Chy7G128620.1 (mRNA) Cucumber (hystrix) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAGCAAATCCAGCTCCTCCAATCGATTCATCTACGTTGCAGTTGGTTTGAATCAAATGGATTGGATACTTCTCCAGGACAGAAGCCTGTTGAGTCAAACTGTTGCACTGACATAGTTGGTGCCACAACCGAAACCTGCACCCAGGAGGCAAAAAAGCTGTTAAAAATAGAAGTTGGCGTAGAACGCGACATTCAGCTTTCAGAAGGAAAGAGCTGGGATGAAGGAGTTCATGGAGCCACCATGACTAGATTTGTAGAACCTGTTGTTCTAACTTAG ATGAAGCAAATCCAGCTCCTCCAATCGATTCATCTACGTTGCAGTTGGTTTGAATCAAATGGATTGGATACTTCTCCAGGACAGAAGCCTGTTGAGTCAAACTGTTGCACTGACATAGTTGGTGCCACAACCGAAACCTGCACCCAGGAGGCAAAAAAGCTGTTAAAAATAGAAGTTGGCGTAGAACGCGACATTCAGCTTTCAGAAGGAAAGAGCTGGGATGAAGGAGTTCATGGAGCCACCATGACTAGATTTGTAGAACCTGTTGTTCTAACTTAG ATGAAGCAAATCCAGCTCCTCCAATCGATTCATCTACGTTGCAGTTGGTTTGAATCAAATGGATTGGATACTTCTCCAGGACAGAAGCCTGTTGAGTCAAACTGTTGCACTGACATAGTTGGTGCCACAACCGAAACCTGCACCCAGGAGGCAAAAAAGCTGTTAAAAATAGAAGTTGGCGTAGAACGCGACATTCAGCTTTCAGAAGGAAAGAGCTGGGATGAAGGAGTTCATGGAGCCACCATGACTAGATTTGTAGAACCTGTTGTTCTAACTTAG MKQIQLLQSIHLRCSWFESNGLDTSPGQKPVESNCCTDIVGATTETCTQEAKKLLKIEVGVERDIQLSEGKSWDEGVHGATMTRFVEPVVLT* Homology
BLAST of Chy7G128620.1 vs. ExPASy TrEMBL
Match: A0A0A0L3B0 (N-acetyltransferase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G627270 PE=4 SV=1) HSP 1 Score: 153.7 bits (387), Expect = 3.8e-34 Identity = 73/75 (97.33%), Postives = 74/75 (98.67%), Query Frame = 0
BLAST of Chy7G128620.1 vs. ExPASy TrEMBL
Match: A0A1S4E4E1 (increased DNA methylation 1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103501805 PE=4 SV=1) HSP 1 Score: 144.8 bits (364), Expect = 1.8e-31 Identity = 70/75 (93.33%), Postives = 71/75 (94.67%), Query Frame = 0
BLAST of Chy7G128620.1 vs. ExPASy TrEMBL
Match: A0A5D3DWB4 (Increased DNA methylation 1 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold384G001060 PE=4 SV=1) HSP 1 Score: 144.8 bits (364), Expect = 1.8e-31 Identity = 70/75 (93.33%), Postives = 71/75 (94.67%), Query Frame = 0
BLAST of Chy7G128620.1 vs. ExPASy TrEMBL
Match: A0A6J1FC42 (LOW QUALITY PROTEIN: increased DNA methylation 1-like OS=Cucurbita moschata OX=3662 GN=LOC111442744 PE=4 SV=1) HSP 1 Score: 76.6 bits (187), Expect = 5.9e-11 Identity = 43/83 (51.81%), Postives = 53/83 (63.86%), Query Frame = 0
BLAST of Chy7G128620.1 vs. ExPASy TrEMBL
Match: A0A6J1IND9 (increased DNA methylation 1 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111476816 PE=4 SV=1) HSP 1 Score: 75.9 bits (185), Expect = 1.0e-10 Identity = 43/82 (52.44%), Postives = 52/82 (63.41%), Query Frame = 0
BLAST of Chy7G128620.1 vs. NCBI nr
Match: XP_004146095.1 (increased DNA methylation 1 [Cucumis sativus] >XP_031739517.1 increased DNA methylation 1 [Cucumis sativus] >XP_031739518.1 increased DNA methylation 1 [Cucumis sativus] >KAE8649828.1 hypothetical protein Csa_012099 [Cucumis sativus]) HSP 1 Score: 153 bits (386), Expect = 1.09e-40 Identity = 73/75 (97.33%), Postives = 74/75 (98.67%), Query Frame = 0
BLAST of Chy7G128620.1 vs. NCBI nr
Match: KAA0066774.1 (increased DNA methylation 1 isoform X1 [Cucumis melo var. makuwa] >TYK27921.1 increased DNA methylation 1 isoform X1 [Cucumis melo var. makuwa]) HSP 1 Score: 144 bits (363), Expect = 1.57e-39 Identity = 70/75 (93.33%), Postives = 71/75 (94.67%), Query Frame = 0
BLAST of Chy7G128620.1 vs. NCBI nr
Match: XP_016903085.1 (PREDICTED: increased DNA methylation 1 isoform X1 [Cucumis melo] >XP_016903087.1 PREDICTED: increased DNA methylation 1 isoform X2 [Cucumis melo]) HSP 1 Score: 144 bits (363), Expect = 1.37e-37 Identity = 70/75 (93.33%), Postives = 71/75 (94.67%), Query Frame = 0
BLAST of Chy7G128620.1 vs. NCBI nr
Match: XP_038898710.1 (increased DNA methylation 1 [Benincasa hispida] >XP_038898711.1 increased DNA methylation 1 [Benincasa hispida] >XP_038898712.1 increased DNA methylation 1 [Benincasa hispida]) HSP 1 Score: 117 bits (293), Expect = 3.83e-28 Identity = 59/81 (72.84%), Postives = 65/81 (80.25%), Query Frame = 0
BLAST of Chy7G128620.1 vs. NCBI nr
Match: XP_022936023.1 (LOW QUALITY PROTEIN: increased DNA methylation 1-like [Cucurbita moschata]) HSP 1 Score: 76.3 bits (186), Expect = 1.10e-13 Identity = 43/83 (51.81%), Postives = 53/83 (63.86%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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