Chy3G058870.1 (mRNA) Cucumber (hystrix) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTCTCTGCTTGAGCTGTTTTGTCCTTCCGAAGAACCGCAACAACGTCCAAGGTCATTAGCCGAAAAAGATGAGTCATGGTCGGGTTCTTGGTGTAGGGAAAGAGAGTAGCCGTAGCTTCGACCATCCTTGCCAGCATATTATGGTTTGGATGCTCTTGCCCAAGAGAAAGAGGGTTCAGGCCAGTGCAATGCGAAATTCCCAGTCCACTACTTCTATGCATGGCTAGACCGGTATTTTCCTAAGTTGTATATGAGATTGCCGCTTTCGCACCTGGGAAAGCAGAAAGATTATGCCTCAGAGATGCTTGCAATTGAGAACATTGAAGTCGGGAATTGA ATGGCTCTCTGCTTGAGCTGTTTTGTCCTTCCGAAGAACCGCAACAACGTCCAAGCATATTATGGTTTGGATGCTCTTGCCCAAGAGAAAGAGGGTTCAGGCCAGTGCAATGCGAAATTCCCAGTCCACTACTTCTATGCATGGCTAGACCGGTATTTTCCTAAGTTGTATATGAGATTGCCGCTTTCGCACCTGGGAAAGCAGAAAGATTATGCCTCAGAGATGCTTGCAATTGAGAACATTGAAGTCGGGAATTGA ATGGCTCTCTGCTTGAGCTGTTTTGTCCTTCCGAAGAACCGCAACAACGTCCAAGCATATTATGGTTTGGATGCTCTTGCCCAAGAGAAAGAGGGTTCAGGCCAGTGCAATGCGAAATTCCCAGTCCACTACTTCTATGCATGGCTAGACCGGTATTTTCCTAAGTTGTATATGAGATTGCCGCTTTCGCACCTGGGAAAGCAGAAAGATTATGCCTCAGAGATGCTTGCAATTGAGAACATTGAAGTCGGGAATTGA MALCLSCFVLPKNRNNVQAYYGLDALAQEKEGSGQCNAKFPVHYFYAWLDRYFPKLYMRLPLSHLGKQKDYASEMLAIENIEVGN* Homology
BLAST of Chy3G058870.1 vs. ExPASy TrEMBL
Match: A0A7J0D964 (Uncharacterized protein OS=Actinidia rufa OX=165716 GN=Acr_00g0004140 PE=4 SV=1) HSP 1 Score: 117.1 bits (292), Expect = 3.7e-23 Identity = 53/65 (81.54%), Postives = 56/65 (86.15%), Query Frame = 0
BLAST of Chy3G058870.1 vs. ExPASy TrEMBL
Match: B9TJL6 (Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_1990370 PE=4 SV=1) HSP 1 Score: 115.9 bits (289), Expect = 8.2e-23 Identity = 52/65 (80.00%), Postives = 56/65 (86.15%), Query Frame = 0
BLAST of Chy3G058870.1 vs. ExPASy TrEMBL
Match: B9TCM5 (Uncharacterized protein (Fragment) OS=Ricinus communis OX=3988 GN=RCOM_2116740 PE=4 SV=1) HSP 1 Score: 115.9 bits (289), Expect = 8.2e-23 Identity = 52/65 (80.00%), Postives = 56/65 (86.15%), Query Frame = 0
BLAST of Chy3G058870.1 vs. ExPASy TrEMBL
Match: A0A6V7PZ44 (Uncharacterized protein OS=Ananas comosus var. bracteatus OX=296719 GN=CB5_LOCUS19158 PE=4 SV=1) HSP 1 Score: 95.9 bits (237), Expect = 8.8e-17 Identity = 42/56 (75.00%), Postives = 47/56 (83.93%), Query Frame = 0
BLAST of Chy3G058870.1 vs. ExPASy TrEMBL
Match: A5AFS6 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_004352 PE=4 SV=1) HSP 1 Score: 94.0 bits (232), Expect = 3.3e-16 Identity = 42/51 (82.35%), Postives = 44/51 (86.27%), Query Frame = 0
BLAST of Chy3G058870.1 vs. NCBI nr
Match: GFS28827.1 (hypothetical protein Acr_00g0004140 [Actinidia rufa] >GFS28840.1 hypothetical protein Acr_00g0004230 [Actinidia rufa] >GFS28850.1 hypothetical protein Acr_00g0004280 [Actinidia rufa]) HSP 1 Score: 115 bits (287), Expect = 5.76e-31 Identity = 53/65 (81.54%), Postives = 56/65 (86.15%), Query Frame = 0
BLAST of Chy3G058870.1 vs. NCBI nr
Match: EEF26390.1 (conserved hypothetical protein, partial [Ricinus communis]) HSP 1 Score: 114 bits (284), Expect = 1.56e-30 Identity = 52/65 (80.00%), Postives = 56/65 (86.15%), Query Frame = 0
BLAST of Chy3G058870.1 vs. NCBI nr
Match: EEF23949.1 (conserved hypothetical protein [Ricinus communis]) HSP 1 Score: 114 bits (284), Expect = 1.65e-30 Identity = 52/65 (80.00%), Postives = 56/65 (86.15%), Query Frame = 0
BLAST of Chy3G058870.1 vs. NCBI nr
Match: KAF7117298.1 (hypothetical protein RHSIM_RhsimMtG0003800 [Rhododendron simsii]) HSP 1 Score: 115 bits (287), Expect = 1.72e-28 Identity = 53/65 (81.54%), Postives = 56/65 (86.15%), Query Frame = 0
BLAST of Chy3G058870.1 vs. NCBI nr
Match: CAD1835947.1 (unnamed protein product [Ananas comosus var. bracteatus]) HSP 1 Score: 94.7 bits (234), Expect = 1.76e-22 Identity = 42/56 (75.00%), Postives = 47/56 (83.93%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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