Chy1G006580.1 (mRNA) Cucumber (hystrix) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGTCTCTGATCAACGCTTCTTCTGCTGGGATCGTTTCCTCTTCTTCCTCTTTTCCTATATCTTCTCCTATCAGGAACCTTCCTCTGAGATCTTTCCAAGTTCCGCACGCCTCTAAAGGTATTCATCGCTGAGTTCTTTTCCAGTTTCTGTTTCTTCTATTTCTTTGCTTTTTTGTAACTAAGGATCGATGAAGTCGGCAGGGTTGCTTCTTGTGGGAGCTGAACGAATCCTTCTTATCGTTTGACTTTGATTAGTGTTCGAAGCTATTTTTTGTGTTATTTGTTTCTTATTTTTTATTTTGAGTTTCCTGCTTATGTCTTGGCATGTGTGTTTAGGTAACGACAACGAATCTGATTCTCAGTCTGATTCGAAGAATACCAGGAACCTTCCAATCCTCAGTAAACGGCATCTCTCCCTTTCTCCTCTTTCCAAGGTATTATCTCTGTCTATTATTATTATTATTATGAAATTTAATGCTCTCTTTGTTTGATTTCTGCAAATTTGAGATCATCAGATATATGGTTGTTTTGTTTTCCATTCGATCTTTTTAAAGCTTCCAGTAAACATTTTTCTGTTTGTTTTACTTTATACATTAGGATGTTGCAATGGGAATGGTGCTTGGTGCAGCCACGGGAAGAGGGTGGACGACAGGGTCTGGTATGGAAGGTCCCCCAGCTCCGGCTGGGCTGGAAGCCAAATCAGGCACAGAGAATGTATCCACTTTCCCATGGTCTCTTTTCACAAAATCTCCTCGGCGAAGAATGCTTGTGGCTTTTACTTGTAACATTTGTGGGCAACGAACAACACGGGCGATTAACCCCCATGCTTATACTGATGGCACTGTATTTGTGCAGGTAAAAGATTTTGCAACATTCATGTAATGAATTGATGGAAGTCCATATCTGACTATTTGAGTTTGAGTAGAATGGAAGCATATAATTCCTTTTTTTTTTTTCTTTTTGTTTGTGGTTTCTACTGAAATTGTTTCATTCAATGCTCTCTTTTGGGGGAAGGATTGACGTCAATGAAATCAAAATCTGAGCATCACACAGTATTGATAGCCGCCTAACGAGTCTTTTGCATCTAATTGGTTGATAGAACCCTAGTTATGGATGTATATTACGATTATTTGTTAGTTAGTGATGACATACTAGTAATTAGTTAGGGAGTTGGTTATGTTTTTTTATCATAAATAGAGGCAGTAGATTTGGAGCAAGGGAAAAGTAATTTTAATAGGAGTTTCCATCGCATGACTCTCGAATGGGTCTCATATACTGGAACTTCTCTTGATGTTGTAATATATTACTATCCTTGAGTTATTTGTGTTTCTTTGAGTTCTTTAGGTGGGATCCTATCATATTCTCTCTGCTATTTTAGTTGTTACATGCTAGGTCCTATAAAGTTTGTTGCTAAGCAGTCGTGGGTAGGCAATCTGAATTAAATTTGGCTGTAAAAACAATTTATGAATTGACATGAAATTCATCAGCTTACTTTTTTGTTTCATTATTATAGTGTTGTGGATGCAACGCATACCACAAGCTCGTGGACAACTTGAACCTATTTCATGAGATGAAATGCTACATCAACCCGAGTTTTAACTATGGGAGTAATGGATGGGGTGATGTGAACTTCAAATATCTGGATGTGGAAGATGGAAACGACGATGTTTTCCCAATACAATGA ATGGAGTCTCTGATCAACGCTTCTTCTGCTGGGATCGTTTCCTCTTCTTCCTCTTTTCCTATATCTTCTCCTATCAGGAACCTTCCTCTGAGATCTTTCCAAGTTCCGCACGCCTCTAAAGGTAACGACAACGAATCTGATTCTCAGTCTGATTCGAAGAATACCAGGAACCTTCCAATCCTCAGTAAACGGCATCTCTCCCTTTCTCCTCTTTCCAAGGATGTTGCAATGGGAATGGTGCTTGGTGCAGCCACGGGAAGAGGGTGGACGACAGGGTCTGGTATGGAAGGTCCCCCAGCTCCGGCTGGGCTGGAAGCCAAATCAGGCACAGAGAATGTATCCACTTTCCCATGGTCTCTTTTCACAAAATCTCCTCGGCGAAGAATGCTTGTGGCTTTTACTTGTAACATTTGTGGGCAACGAACAACACGGGCGATTAACCCCCATGCTTATACTGATGGCACTGTATTTGTGCAGTGTTGTGGATGCAACGCATACCACAAGCTCGTGGACAACTTGAACCTATTTCATGAGATGAAATGCTACATCAACCCGAGTTTTAACTATGGGAGTAATGGATGGGGTGATGTGAACTTCAAATATCTGGATGTGGAAGATGGAAACGACGATGTTTTCCCAATACAATGA ATGGAGTCTCTGATCAACGCTTCTTCTGCTGGGATCGTTTCCTCTTCTTCCTCTTTTCCTATATCTTCTCCTATCAGGAACCTTCCTCTGAGATCTTTCCAAGTTCCGCACGCCTCTAAAGGTAACGACAACGAATCTGATTCTCAGTCTGATTCGAAGAATACCAGGAACCTTCCAATCCTCAGTAAACGGCATCTCTCCCTTTCTCCTCTTTCCAAGGATGTTGCAATGGGAATGGTGCTTGGTGCAGCCACGGGAAGAGGGTGGACGACAGGGTCTGGTATGGAAGGTCCCCCAGCTCCGGCTGGGCTGGAAGCCAAATCAGGCACAGAGAATGTATCCACTTTCCCATGGTCTCTTTTCACAAAATCTCCTCGGCGAAGAATGCTTGTGGCTTTTACTTGTAACATTTGTGGGCAACGAACAACACGGGCGATTAACCCCCATGCTTATACTGATGGCACTGTATTTGTGCAGTGTTGTGGATGCAACGCATACCACAAGCTCGTGGACAACTTGAACCTATTTCATGAGATGAAATGCTACATCAACCCGAGTTTTAACTATGGGAGTAATGGATGGGGTGATGTGAACTTCAAATATCTGGATGTGGAAGATGGAAACGACGATGTTTTCCCAATACAATGA MESLINASSAGIVSSSSSFPISSPIRNLPLRSFQVPHASKGNDNESDSQSDSKNTRNLPILSKRHLSLSPLSKDVAMGMVLGAATGRGWTTGSGMEGPPAPAGLEAKSGTENVSTFPWSLFTKSPRRRMLVAFTCNICGQRTTRAINPHAYTDGTVFVQCCGCNAYHKLVDNLNLFHEMKCYINPSFNYGSNGWGDVNFKYLDVEDGNDDVFPIQ* Homology
BLAST of Chy1G006580.1 vs. ExPASy Swiss-Prot
Match: B3LPE4 (Mitochondrial protein import protein ZIM17 OS=Saccharomyces cerevisiae (strain RM11-1a) OX=285006 GN=ZIM17 PE=3 SV=2) HSP 1 Score: 54.7 bits (130), Expect = 1.5e-06 Identity = 28/93 (30.11%), Postives = 48/93 (51.61%), Query Frame = 0
BLAST of Chy1G006580.1 vs. ExPASy Swiss-Prot
Match: B5VQB0 (Mitochondrial protein import protein ZIM17 OS=Saccharomyces cerevisiae (strain AWRI1631) OX=545124 GN=ZIM17 PE=3 SV=2) HSP 1 Score: 54.7 bits (130), Expect = 1.5e-06 Identity = 28/93 (30.11%), Postives = 48/93 (51.61%), Query Frame = 0
BLAST of Chy1G006580.1 vs. ExPASy Swiss-Prot
Match: A6ZSH0 (Mitochondrial protein import protein ZIM17 OS=Saccharomyces cerevisiae (strain YJM789) OX=307796 GN=ZIM17 PE=3 SV=2) HSP 1 Score: 54.7 bits (130), Expect = 1.5e-06 Identity = 28/93 (30.11%), Postives = 48/93 (51.61%), Query Frame = 0
BLAST of Chy1G006580.1 vs. ExPASy Swiss-Prot
Match: P42844 (Mitochondrial protein import protein ZIM17 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=ZIM17 PE=1 SV=2) HSP 1 Score: 54.7 bits (130), Expect = 1.5e-06 Identity = 28/93 (30.11%), Postives = 48/93 (51.61%), Query Frame = 0
BLAST of Chy1G006580.1 vs. ExPASy Swiss-Prot
Match: Q9D113 (DNL-type zinc finger protein OS=Mus musculus OX=10090 GN=Dnlz PE=1 SV=1) HSP 1 Score: 53.1 bits (126), Expect = 4.4e-06 Identity = 20/50 (40.00%), Postives = 32/50 (64.00%), Query Frame = 0
BLAST of Chy1G006580.1 vs. ExPASy TrEMBL
Match: A0A0A0K614 (DNL-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G016610 PE=4 SV=1) HSP 1 Score: 431.0 bits (1107), Expect = 2.9e-117 Identity = 213/216 (98.61%), Postives = 214/216 (99.07%), Query Frame = 0
BLAST of Chy1G006580.1 vs. ExPASy TrEMBL
Match: A0A5D3D712 (Mitochondrial protein import protein ZIM17 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold3037G00120 PE=4 SV=1) HSP 1 Score: 424.9 bits (1091), Expect = 2.1e-115 Identity = 210/216 (97.22%), Postives = 211/216 (97.69%), Query Frame = 0
BLAST of Chy1G006580.1 vs. ExPASy TrEMBL
Match: A0A1S3BII6 (uncharacterized protein LOC103490262 OS=Cucumis melo OX=3656 GN=LOC103490262 PE=4 SV=1) HSP 1 Score: 424.9 bits (1091), Expect = 2.1e-115 Identity = 210/216 (97.22%), Postives = 211/216 (97.69%), Query Frame = 0
BLAST of Chy1G006580.1 vs. ExPASy TrEMBL
Match: A0A6J1GM10 (uncharacterized protein LOC111455528 OS=Cucurbita moschata OX=3662 GN=LOC111455528 PE=4 SV=1) HSP 1 Score: 408.7 bits (1049), Expect = 1.5e-110 Identity = 199/216 (92.13%), Postives = 206/216 (95.37%), Query Frame = 0
BLAST of Chy1G006580.1 vs. ExPASy TrEMBL
Match: A0A6J1HYG2 (uncharacterized protein LOC111468074 OS=Cucurbita maxima OX=3661 GN=LOC111468074 PE=4 SV=1) HSP 1 Score: 407.9 bits (1047), Expect = 2.6e-110 Identity = 199/216 (92.13%), Postives = 206/216 (95.37%), Query Frame = 0
BLAST of Chy1G006580.1 vs. NCBI nr
Match: XP_004144863.1 (uncharacterized protein LOC101212325 [Cucumis sativus] >KGN43276.1 hypothetical protein Csa_020164 [Cucumis sativus]) HSP 1 Score: 432 bits (1110), Expect = 1.38e-152 Identity = 213/216 (98.61%), Postives = 214/216 (99.07%), Query Frame = 0
BLAST of Chy1G006580.1 vs. NCBI nr
Match: XP_008447918.1 (PREDICTED: uncharacterized protein LOC103490262 [Cucumis melo] >KAA0025115.1 Mitochondrial protein import protein ZIM17 [Cucumis melo var. makuwa] >TYK19358.1 Mitochondrial protein import protein ZIM17 [Cucumis melo var. makuwa]) HSP 1 Score: 426 bits (1094), Expect = 3.81e-150 Identity = 210/216 (97.22%), Postives = 211/216 (97.69%), Query Frame = 0
BLAST of Chy1G006580.1 vs. NCBI nr
Match: XP_022953012.1 (uncharacterized protein LOC111455528 [Cucurbita moschata] >KAG6572131.1 hypothetical protein SDJN03_28859, partial [Cucurbita argyrosperma subsp. sororia] >KAG7011787.1 ZIM17 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 409 bits (1052), Expect = 9.64e-144 Identity = 199/216 (92.13%), Postives = 206/216 (95.37%), Query Frame = 0
BLAST of Chy1G006580.1 vs. NCBI nr
Match: XP_023511505.1 (uncharacterized protein LOC111776313 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 409 bits (1050), Expect = 1.95e-143 Identity = 199/216 (92.13%), Postives = 206/216 (95.37%), Query Frame = 0
BLAST of Chy1G006580.1 vs. NCBI nr
Match: XP_022968890.1 (uncharacterized protein LOC111468074 [Cucurbita maxima]) HSP 1 Score: 409 bits (1050), Expect = 2.84e-142 Identity = 199/216 (92.13%), Postives = 206/216 (95.37%), Query Frame = 0
BLAST of Chy1G006580.1 vs. TAIR 10
Match: AT5G27280.1 (Zim17-type zinc finger protein ) HSP 1 Score: 204.5 bits (519), Expect = 8.4e-53 Identity = 121/225 (53.78%), Postives = 147/225 (65.33%), Query Frame = 0
BLAST of Chy1G006580.1 vs. TAIR 10
Match: AT1G68730.1 (Zim17-type zinc finger protein ) HSP 1 Score: 79.3 bits (194), Expect = 4.1e-15 Identity = 37/60 (61.67%), Postives = 41/60 (68.33%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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