Chy2G040580.1 (mRNA) Cucumber (hystrix) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGGACAAACATAGACTATGATTTTTATATCACGAAACTTCACAAACATGAAGATTATGTTCTGATAGAGGGAGAACATGTTGACTTCAACGCCAGAGAAATCAACGTATTGTATGATTTGCATAATGATGCAAAAGCAGAAGGAAATAAAATTATTGAAGAGCCTACTGAAATAGAGATTAATGACGTATTGACTTTAGAGGCGCAACTAGGCGTTGAATGA ATGAGGACAAACATAGACTATGATTTTTATATCACGAAACTTCACAAACATGAAGATTATGTTCTGATAGAGGGAGAACATGTTGACTTCAACGCCAGAGAAATCAACGTATTGTATGATTTGCATAATGATGCAAAAGCAGAAGGAAATAAAATTATTGAAGAGCCTACTGAAATAGAGATTAATGACGTATTGACTTTAGAGGCGCAACTAGGCGTTGAATGA ATGAGGACAAACATAGACTATGATTTTTATATCACGAAACTTCACAAACATGAAGATTATGTTCTGATAGAGGGAGAACATGTTGACTTCAACGCCAGAGAAATCAACGTATTGTATGATTTGCATAATGATGCAAAAGCAGAAGGAAATAAAATTATTGAAGAGCCTACTGAAATAGAGATTAATGACGTATTGACTTTAGAGGCGCAACTAGGCGTTGAATGA MRTNIDYDFYITKLHKHEDYVLIEGEHVDFNAREINVLYDLHNDAKAEGNKIIEEPTEIEINDVLTLEAQLGVE* Homology
BLAST of Chy2G040580.1 vs. ExPASy TrEMBL
Match: A0A0A0KPJ8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G044000 PE=4 SV=1) HSP 1 Score: 59.7 bits (143), Expect = 6.1e-06 Identity = 29/50 (58.00%), Postives = 35/50 (70.00%), Query Frame = 0
BLAST of Chy2G040580.1 vs. NCBI nr
Match: KAE8648203.1 (hypothetical protein Csa_018377 [Cucumis sativus]) HSP 1 Score: 58.2 bits (139), Expect = 9.41e-09 Identity = 28/48 (58.33%), Postives = 34/48 (70.83%), Query Frame = 0
BLAST of Chy2G040580.1 vs. NCBI nr
Match: XP_038876674.1 (chromatin assembly factor 1 subunit A-like, partial [Benincasa hispida]) HSP 1 Score: 58.9 bits (141), Expect = 6.42e-08 Identity = 29/66 (43.94%), Postives = 44/66 (66.67%), Query Frame = 0
BLAST of Chy2G040580.1 vs. NCBI nr
Match: WP_217833181.1 (hypothetical protein, partial [Synechococcus sp. PCC 7002]) HSP 1 Score: 56.2 bits (134), Expect = 1.17e-07 Identity = 31/66 (46.97%), Postives = 42/66 (63.64%), Query Frame = 0
BLAST of Chy2G040580.1 vs. NCBI nr
Match: XP_038904284.1 (stress response protein NST1-like [Benincasa hispida]) HSP 1 Score: 57.8 bits (138), Expect = 1.54e-07 Identity = 30/69 (43.48%), Postives = 45/69 (65.22%), Query Frame = 0
BLAST of Chy2G040580.1 vs. NCBI nr
Match: XP_038902322.1 (protein PXR1-like [Benincasa hispida]) HSP 1 Score: 56.6 bits (135), Expect = 1.83e-07 Identity = 28/63 (44.44%), Postives = 42/63 (66.67%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
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