Chy3G059120.1 (mRNA) Cucumber (hystrix) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTTTCATTAGCATCTTCTTCAGTCTCACTTCTCTCAAAACCTTCGTTACTCTTCAACCCCATTCGCGCCATTCGTCGCATTTCATGTTCACTTTCATCCAATTCCACTCCCAACGCCTCCTCTTCATCTTCATCTTCACTGGAGTTCAACATCACATTCGCTCCCCCGAAACCCAAGCCCAAATCCGAAGTTGAAGACCCTTTTCAGTTCATCGATCGAAATACCGGCGGTCAGCTCTTCATTCCGTGGATAGTTCGCGGCGAAGATGGGAACCTCAAGCTCCAGTCTCATCCTCCTACACGGTTCCTTCATTCCTTGTCGGAGGATGAAACCAAGCCCAAGAAGAAGAAGGTTTCTTCTGGTAAACCCATAACTGAACCCCCTAAGCATTCGAAGGCTGCGCGAAGGTTTTATAATGAGAACATTAGGGAGTCGTCGCAGCGTCTCAGTAAAGTTCTTGCTGCTACTGGAGGTCGGTGCTTCTCTAACCAAAATGTTAATTCTGTTACTCTGCATTCCTTTCTGTGTTATGTGCTCTTTACTTGTTGGTGTTTGGTTCTTGGCGTGGTGGCTAGAAGTCCTGTTATTTTCGGAAACTATTTAGTTATGTCGATAACAGGTTTTGGCAATAGGATGGAAGCAATAAGTATCAATTTCTAGTTTAGTTAGTAGAATTTGTAAGTATAGTTGCAAATCGGTACTAATTTTGATTTACTTCGCATGAACTTCAAGTTATTTATTTCACGTGGATAGAAATAGAGAGATTGAACAAACTGAGCGGTTTCTACACTAGTGTTATGCGATATACTAGCTTAAACATGGTCTCCACCAACAACACTATACTCCAAGAAAAAAGAATCAAAACAGCACAACGGACCCAGATTAACGAAGGCTCTAATCAATTGAGTAGAGGAAAATTTAATAGGAGCTTAAGCTCCTGTTGGAATGAAACTTATGTGACTCTTTCCTTAGGGCCGGATCCTTACAATTCGTTCCATTGCATTCTTTCATGAGTGGATATATTTTTTCAAGTCTTAACCAACTTGAAGGAGGGTCATATTTTTTTTAGAAACATTTTCTTTCATTGAGAAAGAAAGAATGAATATAAGACATTAAAAAGAACCAAGCCCACAAAAACTCTACTAAAGAAAAAGTTTCCAACTAGGTAAAGTAGTGTGAGAGTAAGGGACATGATTATTCGGATGACCACTAATTAATCTATAATATATATCTTATTCAAATTGTATCTTAATCTTTTTCACAAGTACTTTTTTCAATGAAAATTTTTCACTTTTTATTTATAACGTTGTTGACATTTGGTTTATTCTCCACAAAGTTGAATTCGTTGGATATTGTGAACGAGGTATTGCTTTTGCAAGAAACTTAGGTACTAGAGTGAGTAAATTTGTCATCATATGAATTTGTTGGGCTTAGACTCTCTTGTGTGTACAAGGTTTGGTATTTTCTGATTTTTGGTGATATTATTCATATGACAGGTCTTCCATCTCGAACCTTCTATTATTCTGGTTCTTGCAACATCTACTTATTTGTGGCCTTATTTTTTTCTCACCGTCTATGAATACTTTTTGATTTTGCATGTTTGGTAGTCTGATCTGTTATTTGCTATTGGTTAGGTTTAAGGGAAATTCTTCTCTTTGAGTTCCATTCTCATTGTAAAACCACAAATGGCCGACTATGTAAATTGACACGTACTGTCAAAATGCGGTTGGCAAGTCATGGTAATAAGATCAATTGTTTATAAACTTAAATGTTGGAACATGTTGGATAATGCGTTTGGTAAAGCCATGGTGTACTCTCTCAAAGCTCTTCGGCAATTACAGCATCGAAGATCTAAATTTAAATTGAATTGCTTTTATTTTTCAGCTTGATAATGGATCTTTTGTCTTTATTGTACTGCTTTTGTATTCTCCTTCTTCTCCGTTACTATTACTTTGTATTAGATCTTTTAATAGTCATGACCTAGTGAAGATTTCCGTTTTGAAAGTTAGTTCCGGATATATGAGGGTGCTACGGGGTGTCAACCTAGTTGAGATGTTTGGTTGCACTTGGTTGATCCTCTATAAAAAGCTATTGTATAATCCTCTTGCACTATAAGTTTTAGTATCATTTTCTCTTTTTAATAAAGAGACTTGTTTCTGTTAAAAAAAAGAAACATTTGGCCCGAGAGAAAGGAAGAGGTAGAGATATCTTGTGGAGGTCTGGACTACAACCTGGTTAATATTTGCTCCCCTTTTGGTATTAATTTTCAAAGTTCTATCTATCCTCTATCCATTCTCCCCAACCACTGGATCCTTTTTTACAGTGGTAGGCACTTAAGTTGGAATATTTCTGTAGAATACCTTGTTGTTTCTAGCTAGCCTCAACCCCTGTTAGGATGAGGGCTGCGGATGAAAATTTAGTTGTATACAATTTGGTCGAGCTTGTAAGGATAAATTATAATATATTTTTTTTGTGTTCTATTGTTTAGCATTGGTCACGGTGTGTTCTGTTTCGTCTTCCTCTGCAGTGTCATTGTATATATTAAAACAAAAAATGAAAGAATACAGTGGCGTTAAAAAAATCAAGCCCACAAAATGAAGGGGTTCCAGCTAAGTAAAATGTTTTCTAGTGAATAGTTTTAAAAAAAAGCTTCAAGACAGAAGCCCAAAGGGACACTAAAAATCTCACCAAAGATCAAATCTCACAAGGGTACTTGTCCCTACTGCTAAACACTATCATTCCTCTCCCCCAATATCCCAAACAATTGCACACACCCCAACAAGCCAAAAAATACTGTCTTTCTCTCTAGAAAGGCGGATGGAGGAGGAACTCCTCTATTGCCGCACAAACATATCTCTGCCCAGCAATGTCCTGTTTACATTAATTACCATTGTGCGCTTAAGATCTCATAGTTGGTATTATACTCCTCTTTTGTTTTTCAGTGGCATCAAGACGGAGTAGTGAAGAGCTTATATTTGGAGGCCGCGTTACTGTTAATGGTTCTGTTTGCAATACTCCTCAGGTTGGTTTTTATGTAATTTGGGTTGTATGGATTTTGTCTTAACTATGAAGGTAGAAATGATTTCACCTTTGTGCAGACTCGGGTGGATCCTGCAAGAGACATTATTTACGTGAATGGTAATAGGCTTCCTAAGAAACTACCTCCAAAAGTTTATCTAGCTCTGAACAAGCCAAAAGGGTAGGTCACTTATTCTCTAAGACCAATTTCCCTTTCCTACCCTTAACCCAAGCTTCTCTTGGGAACTTGGCTTTTATGTTCTTCCGTTGCTAATCTATAGAATGCCATGGCAGGTATATTTGTTCATCTGGAAAAAAAGAGTCAAAGTCTGTGATAAGTCTATTTGATGATTATTTGAAGAGTTGGGTATGTCAAACTCAAACCTACTGATCATACCGTTTTCAAGCAAAAGAGTGATAACCTTATGATCATTTTGATGCAAGAAATATAGTTTGCAAGTTATTGAACTACAACTTTGTCTTTGCAGGATAAAACATATCCAGGGCAACCCAAACCACGGCTCTTTACAGTTGGCAGACTTGATGTTGCAACGACTGGGTTGATTATAGTGACAAATGATGGTATGGTATACATACTTCTCATGGTTGCTTCCTTATTTAGGATTGCTGTACAAAAGGTTTGGAGTTTAAAGGATAGATCTTGAACCCTTTGCAAAATTACCATTGATTTTCTTTTTCAGGAGATTTTGCTCAAAGTATCTCACATCCTTCATCTGGTTTATCGAAGGAGTAAGTGATTTAAATTTATTTCCATACACTTTCTAATGCATTGTAAAGTTACCTACACAAGTAACTTCTGCCATTATTTTCAGGGAGTAATCTAGAGATAAACTGGTTTGAAAAAATCTTAGACTATAAACATCATATGAGAAATGATTGTGGGCTATGGCCTATAAATCTGTGGCGTATTTATTAAATGAAAATTACTGGAACCTTTATCTACTGACCATTTCAGGGATGAGAAATATTGGACTGATCATCTTTTTTAGTTCTTTTTTCCCCATAAAAATTTTGAATTAGAGCATTTTCTTTTTTATATTGTGCTTCCCAGTACATATAGCTTTTAAAATTTTGAATGTTGGATTTCTGAAAAATGAAAATGCAACATTTGCTCTTTATTATTGTAGATACATTGCAGCAATAGATGGCACTGTTAGTAAGCAAAACCTGATAGCAATTAGTGAGGGAACAATAATTGATGGCGTCCATTGCACACCGGATTCTGTGGAGTTGCTACCACGGCAGCCAGATATATCCAAGCCTCGTCTGCGTATCGTGGTGCTTTATCCATTCATATTATAGTTTTTAAATATCTATTCACTTTCAGTGCATTCATCACTTCTTGTTTGATCTAATTGGTCATGAAGTAATGATTATATACACCAACAAAATCTGCTGCTTTTACCTTAATTGTTTTTCTTTATCTGTATTCTATTATTGTTGATGCTATACAGCAGTCTGTGGAGGAAAATGTATTAATACCATTTTTTCTGCATGCAGCGCTAGTCATGCATTAGCTCCCGACTAACTTATTGTGCTTTTGCAGGTACATGAAGGAAGGAACCATGAAGTTAGGGAACTTGTAAAAGCTGCTGGTCTAGAGGTTAGCATCTGTTCTGACTTTAGTAGACACTTGCCCATTGCTGTGAGGAAGAAGAAATGTTTCATTTTACTTTTTTCATAATACTTTCTTAACAATAACGATAACAATGAGGAAGAAAAATGTTTCATTTTCTTTTTAGGGGCCTTGTCGTATCATTTTGTTCTTGTTGGTATCTCTGCACTGTAGGCCTTTGTTATAGTTAGCTATAGTTCTTCGTGAAAGATTTTTTTTAACTTATAAATATAAACATGTATTTATACCTACCTTGTGTGAGTTTTTTTCCTGCCATTTATTCGATAGCCACACTATATACTCGGACGTAAGGAAACTGGGAATATGACATCAAGGGAGATATCTTTTTAGTGCCATTTTAACTACTTGTTCTATGCTTGCGTTTGTCTGCCAGTTCTATTTGCATGTGTAATTTCTGGGATTTATTGAAGCAGATCTATTCATTAAAGCGTGTAAGGATCGGTGGCTTCAGACTTCCGTCAGATTTAGGGTAATTTCTTGTTGTGATCACCTTTGATTTATTTTTTATTTGTCAAACTTATTATTGTTTGGGAATGGGTTCAAAATCAGATTAGATGATTCACTTGCAATTCATTTTCACATAACAAAAACCAAATAATTAAGGTAAACAATTTCTCCTATTTTTGCATGTAAGTATTCGGAAATGTTGGTGACTAGTATGTTTTAGGGGAAATTGCATTAGATGATAAAAAAAAATTAGAAAAAAACAGCTCATAACACCTCTTTTTTGCATATTGCAAATTTGGCAAATATGACTAGTAATTGACAGTAATCAGACGGTAATCTGCTTTTAAATTTGTCATTTTTGCAATTTAGAAAATGTAGGTTACATGGGCTCTATTATCATAATTTTTTTTTTTTGCTATTTTTGCAGACTACCCATGTTTCAGCATGTTACTATGATAAAAACACCTTTTTCAACCGAACAACAAAAACACCTTTTTCAACCGAGCAACGAAGATTTTAAAAGTTTATTCTTGAAGATAAATTGAAAATAAAACAATTTTAATACTCATCACAAATGATGATCGGGTGGATATAATTCACTCTCTGTCAAGTCTTTCTTCAAGATTTCCCTTTTTATCTTCGGCCACAACCCTCAAGATTGTGCAACATATTTTCATTTTTTGTACAGTTTTTCGAGGTGAAACTAGAAAGACTTTGAAGTTTTAGCTGCTTACTTGTGAACATGAGTGAGATGAATGTGTTGGCATGTAGATTTATTAAAAATTTCTGCATTATTTCAGGCTTGGAAGTTACACTGAACTAAAGCAAAGTGACCTGAAGGCAATTGGTTGGAAAAGTTGA ATGGTTTCATTAGCATCTTCTTCAGTCTCACTTCTCTCAAAACCTTCGTTACTCTTCAACCCCATTCGCGCCATTCGTCGCATTTCATGTTCACTTTCATCCAATTCCACTCCCAACGCCTCCTCTTCATCTTCATCTTCACTGGAGTTCAACATCACATTCGCTCCCCCGAAACCCAAGCCCAAATCCGAAGTTGAAGACCCTTTTCAGTTCATCGATCGAAATACCGGCGGTCAGCTCTTCATTCCGTGGATAGTTCGCGGCGAAGATGGGAACCTCAAGCTCCAGTCTCATCCTCCTACACGGTTCCTTCATTCCTTGTCGGAGGATGAAACCAAGCCCAAGAAGAAGAAGGTTTCTTCTGGTAAACCCATAACTGAACCCCCTAAGCATTCGAAGGCTGCGCGAAGGTTTTATAATGAGAACATTAGGGAGTCGTCGCAGCGTCTCAGTAAAGTTCTTGCTGCTACTGGAGTGGCATCAAGACGGAGTAGTGAAGAGCTTATATTTGGAGGCCGCGTTACTGTTAATGGTTCTGTTTGCAATACTCCTCAGACTCGGGTGGATCCTGCAAGAGACATTATTTACGTGAATGGTAATAGGCTTCCTAAGAAACTACCTCCAAAAGTTTATCTAGCTCTGAACAAGCCAAAAGGGTATATTTGTTCATCTGGAAAAAAAGAGTCAAAGTCTGTGATAAGTCTATTTGATGATTATTTGAAGAGTTGGGATAAAACATATCCAGGGCAACCCAAACCACGGCTCTTTACAGTTGGCAGACTTGATGTTGCAACGACTGGGTTGATTATAGTGACAAATGATGGAGATTTTGCTCAAAGTATCTCACATCCTTCATCTGGTTTATCGAAGGAATACATTGCAGCAATAGATGGCACTGTTAGTAAGCAAAACCTGATAGCAATTAGTGAGGGAACAATAATTGATGGCGTCCATTGCACACCGGATTCTGTGGAGTTGCTACCACGGCAGCCAGATATATCCAAGCCTCGTCTGCGTATCGTGGTACATGAAGGAAGGAACCATGAAGTTAGGGAACTTGTAAAAGCTGCTGGTCTAGAGATCTATTCATTAAAGCGTGTAAGGATCGGTGGCTTCAGACTTCCGTCAGATTTAGGGCTTGGAAGTTACACTGAACTAAAGCAAAGTGACCTGAAGGCAATTGGTTGGAAAAGTTGA ATGGTTTCATTAGCATCTTCTTCAGTCTCACTTCTCTCAAAACCTTCGTTACTCTTCAACCCCATTCGCGCCATTCGTCGCATTTCATGTTCACTTTCATCCAATTCCACTCCCAACGCCTCCTCTTCATCTTCATCTTCACTGGAGTTCAACATCACATTCGCTCCCCCGAAACCCAAGCCCAAATCCGAAGTTGAAGACCCTTTTCAGTTCATCGATCGAAATACCGGCGGTCAGCTCTTCATTCCGTGGATAGTTCGCGGCGAAGATGGGAACCTCAAGCTCCAGTCTCATCCTCCTACACGGTTCCTTCATTCCTTGTCGGAGGATGAAACCAAGCCCAAGAAGAAGAAGGTTTCTTCTGGTAAACCCATAACTGAACCCCCTAAGCATTCGAAGGCTGCGCGAAGGTTTTATAATGAGAACATTAGGGAGTCGTCGCAGCGTCTCAGTAAAGTTCTTGCTGCTACTGGAGTGGCATCAAGACGGAGTAGTGAAGAGCTTATATTTGGAGGCCGCGTTACTGTTAATGGTTCTGTTTGCAATACTCCTCAGACTCGGGTGGATCCTGCAAGAGACATTATTTACGTGAATGGTAATAGGCTTCCTAAGAAACTACCTCCAAAAGTTTATCTAGCTCTGAACAAGCCAAAAGGGTATATTTGTTCATCTGGAAAAAAAGAGTCAAAGTCTGTGATAAGTCTATTTGATGATTATTTGAAGAGTTGGGATAAAACATATCCAGGGCAACCCAAACCACGGCTCTTTACAGTTGGCAGACTTGATGTTGCAACGACTGGGTTGATTATAGTGACAAATGATGGAGATTTTGCTCAAAGTATCTCACATCCTTCATCTGGTTTATCGAAGGAATACATTGCAGCAATAGATGGCACTGTTAGTAAGCAAAACCTGATAGCAATTAGTGAGGGAACAATAATTGATGGCGTCCATTGCACACCGGATTCTGTGGAGTTGCTACCACGGCAGCCAGATATATCCAAGCCTCGTCTGCGTATCGTGGTACATGAAGGAAGGAACCATGAAGTTAGGGAACTTGTAAAAGCTGCTGGTCTAGAGATCTATTCATTAAAGCGTGTAAGGATCGGTGGCTTCAGACTTCCGTCAGATTTAGGGCTTGGAAGTTACACTGAACTAAAGCAAAGTGACCTGAAGGCAATTGGTTGGAAAAGTTGA MVSLASSSVSLLSKPSLLFNPIRAIRRISCSLSSNSTPNASSSSSSSLEFNITFAPPKPKPKSEVEDPFQFIDRNTGGQLFIPWIVRGEDGNLKLQSHPPTRFLHSLSEDETKPKKKKVSSGKPITEPPKHSKAARRFYNENIRESSQRLSKVLAATGVASRRSSEELIFGGRVTVNGSVCNTPQTRVDPARDIIYVNGNRLPKKLPPKVYLALNKPKGYICSSGKKESKSVISLFDDYLKSWDKTYPGQPKPRLFTVGRLDVATTGLIIVTNDGDFAQSISHPSSGLSKEYIAAIDGTVSKQNLIAISEGTIIDGVHCTPDSVELLPRQPDISKPRLRIVVHEGRNHEVRELVKAAGLEIYSLKRVRIGGFRLPSDLGLGSYTELKQSDLKAIGWKS* Homology
BLAST of Chy3G059120.1 vs. ExPASy Swiss-Prot
Match: Q8L960 (Putative ribosomal large subunit pseudouridine synthase SVR1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=SVR1 PE=1 SV=1) HSP 1 Score: 508.4 bits (1308), Expect = 7.1e-143 Identity = 274/419 (65.39%), Postives = 316/419 (75.42%), Query Frame = 0
BLAST of Chy3G059120.1 vs. ExPASy Swiss-Prot
Match: O67444 (Uncharacterized RNA pseudouridine synthase aq_1464 OS=Aquifex aeolicus (strain VF5) OX=224324 GN=aq_1464 PE=3 SV=1) HSP 1 Score: 144.1 bits (362), Expect = 3.5e-33 Identity = 93/255 (36.47%), Postives = 136/255 (53.33%), Query Frame = 0
BLAST of Chy3G059120.1 vs. ExPASy Swiss-Prot
Match: P35159 (Ribosomal large subunit pseudouridine synthase B OS=Bacillus subtilis (strain 168) OX=224308 GN=rluB PE=1 SV=2) HSP 1 Score: 133.3 bits (334), Expect = 6.2e-30 Identity = 83/247 (33.60%), Postives = 130/247 (52.63%), Query Frame = 0
BLAST of Chy3G059120.1 vs. ExPASy Swiss-Prot
Match: Q9HZ55 (Ribosomal large subunit pseudouridine synthase B OS=Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) OX=208964 GN=rluB PE=3 SV=1) HSP 1 Score: 128.3 bits (321), Expect = 2.0e-28 Identity = 87/247 (35.22%), Postives = 128/247 (51.82%), Query Frame = 0
BLAST of Chy3G059120.1 vs. ExPASy Swiss-Prot
Match: O05668 (Uncharacterized RNA pseudouridine synthase ML1370 OS=Mycobacterium leprae (strain TN) OX=272631 GN=ML1370 PE=3 SV=1) HSP 1 Score: 127.5 bits (319), Expect = 3.4e-28 Identity = 84/227 (37.00%), Postives = 120/227 (52.86%), Query Frame = 0
BLAST of Chy3G059120.1 vs. ExPASy TrEMBL
Match: A0A1S3C3I9 (uncharacterized RNA pseudouridine synthase aq_1464 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103496448 PE=3 SV=1) HSP 1 Score: 751.1 bits (1938), Expect = 2.3e-213 Identity = 382/398 (95.98%), Postives = 389/398 (97.74%), Query Frame = 0
BLAST of Chy3G059120.1 vs. ExPASy TrEMBL
Match: A0A1S4E166 (ribosomal large subunit pseudouridine synthase B isoform X2 OS=Cucumis melo OX=3656 GN=LOC103496448 PE=3 SV=1) HSP 1 Score: 711.4 bits (1835), Expect = 2.0e-201 Identity = 363/379 (95.78%), Postives = 370/379 (97.63%), Query Frame = 0
BLAST of Chy3G059120.1 vs. ExPASy TrEMBL
Match: A0A6J1GVH4 (putative ribosomal large subunit pseudouridine synthase SVR1, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111457913 PE=3 SV=1) HSP 1 Score: 705.7 bits (1820), Expect = 1.1e-199 Identity = 357/398 (89.70%), Postives = 374/398 (93.97%), Query Frame = 0
BLAST of Chy3G059120.1 vs. ExPASy TrEMBL
Match: A0A6J1JT41 (putative ribosomal large subunit pseudouridine synthase SVR1, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111487252 PE=3 SV=1) HSP 1 Score: 703.0 bits (1813), Expect = 7.3e-199 Identity = 355/398 (89.20%), Postives = 373/398 (93.72%), Query Frame = 0
BLAST of Chy3G059120.1 vs. ExPASy TrEMBL
Match: A0A6J1BVE6 (putative ribosomal large subunit pseudouridine synthase SVR1, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111006060 PE=3 SV=1) HSP 1 Score: 702.6 bits (1812), Expect = 9.5e-199 Identity = 361/401 (90.02%), Postives = 377/401 (94.01%), Query Frame = 0
BLAST of Chy3G059120.1 vs. NCBI nr
Match: XP_004140075.1 (putative ribosomal large subunit pseudouridine synthase SVR1, chloroplastic [Cucumis sativus] >KGN48104.2 hypothetical protein Csa_003766 [Cucumis sativus]) HSP 1 Score: 759 bits (1959), Expect = 7.37e-276 Identity = 386/398 (96.98%), Postives = 392/398 (98.49%), Query Frame = 0
BLAST of Chy3G059120.1 vs. NCBI nr
Match: XP_008456519.1 (PREDICTED: uncharacterized RNA pseudouridine synthase aq_1464 isoform X1 [Cucumis melo]) HSP 1 Score: 750 bits (1936), Expect = 2.19e-272 Identity = 382/398 (95.98%), Postives = 389/398 (97.74%), Query Frame = 0
BLAST of Chy3G059120.1 vs. NCBI nr
Match: XP_038884576.1 (putative ribosomal large subunit pseudouridine synthase SVR1, chloroplastic [Benincasa hispida]) HSP 1 Score: 741 bits (1914), Expect = 5.31e-269 Identity = 376/398 (94.47%), Postives = 386/398 (96.98%), Query Frame = 0
BLAST of Chy3G059120.1 vs. NCBI nr
Match: XP_016901969.1 (PREDICTED: ribosomal large subunit pseudouridine synthase B isoform X2 [Cucumis melo]) HSP 1 Score: 711 bits (1836), Expect = 1.86e-257 Identity = 363/379 (95.78%), Postives = 370/379 (97.63%), Query Frame = 0
BLAST of Chy3G059120.1 vs. NCBI nr
Match: XP_022956132.1 (putative ribosomal large subunit pseudouridine synthase SVR1, chloroplastic [Cucurbita moschata] >XP_023515775.1 putative ribosomal large subunit pseudouridine synthase SVR1, chloroplastic [Cucurbita pepo subsp. pepo] >KAG6602297.1 putative ribosomal large subunit pseudouridine synthase SVR1, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 704 bits (1818), Expect = 2.25e-254 Identity = 357/398 (89.70%), Postives = 374/398 (93.97%), Query Frame = 0
BLAST of Chy3G059120.1 vs. TAIR 10
Match: AT2G39140.1 (pseudouridine synthase family protein ) HSP 1 Score: 508.4 bits (1308), Expect = 5.1e-144 Identity = 274/419 (65.39%), Postives = 316/419 (75.42%), Query Frame = 0
BLAST of Chy3G059120.1 vs. TAIR 10
Match: AT3G43340.1 (Pseudouridine synthase family protein ) HSP 1 Score: 116.3 bits (290), Expect = 5.6e-26 Identity = 55/74 (74.32%), Postives = 64/74 (86.49%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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