Chy7G128620 (gene) Cucumber (hystrix) v1

Overview
NameChy7G128620
Typegene
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionIncreased DNA methylation 1 isoform X1
LocationchrH07: 284436 .. 284714 (-)
RNA-Seq ExpressionChy7G128620
SyntenyChy7G128620
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGCAAATCCAGCTCCTCCAATCGATTCATCTACGTTGCAGTTGGTTTGAATCAAATGGATTGGATACTTCTCCAGGACAGAAGCCTGTTGAGTCAAACTGTTGCACTGACATAGTTGGTGCCACAACCGAAACCTGCACCCAGGAGGCAAAAAAGCTGTTAAAAATAGAAGTTGGCGTAGAACGCGACATTCAGCTTTCAGAAGGAAAGAGCTGGGATGAAGGAGTTCATGGAGCCACCATGACTAGATTTGTAGAACCTGTTGTTCTAACTTAG

mRNA sequence

ATGAAGCAAATCCAGCTCCTCCAATCGATTCATCTACGTTGCAGTTGGTTTGAATCAAATGGATTGGATACTTCTCCAGGACAGAAGCCTGTTGAGTCAAACTGTTGCACTGACATAGTTGGTGCCACAACCGAAACCTGCACCCAGGAGGCAAAAAAGCTGTTAAAAATAGAAGTTGGCGTAGAACGCGACATTCAGCTTTCAGAAGGAAAGAGCTGGGATGAAGGAGTTCATGGAGCCACCATGACTAGATTTGTAGAACCTGTTGTTCTAACTTAG

Coding sequence (CDS)

ATGAAGCAAATCCAGCTCCTCCAATCGATTCATCTACGTTGCAGTTGGTTTGAATCAAATGGATTGGATACTTCTCCAGGACAGAAGCCTGTTGAGTCAAACTGTTGCACTGACATAGTTGGTGCCACAACCGAAACCTGCACCCAGGAGGCAAAAAAGCTGTTAAAAATAGAAGTTGGCGTAGAACGCGACATTCAGCTTTCAGAAGGAAAGAGCTGGGATGAAGGAGTTCATGGAGCCACCATGACTAGATTTGTAGAACCTGTTGTTCTAACTTAG

Protein sequence

MKQIQLLQSIHLRCSWFESNGLDTSPGQKPVESNCCTDIVGATTETCTQEAKKLLKIEVGVERDIQLSEGKSWDEGVHGATMTRFVEPVVLT*
Homology
BLAST of Chy7G128620 vs. ExPASy TrEMBL
Match: A0A0A0L3B0 (N-acetyltransferase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G627270 PE=4 SV=1)

HSP 1 Score: 153.7 bits (387), Expect = 3.8e-34
Identity = 73/75 (97.33%), Postives = 74/75 (98.67%), Query Frame = 0

Query: 18  ESNGLDTSPGQKPVESNCCTDIVGATTETCTQEAKKLLKIEVGVERDIQLSEGKSWDEGV 77
           ESNGLD SPGQKPVESNCCTDIVGATTETCTQEAKKLLK+EVGVERDIQLSEGKSWDEGV
Sbjct: 288 ESNGLDISPGQKPVESNCCTDIVGATTETCTQEAKKLLKVEVGVERDIQLSEGKSWDEGV 347

Query: 78  HGATMTRFVEPVVLT 93
           HGATMTRFVEPVVLT
Sbjct: 348 HGATMTRFVEPVVLT 362

BLAST of Chy7G128620 vs. ExPASy TrEMBL
Match: A0A1S4E4E1 (increased DNA methylation 1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103501805 PE=4 SV=1)

HSP 1 Score: 144.8 bits (364), Expect = 1.8e-31
Identity = 70/75 (93.33%), Postives = 71/75 (94.67%), Query Frame = 0

Query: 18   ESNGLDTSPGQKPVESNCCTDIVGATTETCTQEAKKLLKIEVGVERDIQLSEGKSWDEGV 77
            ESNGLDTSPGQK VESNCCTDIVGATTETC  EAKKLLK+EVGVE DIQLSEGKSWDEGV
Sbjct: 1300 ESNGLDTSPGQKFVESNCCTDIVGATTETCNHEAKKLLKVEVGVECDIQLSEGKSWDEGV 1359

Query: 78   HGATMTRFVEPVVLT 93
            HGATMTRFVEPVVLT
Sbjct: 1360 HGATMTRFVEPVVLT 1374

BLAST of Chy7G128620 vs. ExPASy TrEMBL
Match: A0A5D3DWB4 (Increased DNA methylation 1 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold384G001060 PE=4 SV=1)

HSP 1 Score: 144.8 bits (364), Expect = 1.8e-31
Identity = 70/75 (93.33%), Postives = 71/75 (94.67%), Query Frame = 0

Query: 18  ESNGLDTSPGQKPVESNCCTDIVGATTETCTQEAKKLLKIEVGVERDIQLSEGKSWDEGV 77
           ESNGLDTSPGQK VESNCCTDIVGATTETC  EAKKLLK+EVGVE DIQLSEGKSWDEGV
Sbjct: 286 ESNGLDTSPGQKFVESNCCTDIVGATTETCNHEAKKLLKVEVGVECDIQLSEGKSWDEGV 345

Query: 78  HGATMTRFVEPVVLT 93
           HGATMTRFVEPVVLT
Sbjct: 346 HGATMTRFVEPVVLT 360

BLAST of Chy7G128620 vs. ExPASy TrEMBL
Match: A0A6J1FC42 (LOW QUALITY PROTEIN: increased DNA methylation 1-like OS=Cucurbita moschata OX=3662 GN=LOC111442744 PE=4 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 5.9e-11
Identity = 43/83 (51.81%), Postives = 53/83 (63.86%), Query Frame = 0

Query: 19   SNGLDTSPGQKPVES--------NCCTDIVGATTETCTQEAKKLLKIE-VGVERDIQLSE 78
            +NG+DT  GQK ++S         CCTD VGA +ET   E  + L++E VG ERD+QL+E
Sbjct: 1291 TNGMDTCSGQKAIQSVQEQEPDGKCCTDEVGAASETHIHEGNESLEVEVVGTERDVQLTE 1350

Query: 79   GKSWDEGVHGATMTRFVEPVVLT 93
            GKSWD GV    MT FVE  VLT
Sbjct: 1351 GKSWD-GVRAVGMTGFVEAGVLT 1372

BLAST of Chy7G128620 vs. ExPASy TrEMBL
Match: A0A6J1IND9 (increased DNA methylation 1 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111476816 PE=4 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 1.0e-10
Identity = 43/82 (52.44%), Postives = 52/82 (63.41%), Query Frame = 0

Query: 19   SNGLDTSPGQKPVES-------NCCTDIVGATTETCTQEAKKLLKIE-VGVERDIQLSEG 78
            +N +DT  GQK ++S        CCTD VGA +ET   E  + L++E VG ERD+QLSEG
Sbjct: 1297 TNEMDTCSGQKSIQSVQEQSDGKCCTDEVGAASETHIHEGNESLEVEVVGTERDVQLSEG 1356

Query: 79   KSWDEGVHGATMTRFVEPVVLT 93
            KSWD GV    MT FVEP V T
Sbjct: 1357 KSWD-GVRAVGMTGFVEPGVQT 1377

BLAST of Chy7G128620 vs. NCBI nr
Match: XP_004146095.1 (increased DNA methylation 1 [Cucumis sativus] >XP_031739517.1 increased DNA methylation 1 [Cucumis sativus] >XP_031739518.1 increased DNA methylation 1 [Cucumis sativus] >KAE8649828.1 hypothetical protein Csa_012099 [Cucumis sativus])

HSP 1 Score: 153 bits (386), Expect = 1.09e-40
Identity = 73/75 (97.33%), Postives = 74/75 (98.67%), Query Frame = 0

Query: 18   ESNGLDTSPGQKPVESNCCTDIVGATTETCTQEAKKLLKIEVGVERDIQLSEGKSWDEGV 77
            ESNGLD SPGQKPVESNCCTDIVGATTETCTQEAKKLLK+EVGVERDIQLSEGKSWDEGV
Sbjct: 1319 ESNGLDISPGQKPVESNCCTDIVGATTETCTQEAKKLLKVEVGVERDIQLSEGKSWDEGV 1378

Query: 78   HGATMTRFVEPVVLT 92
            HGATMTRFVEPVVLT
Sbjct: 1379 HGATMTRFVEPVVLT 1393

BLAST of Chy7G128620 vs. NCBI nr
Match: KAA0066774.1 (increased DNA methylation 1 isoform X1 [Cucumis melo var. makuwa] >TYK27921.1 increased DNA methylation 1 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 144 bits (363), Expect = 1.57e-39
Identity = 70/75 (93.33%), Postives = 71/75 (94.67%), Query Frame = 0

Query: 18  ESNGLDTSPGQKPVESNCCTDIVGATTETCTQEAKKLLKIEVGVERDIQLSEGKSWDEGV 77
           ESNGLDTSPGQK VESNCCTDIVGATTETC  EAKKLLK+EVGVE DIQLSEGKSWDEGV
Sbjct: 286 ESNGLDTSPGQKFVESNCCTDIVGATTETCNHEAKKLLKVEVGVECDIQLSEGKSWDEGV 345

Query: 78  HGATMTRFVEPVVLT 92
           HGATMTRFVEPVVLT
Sbjct: 346 HGATMTRFVEPVVLT 360

BLAST of Chy7G128620 vs. NCBI nr
Match: XP_016903085.1 (PREDICTED: increased DNA methylation 1 isoform X1 [Cucumis melo] >XP_016903087.1 PREDICTED: increased DNA methylation 1 isoform X2 [Cucumis melo])

HSP 1 Score: 144 bits (363), Expect = 1.37e-37
Identity = 70/75 (93.33%), Postives = 71/75 (94.67%), Query Frame = 0

Query: 18   ESNGLDTSPGQKPVESNCCTDIVGATTETCTQEAKKLLKIEVGVERDIQLSEGKSWDEGV 77
            ESNGLDTSPGQK VESNCCTDIVGATTETC  EAKKLLK+EVGVE DIQLSEGKSWDEGV
Sbjct: 1300 ESNGLDTSPGQKFVESNCCTDIVGATTETCNHEAKKLLKVEVGVECDIQLSEGKSWDEGV 1359

Query: 78   HGATMTRFVEPVVLT 92
            HGATMTRFVEPVVLT
Sbjct: 1360 HGATMTRFVEPVVLT 1374

BLAST of Chy7G128620 vs. NCBI nr
Match: XP_038898710.1 (increased DNA methylation 1 [Benincasa hispida] >XP_038898711.1 increased DNA methylation 1 [Benincasa hispida] >XP_038898712.1 increased DNA methylation 1 [Benincasa hispida])

HSP 1 Score: 117 bits (293), Expect = 3.83e-28
Identity = 59/81 (72.84%), Postives = 65/81 (80.25%), Query Frame = 0

Query: 18   ESNGLDTSPGQKPVES------NCCTDIVGATTETCTQEAKKLLKIEVGVERDIQLSEGK 77
            ESNG++TS  QKPVES      NCCTDIVG  TET T EAK+ LK+EVG+E DIQ+SEGK
Sbjct: 1314 ESNGMNTSSAQKPVESVLQSDGNCCTDIVGGKTETRTHEAKEPLKVEVGIECDIQVSEGK 1373

Query: 78   SWDEGVHGATMTRFVEPVVLT 92
            SWDEGVH A MTRFVEPVVLT
Sbjct: 1374 SWDEGVHAAAMTRFVEPVVLT 1394

BLAST of Chy7G128620 vs. NCBI nr
Match: XP_022936023.1 (LOW QUALITY PROTEIN: increased DNA methylation 1-like [Cucurbita moschata])

HSP 1 Score: 76.3 bits (186), Expect = 1.10e-13
Identity = 43/83 (51.81%), Postives = 53/83 (63.86%), Query Frame = 0

Query: 19   SNGLDTSPGQKPVES--------NCCTDIVGATTETCTQEAKKLLKIEV-GVERDIQLSE 78
            +NG+DT  GQK ++S         CCTD VGA +ET   E  + L++EV G ERD+QL+E
Sbjct: 1291 TNGMDTCSGQKAIQSVQEQEPDGKCCTDEVGAASETHIHEGNESLEVEVVGTERDVQLTE 1350

Query: 79   GKSWDEGVHGATMTRFVEPVVLT 92
            GKSWD GV    MT FVE  VLT
Sbjct: 1351 GKSWD-GVRAVGMTGFVEAGVLT 1372

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0L3B03.8e-3497.33N-acetyltransferase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_... [more]
A0A1S4E4E11.8e-3193.33increased DNA methylation 1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103501805 P... [more]
A0A5D3DWB41.8e-3193.33Increased DNA methylation 1 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN... [more]
A0A6J1FC425.9e-1151.81LOW QUALITY PROTEIN: increased DNA methylation 1-like OS=Cucurbita moschata OX=3... [more]
A0A6J1IND91.0e-1052.44increased DNA methylation 1 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC1114768... [more]
Match NameE-valueIdentityDescription
XP_004146095.11.09e-4097.33increased DNA methylation 1 [Cucumis sativus] >XP_031739517.1 increased DNA meth... [more]
KAA0066774.11.57e-3993.33increased DNA methylation 1 isoform X1 [Cucumis melo var. makuwa] >TYK27921.1 in... [more]
XP_016903085.11.37e-3793.33PREDICTED: increased DNA methylation 1 isoform X1 [Cucumis melo] >XP_016903087.1... [more]
XP_038898710.13.83e-2872.84increased DNA methylation 1 [Benincasa hispida] >XP_038898711.1 increased DNA me... [more]
XP_022936023.11.10e-1351.81LOW QUALITY PROTEIN: increased DNA methylation 1-like [Cucurbita moschata][more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Chy7G128620.1Chy7G128620.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0046872 metal ion binding
molecular_function GO:0008080 N-acetyltransferase activity