Chy6G119500.1 (mRNA) Cucumber (hystrix) v1

Overview


Name	Chy6G119500.1
Type	mRNA
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	chloroplastic group IIB intron splicing facilitator CRS2-B, chloroplastic
Location	chrH06: 15001104 .. 15005039 (-)
Sequence length	918
RNA-Seq Expression	Chy6G119500.1
Synteny	Chy6G119500.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTGGGATTTCTACATTCTATCCAAAGAAACCAAGAAGCCCCTCCTTCCTCGTCAGGGAGCTTTGTGTGTGAGTGTGTTCAATTCCTCCTCATTTTCTTCTACGGCTTTAACAACATCCTCCACTTCTTCTGCTCGAAAATCCACTCTTCTTTTTACCAAACCATCCAATTTGCACGCAGGTTCAGTATTTTATTTTCTTCTTCTTCTTCTTCTTCTTCTTCGCTTTCGCTTTTTTCTCGTTTTTCCCCTTTAAAGTTCAACGAAACAACATGGTTCTTCAAGGGTTTTCTTTTTCCTGCTTTAGGTTTCAATGTTATATGCAGCATCCTTCCAAAGTGTCTCCTTATTTTCTAATTCGAGTAGTGCCCATTTCCATTTTCCTTCCACAAAGCCTCTGGTCTCCACCAGGCTCTCCGTACGAGCTTCATCGCCAGATAGTGATAATAATGGCCTTAAAGTGGAGTATACTCCTTGGCTTATTGTTGGACTGGGTAACCCAGGAAACAAGTATCATGGGACTCGGCACAATGTAATCAGACATTCTTTAACTCTGTGTAATGAACTTTTTGAATGAGTTTGGGATGGAATTTTCATAGTGTAGCAGTACTTTTAAACCAATCAAATTTCCTATCAAGTGCTTTCTATGAAGTGTTCCAAACTCACCCTCCCTTAACGTGCAGTGACACTAAATAACATTGCTCTTTTTGGCCTCTTGGGTTTGATTGTTCAGGTTGGTTTTGAAATGATTGATAGCATTGCTCAAGCGCAGGGAATTTTGATGAACACAATACAATCCAAAGCTCTAATTGGAATAGGTTGGCTTGTTTTCCCTTTCTATGTTATTGAATTGGGTTTCCATGTTACGTGGATTTGAAGTTCATTATGTTTCTTGAATAATCAGTACAGGTTCAATTGGAGAAGTACCAATTTTATTGGCAAAGCCTCAGACTTACATGAATTTCTGTGGAGAATCGGTTTGTCTTCTTGTCTCTCTTTTCTTCTGTTATTCAATAAGCATGGCACACAGCATACAGTTGAATGATGGTTTGTTTATTTCAGAAGTGTATGGATCCAAAGCTTAGTTTGAAGCAAAATATAAAAAGCTCACTGAGCTCCTTGTATGAGCTTATATTCATAGGGATAGATTGTTAGTTTTTTTCCATTGAAACAATTACATAGCATTAATGTCGCAGTTAGATAAGTATGTGGACAGGAGTTCTGTGGGTTTGGATATGTTTTACGCCTTTAGATGTTCTACTTAACCTTCAATTTTGTCTGAGTGTGATTGTTAGAGGCCCAAAGTCAACTGTGGTTTGCTCAAAGCGAACAAAATCTCTGATTGGATAGGTTTATTGTGATGATGGTCTGAAGATACTTAGATTTTTCATTTTTCTAACCTTACTGGTTACATATACTAGAAAACTCAGTTGATTCCTTATTAGATTTTGGATGAGGCTATAATATTGTAATTCCTACCATATCTGGCTGTATTTATTTGCACCACTTTATAGGTATGCACTCTATAGCGTTTTGTGGTAGAGCTTTGTTGTTTTGTAGCTAAGGATAGAAGCAAATTCTTTGAGGAAACCATTGTGATTGAACTATGACGTGGTTATTGTTGCCATCTACAAATAATTTACCTGATCTTATTAGATACATGGGGTTTCATCTCAAAATCAACTGGTAATGAGAGAAGTAACTCATCTATTTTAAAAATAAACAAATGTTGTGAGTGTCCCTTGATTTGTTCAATGCTAGATCCTCAAGATGTCCCCTCAAGATGAATCTTTGGATTCACCATTCTAGAATCAAATTCAATGTTTTGTTTCCGGATTGAATATTGAATGCTCGTTTGGCTTAATAAGCTAAAATAGCCGATTAGATACATGAAATTTCATCTCAAAACCAATTGGCAATGTTATGAGTAGTTGATCTCAATATCTTAAGAACCCTGCATATGGATGTTTTGTTCTACAGCTGCTAAGACTATGAATCTTTCCTTCATCAGTTGAATTATTTTTCCATAATGACGAGATAGTTATTCCCCTCACATCACTTTCTGCTTAAATTTTATAGGTTGGACCTCTTGCTGCTCATTACCAAATACCTTTACGGCACGTCTTGTTGGTATAATTTACAATTTCTCTTAGTAATCCTTATTTGTTACTGTACAAAATGACTAGATGAATGGAATTCTGTACATGCTTACCATTGTAGACTTATGATGAAATGAGCTTGCCAAATGGCGTTCTTAGGCTGCAGCCAAAAGGAGGACATGGCCATCATAATGGGTAGGTTTATGAAATATTATTTAATATCGGTTTCACTCTTATTTTTGTTCTAGTTTTAATTGGTACCTCATACTTTCAATTTTTCTAACCTTGTTATGTTGTTATGTACCTATGGTAATGTTTGGAAGTCCATTTGATATCACCACAACTGCTTCTCACTTAAAATCATCATGCTTGAGAGTAACATAAAAGTACATTAGGAAAATGTCAAAAGTATATAAAGTGCTTTACGAGAAAGTTTCTACAGAGTGCTTTTGGCCCAATTGCTGGACCAGCAAGCACACTTGACAACAGATTAAAAAATGTAGAACTAAAAATAAAATTAGTTTGTAATTTAGCACCTTCTACTGAAGGCCTTATAATTAAAATATCTTTTTAAAAGCACCCTCAAACATCTTTTAGTATAAGCACCTTGCTGTATTGTATATTTTATTGGGGCATGTGTTGGAACTTCTTTGACAAGCTTATTAAGTCATTAAGAAAATTGAAGCTCAATGGACTATTTCTTGTCGAAACTTCCCACTGAAGACTGTTAGCCCCCCTATTATTCACACTTACAAACGAAGGGGCACAAAAGGTAATAACCAGGTGACAGCTTAACCTATGAGGATTATGGAAGGAATATGTTGCTGTGGGACCCATGGGAAGGCATGGGAGTATATCCGAATGTTTTTGGGATTGCTGAAGGTAGGTCATATTTTGAGAAAAGTTGCAGAAACTTTGGAGGAGAAGGCCAGCATTCTCGAATTAGCTGGAGAGTCTTTCCTTTTATATTTTGATATTTCTTGTGTTATTTTCTGCTTTGTTTTTTTCCACTGTTTAGAGGATATCTACATGAACCTTGTTTCCTACTCTATTTCTATCAATATATAAATACAGAGTACTGTCTCTGTTCCTCTATTGTGTTGTTCTATTGTGTGTTGGGACGTTTCTGAGTGGCAGGTTTTTGGGATCCTAACAAAGACTTGATGAACGTGTTTCATATTAGCATTTTATAGTTGATTTGATTGGACATGCATTTTCCTTCGCTTATTAGCCATTCAACTTGGAAGTCATGTTCTTCTCTTATTTGTCATTTCATAGTTGAGAAATTTATGGCAGCGTGTGCATAAAAAGTTGTTATTGATTACATTAGTTATACAGGGTGAAGAGTGTAATGGGACACCTGGATGGTCGACGTGAGTTTCCTCGGCTATGCATCGGTATGCATCTCAGTTAACATTAGTTTGAAAATGTTCATTAAGTTTCTACTTCAGGAAGTGTAAACAACGACATTGCTCTTGTTATTACTATATCTAGGAATTGGAAATCCACCTGGGACTATGGACATGAAAGCTTTTCTCCTGCAGAAGTTCAGTTCAGTTGAGCGAAAACAGGTGAAACTTCCTTTGCGTTCTAATACTGTTCTGCTCTGCATTACTTCATACGTCGCAACCTGATGACTTCGAAGCTGTACTTGCCTGGTGGTAGAACACTATTGCTTAGTGCATTTTTCTTTTTTGACTTTTGTTTGTGCAACCCAACAGATCGATACAGCTCTTGAACAAGGGGTTGAGGCAGTGAGAACCCTTGCACTGAATGGATTTAGCCAAAGAGTAAACAGATTCAATTTGTCCCAGAAATACAAGTATCATAAGGTTTGA

mRNA sequence

ATGTGGGATTTCTACATTCTATCCAAAGAAACCAAGAAGCCCCTCCTTCCTCGTCAGGGAGCTTTGTGTGTGAGTGTGTTCAATTCCTCCTCATTTTCTTCTACGGCTTTAACAACATCCTCCACTTCTTCTGCTCGAAAATCCACTCTTCTTTTTACCAAACCATCCAATTTGCACGCAGCATCCTTCCAAAGTGTCTCCTTATTTTCTAATTCGAGTAGTGCCCATTTCCATTTTCCTTCCACAAAGCCTCTGGTCTCCACCAGGCTCTCCGTACGAGCTTCATCGCCAGATAGTGATAATAATGGCCTTAAAGTGGAGTATACTCCTTGGCTTATTGTTGGACTGGGTAACCCAGGAAACAAGTATCATGGGACTCGGCACAATGTTGGTTTTGAAATGATTGATAGCATTGCTCAAGCGCAGGGAATTTTGATGAACACAATACAATCCAAAGCTCTAATTGGAATAGGTTCAATTGGAGAAGTACCAATTTTATTGGCAAAGCCTCAGACTTACATGAATTTCTGTGGAGAATCGGTTGGACCTCTTGCTGCTCATTACCAAATACCTTTACGGCACGTCTTGTTGACTTATGATGAAATGAGCTTGCCAAATGGCGTTCTTAGGCTGCAGCCAAAAGGAGGACATGGCCATCATAATGGGGTGAAGAGTGTAATGGGACACCTGGATGGTCGACGTGAGTTTCCTCGGCTATGCATCGGAATTGGAAATCCACCTGGGACTATGGACATGAAAGCTTTTCTCCTGCAGAAGTTCAGTTCAGTTGAGCGAAAACAGATCGATACAGCTCTTGAACAAGGGGTTGAGGCAGTGAGAACCCTTGCACTGAATGGATTTAGCCAAAGAGTAAACAGATTCAATTTGTCCCAGAAATACAAGTATCATAAGGTTTGA

Coding sequence (CDS)

ATGTGGGATTTCTACATTCTATCCAAAGAAACCAAGAAGCCCCTCCTTCCTCGTCAGGGAGCTTTGTGTGTGAGTGTGTTCAATTCCTCCTCATTTTCTTCTACGGCTTTAACAACATCCTCCACTTCTTCTGCTCGAAAATCCACTCTTCTTTTTACCAAACCATCCAATTTGCACGCAGCATCCTTCCAAAGTGTCTCCTTATTTTCTAATTCGAGTAGTGCCCATTTCCATTTTCCTTCCACAAAGCCTCTGGTCTCCACCAGGCTCTCCGTACGAGCTTCATCGCCAGATAGTGATAATAATGGCCTTAAAGTGGAGTATACTCCTTGGCTTATTGTTGGACTGGGTAACCCAGGAAACAAGTATCATGGGACTCGGCACAATGTTGGTTTTGAAATGATTGATAGCATTGCTCAAGCGCAGGGAATTTTGATGAACACAATACAATCCAAAGCTCTAATTGGAATAGGTTCAATTGGAGAAGTACCAATTTTATTGGCAAAGCCTCAGACTTACATGAATTTCTGTGGAGAATCGGTTGGACCTCTTGCTGCTCATTACCAAATACCTTTACGGCACGTCTTGTTGACTTATGATGAAATGAGCTTGCCAAATGGCGTTCTTAGGCTGCAGCCAAAAGGAGGACATGGCCATCATAATGGGGTGAAGAGTGTAATGGGACACCTGGATGGTCGACGTGAGTTTCCTCGGCTATGCATCGGAATTGGAAATCCACCTGGGACTATGGACATGAAAGCTTTTCTCCTGCAGAAGTTCAGTTCAGTTGAGCGAAAACAGATCGATACAGCTCTTGAACAAGGGGTTGAGGCAGTGAGAACCCTTGCACTGAATGGATTTAGCCAAAGAGTAAACAGATTCAATTTGTCCCAGAAATACAAGTATCATAAGGTTTGA

Protein sequence

MWDFYILSKETKKPLLPRQGALCVSVFNSSSFSSTALTTSSTSSARKSTLLFTKPSNLHAASFQSVSLFSNSSSAHFHFPSTKPLVSTRLSVRASSPDSDNNGLKVEYTPWLIVGLGNPGNKYHGTRHNVGFEMIDSIAQAQGILMNTIQSKALIGIGSIGEVPILLAKPQTYMNFCGESVGPLAAHYQIPLRHVLLTYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRREFPRLCIGIGNPPGTMDMKAFLLQKFSSVERKQIDTALEQGVEAVRTLALNGFSQRVNRFNLSQKYKYHKV*

Homology

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BLAST of Chy6G119500.1 vs. ExPASy Swiss-Prot
Match: Q9LF14 (Chloroplastic group IIB intron splicing facilitator CRS2-B, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CRS2B PE=2 SV=1)

HSP 1 Score: 360.9 bits (925), Expect = 1.4e-98
Identity = 170/230 (73.91%), Postives = 199/230 (86.52%), Query Frame = 0


Query: 77  FHFPSTKPLV-STRLSVRASSPDSDNNGLKVEYTPWLIVGLGNPGNKYHGTRHNVGFEMI 136
           +HF + KP+    R  V +S+   +++  KVEYTPWLIVGLGNPGNKYHGTRHNVGFEMI
Sbjct: 11  YHFQTQKPVFRKQRFRVCSSTSGGEDDRFKVEYTPWLIVGLGNPGNKYHGTRHNVGFEMI 70

Query: 137 DSIAQAQGILMNTIQSKALIGIGSIGEVPILLAKPQTYMNFCGESVGPLAAHYQIPLRHV 196
           D +A+ +G+LMNTIQSKALIGIG+I +VPILLAKPQTYMNF GESVG LA+HY++PLRH+
Sbjct: 71  DVLARKEGVLMNTIQSKALIGIGAIEDVPILLAKPQTYMNFSGESVGSLASHYRVPLRHI 130

Query: 197 LLTYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRREFPRLCIGIGNPPGTMDMKAF 256
           L+ YDEM+LPNGVLRLQPKGG G+HNGVKSVMGHLDGRR FPRL IGIG PPG MDMKAF
Sbjct: 131 LMIYDEMALPNGVLRLQPKGGQGYHNGVKSVMGHLDGRRNFPRLSIGIGKPPGNMDMKAF 190

Query: 257 LLQKFSSVERKQIDTALEQGVEAVRTLALNGFSQRVNRFNLSQKYKYHKV 306
           LLQKFS +E+KQI+ ALEQG EAV+TL LNGF+Q ++RFNL QKYK+HKV
Sbjct: 191 LLQKFSPLEQKQIEEALEQGSEAVKTLVLNGFNQGISRFNLVQKYKFHKV 240

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BLAST of Chy6G119500.1 vs. ExPASy Swiss-Prot
Match: Q9FKN4 (Chloroplastic group IIB intron splicing facilitator CRS2-A, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CRS2A PE=2 SV=1)

HSP 1 Score: 339.7 bits (870), Expect = 3.4e-92
Identity = 164/229 (71.62%), Postives = 185/229 (80.79%), Query Frame = 0


Query: 77  FHFPSTKPLVSTRLSVRASSPDSDNNGLKVEYTPWLIVGLGNPGNKYHGTRHNVGFEMID 136
           + F  TK       S+RAS P SDN  LK EYTPWLIVGLGNPG KY+GTRHN+GFEMID
Sbjct: 18  YKFSQTKSNSKRFSSLRASLPVSDNKLLKFEYTPWLIVGLGNPGLKYYGTRHNIGFEMID 77

Query: 137 SIAQAQGILMNTIQSKALIGIGSIGEVPILLAKPQTYMNFCGESVGPLAAHYQIPLRHVL 196
            IA+A  I MNTIQSKAL+GIGS+GEVPILL KPQ YMNF GESVGPLAA+YQIPLRH+L
Sbjct: 78  HIARATDISMNTIQSKALVGIGSVGEVPILLVKPQGYMNFSGESVGPLAAYYQIPLRHIL 137

Query: 197 LTYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRREFPRLCIGIGNPPGTMDMKAFL 256
           + YD+M L NGVLRLQPKGGH  HNG+K+V  HL+G R +PRL IGIGNPPG MDMKAFL
Sbjct: 138 MIYDDMGLSNGVLRLQPKGGHSQHNGLKNVTEHLNGCRGYPRLSIGIGNPPGNMDMKAFL 197

Query: 257 LQKFSSVERKQIDTALEQGVEAVRTLALNGFSQRVNRFNLSQKYKYHKV 306
           LQKFS +ERKQ+D  LEQGVE V+TL   GFS  ++RFNL QKYK+HKV
Sbjct: 198 LQKFSPLERKQMDEGLEQGVEGVKTLVEEGFSDSISRFNLGQKYKFHKV 246

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BLAST of Chy6G119500.1 vs. ExPASy Swiss-Prot
Match: Q9M5P4 (Chloroplastic group IIB intron splicing facilitator CRS2, chloroplastic OS=Zea mays OX=4577 GN=CRS2 PE=1 SV=1)

HSP 1 Score: 330.1 bits (845), Expect = 2.7e-89
Identity = 165/249 (66.27%), Postives = 193/249 (77.51%), Query Frame = 0


Query: 72  SSSAHFHFP-----------STKPLVSTR----LSVRASSPDSDNNGLKVEYTPWLIVGL 131
           S+S+HF  P            T PL   R     +V +S PD       VEYTPWLI GL
Sbjct: 10  STSSHFSAPFLPSFRMPRKSLTAPLHRIRRPRPFTVVSSVPDPAAG--PVEYTPWLIAGL 69

Query: 132 GNPGNKYHGTRHNVGFEMIDSIAQAQGILMNTIQSKALIGIGSIGEVPILLAKPQTYMNF 191
           GNPGNKY+GTRHNVGFEM+D IA  +GI MNTIQSK+L+GIGSIGEVP+L+ KPQ+YMN+
Sbjct: 70  GNPGNKYYGTRHNVGFEMVDRIAAEEGITMNTIQSKSLLGIGSIGEVPVLVVKPQSYMNY 129

Query: 192 CGESVGPLAAHYQIPLRHVLLTYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRREF 251
            GE++GPLAA+YQ+PLRH+LL YD+ SLPNGVLRLQ KGGHG HNG+++V+ HLDGRREF
Sbjct: 130 SGEAIGPLAAYYQVPLRHILLIYDDTSLPNGVLRLQKKGGHGRHNGLQNVIEHLDGRREF 189

Query: 252 PRLCIGIGNPPGTMDMKAFLLQKFSSVERKQIDTALEQGVEAVRTLALNGFSQRVNRFNL 306
           PRL IGIG+PPG MD +AFLLQKFSS ER QIDTALEQGV+AVRTL L GFS    RFNL
Sbjct: 190 PRLSIGIGSPPGKMDPRAFLLQKFSSEERVQIDTALEQGVDAVRTLVLKGFSGSTERFNL 249

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BLAST of Chy6G119500.1 vs. ExPASy Swiss-Prot
Match: Q5ZCL8 (Chloroplastic group IIB intron splicing facilitator CRS2, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0132800 PE=2 SV=1)

HSP 1 Score: 321.2 bits (822), Expect = 1.2e-86
Identity = 169/284 (59.51%), Postives = 204/284 (71.83%), Query Frame = 0


Query: 22  LCVSVFNSSSFSSTALTTSSTSSARKSTLLFTKPSNLHAASFQSVSLFSNSSSAHFHFPS 81
           + ++V   +S   + LTTSS    R+  LL      L AA+                 P 
Sbjct: 1   MSLAVATPASARLSPLTTSSPEPCRRRRLL------LSAAA-----------------PL 60

Query: 82  TKPLVSTRLSVRASSPDSDNNGLKVEYTPWLIVGLGNPGNKYHGTRHNVGFEMIDSIAQA 141
            +  +  R++V AS PD        EYTPWLI GLGNPG+KYHGTRHNVGFEM+D IA+ 
Sbjct: 61  RRTRLRRRIAVVASVPDP--AARPAEYTPWLIAGLGNPGSKYHGTRHNVGFEMVDRIARD 120

Query: 142 QGILMNTIQSKALIGIGSIGEVPILLAKPQTYMNFCGESVGPLAAHYQIPLRHVLLTYDE 201
           +GI MNTIQSK+L+GIGSIGEVP+LL KPQ+Y+N+ GE++GPLAA+YQ+PLRH+L+ YDE
Sbjct: 121 EGITMNTIQSKSLLGIGSIGEVPVLLVKPQSYINYSGEAIGPLAAYYQVPLRHILVMYDE 180

Query: 202 MSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRREFPRLCIGIGNPPGTMDMKAFLLQKFS 261
           MSLPNGVLRLQ KGGHG HNG+++VM  LD  RE PRL IGIG+PPG MD +AFLLQKFS
Sbjct: 181 MSLPNGVLRLQRKGGHGRHNGLQNVMECLDSSRELPRLSIGIGSPPGKMDTRAFLLQKFS 240

Query: 262 SVERKQIDTALEQGVEAVRTLALNGFSQRVNRFNLSQKYKYHKV 306
           S ER QIDTALEQGV+AVRTL L GFS  + RFNL QKYK+H V
Sbjct: 241 SEERLQIDTALEQGVDAVRTLVLKGFSGSIERFNLVQKYKFHSV 259

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BLAST of Chy6G119500.1 vs. ExPASy Swiss-Prot
Match: Q6NLS8 (Peptidyl-tRNA hydrolase, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g19830 PE=2 SV=1)

HSP 1 Score: 251.5 bits (641), Expect = 1.2e-65
Identity = 116/197 (58.88%), Postives = 148/197 (75.13%), Query Frame = 0


Query: 108 YTPWLIVGLGNPGNKYHGTRHNVGFEMIDSIAQAQGILMNTIQSKALIGIGSIGEVPILL 167
           + PWL +GLGNPG+KY GTRHN+GFEMID  A++ GI MN +  KA++G G + ++P++L
Sbjct: 16  HRPWLFLGLGNPGDKYKGTRHNIGFEMIDVFAESVGIQMNLVNFKAIMGQGFVADLPVIL 75

Query: 168 AKPQTYMNFCGESVGPLAAHYQIPLRHVLLTYDEMSLPNGVLRLQPKGGHGHHNGVKSVM 227
           AKPQTYMN  GES GPLAA+Y++PL  VL+ +D+M LP GVLRLQ KGGHG HNG+KSVM
Sbjct: 76  AKPQTYMNLSGESSGPLAAYYKLPLNRVLVVHDDMQLPCGVLRLQEKGGHGCHNGLKSVM 135

Query: 228 GHLDGRREFPRLCIGIGNPPGTMDMKAFLLQKFSSVERKQIDTALEQGVEAVRTLALNGF 287
            H  G REF RL IGIG PPG MD KAFLLQKFS   R+++D AL +GV+A++ +    F
Sbjct: 136 NHFRGNREFARLRIGIGKPPGQMDPKAFLLQKFSMPARERMDKALAEGVDALKLVLAKDF 195

Query: 288 SQRVNRFNLSQKYKYHK 305
            +    FN+ QKYK+ K
Sbjct: 196 GESWRLFNVEQKYKHLK 212

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BLAST of Chy6G119500.1 vs. ExPASy TrEMBL
Match: A0A0A0LCC6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G257600 PE=3 SV=1)

HSP 1 Score: 495.0 bits (1273), Expect = 2.3e-136
Identity = 243/248 (97.98%), Postives = 245/248 (98.79%), Query Frame = 0


Query: 58  LHAASFQSVSLFSNSSSAHFHFPSTKPLVSTRLSVRASSPDSDNNGLKVEYTPWLIVGLG 117
           L AASFQSVSLFSNSSSAHFHFPSTKPLVSTRLSVRASSPDSD+NGLKVEYTPWLIVGLG
Sbjct: 2   LFAASFQSVSLFSNSSSAHFHFPSTKPLVSTRLSVRASSPDSDSNGLKVEYTPWLIVGLG 61

Query: 118 NPGNKYHGTRHNVGFEMIDSIAQAQGILMNTIQSKALIGIGSIGEVPILLAKPQTYMNFC 177
           NPGNKYHGTRHNVGFEMIDSIAQAQGILMNTIQSKALIGIGSIGEVPILLAKPQTYMNFC
Sbjct: 62  NPGNKYHGTRHNVGFEMIDSIAQAQGILMNTIQSKALIGIGSIGEVPILLAKPQTYMNFC 121

Query: 178 GESVGPLAAHYQIPLRHVLLTYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRREFP 237
           GESVGPLAAHYQIPLRHVLLTYDEM+LPNGVLRLQPK GHGHHNGVKSVMGHLDGRREFP
Sbjct: 122 GESVGPLAAHYQIPLRHVLLTYDEMNLPNGVLRLQPKAGHGHHNGVKSVMGHLDGRREFP 181

Query: 238 RLCIGIGNPPGTMDMKAFLLQKFSSVERKQIDTALEQGVEAVRTLALNGFSQRVNRFNLS 297
           RLCIGIGNPPGTMDMKAFLLQKFSSVERKQID ALEQGVEAVRTLALNGFSQRVNRFNLS
Sbjct: 182 RLCIGIGNPPGTMDMKAFLLQKFSSVERKQIDAALEQGVEAVRTLALNGFSQRVNRFNLS 241

Query: 298 QKYKYHKV 306
           QKYKYHKV
Sbjct: 242 QKYKYHKV 249

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BLAST of Chy6G119500.1 vs. ExPASy TrEMBL
Match: A0A1S3CFG5 (chloroplastic group IIB intron splicing facilitator CRS2-B, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103500129 PE=3 SV=1)

HSP 1 Score: 487.6 bits (1254), Expect = 3.7e-134
Identity = 240/249 (96.39%), Postives = 245/249 (98.39%), Query Frame = 0


Query: 58  LHAASFQSVSLFSNSSSAHFHFPSTKPLVSTRLSVRASSPDSD-NNGLKVEYTPWLIVGL 117
           L+AASFQSVSLFSNSS+AH+H PSTKPLVSTRLSVRAS PDSD NNG+KVEYTPWLIVGL
Sbjct: 2   LYAASFQSVSLFSNSSTAHYHSPSTKPLVSTRLSVRASLPDSDNNNGVKVEYTPWLIVGL 61

Query: 118 GNPGNKYHGTRHNVGFEMIDSIAQAQGILMNTIQSKALIGIGSIGEVPILLAKPQTYMNF 177
           GNPGNKYHGTRHNVGFEMIDSIAQAQGILMNTIQSKALIGIGSIGEVPILLAKPQTYMNF
Sbjct: 62  GNPGNKYHGTRHNVGFEMIDSIAQAQGILMNTIQSKALIGIGSIGEVPILLAKPQTYMNF 121

Query: 178 CGESVGPLAAHYQIPLRHVLLTYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRREF 237
           CGESVGPLAAHYQIPLRH+LLTYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRREF
Sbjct: 122 CGESVGPLAAHYQIPLRHILLTYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRREF 181

Query: 238 PRLCIGIGNPPGTMDMKAFLLQKFSSVERKQIDTALEQGVEAVRTLALNGFSQRVNRFNL 297
           PRLCIGIGNPPGTMDMKAFLLQKFSSVERKQID ALEQGVEAVRTLALNGFSQRVNRFNL
Sbjct: 182 PRLCIGIGNPPGTMDMKAFLLQKFSSVERKQIDAALEQGVEAVRTLALNGFSQRVNRFNL 241

Query: 298 SQKYKYHKV 306
           SQKYKYHKV
Sbjct: 242 SQKYKYHKV 250

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BLAST of Chy6G119500.1 vs. ExPASy TrEMBL
Match: A0A6J1D2Z6 (chloroplastic group IIB intron splicing facilitator CRS2-B, chloroplastic-like OS=Momordica charantia OX=3673 GN=LOC111016856 PE=3 SV=1)

HSP 1 Score: 446.8 bits (1148), Expect = 7.2e-122
Identity = 224/248 (90.32%), Postives = 230/248 (92.74%), Query Frame = 0


Query: 58  LHAASFQSVSLFSNSSSAHFHFPSTKPLVSTRLSVRASSPDSDNNGLKVEYTPWLIVGLG 117
           L+A S QSV L SNSSSAHF     K LV TRLSVRAS  D+D NG+KVEYTPWLIVGLG
Sbjct: 2   LYAVSVQSVCLLSNSSSAHFRPRLRKRLVPTRLSVRASLLDND-NGVKVEYTPWLIVGLG 61

Query: 118 NPGNKYHGTRHNVGFEMIDSIAQAQGILMNTIQSKALIGIGSIGEVPILLAKPQTYMNFC 177
           NPGNKYHGTRHNVGFEMIDSIAQAQ ILMNTIQSKALIGIGSIGEVPILLAKPQTYMNFC
Sbjct: 62  NPGNKYHGTRHNVGFEMIDSIAQAQDILMNTIQSKALIGIGSIGEVPILLAKPQTYMNFC 121

Query: 178 GESVGPLAAHYQIPLRHVLLTYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRREFP 237
           GESVGPLAAHYQIPLRH+LL YDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRREFP
Sbjct: 122 GESVGPLAAHYQIPLRHILLVYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRREFP 181

Query: 238 RLCIGIGNPPGTMDMKAFLLQKFSSVERKQIDTALEQGVEAVRTLALNGFSQRVNRFNLS 297
           RLCIGIGNPPGTMDMKAFLLQKF SVERKQID ALEQGVEAVRTLALNGFSQRVNRFNL+
Sbjct: 182 RLCIGIGNPPGTMDMKAFLLQKFGSVERKQIDAALEQGVEAVRTLALNGFSQRVNRFNLT 241

Query: 298 QKYKYHKV 306
           QKYKY+KV
Sbjct: 242 QKYKYNKV 248

[Close]

BLAST of Chy6G119500.1 vs. ExPASy TrEMBL
Match: A0A6J1K6X4 (chloroplastic group IIB intron splicing facilitator CRS2-B, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111492843 PE=3 SV=1)

HSP 1 Score: 446.0 bits (1146), Expect = 1.2e-121
Identity = 223/248 (89.92%), Postives = 230/248 (92.74%), Query Frame = 0


Query: 58  LHAASFQSVSLFSNSSSAHFHFPSTKPLVSTRLSVRASSPDSDNNGLKVEYTPWLIVGLG 117
           L+AAS  SV LFSNSSSAHF     K LV TRLSVRAS  D+D NG+KVEYTPWLIVGLG
Sbjct: 2   LYAASVPSVCLFSNSSSAHFPSRFPKRLVPTRLSVRASLQDND-NGVKVEYTPWLIVGLG 61

Query: 118 NPGNKYHGTRHNVGFEMIDSIAQAQGILMNTIQSKALIGIGSIGEVPILLAKPQTYMNFC 177
           NPGNKYHGTRHNVGFEMIDSIAQAQGILMNTIQSKALIGIGSIGEVPILLAKPQTYMNFC
Sbjct: 62  NPGNKYHGTRHNVGFEMIDSIAQAQGILMNTIQSKALIGIGSIGEVPILLAKPQTYMNFC 121

Query: 178 GESVGPLAAHYQIPLRHVLLTYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRREFP 237
           GESVGPLA HYQIPLRH+LL YDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRREFP
Sbjct: 122 GESVGPLAVHYQIPLRHILLVYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRREFP 181

Query: 238 RLCIGIGNPPGTMDMKAFLLQKFSSVERKQIDTALEQGVEAVRTLALNGFSQRVNRFNLS 297
           RLCIGIGNPPGTMDMKAFLLQKFSSVERKQID ALEQGVEAVRTLAL GFS+ V+RFNL+
Sbjct: 182 RLCIGIGNPPGTMDMKAFLLQKFSSVERKQIDAALEQGVEAVRTLALKGFSKGVDRFNLT 241

Query: 298 QKYKYHKV 306
           QKYKYHKV
Sbjct: 242 QKYKYHKV 248

[Close]

BLAST of Chy6G119500.1 vs. ExPASy TrEMBL
Match: A0A6J1G9M7 (chloroplastic group IIB intron splicing facilitator CRS2-B, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111452203 PE=3 SV=1)

HSP 1 Score: 444.1 bits (1141), Expect = 4.7e-121
Identity = 221/248 (89.11%), Postives = 230/248 (92.74%), Query Frame = 0


Query: 58  LHAASFQSVSLFSNSSSAHFHFPSTKPLVSTRLSVRASSPDSDNNGLKVEYTPWLIVGLG 117
           L+AAS  SV LFSNSS AHF     K LV TRLSVRAS PD+D NG+KVEYTPWLIVGLG
Sbjct: 2   LYAASVPSVCLFSNSSIAHFPSRFPKRLVPTRLSVRASLPDND-NGVKVEYTPWLIVGLG 61

Query: 118 NPGNKYHGTRHNVGFEMIDSIAQAQGILMNTIQSKALIGIGSIGEVPILLAKPQTYMNFC 177
           NPGNKYHGTRHNVGF+MIDSIAQAQGILMNTIQSKALIGIGSIGEVPILLAKPQTYMNFC
Sbjct: 62  NPGNKYHGTRHNVGFDMIDSIAQAQGILMNTIQSKALIGIGSIGEVPILLAKPQTYMNFC 121

Query: 178 GESVGPLAAHYQIPLRHVLLTYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRREFP 237
           GESVGPLA HYQIPLRH+LL YDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRREFP
Sbjct: 122 GESVGPLAVHYQIPLRHILLVYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRREFP 181

Query: 238 RLCIGIGNPPGTMDMKAFLLQKFSSVERKQIDTALEQGVEAVRTLALNGFSQRVNRFNLS 297
           RLCIGIGNPPGTMD+KAFLLQKFSSVERKQID ALEQGVEAVRTLAL GFS+ V+RFNL+
Sbjct: 182 RLCIGIGNPPGTMDIKAFLLQKFSSVERKQIDAALEQGVEAVRTLALKGFSKGVDRFNLT 241

Query: 298 QKYKYHKV 306
           QKYKYHKV
Sbjct: 242 QKYKYHKV 248

[Close]

BLAST of Chy6G119500.1 vs. NCBI nr
Match: XP_004145630.1 (chloroplastic group IIB intron splicing facilitator CRS2-B, chloroplastic [Cucumis sativus] >KGN57706.1 hypothetical protein Csa_010483 [Cucumis sativus])

HSP 1 Score: 492 bits (1267), Expect = 1.99e-174
Identity = 243/248 (97.98%), Postives = 245/248 (98.79%), Query Frame = 0


Query: 58  LHAASFQSVSLFSNSSSAHFHFPSTKPLVSTRLSVRASSPDSDNNGLKVEYTPWLIVGLG 117
           L AASFQSVSLFSNSSSAHFHFPSTKPLVSTRLSVRASSPDSD+NGLKVEYTPWLIVGLG
Sbjct: 2   LFAASFQSVSLFSNSSSAHFHFPSTKPLVSTRLSVRASSPDSDSNGLKVEYTPWLIVGLG 61

Query: 118 NPGNKYHGTRHNVGFEMIDSIAQAQGILMNTIQSKALIGIGSIGEVPILLAKPQTYMNFC 177
           NPGNKYHGTRHNVGFEMIDSIAQAQGILMNTIQSKALIGIGSIGEVPILLAKPQTYMNFC
Sbjct: 62  NPGNKYHGTRHNVGFEMIDSIAQAQGILMNTIQSKALIGIGSIGEVPILLAKPQTYMNFC 121

Query: 178 GESVGPLAAHYQIPLRHVLLTYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRREFP 237
           GESVGPLAAHYQIPLRHVLLTYDEM+LPNGVLRLQPK GHGHHNGVKSVMGHLDGRREFP
Sbjct: 122 GESVGPLAAHYQIPLRHVLLTYDEMNLPNGVLRLQPKAGHGHHNGVKSVMGHLDGRREFP 181

Query: 238 RLCIGIGNPPGTMDMKAFLLQKFSSVERKQIDTALEQGVEAVRTLALNGFSQRVNRFNLS 297
           RLCIGIGNPPGTMDMKAFLLQKFSSVERKQID ALEQGVEAVRTLALNGFSQRVNRFNLS
Sbjct: 182 RLCIGIGNPPGTMDMKAFLLQKFSSVERKQIDAALEQGVEAVRTLALNGFSQRVNRFNLS 241

Query: 298 QKYKYHKV 305
           QKYKYHKV
Sbjct: 242 QKYKYHKV 249

[Close]

BLAST of Chy6G119500.1 vs. NCBI nr
Match: XP_008461557.1 (PREDICTED: chloroplastic group IIB intron splicing facilitator CRS2-B, chloroplastic [Cucumis melo])

HSP 1 Score: 485 bits (1248), Expect = 1.62e-171
Identity = 240/249 (96.39%), Postives = 245/249 (98.39%), Query Frame = 0


Query: 58  LHAASFQSVSLFSNSSSAHFHFPSTKPLVSTRLSVRASSPDSDNN-GLKVEYTPWLIVGL 117
           L+AASFQSVSLFSNSS+AH+H PSTKPLVSTRLSVRAS PDSDNN G+KVEYTPWLIVGL
Sbjct: 2   LYAASFQSVSLFSNSSTAHYHSPSTKPLVSTRLSVRASLPDSDNNNGVKVEYTPWLIVGL 61

Query: 118 GNPGNKYHGTRHNVGFEMIDSIAQAQGILMNTIQSKALIGIGSIGEVPILLAKPQTYMNF 177
           GNPGNKYHGTRHNVGFEMIDSIAQAQGILMNTIQSKALIGIGSIGEVPILLAKPQTYMNF
Sbjct: 62  GNPGNKYHGTRHNVGFEMIDSIAQAQGILMNTIQSKALIGIGSIGEVPILLAKPQTYMNF 121

Query: 178 CGESVGPLAAHYQIPLRHVLLTYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRREF 237
           CGESVGPLAAHYQIPLRH+LLTYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRREF
Sbjct: 122 CGESVGPLAAHYQIPLRHILLTYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRREF 181

Query: 238 PRLCIGIGNPPGTMDMKAFLLQKFSSVERKQIDTALEQGVEAVRTLALNGFSQRVNRFNL 297
           PRLCIGIGNPPGTMDMKAFLLQKFSSVERKQID ALEQGVEAVRTLALNGFSQRVNRFNL
Sbjct: 182 PRLCIGIGNPPGTMDMKAFLLQKFSSVERKQIDAALEQGVEAVRTLALNGFSQRVNRFNL 241

Query: 298 SQKYKYHKV 305
           SQKYKYHKV
Sbjct: 242 SQKYKYHKV 250

[Close]

BLAST of Chy6G119500.1 vs. NCBI nr
Match: XP_038899626.1 (chloroplastic group IIB intron splicing facilitator CRS2-B, chloroplastic [Benincasa hispida])

HSP 1 Score: 472 bits (1215), Expect = 1.61e-166
Identity = 234/248 (94.35%), Postives = 241/248 (97.18%), Query Frame = 0


Query: 58  LHAASFQSVSLFSNSSSAHFHFPSTKPLVSTRLSVRASSPDSDNNGLKVEYTPWLIVGLG 117
           L+AAS QSV LFSNSS+AHFH  STKPLVSTRLS+RAS PD+DN G+KVEYTPWLIVGLG
Sbjct: 2   LYAASVQSVCLFSNSSTAHFHPRSTKPLVSTRLSIRASLPDNDN-GVKVEYTPWLIVGLG 61

Query: 118 NPGNKYHGTRHNVGFEMIDSIAQAQGILMNTIQSKALIGIGSIGEVPILLAKPQTYMNFC 177
           NPGNKYHGTRHNVGFEMIDSIAQAQGILMNTIQSKALIGIGSIGEVPILLAKPQTYMNFC
Sbjct: 62  NPGNKYHGTRHNVGFEMIDSIAQAQGILMNTIQSKALIGIGSIGEVPILLAKPQTYMNFC 121

Query: 178 GESVGPLAAHYQIPLRHVLLTYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRREFP 237
           GESVGPLAAHYQIPLRH+LLTYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRREFP
Sbjct: 122 GESVGPLAAHYQIPLRHILLTYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRREFP 181

Query: 238 RLCIGIGNPPGTMDMKAFLLQKFSSVERKQIDTALEQGVEAVRTLALNGFSQRVNRFNLS 297
           RLCIGIGNPPGTMDMKAFLLQKFSSVERKQID ALEQGVEAVRTLALNGFSQRVNRFNL+
Sbjct: 182 RLCIGIGNPPGTMDMKAFLLQKFSSVERKQIDAALEQGVEAVRTLALNGFSQRVNRFNLT 241

Query: 298 QKYKYHKV 305
           QKYKYHKV
Sbjct: 242 QKYKYHKV 248

[Close]

BLAST of Chy6G119500.1 vs. NCBI nr
Match: KAG6607055.1 (Chloroplastic group IIB intron splicing facilitator CRS2-B, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 446 bits (1147), Expect = 1.93e-155
Identity = 233/282 (82.62%), Postives = 245/282 (86.88%), Query Frame = 0


Query: 31  SFSSTALTTSSTSSARKSTLLF-------TKPSNLHAASFQSVSLFSNSSSAHFHFPSTK 90
           S SST  T S+ +S   + LLF        + S L+AAS  SV LFSNSS AHF     K
Sbjct: 14  SSSSTPFTASTAASVHPNQLLFQPNHPIYAQVSMLYAASVPSVCLFSNSSIAHFPSRFPK 73

Query: 91  PLVSTRLSVRASSPDSDNNGLKVEYTPWLIVGLGNPGNKYHGTRHNVGFEMIDSIAQAQG 150
            LV TRLSVRAS PD+DN G+KVEYTPWLIVGLGNPGNKYHGTRHNVGFEMIDSIAQAQG
Sbjct: 74  RLVPTRLSVRASLPDNDN-GVKVEYTPWLIVGLGNPGNKYHGTRHNVGFEMIDSIAQAQG 133

Query: 151 ILMNTIQSKALIGIGSIGEVPILLAKPQTYMNFCGESVGPLAAHYQIPLRHVLLTYDEMS 210
           ILMNTIQSKALIGIGSIGEVPILLAKPQTYMNFCGESVGPLA HYQIPLRH+LL YDEMS
Sbjct: 134 ILMNTIQSKALIGIGSIGEVPILLAKPQTYMNFCGESVGPLAVHYQIPLRHILLVYDEMS 193

Query: 211 LPNGVLRLQPKGGHGHHNGVKSVMGHLDGRREFPRLCIGIGNPPGTMDMKAFLLQKFSSV 270
           LPNGVLRLQPKGGHGHHNGVKSVMGHLDGRREFPRLCIGIGNPPGTMD+KAFLLQKFSSV
Sbjct: 194 LPNGVLRLQPKGGHGHHNGVKSVMGHLDGRREFPRLCIGIGNPPGTMDIKAFLLQKFSSV 253

Query: 271 ERKQIDTALEQGVEAVRTLALNGFSQRVNRFNLSQKYKYHKV 305
           ERKQID ALEQGVEAVRTLAL GFS+ V+RFNL+QKYKYHKV
Sbjct: 254 ERKQIDAALEQGVEAVRTLALKGFSKGVDRFNLTQKYKYHKV 294

[Close]

BLAST of Chy6G119500.1 vs. NCBI nr
Match: XP_022148094.1 (chloroplastic group IIB intron splicing facilitator CRS2-B, chloroplastic-like [Momordica charantia])

HSP 1 Score: 444 bits (1142), Expect = 2.12e-155
Identity = 224/248 (90.32%), Postives = 230/248 (92.74%), Query Frame = 0


Query: 58  LHAASFQSVSLFSNSSSAHFHFPSTKPLVSTRLSVRASSPDSDNNGLKVEYTPWLIVGLG 117
           L+A S QSV L SNSSSAHF     K LV TRLSVRAS  D+DN G+KVEYTPWLIVGLG
Sbjct: 2   LYAVSVQSVCLLSNSSSAHFRPRLRKRLVPTRLSVRASLLDNDN-GVKVEYTPWLIVGLG 61

Query: 118 NPGNKYHGTRHNVGFEMIDSIAQAQGILMNTIQSKALIGIGSIGEVPILLAKPQTYMNFC 177
           NPGNKYHGTRHNVGFEMIDSIAQAQ ILMNTIQSKALIGIGSIGEVPILLAKPQTYMNFC
Sbjct: 62  NPGNKYHGTRHNVGFEMIDSIAQAQDILMNTIQSKALIGIGSIGEVPILLAKPQTYMNFC 121

Query: 178 GESVGPLAAHYQIPLRHVLLTYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRREFP 237
           GESVGPLAAHYQIPLRH+LL YDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRREFP
Sbjct: 122 GESVGPLAAHYQIPLRHILLVYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRREFP 181

Query: 238 RLCIGIGNPPGTMDMKAFLLQKFSSVERKQIDTALEQGVEAVRTLALNGFSQRVNRFNLS 297
           RLCIGIGNPPGTMDMKAFLLQKF SVERKQID ALEQGVEAVRTLALNGFSQRVNRFNL+
Sbjct: 182 RLCIGIGNPPGTMDMKAFLLQKFGSVERKQIDAALEQGVEAVRTLALNGFSQRVNRFNLT 241

Query: 298 QKYKYHKV 305
           QKYKY+KV
Sbjct: 242 QKYKYNKV 248

[Close]

BLAST of Chy6G119500.1 vs. TAIR 10
Match: AT5G16140.1 (Peptidyl-tRNA hydrolase family protein )

HSP 1 Score: 360.9 bits (925), Expect = 1.0e-99
Identity = 170/230 (73.91%), Postives = 199/230 (86.52%), Query Frame = 0


Query: 77  FHFPSTKPLV-STRLSVRASSPDSDNNGLKVEYTPWLIVGLGNPGNKYHGTRHNVGFEMI 136
           +HF + KP+    R  V +S+   +++  KVEYTPWLIVGLGNPGNKYHGTRHNVGFEMI
Sbjct: 11  YHFQTQKPVFRKQRFRVCSSTSGGEDDRFKVEYTPWLIVGLGNPGNKYHGTRHNVGFEMI 70

Query: 137 DSIAQAQGILMNTIQSKALIGIGSIGEVPILLAKPQTYMNFCGESVGPLAAHYQIPLRHV 196
           D +A+ +G+LMNTIQSKALIGIG+I +VPILLAKPQTYMNF GESVG LA+HY++PLRH+
Sbjct: 71  DVLARKEGVLMNTIQSKALIGIGAIEDVPILLAKPQTYMNFSGESVGSLASHYRVPLRHI 130

Query: 197 LLTYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRREFPRLCIGIGNPPGTMDMKAF 256
           L+ YDEM+LPNGVLRLQPKGG G+HNGVKSVMGHLDGRR FPRL IGIG PPG MDMKAF
Sbjct: 131 LMIYDEMALPNGVLRLQPKGGQGYHNGVKSVMGHLDGRRNFPRLSIGIGKPPGNMDMKAF 190

Query: 257 LLQKFSSVERKQIDTALEQGVEAVRTLALNGFSQRVNRFNLSQKYKYHKV 306
           LLQKFS +E+KQI+ ALEQG EAV+TL LNGF+Q ++RFNL QKYK+HKV
Sbjct: 191 LLQKFSPLEQKQIEEALEQGSEAVKTLVLNGFNQGISRFNLVQKYKFHKV 240

[Close]

BLAST of Chy6G119500.1 vs. TAIR 10
Match: AT5G16140.2 (Peptidyl-tRNA hydrolase family protein )

HSP 1 Score: 360.9 bits (925), Expect = 1.0e-99
Identity = 170/230 (73.91%), Postives = 199/230 (86.52%), Query Frame = 0


Query: 77  FHFPSTKPLV-STRLSVRASSPDSDNNGLKVEYTPWLIVGLGNPGNKYHGTRHNVGFEMI 136
           +HF + KP+    R  V +S+   +++  KVEYTPWLIVGLGNPGNKYHGTRHNVGFEMI
Sbjct: 11  YHFQTQKPVFRKQRFRVCSSTSGGEDDRFKVEYTPWLIVGLGNPGNKYHGTRHNVGFEMI 70

Query: 137 DSIAQAQGILMNTIQSKALIGIGSIGEVPILLAKPQTYMNFCGESVGPLAAHYQIPLRHV 196
           D +A+ +G+LMNTIQSKALIGIG+I +VPILLAKPQTYMNF GESVG LA+HY++PLRH+
Sbjct: 71  DVLARKEGVLMNTIQSKALIGIGAIEDVPILLAKPQTYMNFSGESVGSLASHYRVPLRHI 130

Query: 197 LLTYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRREFPRLCIGIGNPPGTMDMKAF 256
           L+ YDEM+LPNGVLRLQPKGG G+HNGVKSVMGHLDGRR FPRL IGIG PPG MDMKAF
Sbjct: 131 LMIYDEMALPNGVLRLQPKGGQGYHNGVKSVMGHLDGRRNFPRLSIGIGKPPGNMDMKAF 190

Query: 257 LLQKFSSVERKQIDTALEQGVEAVRTLALNGFSQRVNRFNLSQKYKYHKV 306
           LLQKFS +E+KQI+ ALEQG EAV+TL LNGF+Q ++RFNL QKYK+HKV
Sbjct: 191 LLQKFSPLEQKQIEEALEQGSEAVKTLVLNGFNQGISRFNLVQKYKFHKV 240

[Close]

BLAST of Chy6G119500.1 vs. TAIR 10
Match: AT5G38290.2 (Peptidyl-tRNA hydrolase family protein )

HSP 1 Score: 339.7 bits (870), Expect = 2.4e-93
Identity = 164/229 (71.62%), Postives = 185/229 (80.79%), Query Frame = 0


Query: 77  FHFPSTKPLVSTRLSVRASSPDSDNNGLKVEYTPWLIVGLGNPGNKYHGTRHNVGFEMID 136
           + F  TK       S+RAS P SDN  LK EYTPWLIVGLGNPG KY+GTRHN+GFEMID
Sbjct: 22  YKFSQTKSNSKRFSSLRASLPVSDNKLLKFEYTPWLIVGLGNPGLKYYGTRHNIGFEMID 81

Query: 137 SIAQAQGILMNTIQSKALIGIGSIGEVPILLAKPQTYMNFCGESVGPLAAHYQIPLRHVL 196
            IA+A  I MNTIQSKAL+GIGS+GEVPILL KPQ YMNF GESVGPLAA+YQIPLRH+L
Sbjct: 82  HIARATDISMNTIQSKALVGIGSVGEVPILLVKPQGYMNFSGESVGPLAAYYQIPLRHIL 141

Query: 197 LTYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRREFPRLCIGIGNPPGTMDMKAFL 256
           + YD+M L NGVLRLQPKGGH  HNG+K+V  HL+G R +PRL IGIGNPPG MDMKAFL
Sbjct: 142 MIYDDMGLSNGVLRLQPKGGHSQHNGLKNVTEHLNGCRGYPRLSIGIGNPPGNMDMKAFL 201

Query: 257 LQKFSSVERKQIDTALEQGVEAVRTLALNGFSQRVNRFNLSQKYKYHKV 306
           LQKFS +ERKQ+D  LEQGVE V+TL   GFS  ++RFNL QKYK+HKV
Sbjct: 202 LQKFSPLERKQMDEGLEQGVEGVKTLVEEGFSDSISRFNLGQKYKFHKV 250

[Close]

BLAST of Chy6G119500.1 vs. TAIR 10
Match: AT5G38290.1 (Peptidyl-tRNA hydrolase family protein )

HSP 1 Score: 339.7 bits (870), Expect = 2.4e-93
Identity = 164/229 (71.62%), Postives = 185/229 (80.79%), Query Frame = 0


Query: 77  FHFPSTKPLVSTRLSVRASSPDSDNNGLKVEYTPWLIVGLGNPGNKYHGTRHNVGFEMID 136
           + F  TK       S+RAS P SDN  LK EYTPWLIVGLGNPG KY+GTRHN+GFEMID
Sbjct: 18  YKFSQTKSNSKRFSSLRASLPVSDNKLLKFEYTPWLIVGLGNPGLKYYGTRHNIGFEMID 77

Query: 137 SIAQAQGILMNTIQSKALIGIGSIGEVPILLAKPQTYMNFCGESVGPLAAHYQIPLRHVL 196
            IA+A  I MNTIQSKAL+GIGS+GEVPILL KPQ YMNF GESVGPLAA+YQIPLRH+L
Sbjct: 78  HIARATDISMNTIQSKALVGIGSVGEVPILLVKPQGYMNFSGESVGPLAAYYQIPLRHIL 137

Query: 197 LTYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRREFPRLCIGIGNPPGTMDMKAFL 256
           + YD+M L NGVLRLQPKGGH  HNG+K+V  HL+G R +PRL IGIGNPPG MDMKAFL
Sbjct: 138 MIYDDMGLSNGVLRLQPKGGHSQHNGLKNVTEHLNGCRGYPRLSIGIGNPPGNMDMKAFL 197

Query: 257 LQKFSSVERKQIDTALEQGVEAVRTLALNGFSQRVNRFNLSQKYKYHKV 306
           LQKFS +ERKQ+D  LEQGVE V+TL   GFS  ++RFNL QKYK+HKV
Sbjct: 198 LQKFSPLERKQMDEGLEQGVEGVKTLVEEGFSDSISRFNLGQKYKFHKV 246

[Close]

BLAST of Chy6G119500.1 vs. TAIR 10
Match: AT5G19830.1 (Peptidyl-tRNA hydrolase family protein )

HSP 1 Score: 251.5 bits (641), Expect = 8.5e-67
Identity = 116/197 (58.88%), Postives = 148/197 (75.13%), Query Frame = 0


Query: 108 YTPWLIVGLGNPGNKYHGTRHNVGFEMIDSIAQAQGILMNTIQSKALIGIGSIGEVPILL 167
           + PWL +GLGNPG+KY GTRHN+GFEMID  A++ GI MN +  KA++G G + ++P++L
Sbjct: 16  HRPWLFLGLGNPGDKYKGTRHNIGFEMIDVFAESVGIQMNLVNFKAIMGQGFVADLPVIL 75

Query: 168 AKPQTYMNFCGESVGPLAAHYQIPLRHVLLTYDEMSLPNGVLRLQPKGGHGHHNGVKSVM 227
           AKPQTYMN  GES GPLAA+Y++PL  VL+ +D+M LP GVLRLQ KGGHG HNG+KSVM
Sbjct: 76  AKPQTYMNLSGESSGPLAAYYKLPLNRVLVVHDDMQLPCGVLRLQEKGGHGCHNGLKSVM 135

Query: 228 GHLDGRREFPRLCIGIGNPPGTMDMKAFLLQKFSSVERKQIDTALEQGVEAVRTLALNGF 287
            H  G REF RL IGIG PPG MD KAFLLQKFS   R+++D AL +GV+A++ +    F
Sbjct: 136 NHFRGNREFARLRIGIGKPPGQMDPKAFLLQKFSMPARERMDKALAEGVDALKLVLAKDF 195

Query: 288 SQRVNRFNLSQKYKYHK 305
            +    FN+ QKYK+ K
Sbjct: 196 GESWRLFNVEQKYKHLK 212

The following BLAST results are available for this feature:

BLAST of Chy6G119500.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LF14	1.4e-98	73.91	Chloroplastic group IIB intron splicing facilitator CRS2-B, chloroplastic OS=Ara...	[more]
Q9FKN4	3.4e-92	71.62	Chloroplastic group IIB intron splicing facilitator CRS2-A, chloroplastic OS=Ara...	[more]
Q9M5P4	2.7e-89	66.27	Chloroplastic group IIB intron splicing facilitator CRS2, chloroplastic OS=Zea m...	[more]
Q5ZCL8	1.2e-86	59.51	Chloroplastic group IIB intron splicing facilitator CRS2, chloroplastic OS=Oryza...	[more]
Q6NLS8	1.2e-65	58.88	Peptidyl-tRNA hydrolase, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g19...	[more]

BLAST of Chy6G119500.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LCC6	2.3e-136	97.98	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G257600 PE=3 SV=1	[more]
A0A1S3CFG5	3.7e-134	96.39	chloroplastic group IIB intron splicing facilitator CRS2-B, chloroplastic OS=Cuc...	[more]
A0A6J1D2Z6	7.2e-122	90.32	chloroplastic group IIB intron splicing facilitator CRS2-B, chloroplastic-like O...	[more]
A0A6J1K6X4	1.2e-121	89.92	chloroplastic group IIB intron splicing facilitator CRS2-B, chloroplastic-like O...	[more]
A0A6J1G9M7	4.7e-121	89.11	chloroplastic group IIB intron splicing facilitator CRS2-B, chloroplastic-like O...	[more]

BLAST of Chy6G119500.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004145630.1	1.99e-174	97.98	chloroplastic group IIB intron splicing facilitator CRS2-B, chloroplastic [Cucum...	[more]
XP_008461557.1	1.62e-171	96.39	PREDICTED: chloroplastic group IIB intron splicing facilitator CRS2-B, chloropla...	[more]
XP_038899626.1	1.61e-166	94.35	chloroplastic group IIB intron splicing facilitator CRS2-B, chloroplastic [Benin...	[more]
KAG6607055.1	1.93e-155	82.62	Chloroplastic group IIB intron splicing facilitator CRS2-B, chloroplastic, parti...	[more]
XP_022148094.1	2.12e-155	90.32	chloroplastic group IIB intron splicing facilitator CRS2-B, chloroplastic-like [...	[more]

BLAST of Chy6G119500.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G16140.1	1.0e-99	73.91	Peptidyl-tRNA hydrolase family protein	[more]
AT5G16140.2	1.0e-99	73.91	Peptidyl-tRNA hydrolase family protein	[more]
AT5G38290.2	2.4e-93	71.62	Peptidyl-tRNA hydrolase family protein	[more]
AT5G38290.1	2.4e-93	71.62	Peptidyl-tRNA hydrolase family protein	[more]
AT5G19830.1	8.5e-67	58.88	Peptidyl-tRNA hydrolase family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001328	Peptidyl-tRNA hydrolase	TIGRFAM	TIGR00447	TIGR00447	coord: 112..295 e-value: 4.7E-52 score: 174.4
IPR001328	Peptidyl-tRNA hydrolase	PFAM	PF01195	Pept_tRNA_hydro	coord: 112..295 e-value: 2.2E-54 score: 184.0
IPR001328	Peptidyl-tRNA hydrolase	PANTHER	PTHR17224	PEPTIDYL-TRNA HYDROLASE	coord: 76..304
IPR001328	Peptidyl-tRNA hydrolase	HAMAP	MF_00083	Pept_tRNA_hydro_bact	coord: 110..288 score: 29.923649
IPR036416	Peptidyl-tRNA hydrolase superfamily	GENE3D	3.40.50.1470		coord: 106..305 e-value: 1.8E-73 score: 248.3
IPR036416	Peptidyl-tRNA hydrolase superfamily	SUPERFAMILY	53178	Peptidyl-tRNA hydrolase-like	coord: 109..295
None	No IPR available	PANTHER	PTHR17224:SF3	CHLOROPLASTIC GROUP IIB INTRON SPLICING FACILITATOR CRS2-B, CHLOROPLASTIC	coord: 76..304
None	No IPR available	CDD	cd02406	CRS2	coord: 109..299 e-value: 1.47958E-131 score: 369.885
IPR018171	Peptidyl-tRNA hydrolase, conserved site	PROSITE	PS01196	PEPT_TRNA_HYDROL_2	coord: 216..226
IPR018171	Peptidyl-tRNA hydrolase, conserved site	PROSITE	PS01195	PEPT_TRNA_HYDROL_1	coord: 123..136

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Chy6G119500	Chy6G119500	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Chy6G119500.1.exon9	Chy6G119500.1.exon9	exon
Chy6G119500.1.exon8	Chy6G119500.1.exon8	exon
Chy6G119500.1.exon7	Chy6G119500.1.exon7	exon
Chy6G119500.1.exon6	Chy6G119500.1.exon6	exon
Chy6G119500.1.exon5	Chy6G119500.1.exon5	exon
Chy6G119500.1.exon4	Chy6G119500.1.exon4	exon
Chy6G119500.1.exon3	Chy6G119500.1.exon3	exon
Chy6G119500.1.exon2	Chy6G119500.1.exon2	exon
Chy6G119500.1.exon1	Chy6G119500.1.exon1	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Chy6G119500.1.cds9	Chy6G119500.1.cds9	CDS
Chy6G119500.1.cds8	Chy6G119500.1.cds8	CDS
Chy6G119500.1.cds7	Chy6G119500.1.cds7	CDS
Chy6G119500.1.cds6	Chy6G119500.1.cds6	CDS
Chy6G119500.1.cds5	Chy6G119500.1.cds5	CDS
Chy6G119500.1.cds4	Chy6G119500.1.cds4	CDS
Chy6G119500.1.cds3	Chy6G119500.1.cds3	CDS
Chy6G119500.1.cds2	Chy6G119500.1.cds2	CDS
Chy6G119500.1.cds1	Chy6G119500.1.cds1	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Chy6G119500.1	Chy6G119500.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0004045	aminoacyl-tRNA hydrolase activity