPGMHRFR 420
+ECEPRLRRQLEDVDYVSVEFEDKRI WQDM PPEDALFAHPRLFRACVPPGMHRFR
Sbjct: 361 KECEPRLRRQLEDVDYVSVEFEDKRIGWQDMVSYKPPEDALFAHPRLFRACVPPGMHRFR 420
Query: 421 GNIWDYDSRPQVMQALGYPVPVADKIPDITEARNIELGLGLQLCFLHPSKHKFEHPRFCY 480
GNIWDYDSRPQVMQALGYP+PV DKIPDITEARNIELGLGLQLCFLHPSKHKFEHPRFCY
Sbjct: 421 GNIWDYDSRPQVMQALGYPLPVTDKIPDITEARNIELGLGLQLCFLHPSKHKFEHPRFCY 480
Query: 481 ERLEYLGQKIQDIVMAERLLMKHLDAPGKWLQEKHRRLLMNKFCGRYLREKYLHKLIIYS 540
ERLEYLGQKIQDIVMAERLLMKHLDAPG+WLQ KHRRLLMNKFCGRYLRE+YLHKLIIYS
Sbjct: 481 ERLEYLGQKIQDIVMAERLLMKHLDAPGRWLQVKHRRLLMNKFCGRYLRERYLHKLIIYS 533
Query: 541 EKVQDAYENNRRLRNPATTAVQQALHGLSYVVYGKPDVRRLMFEVFDFEQIQPKAV 593
EKVQDAYENNRRLRNPATTAVQQALHGLSYVVYGKPDVRR+MFEVFDFEQIQPKAV
Sbjct: 541 EKVQDAYENNRRLRNPATTAVQQALHGLSYVVYGKPDVRRIMFEVFDFEQIQPKAV 533
BLAST of ClCG01G017380.2 vs. NCBI nr
Match:
XP_022133289.1 (ribonuclease III domain-containing protein RNC1, chloroplastic [Momordica charantia])
HSP 1 Score: 1023.8 bits (2646), Expect = 5.7e-295
Identity = 511/596 (85.74%), Postives = 525/596 (88.09%), Query Frame = 0
Query: 1 MELSSSFVKLSSPSPNYSFSSSLTPFIVKIHPNHPIFPNPSSANLRIFAVAIDPQQELPK 60
MELSSSFV+L+SP+PNYSFSSSLTPF KI+PN+P FPNP+S NLRIFAVA+DPQQELPK
Sbjct: 1 MELSSSFVQLASPTPNYSFSSSLTPFHFKIYPNNPSFPNPTSGNLRIFAVAVDPQQELPK 60
Query: 61 NNPQRLLKELAERKRATSPKKKVPPRRFILRPPLDDKKLAERFLNSPQLTLKSFPLLSSC 120
NNPQRLLKELAERKRATSPKK+VPPRRFILRPPLDDKKLAERFLNSPQLTLKSFPLLSSC
Sbjct: 61 NNPQRLLKELAERKRATSPKKRVPPRRFILRPPLDDKKLAERFLNSPQLTLKSFPLLSSC 120
Query: 121 LPSSRLNNADKTWIDEYLLEAKQALGYPLEPSDSYGDDNPAKQFDTLLYLAFQHPSCERT 180
LPSSRLNNADKTW+DEYLLEAKQALGYPLEPSD+YGDDNPAKQFDTLLYLAFQHPSCERT
Sbjct: 121 LPSSRLNNADKTWMDEYLLEAKQALGYPLEPSDNYGDDNPAKQFDTLLYLAFQHPSCERT 180
Query: 181 KARHIRSGHSRLLFLGQYVIELALAEYFLQRYPRESPGPMRERVFALIGKRNLPKWIKAA 240
KARHIRSGHSRLLFLGQYV+ELALAEYFLQRYPRESPGPMRERVFALIGKR+LPKWIKAA
Sbjct: 181 KARHIRSGHSRLLFLGQYVLELALAEYFLQRYPRESPGPMRERVFALIGKRSLPKWIKAA 240
Query: 241 SLQNLIFPYDDMDKMIRKDREPPVKIDRPEETLRSWHLIRVNVQAIIAAPGGLVPSGQFF 300
SLQNLIFPYDDMDKMIRKDREPPVK
Sbjct: 241 SLQNLIFPYDDMDKMIRKDREPPVK----------------------------------- 300
Query: 301 VNLKPHILSSNLVPAGYGRHSMNLASLSVFWALFGAIYLCFGMPEVYRVLFEVFGMDPDA 360
SVFWALFGAIYLCFGMPEVYRVLFEVFGMDPDA
Sbjct: 301 ---------------------------SVFWALFGAIYLCFGMPEVYRVLFEVFGMDPDA 360
Query: 361 EECEPRLRRQLEDVDYVSVEFEDKRISWQDM----PPEDALFAHPRLFRACVPPGMHRFR 420
EECEPRLRRQLEDVDYVSVEFEDK+ISWQDM PPEDALFAHPRLFRACVPPGMHRFR
Sbjct: 361 EECEPRLRRQLEDVDYVSVEFEDKKISWQDMVAYKPPEDALFAHPRLFRACVPPGMHRFR 420
Query: 421 GNIWDYDSRPQVMQALGYPVPVADKIPDITEARNIELGLGLQLCFLHPSKHKFEHPRFCY 480
GNIWDYDSRPQVMQALGYPVPV+DKIPDITEARNIELGLGLQLCFLHPSKHKFEHPRFCY
Sbjct: 421 GNIWDYDSRPQVMQALGYPVPVSDKIPDITEARNIELGLGLQLCFLHPSKHKFEHPRFCY 480
Query: 481 ERLEYLGQKIQDIVMAERLLMKHLDAPGKWLQEKHRRLLMNKFCGRYLREKYLHKLIIYS 540
ERLEYLGQKIQDIVMAERLLMKHLDAPGKWLQEKHRRLLMNKFCGRYLREKYLHKLIIYS
Sbjct: 481 ERLEYLGQKIQDIVMAERLLMKHLDAPGKWLQEKHRRLLMNKFCGRYLREKYLHKLIIYS 534
Query: 541 EKVQDAYENNRRLRNPATTAVQQALHGLSYVVYGKPDVRRLMFEVFDFEQIQPKAV 593
EKVQDAYENNRRLRNPATTAVQQALHGLSY VYGKPDVRRLMFEVFDFEQIQPKAV
Sbjct: 541 EKVQDAYENNRRLRNPATTAVQQALHGLSYAVYGKPDVRRLMFEVFDFEQIQPKAV 534
BLAST of ClCG01G017380.2 vs. NCBI nr
Match:
XP_023543359.1 (ribonuclease III domain-containing protein RNC1, chloroplastic-like [Cucurbita pepo subsp. pepo])
HSP 1 Score: 1020.8 bits (2638), Expect = 4.8e-294
Identity = 509/596 (85.40%), Postives = 522/596 (87.58%), Query Frame = 0
Query: 1 MELSSSFVKLSSPSPNYSFSSSLTPFIVKIHPNHPIFPNPSSANLRIFAVAIDPQQELPK 60
MELSS FVKLSSP+PN+SFSSSLTPF+VKIHPN+P NPSS +LRIFAVA+DPQQELPK
Sbjct: 1 MELSSCFVKLSSPTPNFSFSSSLTPFVVKIHPNNPSLSNPSSGSLRIFAVAVDPQQELPK 60
Query: 61 NNPQRLLKELAERKRATSPKKKVPPRRFILRPPLDDKKLAERFLNSPQLTLKSFPLLSSC 120
NNPQRLLKEL ERKRATSPKKKVPPRRFILRPPLDDKKLAERFLNSPQLTLKSFPLLSSC
Sbjct: 61 NNPQRLLKELEERKRATSPKKKVPPRRFILRPPLDDKKLAERFLNSPQLTLKSFPLLSSC 120
Query: 121 LPSSRLNNADKTWIDEYLLEAKQALGYPLEPSDSYGDDNPAKQFDTLLYLAFQHPSCERT 180
LPSSRLNNADKTW+DEYLLEAKQALGYPLEPSDSYGDDNPAKQFDTLLYLAFQHPSCERT
Sbjct: 121 LPSSRLNNADKTWMDEYLLEAKQALGYPLEPSDSYGDDNPAKQFDTLLYLAFQHPSCERT 180
Query: 181 KARHIRSGHSRLLFLGQYVIELALAEYFLQRYPRESPGPMRERVFALIGKRNLPKWIKAA 240
KARHIRSGHSRLLFLGQYVIELALAEYFLQRYPRESPGPMRERVFALIGKRNLP+WIKAA
Sbjct: 181 KARHIRSGHSRLLFLGQYVIELALAEYFLQRYPRESPGPMRERVFALIGKRNLPQWIKAA 240
Query: 241 SLQNLIFPYDDMDKMIRKDREPPVKIDRPEETLRSWHLIRVNVQAIIAAPGGLVPSGQFF 300
SLQNLIFPYDDMDKM+RKDREPPVK
Sbjct: 241 SLQNLIFPYDDMDKMVRKDREPPVK----------------------------------- 300
Query: 301 VNLKPHILSSNLVPAGYGRHSMNLASLSVFWALFGAIYLCFGMPEVYRVLFEVFGMDPDA 360
SVFWALFGAIYLCFGMPEVYRVLFEVFGMDPDA
Sbjct: 301 ---------------------------SVFWALFGAIYLCFGMPEVYRVLFEVFGMDPDA 360
Query: 361 EECEPRLRRQLEDVDYVSVEFEDKRISWQDM----PPEDALFAHPRLFRACVPPGMHRFR 420
EECEPRLRRQLEDVDYVSVEFEDK+ISWQDM PPEDALFAHPRLFRACVPPGMHRFR
Sbjct: 361 EECEPRLRRQLEDVDYVSVEFEDKKISWQDMVAYKPPEDALFAHPRLFRACVPPGMHRFR 420
Query: 421 GNIWDYDSRPQVMQALGYPVPVADKIPDITEARNIELGLGLQLCFLHPSKHKFEHPRFCY 480
GNIWDYDSRPQVMQALGYPVPV DKIP+ITEARNIELGLGLQLCFLHPSKHKFEHPRFCY
Sbjct: 421 GNIWDYDSRPQVMQALGYPVPVTDKIPEITEARNIELGLGLQLCFLHPSKHKFEHPRFCY 480
Query: 481 ERLEYLGQKIQDIVMAERLLMKHLDAPGKWLQEKHRRLLMNKFCGRYLREKYLHKLIIYS 540
ERLEYLGQKIQDIVMAERLLMKHLDAPGKWLQEKHRRLLMNKFCGRYLREKYLHKLI+YS
Sbjct: 481 ERLEYLGQKIQDIVMAERLLMKHLDAPGKWLQEKHRRLLMNKFCGRYLREKYLHKLIVYS 534
Query: 541 EKVQDAYENNRRLRNPATTAVQQALHGLSYVVYGKPDVRRLMFEVFDFEQIQPKAV 593
E+VQDAYENNRRLRNPATTAVQQALHGLSY VYGKPDVRRLMFEVFDFEQIQPKAV
Sbjct: 541 EQVQDAYENNRRLRNPATTAVQQALHGLSYTVYGKPDVRRLMFEVFDFEQIQPKAV 534
BLAST of ClCG01G017380.2 vs. ExPASy Swiss-Prot
Match:
Q9SZV0 (Ribonuclease III domain-containing protein RNC1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RNC1 PE=2 SV=1)
HSP 1 Score: 861.7 bits (2225), Expect = 4.9e-249
Identity = 433/594 (72.90%), Postives = 475/594 (79.97%), Query Frame = 0
Query: 4 SSSFVKL-SSPSPNYSFSSSLTPFIVKIHPNHPIFPNPSSANLRIFAVAIDPQQELPKNN 63
SSS +++ SS +P SFSSS++ F K I NLRI A Q LP+++
Sbjct: 9 SSSLLRICSSSAPEISFSSSISQFPSK---TQSILTKSRFQNLRICASVTAETQGLPRDS 68
Query: 64 PQRLLKELAERKRATSPKKKVPPRRFILRPPLDDKKLAERFLNSPQLTLKSFPLLSSCLP 123
PQRLLKELA+RK AT PKKKVPP+RFILRPPLDDKKLAERFLNSPQL+LKSFPLLSSCLP
Sbjct: 69 PQRLLKELAQRKTATGPKKKVPPKRFILRPPLDDKKLAERFLNSPQLSLKSFPLLSSCLP 128
Query: 124 SSRLNNADKTWIDEYLLEAKQALGYPLEPSDSYGDDNPAKQFDTLLYLAFQHPSCERTKA 183
SS+LNNADKTWIDEYLLE KQALGY LEPS+S GDDNPAK FDTLLYLAFQHPSC+R +A
Sbjct: 129 SSKLNNADKTWIDEYLLEVKQALGYSLEPSESLGDDNPAKHFDTLLYLAFQHPSCDRARA 188
Query: 184 RHIRSGHSRLLFLGQYVIELALAEYFLQRYPRESPGPMRERVFALIGKRNLPKWIKAASL 243
RH+++GHSRL FLGQYV+ELAL E+FLQRYPRESPGPMRERVFALIGKR LPKWIKAASL
Sbjct: 189 RHVKNGHSRLWFLGQYVLELALTEFFLQRYPRESPGPMRERVFALIGKRYLPKWIKAASL 248
Query: 244 QNLIFPYDDMDKMIRKDREPPVKIDRPEETLRSWHLIRVNVQAIIAAPGGLVPSGQFFVN 303
QNLIFPYDDMDK+IRK+REPPVK
Sbjct: 249 QNLIFPYDDMDKLIRKEREPPVK------------------------------------- 308
Query: 304 LKPHILSSNLVPAGYGRHSMNLASLSVFWALFGAIYLCFGMPEVYRVLFEVFGMDPDAEE 363
SVFWALFGAIYLCFGMPEVYRVLFEVFGMDPDA+E
Sbjct: 309 -------------------------SVFWALFGAIYLCFGMPEVYRVLFEVFGMDPDADE 368
Query: 364 CEPRLRRQLEDVDYVSVEFEDKRISWQDM----PPEDALFAHPRLFRACVPPGMHRFRGN 423
C+PR RRQLEDVDYVSVEFE K++ WQD+ PPEDALFAHPRLFRACVPPGMHRFRGN
Sbjct: 369 CQPRSRRQLEDVDYVSVEFEGKKLGWQDIATYKPPEDALFAHPRLFRACVPPGMHRFRGN 428
Query: 424 IWDYDSRPQVMQALGYPVPVADKIPDITEARNIELGLGLQLCFLHPSKHKFEHPRFCYER 483
IWD+DS+P+VMQ LGYP+ + D+I +ITEARNIELGLGLQLCFLHPSKHKFEHPRFC+ER
Sbjct: 429 IWDFDSKPKVMQTLGYPLTMNDRIKEITEARNIELGLGLQLCFLHPSKHKFEHPRFCFER 488
Query: 484 LEYLGQKIQDIVMAERLLMKHLDAPGKWLQEKHRRLLMNKFCGRYLREKYLHKLIIYSEK 543
LEY+GQKIQDI MAERLLMKHLDAPGKWLQEKHRRLLMNKFCGRYLREK LH IIYSE+
Sbjct: 489 LEYVGQKIQDIAMAERLLMKHLDAPGKWLQEKHRRLLMNKFCGRYLREKRLHNFIIYSEE 537
Query: 544 VQDAYENNRRLRNPATTAVQQALHGLSYVVYGKPDVRRLMFEVFDFEQIQPKAV 593
V D YE+NRRLRNPATTAVQQA+HGL+Y +YGKPDVRRLMFEVFDFEQIQPKAV
Sbjct: 549 VHDRYEHNRRLRNPATTAVQQAIHGLAYTIYGKPDVRRLMFEVFDFEQIQPKAV 537
BLAST of ClCG01G017380.2 vs. ExPASy Swiss-Prot
Match:
Q8S1Z0 (Ribonuclease III domain-containing protein RNC1, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=RNC1 PE=2 SV=1)
HSP 1 Score: 785.0 bits (2026), Expect = 5.8e-226
Identity = 382/544 (70.22%), Postives = 435/544 (79.96%), Query Frame = 0
Query: 59 PKNNPQRLLKELAERKRATSPKKKVPPRRFILRPPLDDKKLAERFLNSPQLTLKSFPLLS 118
P N+P RLL+ELAERK+A SPKKK PPRRFIL+PPLDD++L +RFL+SPQL+LK+ PLLS
Sbjct: 52 PANSPSRLLRELAERKKAVSPKKKHPPRRFILKPPLDDERLTQRFLSSPQLSLKALPLLS 111
Query: 119 SCLPSSRLNNADKTWIDEYLLEAKQALGYPLEPSDSYGDDN----PAKQFDTLLYLAFQH 178
SCLPS+ L+ AD+TW+DEYLLEAKQALGYPL PS++ GD + PA+ FD LLYLAFQH
Sbjct: 112 SCLPSAPLSAADRTWMDEYLLEAKQALGYPLAPSETLGDGDDDGCPARHFDVLLYLAFQH 171
Query: 179 --PSCERTKARHIRSGHSRLLFLGQYVIELALAEYFLQRYPRESPGPMRERVFALIGKRN 238
SCERT+ RH+RSGHSRL FLGQYV+ELA E+FLQRYPRESPGPMRERVFALIGKR
Sbjct: 172 LDTSCERTRTRHVRSGHSRLWFLGQYVLELAFCEFFLQRYPRESPGPMRERVFALIGKRA 231
Query: 239 LPKWIKAASLQNLIFPYDDMDKMIRKDREPPVKIDRPEETLRSWHLIRVNVQAIIAAPGG 298
+PKWIKAASL NL+FPYDD+DKMIRKDREPP K
Sbjct: 232 IPKWIKAASLHNLVFPYDDLDKMIRKDREPPAK--------------------------- 291
Query: 299 LVPSGQFFVNLKPHILSSNLVPAGYGRHSMNLASLSVFWALFGAIYLCFGMPEVYRVLFE 358
+VFWALFGAIYLCFGMPEVYRVLFE
Sbjct: 292 -----------------------------------AVFWALFGAIYLCFGMPEVYRVLFE 351
Query: 359 VFGMDPDAEECEPRLRRQLEDVDYVSVEFEDKRISWQDM----PPEDALFAHPRLFRACV 418
FGMDP+ E C+P+LRRQLEDVDYVSVEFE ++++WQD+ PP DALFAHPRLFRACV
Sbjct: 352 AFGMDPEDESCQPKLRRQLEDVDYVSVEFEKRQLTWQDVAAYRPPPDALFAHPRLFRACV 411
Query: 419 PPGMHRFRGNIWDYDSRPQVMQALGYPVPVADKIPDITEARNIELGLGLQLCFLHPSKHK 478
PPGMHRFRGNIWD+D+RP+VM LGYP+P+ D+IP+ITEARNIELGLGLQLCFLHPSKHK
Sbjct: 412 PPGMHRFRGNIWDFDNRPKVMNTLGYPLPMNDRIPEITEARNIELGLGLQLCFLHPSKHK 471
Query: 479 FEHPRFCYERLEYLGQKIQDIVMAERLLMKHLDAPGKWLQEKHRRLLMNKFCGRYLREKY 538
FEHPRFC ERLEY+GQKIQD+VMAERLLMKHLDAPG+WL EKHRRLLMNK+CGRYLR+K+
Sbjct: 472 FEHPRFCLERLEYVGQKIQDLVMAERLLMKHLDAPGRWLAEKHRRLLMNKYCGRYLRDKH 531
Query: 539 LHKLIIYSEKVQDAYENNRRLRNPATTAVQQALHGLSYVVYGKPDVRRLMFEVFDFEQIQ 593
LH IIY E VQD +E+NRRLRNP+TTAVQQA+HGL+Y VYGKPDVRRLMFEVFDFEQ+Q
Sbjct: 532 LHHYIIYGESVQDRFEHNRRLRNPSTTAVQQAIHGLAYCVYGKPDVRRLMFEVFDFEQVQ 533
BLAST of ClCG01G017380.2 vs. ExPASy Swiss-Prot
Match:
A6YSL1 (Ribonuclease III domain-containing protein RNC1, chloroplastic OS=Zea mays OX=4577 GN=RNC1 PE=1 SV=1)
HSP 1 Score: 784.3 bits (2024), Expect = 1.0e-225
Identity = 391/585 (66.84%), Postives = 449/585 (76.75%), Query Frame = 0
Query: 22 SLTPFIVKIHPNHPIFPNPSSANLRIFAVAID------PQQELPKNNPQRLLKELAERKR 81
+LTP +H SS +R+ AVA D P E P N+P RLL+ELA+RK+
Sbjct: 12 TLTPLPFSLH--------SSSRRVRVLAVAADQTPPPAPPSE-PANSPSRLLRELAQRKK 71
Query: 82 ATSPKKKVPPRRFILRPPLDDKKLAERFLNSPQLTLKSFPLLSSCLPSSRLNNADKTWID 141
A SPKKK PPRRFIL+PPLDD++L RFL+SPQL+LK+ PLLSSCLPS+ L+ AD+TW+D
Sbjct: 72 AVSPKKKHPPRRFILKPPLDDERLTRRFLSSPQLSLKALPLLSSCLPSAPLSTADRTWMD 131
Query: 142 EYLLEAKQALGYPLEPSDSY--GDDNPAKQFDTLLYLAFQH--PSCERTKARHIRSGHSR 201
EYLLEAKQALGYPL PS++ GDD PA+ FD L YLAFQH PS ERT+ RH+R+GHSR
Sbjct: 132 EYLLEAKQALGYPLAPSETLGEGDDCPARHFDVLFYLAFQHLDPSSERTRMRHVRNGHSR 191
Query: 202 LLFLGQYVIELALAEYFLQRYPRESPGPMRERVFALIGKRNLPKWIKAASLQNLIFPYDD 261
L FLGQYV+ELA E+FLQRYPRESPGPMRERVFALIGK+ LP+W+KAASL NL+FPYDD
Sbjct: 192 LWFLGQYVLELAFCEFFLQRYPRESPGPMRERVFALIGKKVLPRWLKAASLHNLVFPYDD 251
Query: 262 MDKMIRKDREPPVKIDRPEETLRSWHLIRVNVQAIIAAPGGLVPSGQFFVNLKPHILSSN 321
+DKMIRKDREPP K
Sbjct: 252 LDKMIRKDREPPSK---------------------------------------------- 311
Query: 322 LVPAGYGRHSMNLASLSVFWALFGAIYLCFGMPEVYRVLFEVFGMDPDAEECEPRLRRQL 381
+VFWA+FGAIYLCFGMPEVYRVLFE FGMDPD E C+P+LRRQL
Sbjct: 312 ----------------AVFWAIFGAIYLCFGMPEVYRVLFEAFGMDPDDESCQPKLRRQL 371
Query: 382 EDVDYVSVEFEDKRISWQDM----PPEDALFAHPRLFRACVPPGMHRFRGNIWDYDSRPQ 441
EDVDYVSVEFE ++++WQD+ PP DALFAHPRLFRACVPPGMHRFRGNIWD+DSRP+
Sbjct: 372 EDVDYVSVEFEKRQLTWQDVAAYRPPPDALFAHPRLFRACVPPGMHRFRGNIWDFDSRPK 431
Query: 442 VMQALGYPVPVADKIPDITEARNIELGLGLQLCFLHPSKHKFEHPRFCYERLEYLGQKIQ 501
VM LGYP+P+ D+IP+ITEARNIELGLGLQLCFLHPSKHKFEHPRFCYERLEY+GQKIQ
Sbjct: 432 VMTTLGYPLPMNDRIPEITEARNIELGLGLQLCFLHPSKHKFEHPRFCYERLEYVGQKIQ 491
Query: 502 DIVMAERLLMKHLDAPGKWLQEKHRRLLMNKFCGRYLREKYLHKLIIYSEKVQDAYENNR 561
D+VMAERLLMKHLDAPG+WL EKHRR LMNK+CGRYLR+K+L IIY E VQD +E+NR
Sbjct: 492 DLVMAERLLMKHLDAPGRWLAEKHRRTLMNKYCGRYLRDKHLQHYIIYGETVQDRFEHNR 525
Query: 562 RLRNPATTAVQQALHGLSYVVYGKPDVRRLMFEVFDFEQIQPKAV 593
RLRNP+TT+VQQALHGL+Y VYGKPDVRRLMFEVFDFEQ+QPKAV
Sbjct: 552 RLRNPSTTSVQQALHGLAYCVYGKPDVRRLMFEVFDFEQVQPKAV 525
BLAST of ClCG01G017380.2 vs. ExPASy Swiss-Prot
Match:
Q5L0Q3 (Ribonuclease 3 OS=Geobacillus kaustophilus (strain HTA426) OX=235909 GN=rnc PE=3 SV=1)
HSP 1 Score: 52.0 bits (123), Expect = 2.7e-05
Identity = 26/82 (31.71%), Postives = 43/82 (52.44%), Query Frame = 0
Query: 165 DTLLYLAFQHPSCERTKARHIRSGHSRLLFLGQYVIELALAEYFLQRYPRESPGPMRERV 224
+ LL AF H S R + + RL FLG V+EL +++Y Q++P S G + +
Sbjct: 32 EKLLIQAFTHSSYVNEHRRRLHEDNERLEFLGDAVLELTVSQYLFQKFPHMSEGQLTKLR 91
Query: 225 FALIGKRNLPKWIKAASLQNLI 247
A++ + +L K+ A S L+
Sbjct: 92 AAIVCEPSLVKFANALSFGELV 113
BLAST of ClCG01G017380.2 vs. ExPASy Swiss-Prot
Match:
A4IM67 (Ribonuclease 3 OS=Geobacillus thermodenitrificans (strain NG80-2) OX=420246 GN=rnc PE=3 SV=1)
HSP 1 Score: 52.0 bits (123), Expect = 2.7e-05
Identity = 27/84 (32.14%), Postives = 43/84 (51.19%), Query Frame = 0
Query: 163 QFDTLLYLAFQHPSCERTKARHIRSGHSRLLFLGQYVIELALAEYFLQRYPRESPGPMRE 222
Q + LL AF H S R + RL FLG V+EL +++Y Q++P S G + +
Sbjct: 30 QNEKLLIQAFTHSSYVNEHRRRFHEDNERLEFLGDAVLELTVSQYLFQKFPHMSEGQLTK 89
Query: 223 RVFALIGKRNLPKWIKAASLQNLI 247
A++ + +L K+ A S L+
Sbjct: 90 LRAAIVCEPSLVKFANALSFGELV 113
BLAST of ClCG01G017380.2 vs. ExPASy TrEMBL
Match:
A0A1S3B1J9 (ribonuclease III domain-containing protein RNC1, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103484834 PE=4 SV=1)
HSP 1 Score: 1043.1 bits (2696), Expect = 4.4e-301
Identity = 523/596 (87.75%), Postives = 527/596 (88.42%), Query Frame = 0
Query: 1 MELSSSFVKLSSPSPNYSFSSSLTPFIVKIHPNHPIFPNPSSANLRIFAVAIDPQQELPK 60
MELSSSFVKLSSPSPNYSFSSSLTPFIVKIHPNHPIFPNPSS NLRIFAVA+DPQQELPK
Sbjct: 1 MELSSSFVKLSSPSPNYSFSSSLTPFIVKIHPNHPIFPNPSSGNLRIFAVAVDPQQELPK 60
Query: 61 NNPQRLLKELAERKRATSPKKKVPPRRFILRPPLDDKKLAERFLNSPQLTLKSFPLLSSC 120
NNPQRLLKELAERKRATSPKKKVPPRRFILRPPLDDKKLAERFLNSPQLTLKSFPLLSSC
Sbjct: 61 NNPQRLLKELAERKRATSPKKKVPPRRFILRPPLDDKKLAERFLNSPQLTLKSFPLLSSC 120
Query: 121 LPSSRLNNADKTWIDEYLLEAKQALGYPLEPSDSYGDDNPAKQFDTLLYLAFQHPSCERT 180
LPSSRLNNADKTW+DEYLLEAKQALGYPL+PSDSYGDDNPAKQFDTLLYLAFQHPSCERT
Sbjct: 121 LPSSRLNNADKTWMDEYLLEAKQALGYPLDPSDSYGDDNPAKQFDTLLYLAFQHPSCERT 180
Query: 181 KARHIRSGHSRLLFLGQYVIELALAEYFLQRYPRESPGPMRERVFALIGKRNLPKWIKAA 240
KARHIRSGHSRLLFLGQYVIELALAEYFL RYPRESPGPMRERVFALIGKRNLPKWIKAA
Sbjct: 181 KARHIRSGHSRLLFLGQYVIELALAEYFLLRYPRESPGPMRERVFALIGKRNLPKWIKAA 240
Query: 241 SLQNLIFPYDDMDKMIRKDREPPVKIDRPEETLRSWHLIRVNVQAIIAAPGGLVPSGQFF 300
SLQNLIFPYDDMDKMIRKDREPPVK
Sbjct: 241 SLQNLIFPYDDMDKMIRKDREPPVK----------------------------------- 300
Query: 301 VNLKPHILSSNLVPAGYGRHSMNLASLSVFWALFGAIYLCFGMPEVYRVLFEVFGMDPDA 360
SVFWALFGAIYLCFGMPEVYRVLFEVFGMDPDA
Sbjct: 301 ---------------------------SVFWALFGAIYLCFGMPEVYRVLFEVFGMDPDA 360
Query: 361 EECEPRLRRQLEDVDYVSVEFEDKRISWQDM----PPEDALFAHPRLFRACVPPGMHRFR 420
EECEPRLRRQLEDVDYVSVEFEDKRISWQDM PPEDALFAHPRLFRACVPPGMHRFR
Sbjct: 361 EECEPRLRRQLEDVDYVSVEFEDKRISWQDMISYKPPEDALFAHPRLFRACVPPGMHRFR 420
Query: 421 GNIWDYDSRPQVMQALGYPVPVADKIPDITEARNIELGLGLQLCFLHPSKHKFEHPRFCY 480
GNIWDYDSRPQVMQALGYP+PV DKIPDITEARNIELGLGLQLCFLHPSKHKFEHPRFCY
Sbjct: 421 GNIWDYDSRPQVMQALGYPLPVVDKIPDITEARNIELGLGLQLCFLHPSKHKFEHPRFCY 480
Query: 481 ERLEYLGQKIQDIVMAERLLMKHLDAPGKWLQEKHRRLLMNKFCGRYLREKYLHKLIIYS 540
ERLEYLGQKIQDIVMAERLLMKHLDAPGKWLQEKHRRLLMNKFCGRYLREKYLHKLIIYS
Sbjct: 481 ERLEYLGQKIQDIVMAERLLMKHLDAPGKWLQEKHRRLLMNKFCGRYLREKYLHKLIIYS 534
Query: 541 EKVQDAYENNRRLRNPATTAVQQALHGLSYVVYGKPDVRRLMFEVFDFEQIQPKAV 593
EKVQDAYENNRRLRNPATTAVQQALHGLSYVVYGKPDVRRLMFEVFDFEQIQPKAV
Sbjct: 541 EKVQDAYENNRRLRNPATTAVQQALHGLSYVVYGKPDVRRLMFEVFDFEQIQPKAV 534
BLAST of ClCG01G017380.2 vs. ExPASy TrEMBL
Match:
A0A0A0KGG7 (RNase III domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G494980 PE=4 SV=1)
HSP 1 Score: 1026.9 bits (2654), Expect = 3.3e-296
Identity = 514/596 (86.24%), Postives = 525/596 (88.09%), Query Frame = 0
Query: 1 MELSSSFVKLSSPSPNYSFSSSLTPFIVKIHPNHPIFPNPSSANLRIFAVAIDPQQELPK 60
MELSSSFVKLSSPS NYSFSSSLTPFIVKIHPNHPIFPNPSSANLR+FAVA+DPQQELPK
Sbjct: 1 MELSSSFVKLSSPS-NYSFSSSLTPFIVKIHPNHPIFPNPSSANLRVFAVAVDPQQELPK 60
Query: 61 NNPQRLLKELAERKRATSPKKKVPPRRFILRPPLDDKKLAERFLNSPQLTLKSFPLLSSC 120
NNPQRLLKELAERKRATSPKKKVPPRRFILRPPLDDK+LAERFLNSPQLTLKSFPLLSSC
Sbjct: 61 NNPQRLLKELAERKRATSPKKKVPPRRFILRPPLDDKRLAERFLNSPQLTLKSFPLLSSC 120
Query: 121 LPSSRLNNADKTWIDEYLLEAKQALGYPLEPSDSYGDDNPAKQFDTLLYLAFQHPSCERT 180
LPSSRLNNADKTW+DEYLLEAKQALGYPLEPSDSYGDDNPAKQFDTLLYLAFQHPSCERT
Sbjct: 121 LPSSRLNNADKTWMDEYLLEAKQALGYPLEPSDSYGDDNPAKQFDTLLYLAFQHPSCERT 180
Query: 181 KARHIRSGHSRLLFLGQYVIELALAEYFLQRYPRESPGPMRERVFALIGKRNLPKWIKAA 240
KARHIRSGHSRL FLGQYV+ELALAEYFLQRYPRESPGPMRERVFALIGKRNLPKWIKAA
Sbjct: 181 KARHIRSGHSRLFFLGQYVLELALAEYFLQRYPRESPGPMRERVFALIGKRNLPKWIKAA 240
Query: 241 SLQNLIFPYDDMDKMIRKDREPPVKIDRPEETLRSWHLIRVNVQAIIAAPGGLVPSGQFF 300
SLQNLIFPYDDMDK+IRKDREPPVK
Sbjct: 241 SLQNLIFPYDDMDKIIRKDREPPVK----------------------------------- 300
Query: 301 VNLKPHILSSNLVPAGYGRHSMNLASLSVFWALFGAIYLCFGMPEVYRVLFEVFGMDPDA 360
SVFWALFGAIYLCFGMPEVYRVLFEVFGMDPDA
Sbjct: 301 ---------------------------SVFWALFGAIYLCFGMPEVYRVLFEVFGMDPDA 360
Query: 361 EECEPRLRRQLEDVDYVSVEFEDKRISWQDM----PPEDALFAHPRLFRACVPPGMHRFR 420
+ECEPRLRRQLEDVDYVSVEFEDKRI WQDM PPEDALFAHPRLFRACVPPGMHRFR
Sbjct: 361 KECEPRLRRQLEDVDYVSVEFEDKRIGWQDMVSYKPPEDALFAHPRLFRACVPPGMHRFR 420
Query: 421 GNIWDYDSRPQVMQALGYPVPVADKIPDITEARNIELGLGLQLCFLHPSKHKFEHPRFCY 480
GNIWDYDSRPQVMQALGYP+PV DKIPDITEARNIELGLGLQLCFLHPSKHKFEHPRFCY
Sbjct: 421 GNIWDYDSRPQVMQALGYPLPVTDKIPDITEARNIELGLGLQLCFLHPSKHKFEHPRFCY 480
Query: 481 ERLEYLGQKIQDIVMAERLLMKHLDAPGKWLQEKHRRLLMNKFCGRYLREKYLHKLIIYS 540
ERLEYLGQKIQDIVMAERLLMKHLDAPG+WLQ KHRRLLMNKFCGRYLRE+YLHKLIIYS
Sbjct: 481 ERLEYLGQKIQDIVMAERLLMKHLDAPGRWLQVKHRRLLMNKFCGRYLRERYLHKLIIYS 533
Query: 541 EKVQDAYENNRRLRNPATTAVQQALHGLSYVVYGKPDVRRLMFEVFDFEQIQPKAV 593
EKVQDAYENNRRLRNPATTAVQQALHGLSYVVYGKPDVRR+MFEVFDFEQIQPKAV
Sbjct: 541 EKVQDAYENNRRLRNPATTAVQQALHGLSYVVYGKPDVRRIMFEVFDFEQIQPKAV 533
BLAST of ClCG01G017380.2 vs. ExPASy TrEMBL
Match:
A0A6J1BVK6 (ribonuclease III domain-containing protein RNC1, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111005910 PE=4 SV=1)
HSP 1 Score: 1023.8 bits (2646), Expect = 2.8e-295
Identity = 511/596 (85.74%), Postives = 525/596 (88.09%), Query Frame = 0
Query: 1 MELSSSFVKLSSPSPNYSFSSSLTPFIVKIHPNHPIFPNPSSANLRIFAVAIDPQQELPK 60
MELSSSFV+L+SP+PNYSFSSSLTPF KI+PN+P FPNP+S NLRIFAVA+DPQQELPK
Sbjct: 1 MELSSSFVQLASPTPNYSFSSSLTPFHFKIYPNNPSFPNPTSGNLRIFAVAVDPQQELPK 60
Query: 61 NNPQRLLKELAERKRATSPKKKVPPRRFILRPPLDDKKLAERFLNSPQLTLKSFPLLSSC 120
NNPQRLLKELAERKRATSPKK+VPPRRFILRPPLDDKKLAERFLNSPQLTLKSFPLLSSC
Sbjct: 61 NNPQRLLKELAERKRATSPKKRVPPRRFILRPPLDDKKLAERFLNSPQLTLKSFPLLSSC 120
Query: 121 LPSSRLNNADKTWIDEYLLEAKQALGYPLEPSDSYGDDNPAKQFDTLLYLAFQHPSCERT 180
LPSSRLNNADKTW+DEYLLEAKQALGYPLEPSD+YGDDNPAKQFDTLLYLAFQHPSCERT
Sbjct: 121 LPSSRLNNADKTWMDEYLLEAKQALGYPLEPSDNYGDDNPAKQFDTLLYLAFQHPSCERT 180
Query: 181 KARHIRSGHSRLLFLGQYVIELALAEYFLQRYPRESPGPMRERVFALIGKRNLPKWIKAA 240
KARHIRSGHSRLLFLGQYV+ELALAEYFLQRYPRESPGPMRERVFALIGKR+LPKWIKAA
Sbjct: 181 KARHIRSGHSRLLFLGQYVLELALAEYFLQRYPRESPGPMRERVFALIGKRSLPKWIKAA 240
Query: 241 SLQNLIFPYDDMDKMIRKDREPPVKIDRPEETLRSWHLIRVNVQAIIAAPGGLVPSGQFF 300
SLQNLIFPYDDMDKMIRKDREPPVK
Sbjct: 241 SLQNLIFPYDDMDKMIRKDREPPVK----------------------------------- 300
Query: 301 VNLKPHILSSNLVPAGYGRHSMNLASLSVFWALFGAIYLCFGMPEVYRVLFEVFGMDPDA 360
SVFWALFGAIYLCFGMPEVYRVLFEVFGMDPDA
Sbjct: 301 ---------------------------SVFWALFGAIYLCFGMPEVYRVLFEVFGMDPDA 360
Query: 361 EECEPRLRRQLEDVDYVSVEFEDKRISWQDM----PPEDALFAHPRLFRACVPPGMHRFR 420
EECEPRLRRQLEDVDYVSVEFEDK+ISWQDM PPEDALFAHPRLFRACVPPGMHRFR
Sbjct: 361 EECEPRLRRQLEDVDYVSVEFEDKKISWQDMVAYKPPEDALFAHPRLFRACVPPGMHRFR 420
Query: 421 GNIWDYDSRPQVMQALGYPVPVADKIPDITEARNIELGLGLQLCFLHPSKHKFEHPRFCY 480
GNIWDYDSRPQVMQALGYPVPV+DKIPDITEARNIELGLGLQLCFLHPSKHKFEHPRFCY
Sbjct: 421 GNIWDYDSRPQVMQALGYPVPVSDKIPDITEARNIELGLGLQLCFLHPSKHKFEHPRFCY 480
Query: 481 ERLEYLGQKIQDIVMAERLLMKHLDAPGKWLQEKHRRLLMNKFCGRYLREKYLHKLIIYS 540
ERLEYLGQKIQDIVMAERLLMKHLDAPGKWLQEKHRRLLMNKFCGRYLREKYLHKLIIYS
Sbjct: 481 ERLEYLGQKIQDIVMAERLLMKHLDAPGKWLQEKHRRLLMNKFCGRYLREKYLHKLIIYS 534
Query: 541 EKVQDAYENNRRLRNPATTAVQQALHGLSYVVYGKPDVRRLMFEVFDFEQIQPKAV 593
EKVQDAYENNRRLRNPATTAVQQALHGLSY VYGKPDVRRLMFEVFDFEQIQPKAV
Sbjct: 541 EKVQDAYENNRRLRNPATTAVQQALHGLSYAVYGKPDVRRLMFEVFDFEQIQPKAV 534
BLAST of ClCG01G017380.2 vs. ExPASy TrEMBL
Match:
A0A6J1GEC3 (ribonuclease III domain-containing protein RNC1, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111453180 PE=4 SV=1)
HSP 1 Score: 1020.4 bits (2637), Expect = 3.0e-294
Identity = 509/596 (85.40%), Postives = 521/596 (87.42%), Query Frame = 0
Query: 1 MELSSSFVKLSSPSPNYSFSSSLTPFIVKIHPNHPIFPNPSSANLRIFAVAIDPQQELPK 60
MELSS FVKLSSP+PN+SFSSSLTPF+VKIHPN+P NPSS LRIFAVA+DPQQELPK
Sbjct: 1 MELSSCFVKLSSPTPNFSFSSSLTPFVVKIHPNNPSLSNPSSGGLRIFAVAVDPQQELPK 60
Query: 61 NNPQRLLKELAERKRATSPKKKVPPRRFILRPPLDDKKLAERFLNSPQLTLKSFPLLSSC 120
NNPQRLLKEL ERKRATSPKKKVPPRRFILRPPLDDKKLAERFLNSPQLTLKSFPLLSSC
Sbjct: 61 NNPQRLLKELEERKRATSPKKKVPPRRFILRPPLDDKKLAERFLNSPQLTLKSFPLLSSC 120
Query: 121 LPSSRLNNADKTWIDEYLLEAKQALGYPLEPSDSYGDDNPAKQFDTLLYLAFQHPSCERT 180
LPSSRLNNADKTW+DEYLLEAKQALGYPLEPSDSYGDDNPAKQFDTLLYLAFQHPSCERT
Sbjct: 121 LPSSRLNNADKTWMDEYLLEAKQALGYPLEPSDSYGDDNPAKQFDTLLYLAFQHPSCERT 180
Query: 181 KARHIRSGHSRLLFLGQYVIELALAEYFLQRYPRESPGPMRERVFALIGKRNLPKWIKAA 240
KARHIRSGHSRLLFLGQYVIELALAEYFLQRYPRESPGPMRERVFALIGKRNLP+WIKAA
Sbjct: 181 KARHIRSGHSRLLFLGQYVIELALAEYFLQRYPRESPGPMRERVFALIGKRNLPQWIKAA 240
Query: 241 SLQNLIFPYDDMDKMIRKDREPPVKIDRPEETLRSWHLIRVNVQAIIAAPGGLVPSGQFF 300
SLQNLIFPYDDMDKM+RKDREPPVK
Sbjct: 241 SLQNLIFPYDDMDKMVRKDREPPVK----------------------------------- 300
Query: 301 VNLKPHILSSNLVPAGYGRHSMNLASLSVFWALFGAIYLCFGMPEVYRVLFEVFGMDPDA 360
SVFWALFGAIYLCFGMPEVYRVLFEVFGMDPDA
Sbjct: 301 ---------------------------SVFWALFGAIYLCFGMPEVYRVLFEVFGMDPDA 360
Query: 361 EECEPRLRRQLEDVDYVSVEFEDKRISWQDM----PPEDALFAHPRLFRACVPPGMHRFR 420
EECEPRLRRQLEDVDYVSVEFEDK+ISWQDM PPEDALFAHPRLFRACVPPGMHRFR
Sbjct: 361 EECEPRLRRQLEDVDYVSVEFEDKKISWQDMVAYKPPEDALFAHPRLFRACVPPGMHRFR 420
Query: 421 GNIWDYDSRPQVMQALGYPVPVADKIPDITEARNIELGLGLQLCFLHPSKHKFEHPRFCY 480
GNIWDYDSRPQVMQALGYPVPV DKIP+ITEARNIELGLGLQLCFLHPSKHKFEHPRFCY
Sbjct: 421 GNIWDYDSRPQVMQALGYPVPVTDKIPEITEARNIELGLGLQLCFLHPSKHKFEHPRFCY 480
Query: 481 ERLEYLGQKIQDIVMAERLLMKHLDAPGKWLQEKHRRLLMNKFCGRYLREKYLHKLIIYS 540
ERLEYLGQKIQDIVMAERLLMKHLDAPGKWLQEKHRRLLMNKFCGRYLREKYLHKLI+YS
Sbjct: 481 ERLEYLGQKIQDIVMAERLLMKHLDAPGKWLQEKHRRLLMNKFCGRYLREKYLHKLIVYS 534
Query: 541 EKVQDAYENNRRLRNPATTAVQQALHGLSYVVYGKPDVRRLMFEVFDFEQIQPKAV 593
E+VQDAYENNRRLRNPATTAVQQALHGLSY VYGKPDVRRLMFEVFDFEQIQPKAV
Sbjct: 541 EQVQDAYENNRRLRNPATTAVQQALHGLSYTVYGKPDVRRLMFEVFDFEQIQPKAV 534
BLAST of ClCG01G017380.2 vs. ExPASy TrEMBL
Match:
A0A6J1IRK8 (ribonuclease III domain-containing protein RNC1, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111477828 PE=4 SV=1)
HSP 1 Score: 1014.2 bits (2621), Expect = 2.2e-292
Identity = 505/596 (84.73%), Postives = 521/596 (87.42%), Query Frame = 0
Query: 1 MELSSSFVKLSSPSPNYSFSSSLTPFIVKIHPNHPIFPNPSSANLRIFAVAIDPQQELPK 60
MELSS FVKLSSP+PN+SFSSSLTPF+VKIHPN+P NPSS +LRIFAVA+DP+QELPK
Sbjct: 1 MELSSCFVKLSSPTPNFSFSSSLTPFVVKIHPNNPSLSNPSSGSLRIFAVAVDPRQELPK 60
Query: 61 NNPQRLLKELAERKRATSPKKKVPPRRFILRPPLDDKKLAERFLNSPQLTLKSFPLLSSC 120
NNPQRLLKEL ERKRATSPKKKVPPRRFILRPPLDDKKLAERFLNSPQLTLKSFPLLSSC
Sbjct: 61 NNPQRLLKELEERKRATSPKKKVPPRRFILRPPLDDKKLAERFLNSPQLTLKSFPLLSSC 120
Query: 121 LPSSRLNNADKTWIDEYLLEAKQALGYPLEPSDSYGDDNPAKQFDTLLYLAFQHPSCERT 180
LPSSRLNNADKTW++EYLLEAKQALGYPLEP DSYGDDNPAKQFDTLLYLAFQHPSCERT
Sbjct: 121 LPSSRLNNADKTWMEEYLLEAKQALGYPLEPFDSYGDDNPAKQFDTLLYLAFQHPSCERT 180
Query: 181 KARHIRSGHSRLLFLGQYVIELALAEYFLQRYPRESPGPMRERVFALIGKRNLPKWIKAA 240
KARHIRSGHSRLLFLGQYVIELALAEYFLQRYPRESPGPMRERVFALIGKRNLP+WIKAA
Sbjct: 181 KARHIRSGHSRLLFLGQYVIELALAEYFLQRYPRESPGPMRERVFALIGKRNLPQWIKAA 240
Query: 241 SLQNLIFPYDDMDKMIRKDREPPVKIDRPEETLRSWHLIRVNVQAIIAAPGGLVPSGQFF 300
SLQNLIFPYDDMDKM+RKDREPPVK
Sbjct: 241 SLQNLIFPYDDMDKMVRKDREPPVK----------------------------------- 300
Query: 301 VNLKPHILSSNLVPAGYGRHSMNLASLSVFWALFGAIYLCFGMPEVYRVLFEVFGMDPDA 360
SVFWALFGAIYLCFGMPEVYRVLFEVFGMDPDA
Sbjct: 301 ---------------------------SVFWALFGAIYLCFGMPEVYRVLFEVFGMDPDA 360
Query: 361 EECEPRLRRQLEDVDYVSVEFEDKRISWQDM----PPEDALFAHPRLFRACVPPGMHRFR 420
EECEPRLRRQLEDVDYVSVEFEDK+ISWQDM PPEDALFAHPRLFRACVPPGMHRFR
Sbjct: 361 EECEPRLRRQLEDVDYVSVEFEDKKISWQDMVAYKPPEDALFAHPRLFRACVPPGMHRFR 420
Query: 421 GNIWDYDSRPQVMQALGYPVPVADKIPDITEARNIELGLGLQLCFLHPSKHKFEHPRFCY 480
GNIWDYDSRPQVMQALGYPVPV DKIP+ITEARNIELGLGLQLCFLHPSKHKFEHPRFCY
Sbjct: 421 GNIWDYDSRPQVMQALGYPVPVTDKIPEITEARNIELGLGLQLCFLHPSKHKFEHPRFCY 480
Query: 481 ERLEYLGQKIQDIVMAERLLMKHLDAPGKWLQEKHRRLLMNKFCGRYLREKYLHKLIIYS 540
ERLEYLGQKIQDIVMAERLLMKHLDAPGKWLQEKHRRLLMNKFCGRYLREKYLHKLI+YS
Sbjct: 481 ERLEYLGQKIQDIVMAERLLMKHLDAPGKWLQEKHRRLLMNKFCGRYLREKYLHKLIVYS 534
Query: 541 EKVQDAYENNRRLRNPATTAVQQALHGLSYVVYGKPDVRRLMFEVFDFEQIQPKAV 593
E+VQDAYENNRRLRNPATTAVQQ+LHGLSY VYGKPDVRRLMFEVFDFEQIQPKAV
Sbjct: 541 EQVQDAYENNRRLRNPATTAVQQSLHGLSYTVYGKPDVRRLMFEVFDFEQIQPKAV 534
BLAST of ClCG01G017380.2 vs. TAIR 10
Match:
AT4G37510.1 (Ribonuclease III family protein )
HSP 1 Score: 861.7 bits (2225), Expect = 3.5e-250
Identity = 433/594 (72.90%), Postives = 475/594 (79.97%), Query Frame = 0
Query: 4 SSSFVKL-SSPSPNYSFSSSLTPFIVKIHPNHPIFPNPSSANLRIFAVAIDPQQELPKNN 63
SSS +++ SS +P SFSSS++ F K I NLRI A Q LP+++
Sbjct: 9 SSSLLRICSSSAPEISFSSSISQFPSK---TQSILTKSRFQNLRICASVTAETQGLPRDS 68
Query: 64 PQRLLKELAERKRATSPKKKVPPRRFILRPPLDDKKLAERFLNSPQLTLKSFPLLSSCLP 123
PQRLLKELA+RK AT PKKKVPP+RFILRPPLDDKKLAERFLNSPQL+LKSFPLLSSCLP
Sbjct: 69 PQRLLKELAQRKTATGPKKKVPPKRFILRPPLDDKKLAERFLNSPQLSLKSFPLLSSCLP 128
Query: 124 SSRLNNADKTWIDEYLLEAKQALGYPLEPSDSYGDDNPAKQFDTLLYLAFQHPSCERTKA 183
SS+LNNADKTWIDEYLLE KQALGY LEPS+S GDDNPAK FDTLLYLAFQHPSC+R +A
Sbjct: 129 SSKLNNADKTWIDEYLLEVKQALGYSLEPSESLGDDNPAKHFDTLLYLAFQHPSCDRARA 188
Query: 184 RHIRSGHSRLLFLGQYVIELALAEYFLQRYPRESPGPMRERVFALIGKRNLPKWIKAASL 243
RH+++GHSRL FLGQYV+ELAL E+FLQRYPRESPGPMRERVFALIGKR LPKWIKAASL
Sbjct: 189 RHVKNGHSRLWFLGQYVLELALTEFFLQRYPRESPGPMRERVFALIGKRYLPKWIKAASL 248
Query: 244 QNLIFPYDDMDKMIRKDREPPVKIDRPEETLRSWHLIRVNVQAIIAAPGGLVPSGQFFVN 303
QNLIFPYDDMDK+IRK+REPPVK
Sbjct: 249 QNLIFPYDDMDKLIRKEREPPVK------------------------------------- 308
Query: 304 LKPHILSSNLVPAGYGRHSMNLASLSVFWALFGAIYLCFGMPEVYRVLFEVFGMDPDAEE 363
SVFWALFGAIYLCFGMPEVYRVLFEVFGMDPDA+E
Sbjct: 309 -------------------------SVFWALFGAIYLCFGMPEVYRVLFEVFGMDPDADE 368
Query: 364 CEPRLRRQLEDVDYVSVEFEDKRISWQDM----PPEDALFAHPRLFRACVPPGMHRFRGN 423
C+PR RRQLEDVDYVSVEFE K++ WQD+ PPEDALFAHPRLFRACVPPGMHRFRGN
Sbjct: 369 CQPRSRRQLEDVDYVSVEFEGKKLGWQDIATYKPPEDALFAHPRLFRACVPPGMHRFRGN 428
Query: 424 IWDYDSRPQVMQALGYPVPVADKIPDITEARNIELGLGLQLCFLHPSKHKFEHPRFCYER 483
IWD+DS+P+VMQ LGYP+ + D+I +ITEARNIELGLGLQLCFLHPSKHKFEHPRFC+ER
Sbjct: 429 IWDFDSKPKVMQTLGYPLTMNDRIKEITEARNIELGLGLQLCFLHPSKHKFEHPRFCFER 488
Query: 484 LEYLGQKIQDIVMAERLLMKHLDAPGKWLQEKHRRLLMNKFCGRYLREKYLHKLIIYSEK 543
LEY+GQKIQDI MAERLLMKHLDAPGKWLQEKHRRLLMNKFCGRYLREK LH IIYSE+
Sbjct: 489 LEYVGQKIQDIAMAERLLMKHLDAPGKWLQEKHRRLLMNKFCGRYLREKRLHNFIIYSEE 537
Query: 544 VQDAYENNRRLRNPATTAVQQALHGLSYVVYGKPDVRRLMFEVFDFEQIQPKAV 593
V D YE+NRRLRNPATTAVQQA+HGL+Y +YGKPDVRRLMFEVFDFEQIQPKAV
Sbjct: 549 VHDRYEHNRRLRNPATTAVQQAIHGLAYTIYGKPDVRRLMFEVFDFEQIQPKAV 537
BLAST of ClCG01G017380.2 vs. TAIR 10
Match:
AT2G48121.2 (LOCATED IN: mitochondrion; BEST Arabidopsis thaliana protein match is: Ribonuclease III family protein (TAIR:AT4G37510.1). )
HSP 1 Score: 141.0 bits (354), Expect = 3.1e-33
Identity = 66/77 (85.71%), Postives = 71/77 (92.21%), Query Frame = 0
Query: 516 MNKFCGRYLREKYLHKLIIYSEKVQDAYENNRRLRNPATTAVQQALHGLSYVVYGKPDVR 575
MNKFCGRYLREK LH IIYSE+V D YE+NRRLRNPATTAVQQA+HGL+Y +YGKPDVR
Sbjct: 1 MNKFCGRYLREKRLHNFIIYSEEVHDRYEHNRRLRNPATTAVQQAIHGLAYTIYGKPDVR 60
Query: 576 RLMFEVFDFEQIQPKAV 593
RLMFEVFDFEQIQPKAV
Sbjct: 61 RLMFEVFDFEQIQPKAV 77
BLAST of ClCG01G017380.2 vs. TAIR 10
Match:
AT2G48121.1 (BEST Arabidopsis thaliana protein match is: Ribonuclease III family protein (TAIR:AT4G37510.1). )
HSP 1 Score: 105.1 bits (261), Expect = 1.9e-22
Identity = 48/57 (84.21%), Postives = 54/57 (94.74%), Query Frame = 0
Query: 536 SEKVQDAYENNRRLRNPATTAVQQALHGLSYVVYGKPDVRRLMFEVFDFEQIQPKAV 593
+E+V D YE+NRRLRNPATTAVQQA+HGL+Y +YGKPDVRRLMFEVFDFEQIQPKAV
Sbjct: 19 TEEVHDRYEHNRRLRNPATTAVQQAIHGLAYTIYGKPDVRRLMFEVFDFEQIQPKAV 75
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_038883471.1 | 4.8e-302 | 88.09 | ribonuclease III domain-containing protein RNC1, chloroplastic [Benincasa hispid... | [more] |
XP_008440359.1 | 9.1e-301 | 87.75 | PREDICTED: ribonuclease III domain-containing protein RNC1, chloroplastic [Cucum... | [more] |
XP_004141878.1 | 6.7e-296 | 86.24 | ribonuclease III domain-containing protein RNC1, chloroplastic isoform X1 [Cucum... | [more] |
XP_022133289.1 | 5.7e-295 | 85.74 | ribonuclease III domain-containing protein RNC1, chloroplastic [Momordica charan... | [more] |
XP_023543359.1 | 4.8e-294 | 85.40 | ribonuclease III domain-containing protein RNC1, chloroplastic-like [Cucurbita p... | [more] |
Match Name | E-value | Identity | Description | |
Q9SZV0 | 4.9e-249 | 72.90 | Ribonuclease III domain-containing protein RNC1, chloroplastic OS=Arabidopsis th... | [more] |
Q8S1Z0 | 5.8e-226 | 70.22 | Ribonuclease III domain-containing protein RNC1, chloroplastic OS=Oryza sativa s... | [more] |
A6YSL1 | 1.0e-225 | 66.84 | Ribonuclease III domain-containing protein RNC1, chloroplastic OS=Zea mays OX=45... | [more] |
Q5L0Q3 | 2.7e-05 | 31.71 | Ribonuclease 3 OS=Geobacillus kaustophilus (strain HTA426) OX=235909 GN=rnc PE=3... | [more] |
A4IM67 | 2.7e-05 | 32.14 | Ribonuclease 3 OS=Geobacillus thermodenitrificans (strain NG80-2) OX=420246 GN=r... | [more] |
Match Name | E-value | Identity | Description | |
A0A1S3B1J9 | 4.4e-301 | 87.75 | ribonuclease III domain-containing protein RNC1, chloroplastic OS=Cucumis melo O... | [more] |
A0A0A0KGG7 | 3.3e-296 | 86.24 | RNase III domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G494980 P... | [more] |
A0A6J1BVK6 | 2.8e-295 | 85.74 | ribonuclease III domain-containing protein RNC1, chloroplastic OS=Momordica char... | [more] |
A0A6J1GEC3 | 3.0e-294 | 85.40 | ribonuclease III domain-containing protein RNC1, chloroplastic-like OS=Cucurbita... | [more] |
A0A6J1IRK8 | 2.2e-292 | 84.73 | ribonuclease III domain-containing protein RNC1, chloroplastic-like OS=Cucurbita... | [more] |
Match Name | E-value | Identity | Description | |
AT4G37510.1 | 3.5e-250 | 72.90 | Ribonuclease III family protein | [more] |
AT2G48121.2 | 3.1e-33 | 85.71 | LOCATED IN: mitochondrion; BEST Arabidopsis thaliana protein match is: Ribonucle... | [more] |
AT2G48121.1 | 1.9e-22 | 84.21 | BEST Arabidopsis thaliana protein match is: Ribonuclease III family protein (TAI... | [more] |