Chy1G010780.1 (mRNA) Cucumber (hystrix) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGTTTCTCCATGATGGGTTCTTCGGGATGTGAAATTTTGATCCGAAATTCTCACCAGAAGACTGTGAAGTTACAGTTGTTCCATGAAAAAGAGAAGAAGATGATGTTCAAGTTCTCCAAATCTGGCTGTAACCCTGCGAGAGCTCTCCTTAGTAAGCATGAAGCAATTGAGTTTGAAGAGAGGACAAGTCCCATCGAGGTGCTTTCACTTTCCCCACACTTTTTGAATCTTGTATTTGTTTCTTCTGAAACCTCATGGTTACTTGGATTTACTTTTTATTCTATGATATGTGAATTAGAAAAGTCTATTTCTAGTAAATATATCAATGAGGACAAAGTGTCCAGATCCATGGGATTCAGAAGAAACTACGGTTATTGTCTGTTTCAGTACATGGGATTTGTTCGGTTTTTGAAGTTATGGAACTGAAATAATGTTAAGAGTTTTAACATATTTTAGCCTTTTCTGCTGGGCTGTCATTGTGTTGTTATTTCCATCTCCCCATCTCCCCATTTCCTTGATTGTGGAATTCAATGAAGCATTCTTAGAATTGGATCGGTTTTAGTTAAAATCTAAGAGTTCAGAATCAAGTTGGTTCTACCTTAATTTGACTATACCAATGTGTCTTACTTTTTTGCTTGTTCCTTGTAGAAAAGGAAATCAATAGATCTATTACTACTTAATGATTCAACCGATCTCCTGTTTTTGGTGAAAGGCCAAGAGAGGATCTAACTCGATCACGAGAGAGAACACGGAGAAATAACCATAATTCAAATACCTGGGATAAGGATTTCCTGAACTCGAATAAGAAGTTTCCATTGGTCATGTTTTCTTTTTTCTTGATACGTTCATGACACATAGGTCAAAGTTAGTTGCTCACTGCATAAAGAGATTGTATATTTCTTGCTAGGGATGTCAGTCAGTTCACTGTTTCCTTTTTTCTTTGTGGTGGCAGGCGTCAGTTGTGCATCTTGAATATGTCATTTGTACTTTTATCTTTTATGCTTTGCTAGTGAAATATGACAGTTTATATTTGATTCTATCTTTCTTAATGAAGTTTATTATCTTTAGATTTAATCTTTAAAGGTTAAAACATCTTTTAATTTTAACAATGACTTGTTTATTCCATCACTTTGGACTGTAAACTTGAACAGGGATGAAAATAGTACCCCTCTTGTAGTCGAGCTGCTGTTGTTTAGAGATTTGTTATTTCGTTTACGTCTTTAAGTGTTCCAATGGCTTGGTAAGACAGACTAATTATGTAGGTGCCAGTTTATGTTGAGTATTTATTATGGTTGGGTTTGAGCATTCTTGGTTTGGGTATTGGCATCGTCTTGTGCCCTTTTGTGACTATTTGGCTTTTGAAACTTTTTAACTTGATTTTGAAGAGAATATTACTCTCATATTTAATTTAATTTAACTTCCAGCTAACTATGAGAGTGAACAGTGAGTTGTTTCCTTGATTTGATTTTTTCTTTGTAATACAATCATTGAGTGAACAGTAAGCTGTGTCCTGATTGAGGTCTTGGATATTGTTTTACCTAGCCTAATAGTTGTTTATCTATTGTCTTCTGCTGTATTCAAGGTCAGAACGGAGATATCAAAATGCTATGAATTAATAAACAGACTAGGGAAAGGAGTTGTTTATCTTGGATCTTCAAGAATGGGGCCGGATCATGCTCATTACAAGCAAGCTTTCGAATTGAGTAGAGAGGTAACCTATTTTCCATCTTTATCTTTAATTTTAGAGGAAAACACAGAACGGTAAACTGATCGATACCAAAGTTCAATCCTTTCAGTTGGGTTGAATGTTGAGGAACAGAACATCCAAGTTAGTTGCATATGTAACCTTTGACTGTACGAGTATTTCTCGATCCATGCTATGCAGATTTCAGAACTTTTGGATTGCACTACTTGGTCAGGTGTCGGTCCGGGTCTTATGGATGCGGTGACAAAAGGTGCTTTACAGGCAGGAAACCCCGTAGGCGGATTCAAAATCGGTAGAGAATCTGGTGAATGGACATCCTCAAAGTTTCATCCATACCTACCTACAGAAACTTATTTTACTTGCAGGTGATAGAGCTATATTCCATTAGTTATCTGATAGTCATAGTACATAGAGAACAATGCTGCTTGAAATGCTTTATATAATGCAGGTTCTTCTCTGCAAGAAAGCACGGGCTTGTCGATGCTGCAGTTAGAAGCTGTAGTTCTGATAGGACTGCTTTTGTTACTCTTCCCGGCGGCATTGGTACTTTCGATGAGGTGTTTGAGATTCTAGCTTTGATTCAGCTTAGAAGGATAGGGTCAAAACTTCCAGTTCCGTTCCTATTGATGAACTACGACTCTTTCTACTCGAAGTTACTCGAATTTTTTAACGATTGTGAAAACTGGGGTACCTTGGCAAAGGGAGAGGTCGATTCTCTTTGGAAGGTCTGTGACAATAACGCGGAAGCTGTGGCGTACTTGTCTAGTTTTTACAGTTTGTGTGATCATGATAGAGTGAAGAATGAAGTTGGATTGGAAAGCACACATTGA ATGAGTTTCTCCATGATGGGTTCTTCGGGATGTGAAATTTTGATCCGAAATTCTCACCAGAAGACTGTGAAGTTACAGTTGTTCCATGAAAAAGAGAAGAAGATGATGTTCAAGTTCTCCAAATCTGGCTGTAACCCTGCGAGAGCTCTCCTTAGTAAGCATGAAGCAATTGAGTTTGAAGAGAGGACAAGTCCCATCGAGGTCAGAACGGAGATATCAAAATGCTATGAATTAATAAACAGACTAGGGAAAGGAGTTGTTTATCTTGGATCTTCAAGAATGGGGCCGGATCATGCTCATTACAAGCAAGCTTTCGAATTGAGTAGAGAGATTTCAGAACTTTTGGATTGCACTACTTGGTCAGGTGTCGGTCCGGGTCTTATGGATGCGGTGACAAAAGGTGCTTTACAGGCAGGAAACCCCGTAGGCGGATTCAAAATCGGTAGAGAATCTGGTGAATGGACATCCTCAAAGTTTCATCCATACCTACCTACAGAAACTTATTTTACTTGCAGGTTCTTCTCTGCAAGAAAGCACGGGCTTGTCGATGCTGCAGTTAGAAGCTGTAGTTCTGATAGGACTGCTTTTGTTACTCTTCCCGGCGGCATTGGTACTTTCGATGAGGTGTTTGAGATTCTAGCTTTGATTCAGCTTAGAAGGATAGGGTCAAAACTTCCAGTTCCGTTCCTATTGATGAACTACGACTCTTTCTACTCGAAGTTACTCGAATTTTTTAACGATTGTGAAAACTGGGGTACCTTGGCAAAGGGAGAGGTCGATTCTCTTTGGAAGGTCTGTGACAATAACGCGGAAGCTGTGGCGTACTTGTCTAGTTTTTACAGTTTGTGTGATCATGATAGAGTGAAGAATGAAGTTGGATTGGAAAGCACACATTGA ATGAGTTTCTCCATGATGGGTTCTTCGGGATGTGAAATTTTGATCCGAAATTCTCACCAGAAGACTGTGAAGTTACAGTTGTTCCATGAAAAAGAGAAGAAGATGATGTTCAAGTTCTCCAAATCTGGCTGTAACCCTGCGAGAGCTCTCCTTAGTAAGCATGAAGCAATTGAGTTTGAAGAGAGGACAAGTCCCATCGAGGTCAGAACGGAGATATCAAAATGCTATGAATTAATAAACAGACTAGGGAAAGGAGTTGTTTATCTTGGATCTTCAAGAATGGGGCCGGATCATGCTCATTACAAGCAAGCTTTCGAATTGAGTAGAGAGATTTCAGAACTTTTGGATTGCACTACTTGGTCAGGTGTCGGTCCGGGTCTTATGGATGCGGTGACAAAAGGTGCTTTACAGGCAGGAAACCCCGTAGGCGGATTCAAAATCGGTAGAGAATCTGGTGAATGGACATCCTCAAAGTTTCATCCATACCTACCTACAGAAACTTATTTTACTTGCAGGTTCTTCTCTGCAAGAAAGCACGGGCTTGTCGATGCTGCAGTTAGAAGCTGTAGTTCTGATAGGACTGCTTTTGTTACTCTTCCCGGCGGCATTGGTACTTTCGATGAGGTGTTTGAGATTCTAGCTTTGATTCAGCTTAGAAGGATAGGGTCAAAACTTCCAGTTCCGTTCCTATTGATGAACTACGACTCTTTCTACTCGAAGTTACTCGAATTTTTTAACGATTGTGAAAACTGGGGTACCTTGGCAAAGGGAGAGGTCGATTCTCTTTGGAAGGTCTGTGACAATAACGCGGAAGCTGTGGCGTACTTGTCTAGTTTTTACAGTTTGTGTGATCATGATAGAGTGAAGAATGAAGTTGGATTGGAAAGCACACATTGA MSFSMMGSSGCEILIRNSHQKTVKLQLFHEKEKKMMFKFSKSGCNPARALLSKHEAIEFEERTSPIEVRTEISKCYELINRLGKGVVYLGSSRMGPDHAHYKQAFELSREISELLDCTTWSGVGPGLMDAVTKGALQAGNPVGGFKIGRESGEWTSSKFHPYLPTETYFTCRFFSARKHGLVDAAVRSCSSDRTAFVTLPGGIGTFDEVFEILALIQLRRIGSKLPVPFLLMNYDSFYSKLLEFFNDCENWGTLAKGEVDSLWKVCDNNAEAVAYLSSFYSLCDHDRVKNEVGLESTH* Homology
BLAST of Chy1G010780.1 vs. ExPASy Swiss-Prot
Match: Q7XDB8 (Probable cytokinin riboside 5'-monophosphate phosphoribohydrolase LOGL10 OS=Oryza sativa subsp. japonica OX=39947 GN=LOGL10 PE=2 SV=1) HSP 1 Score: 53.5 bits (127), Expect = 4.7e-06 Identity = 57/225 (25.33%), Postives = 89/225 (39.56%), Query Frame = 0
BLAST of Chy1G010780.1 vs. ExPASy Swiss-Prot
Match: Q8H7U8 (Probable cytokinin riboside 5'-monophosphate phosphoribohydrolase LOGL3 OS=Oryza sativa subsp. japonica OX=39947 GN=LOGL3 PE=2 SV=1) HSP 1 Score: 52.0 bits (123), Expect = 1.4e-05 Identity = 57/225 (25.33%), Postives = 90/225 (40.00%), Query Frame = 0
BLAST of Chy1G010780.1 vs. ExPASy Swiss-Prot
Match: Q84M85 (Probable cytokinin riboside 5'-monophosphate phosphoribohydrolase LOGL5 OS=Oryza sativa subsp. japonica OX=39947 GN=LOGL5 PE=2 SV=1) HSP 1 Score: 50.8 bits (120), Expect = 3.0e-05 Identity = 52/195 (26.67%), Postives = 84/195 (43.08%), Query Frame = 0
BLAST of Chy1G010780.1 vs. ExPASy Swiss-Prot
Match: P47044 (LOG family protein YJL055W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=YJL055W PE=1 SV=1) HSP 1 Score: 49.7 bits (117), Expect = 6.8e-05 Identity = 29/67 (43.28%), Postives = 39/67 (58.21%), Query Frame = 0
BLAST of Chy1G010780.1 vs. ExPASy Swiss-Prot
Match: Q0JBP5 (Probable cytokinin riboside 5'-monophosphate phosphoribohydrolase LOGL6 OS=Oryza sativa subsp. japonica OX=39947 GN=LOGL6 PE=2 SV=1) HSP 1 Score: 47.4 bits (111), Expect = 3.4e-04 Identity = 46/169 (27.22%), Postives = 72/169 (42.60%), Query Frame = 0
BLAST of Chy1G010780.1 vs. ExPASy TrEMBL
Match: A0A0A0LEH2 (Cytokinin riboside 5'-monophosphate phosphoribohydrolase OS=Cucumis sativus OX=3659 GN=Csa_3G764560 PE=3 SV=1) HSP 1 Score: 605.5 bits (1560), Expect = 1.2e-169 Identity = 293/298 (98.32%), Postives = 296/298 (99.33%), Query Frame = 0
BLAST of Chy1G010780.1 vs. ExPASy TrEMBL
Match: A0A1S3CI23 (Cytokinin riboside 5'-monophosphate phosphoribohydrolase OS=Cucumis melo OX=3656 GN=LOC103501221 PE=3 SV=1) HSP 1 Score: 591.3 bits (1523), Expect = 2.3e-165 Identity = 286/298 (95.97%), Postives = 291/298 (97.65%), Query Frame = 0
BLAST of Chy1G010780.1 vs. ExPASy TrEMBL
Match: A0A5A7U1S7 (Cytokinin riboside 5'-monophosphate phosphoribohydrolase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold265G002260 PE=3 SV=1) HSP 1 Score: 589.0 bits (1517), Expect = 1.1e-164 Identity = 285/298 (95.64%), Postives = 290/298 (97.32%), Query Frame = 0
BLAST of Chy1G010780.1 vs. ExPASy TrEMBL
Match: A0A6J1CD94 (Cytokinin riboside 5'-monophosphate phosphoribohydrolase OS=Momordica charantia OX=3673 GN=LOC111010604 PE=3 SV=1) HSP 1 Score: 558.1 bits (1437), Expect = 2.2e-155 Identity = 265/298 (88.93%), Postives = 286/298 (95.97%), Query Frame = 0
BLAST of Chy1G010780.1 vs. ExPASy TrEMBL
Match: A0A6J1FBW4 (Cytokinin riboside 5'-monophosphate phosphoribohydrolase OS=Cucurbita moschata OX=3662 GN=LOC111442691 PE=3 SV=1) HSP 1 Score: 547.7 bits (1410), Expect = 2.9e-152 Identity = 262/282 (92.91%), Postives = 275/282 (97.52%), Query Frame = 0
BLAST of Chy1G010780.1 vs. NCBI nr
Match: XP_004151464.1 (uncharacterized protein LOC101207783 isoform X1 [Cucumis sativus]) HSP 1 Score: 598 bits (1543), Expect = 7.86e-216 Identity = 293/298 (98.32%), Postives = 296/298 (99.33%), Query Frame = 0
BLAST of Chy1G010780.1 vs. NCBI nr
Match: KAE8645995.1 (hypothetical protein Csa_015489 [Cucumis sativus]) HSP 1 Score: 589 bits (1519), Expect = 2.97e-212 Identity = 288/293 (98.29%), Postives = 291/293 (99.32%), Query Frame = 0
BLAST of Chy1G010780.1 vs. NCBI nr
Match: XP_008462958.1 (PREDICTED: uncharacterized protein LOC103501221 isoform X1 [Cucumis melo]) HSP 1 Score: 584 bits (1506), Expect = 3.44e-210 Identity = 286/298 (95.97%), Postives = 291/298 (97.65%), Query Frame = 0
BLAST of Chy1G010780.1 vs. NCBI nr
Match: KAA0048186.1 (putative cytokinin riboside 5'-monophosphate phosphoribohydrolase LOGL10 [Cucumis melo var. makuwa] >TYK08072.1 putative cytokinin riboside 5'-monophosphate phosphoribohydrolase LOGL10 [Cucumis melo var. makuwa]) HSP 1 Score: 582 bits (1500), Expect = 2.82e-209 Identity = 285/298 (95.64%), Postives = 290/298 (97.32%), Query Frame = 0
BLAST of Chy1G010780.1 vs. NCBI nr
Match: XP_038896186.1 (uncharacterized protein LOC120084471 isoform X1 [Benincasa hispida]) HSP 1 Score: 572 bits (1474), Expect = 2.59e-205 Identity = 279/297 (93.94%), Postives = 288/297 (96.97%), Query Frame = 0
BLAST of Chy1G010780.1 vs. TAIR 10
Match: AT1G50575.1 (Putative lysine decarboxylase family protein ) HSP 1 Score: 343.2 bits (879), Expect = 2.1e-94 Identity = 159/239 (66.53%), Postives = 198/239 (82.85%), Query Frame = 0
BLAST of Chy1G010780.1 vs. TAIR 10
Match: AT2G35990.1 (Putative lysine decarboxylase family protein ) HSP 1 Score: 46.6 bits (109), Expect = 4.1e-05 Identity = 46/177 (25.99%), Postives = 71/177 (40.11%), Query Frame = 0
BLAST of Chy1G010780.1 vs. TAIR 10
Match: AT5G06300.1 (Putative lysine decarboxylase family protein ) HSP 1 Score: 45.8 bits (107), Expect = 6.9e-05 Identity = 47/181 (25.97%), Postives = 73/181 (40.33%), Query Frame = 0
BLAST of Chy1G010780.1 vs. TAIR 10
Match: AT3G53450.1 (Putative lysine decarboxylase family protein ) HSP 1 Score: 45.4 bits (106), Expect = 9.1e-05 Identity = 46/176 (26.14%), Postives = 72/176 (40.91%), Query Frame = 0
BLAST of Chy1G010780.1 vs. TAIR 10
Match: AT2G35990.2 (Putative lysine decarboxylase family protein ) HSP 1 Score: 43.9 bits (102), Expect = 2.6e-04 Identity = 25/58 (43.10%), Postives = 34/58 (58.62%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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