Chy1G006580 (gene) Cucumber (hystrix) v1

Overview


Name	Chy1G006580
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	DNL-type domain-containing protein
Location	chrH01: 4707315 .. 4709001 (+)
RNA-Seq Expression	Chy1G006580
Synteny	Chy1G006580

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGTCTCTGATCAACGCTTCTTCTGCTGGGATCGTTTCCTCTTCTTCCTCTTTTCCTATATCTTCTCCTATCAGGAACCTTCCTCTGAGATCTTTCCAAGTTCCGCACGCCTCTAAAGGTATTCATCGCTGAGTTCTTTTCCAGTTTCTGTTTCTTCTATTTCTTTGCTTTTTTGTAACTAAGGATCGATGAAGTCGGCAGGGTTGCTTCTTGTGGGAGCTGAACGAATCCTTCTTATCGTTTGACTTTGATTAGTGTTCGAAGCTATTTTTTGTGTTATTTGTTTCTTATTTTTTATTTTGAGTTTCCTGCTTATGTCTTGGCATGTGTGTTTAGGTAACGACAACGAATCTGATTCTCAGTCTGATTCGAAGAATACCAGGAACCTTCCAATCCTCAGTAAACGGCATCTCTCCCTTTCTCCTCTTTCCAAGGTATTATCTCTGTCTATTATTATTATTATTATGAAATTTAATGCTCTCTTTGTTTGATTTCTGCAAATTTGAGATCATCAGATATATGGTTGTTTTGTTTTCCATTCGATCTTTTTAAAGCTTCCAGTAAACATTTTTCTGTTTGTTTTACTTTATACATTAGGATGTTGCAATGGGAATGGTGCTTGGTGCAGCCACGGGAAGAGGGTGGACGACAGGGTCTGGTATGGAAGGTCCCCCAGCTCCGGCTGGGCTGGAAGCCAAATCAGGCACAGAGAATGTATCCACTTTCCCATGGTCTCTTTTCACAAAATCTCCTCGGCGAAGAATGCTTGTGGCTTTTACTTGTAACATTTGTGGGCAACGAACAACACGGGCGATTAACCCCCATGCTTATACTGATGGCACTGTATTTGTGCAGGTAAAAGATTTTGCAACATTCATGTAATGAATTGATGGAAGTCCATATCTGACTATTTGAGTTTGAGTAGAATGGAAGCATATAATTCCTTTTTTTTTTTTCTTTTTGTTTGTGGTTTCTACTGAAATTGTTTCATTCAATGCTCTCTTTTGGGGGAAGGATTGACGTCAATGAAATCAAAATCTGAGCATCACACAGTATTGATAGCCGCCTAACGAGTCTTTTGCATCTAATTGGTTGATAGAACCCTAGTTATGGATGTATATTACGATTATTTGTTAGTTAGTGATGACATACTAGTAATTAGTTAGGGAGTTGGTTATGTTTTTTTATCATAAATAGAGGCAGTAGATTTGGAGCAAGGGAAAAGTAATTTTAATAGGAGTTTCCATCGCATGACTCTCGAATGGGTCTCATATACTGGAACTTCTCTTGATGTTGTAATATATTACTATCCTTGAGTTATTTGTGTTTCTTTGAGTTCTTTAGGTGGGATCCTATCATATTCTCTCTGCTATTTTAGTTGTTACATGCTAGGTCCTATAAAGTTTGTTGCTAAGCAGTCGTGGGTAGGCAATCTGAATTAAATTTGGCTGTAAAAACAATTTATGAATTGACATGAAATTCATCAGCTTACTTTTTTGTTTCATTATTATAGTGTTGTGGATGCAACGCATACCACAAGCTCGTGGACAACTTGAACCTATTTCATGAGATGAAATGCTACATCAACCCGAGTTTTAACTATGGGAGTAATGGATGGGGTGATGTGAACTTCAAATATCTGGATGTGGAAGATGGAAACGACGATGTTTTCCCAATACAATGA

mRNA sequence

ATGGAGTCTCTGATCAACGCTTCTTCTGCTGGGATCGTTTCCTCTTCTTCCTCTTTTCCTATATCTTCTCCTATCAGGAACCTTCCTCTGAGATCTTTCCAAGTTCCGCACGCCTCTAAAGGTAACGACAACGAATCTGATTCTCAGTCTGATTCGAAGAATACCAGGAACCTTCCAATCCTCAGTAAACGGCATCTCTCCCTTTCTCCTCTTTCCAAGGATGTTGCAATGGGAATGGTGCTTGGTGCAGCCACGGGAAGAGGGTGGACGACAGGGTCTGGTATGGAAGGTCCCCCAGCTCCGGCTGGGCTGGAAGCCAAATCAGGCACAGAGAATGTATCCACTTTCCCATGGTCTCTTTTCACAAAATCTCCTCGGCGAAGAATGCTTGTGGCTTTTACTTGTAACATTTGTGGGCAACGAACAACACGGGCGATTAACCCCCATGCTTATACTGATGGCACTGTATTTGTGCAGTGTTGTGGATGCAACGCATACCACAAGCTCGTGGACAACTTGAACCTATTTCATGAGATGAAATGCTACATCAACCCGAGTTTTAACTATGGGAGTAATGGATGGGGTGATGTGAACTTCAAATATCTGGATGTGGAAGATGGAAACGACGATGTTTTCCCAATACAATGA

Coding sequence (CDS)

ATGGAGTCTCTGATCAACGCTTCTTCTGCTGGGATCGTTTCCTCTTCTTCCTCTTTTCCTATATCTTCTCCTATCAGGAACCTTCCTCTGAGATCTTTCCAAGTTCCGCACGCCTCTAAAGGTAACGACAACGAATCTGATTCTCAGTCTGATTCGAAGAATACCAGGAACCTTCCAATCCTCAGTAAACGGCATCTCTCCCTTTCTCCTCTTTCCAAGGATGTTGCAATGGGAATGGTGCTTGGTGCAGCCACGGGAAGAGGGTGGACGACAGGGTCTGGTATGGAAGGTCCCCCAGCTCCGGCTGGGCTGGAAGCCAAATCAGGCACAGAGAATGTATCCACTTTCCCATGGTCTCTTTTCACAAAATCTCCTCGGCGAAGAATGCTTGTGGCTTTTACTTGTAACATTTGTGGGCAACGAACAACACGGGCGATTAACCCCCATGCTTATACTGATGGCACTGTATTTGTGCAGTGTTGTGGATGCAACGCATACCACAAGCTCGTGGACAACTTGAACCTATTTCATGAGATGAAATGCTACATCAACCCGAGTTTTAACTATGGGAGTAATGGATGGGGTGATGTGAACTTCAAATATCTGGATGTGGAAGATGGAAACGACGATGTTTTCCCAATACAATGA

Protein sequence

MESLINASSAGIVSSSSSFPISSPIRNLPLRSFQVPHASKGNDNESDSQSDSKNTRNLPILSKRHLSLSPLSKDVAMGMVLGAATGRGWTTGSGMEGPPAPAGLEAKSGTENVSTFPWSLFTKSPRRRMLVAFTCNICGQRTTRAINPHAYTDGTVFVQCCGCNAYHKLVDNLNLFHEMKCYINPSFNYGSNGWGDVNFKYLDVEDGNDDVFPIQ*

Homology

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BLAST of Chy1G006580 vs. ExPASy Swiss-Prot
Match: B3LPE4 (Mitochondrial protein import protein ZIM17 OS=Saccharomyces cerevisiae (strain RM11-1a) OX=285006 GN=ZIM17 PE=3 SV=2)

HSP 1 Score: 54.7 bits (130), Expect = 1.5e-06
Identity = 28/93 (30.11%), Postives = 48/93 (51.61%), Query Frame = 0


Query: 123 KSPRRRMLVAFTCNICGQRTTRAINPHAYTDGTVFVQCCGCNAYHKLVDNLNLFHE---- 182
           K  + +M++AFTC  C  R++  ++  AY  GTV + C  C   H + D+L +FH+    
Sbjct: 63  KVDKPKMMIAFTCKKCNTRSSHTMSKQAYEKGTVLISCPHCKVRHLIADHLKIFHDHHVT 122

Query: 183 MKCYINPSFNYGSNGWGDVNFKYLDVEDGNDDV 212
           ++  +  +    S   GD+ F+  D+ D   DV
Sbjct: 123 VEQLMKANGEQVSQDVGDLEFE--DIPDSLKDV 153

[Close]

BLAST of Chy1G006580 vs. ExPASy Swiss-Prot
Match: B5VQB0 (Mitochondrial protein import protein ZIM17 OS=Saccharomyces cerevisiae (strain AWRI1631) OX=545124 GN=ZIM17 PE=3 SV=2)

HSP 1 Score: 54.7 bits (130), Expect = 1.5e-06
Identity = 28/93 (30.11%), Postives = 48/93 (51.61%), Query Frame = 0


Query: 123 KSPRRRMLVAFTCNICGQRTTRAINPHAYTDGTVFVQCCGCNAYHKLVDNLNLFHE---- 182
           K  + +M++AFTC  C  R++  ++  AY  GTV + C  C   H + D+L +FH+    
Sbjct: 63  KVDKPKMMIAFTCKKCNTRSSHTMSKQAYEKGTVLISCPHCKVRHLIADHLKIFHDHHVT 122

Query: 183 MKCYINPSFNYGSNGWGDVNFKYLDVEDGNDDV 212
           ++  +  +    S   GD+ F+  D+ D   DV
Sbjct: 123 VEQLMKANGEQVSQDVGDLEFE--DIPDSLKDV 153

[Close]

BLAST of Chy1G006580 vs. ExPASy Swiss-Prot
Match: A6ZSH0 (Mitochondrial protein import protein ZIM17 OS=Saccharomyces cerevisiae (strain YJM789) OX=307796 GN=ZIM17 PE=3 SV=2)

HSP 1 Score: 54.7 bits (130), Expect = 1.5e-06
Identity = 28/93 (30.11%), Postives = 48/93 (51.61%), Query Frame = 0


Query: 123 KSPRRRMLVAFTCNICGQRTTRAINPHAYTDGTVFVQCCGCNAYHKLVDNLNLFHE---- 182
           K  + +M++AFTC  C  R++  ++  AY  GTV + C  C   H + D+L +FH+    
Sbjct: 63  KVDKPKMMIAFTCKKCNTRSSHTMSKQAYEKGTVLISCPHCKVRHLIADHLKIFHDHHVT 122

Query: 183 MKCYINPSFNYGSNGWGDVNFKYLDVEDGNDDV 212
           ++  +  +    S   GD+ F+  D+ D   DV
Sbjct: 123 VEQLMKANGEQVSQDVGDLEFE--DIPDSLKDV 153

[Close]

BLAST of Chy1G006580 vs. ExPASy Swiss-Prot
Match: P42844 (Mitochondrial protein import protein ZIM17 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=ZIM17 PE=1 SV=2)

HSP 1 Score: 54.7 bits (130), Expect = 1.5e-06
Identity = 28/93 (30.11%), Postives = 48/93 (51.61%), Query Frame = 0


Query: 123 KSPRRRMLVAFTCNICGQRTTRAINPHAYTDGTVFVQCCGCNAYHKLVDNLNLFHE---- 182
           K  + +M++AFTC  C  R++  ++  AY  GTV + C  C   H + D+L +FH+    
Sbjct: 63  KVDKPKMMIAFTCKKCNTRSSHTMSKQAYEKGTVLISCPHCKVRHLIADHLKIFHDHHVT 122

Query: 183 MKCYINPSFNYGSNGWGDVNFKYLDVEDGNDDV 212
           ++  +  +    S   GD+ F+  D+ D   DV
Sbjct: 123 VEQLMKANGEQVSQDVGDLEFE--DIPDSLKDV 153

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BLAST of Chy1G006580 vs. ExPASy Swiss-Prot
Match: Q9D113 (DNL-type zinc finger protein OS=Mus musculus OX=10090 GN=Dnlz PE=1 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 4.4e-06
Identity = 20/50 (40.00%), Postives = 32/50 (64.00%), Query Frame = 0


Query: 131 VAFTCNICGQRTTRAINPHAYTDGTVFVQCCGCNAYHKLVDNLNLFHEMK 181
           + +TC +CG R+++ I+  AY  G V V C GC  +H + DNL+ F ++K
Sbjct: 75  LVYTCKVCGTRSSKRISKLAYHQGVVIVTCPGCQNHHIIADNLSWFSDLK 124

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BLAST of Chy1G006580 vs. ExPASy TrEMBL
Match: A0A0A0K614 (DNL-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G016610 PE=4 SV=1)

HSP 1 Score: 431.0 bits (1107), Expect = 2.9e-117
Identity = 213/216 (98.61%), Postives = 214/216 (99.07%), Query Frame = 0


Query: 1   MESLINASSAGIVSSSSSFPISSPIRNLPLRSFQVPHASKGNDNESDSQSDSKNTRNLPI 60
           MESLINASSAGIVSSSSSFPISSPIRNLPLRSFQVPHASKGNDNESDSQSDSKNTRNLPI
Sbjct: 1   MESLINASSAGIVSSSSSFPISSPIRNLPLRSFQVPHASKGNDNESDSQSDSKNTRNLPI 60

Query: 61  LSKRHLSLSPLSKDVAMGMVLGAATGRGWTTGSGMEGPPAPAGLEAKSGTENVSTFPWSL 120
           LSKRHLSLSPLSKDVAMGMVL AATGRGWTTGSGMEGPPAPAG+EAKSGTENVSTFPWSL
Sbjct: 61  LSKRHLSLSPLSKDVAMGMVLSAATGRGWTTGSGMEGPPAPAGMEAKSGTENVSTFPWSL 120

Query: 121 FTKSPRRRMLVAFTCNICGQRTTRAINPHAYTDGTVFVQCCGCNAYHKLVDNLNLFHEMK 180
           FTKSPRRRMLVAFTCNICGQRTTRAINPHAYTDGTVFVQCCGCNAYHKLVDNLNLFHEMK
Sbjct: 121 FTKSPRRRMLVAFTCNICGQRTTRAINPHAYTDGTVFVQCCGCNAYHKLVDNLNLFHEMK 180

Query: 181 CYINPSFNYGSNGWGDVNFKYLDV-EDGNDDVFPIQ 216
           CYINPSFNYGSNGWGDVNFKYLDV EDGNDDVFPIQ
Sbjct: 181 CYINPSFNYGSNGWGDVNFKYLDVEEDGNDDVFPIQ 216

[Close]

BLAST of Chy1G006580 vs. ExPASy TrEMBL
Match: A0A5D3D712 (Mitochondrial protein import protein ZIM17 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold3037G00120 PE=4 SV=1)

HSP 1 Score: 424.9 bits (1091), Expect = 2.1e-115
Identity = 210/216 (97.22%), Postives = 211/216 (97.69%), Query Frame = 0


Query: 1   MESLINASSAGIVSSSSSFPISSPIRNLPLRSFQVPHASKGNDNESDSQSDSKNTRNLPI 60
           MESLINASSA IVSSSSSFPISSPIRNLPLRSFQVPHASKGNDNESDSQSDS N RNLPI
Sbjct: 1   MESLINASSAAIVSSSSSFPISSPIRNLPLRSFQVPHASKGNDNESDSQSDSNNIRNLPI 60

Query: 61  LSKRHLSLSPLSKDVAMGMVLGAATGRGWTTGSGMEGPPAPAGLEAKSGTENVSTFPWSL 120
           LSKRHLSLSPLSKDVAMGMVL AATGRGWTTGSGMEGPPAPAGLEAKSGTENVSTFPWSL
Sbjct: 61  LSKRHLSLSPLSKDVAMGMVLSAATGRGWTTGSGMEGPPAPAGLEAKSGTENVSTFPWSL 120

Query: 121 FTKSPRRRMLVAFTCNICGQRTTRAINPHAYTDGTVFVQCCGCNAYHKLVDNLNLFHEMK 180
           FTKSPRRRMLVAFTCNICGQRTTRAINPHAYTDGTVFVQCCGCNAYHKLVDNLNLFHEMK
Sbjct: 121 FTKSPRRRMLVAFTCNICGQRTTRAINPHAYTDGTVFVQCCGCNAYHKLVDNLNLFHEMK 180

Query: 181 CYINPSFNYGSNGWGDVNFKYLDV-EDGNDDVFPIQ 216
           CYINPSFNYGSNGWGDVNFKYLDV EDGNDD+FPIQ
Sbjct: 181 CYINPSFNYGSNGWGDVNFKYLDVEEDGNDDIFPIQ 216

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BLAST of Chy1G006580 vs. ExPASy TrEMBL
Match: A0A1S3BII6 (uncharacterized protein LOC103490262 OS=Cucumis melo OX=3656 GN=LOC103490262 PE=4 SV=1)

HSP 1 Score: 424.9 bits (1091), Expect = 2.1e-115
Identity = 210/216 (97.22%), Postives = 211/216 (97.69%), Query Frame = 0


Query: 1   MESLINASSAGIVSSSSSFPISSPIRNLPLRSFQVPHASKGNDNESDSQSDSKNTRNLPI 60
           MESLINASSA IVSSSSSFPISSPIRNLPLRSFQVPHASKGNDNESDSQSDS N RNLPI
Sbjct: 1   MESLINASSAAIVSSSSSFPISSPIRNLPLRSFQVPHASKGNDNESDSQSDSNNIRNLPI 60

Query: 61  LSKRHLSLSPLSKDVAMGMVLGAATGRGWTTGSGMEGPPAPAGLEAKSGTENVSTFPWSL 120
           LSKRHLSLSPLSKDVAMGMVL AATGRGWTTGSGMEGPPAPAGLEAKSGTENVSTFPWSL
Sbjct: 61  LSKRHLSLSPLSKDVAMGMVLSAATGRGWTTGSGMEGPPAPAGLEAKSGTENVSTFPWSL 120

Query: 121 FTKSPRRRMLVAFTCNICGQRTTRAINPHAYTDGTVFVQCCGCNAYHKLVDNLNLFHEMK 180
           FTKSPRRRMLVAFTCNICGQRTTRAINPHAYTDGTVFVQCCGCNAYHKLVDNLNLFHEMK
Sbjct: 121 FTKSPRRRMLVAFTCNICGQRTTRAINPHAYTDGTVFVQCCGCNAYHKLVDNLNLFHEMK 180

Query: 181 CYINPSFNYGSNGWGDVNFKYLDV-EDGNDDVFPIQ 216
           CYINPSFNYGSNGWGDVNFKYLDV EDGNDD+FPIQ
Sbjct: 181 CYINPSFNYGSNGWGDVNFKYLDVEEDGNDDIFPIQ 216

[Close]

BLAST of Chy1G006580 vs. ExPASy TrEMBL
Match: A0A6J1GM10 (uncharacterized protein LOC111455528 OS=Cucurbita moschata OX=3662 GN=LOC111455528 PE=4 SV=1)

HSP 1 Score: 408.7 bits (1049), Expect = 1.5e-110
Identity = 199/216 (92.13%), Postives = 206/216 (95.37%), Query Frame = 0


Query: 1   MESLINASSAGIVSSSSSFPISSPIRNLPLRSFQVPHASKGNDNESDSQSDSKNTRNLPI 60
           MESLINASSA I+SSSSSFPISSP R LPLRSFQVPHASKGN+NESDSQSDSKN RNLPI
Sbjct: 1   MESLINASSAAIISSSSSFPISSPNRMLPLRSFQVPHASKGNENESDSQSDSKNIRNLPI 60

Query: 61  LSKRHLSLSPLSKDVAMGMVLGAATGRGWTTGSGMEGPPAPAGLEAKSGTENVSTFPWSL 120
           LS+RHLSLSPLSKD AMG+VLGAA GRGWTTGSGMEGPPAPAGLEA SGTENVSTFPWSL
Sbjct: 61  LSRRHLSLSPLSKDAAMGVVLGAAAGRGWTTGSGMEGPPAPAGLEANSGTENVSTFPWSL 120

Query: 121 FTKSPRRRMLVAFTCNICGQRTTRAINPHAYTDGTVFVQCCGCNAYHKLVDNLNLFHEMK 180
           FTKSPRRRMLVAFTCNICGQRTTRAINPHAYTDGTVFVQCCGCNAYHKLVDNLNLFHEMK
Sbjct: 121 FTKSPRRRMLVAFTCNICGQRTTRAINPHAYTDGTVFVQCCGCNAYHKLVDNLNLFHEMK 180

Query: 181 CYINPSFNYGSNGWGDVNFKYLDV-EDGNDDVFPIQ 216
           CY+NP FNYGSNGWGD+NFKYLD+ EDGNDD FPIQ
Sbjct: 181 CYVNPGFNYGSNGWGDLNFKYLDIEEDGNDDTFPIQ 216

[Close]

BLAST of Chy1G006580 vs. ExPASy TrEMBL
Match: A0A6J1HYG2 (uncharacterized protein LOC111468074 OS=Cucurbita maxima OX=3661 GN=LOC111468074 PE=4 SV=1)

HSP 1 Score: 407.9 bits (1047), Expect = 2.6e-110
Identity = 199/216 (92.13%), Postives = 206/216 (95.37%), Query Frame = 0


Query: 1   MESLINASSAGIVSSSSSFPISSPIRNLPLRSFQVPHASKGNDNESDSQSDSKNTRNLPI 60
           MESLINASSA I+SSSSSFPISSP R LPLRSFQVPHASKGN+NESDSQSDSKN RNLPI
Sbjct: 76  MESLINASSAAIISSSSSFPISSPNRMLPLRSFQVPHASKGNENESDSQSDSKNIRNLPI 135

Query: 61  LSKRHLSLSPLSKDVAMGMVLGAATGRGWTTGSGMEGPPAPAGLEAKSGTENVSTFPWSL 120
           LS+RHLSLSPLSKD AMG+VLGAA GRGWTTGSGMEGPPAPAGLEA SGTENVSTFPWSL
Sbjct: 136 LSRRHLSLSPLSKDAAMGVVLGAAAGRGWTTGSGMEGPPAPAGLEANSGTENVSTFPWSL 195

Query: 121 FTKSPRRRMLVAFTCNICGQRTTRAINPHAYTDGTVFVQCCGCNAYHKLVDNLNLFHEMK 180
           FTKSPRRRMLVAFTCNICGQRTTRAINPHAYTDGTVFVQCCGCNAYHKLVDNLNLFHEMK
Sbjct: 196 FTKSPRRRMLVAFTCNICGQRTTRAINPHAYTDGTVFVQCCGCNAYHKLVDNLNLFHEMK 255

Query: 181 CYINPSFNYGSNGWGDVNFKYLDV-EDGNDDVFPIQ 216
           CY+NP FNYGSNGWGD+NFKYLD+ EDGNDD FPIQ
Sbjct: 256 CYVNPGFNYGSNGWGDLNFKYLDMEEDGNDDTFPIQ 291

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BLAST of Chy1G006580 vs. NCBI nr
Match: XP_004144863.1 (uncharacterized protein LOC101212325 [Cucumis sativus] >KGN43276.1 hypothetical protein Csa_020164 [Cucumis sativus])

HSP 1 Score: 432 bits (1110), Expect = 1.38e-152
Identity = 213/216 (98.61%), Postives = 214/216 (99.07%), Query Frame = 0


Query: 1   MESLINASSAGIVSSSSSFPISSPIRNLPLRSFQVPHASKGNDNESDSQSDSKNTRNLPI 60
           MESLINASSAGIVSSSSSFPISSPIRNLPLRSFQVPHASKGNDNESDSQSDSKNTRNLPI
Sbjct: 1   MESLINASSAGIVSSSSSFPISSPIRNLPLRSFQVPHASKGNDNESDSQSDSKNTRNLPI 60

Query: 61  LSKRHLSLSPLSKDVAMGMVLGAATGRGWTTGSGMEGPPAPAGLEAKSGTENVSTFPWSL 120
           LSKRHLSLSPLSKDVAMGMVL AATGRGWTTGSGMEGPPAPAG+EAKSGTENVSTFPWSL
Sbjct: 61  LSKRHLSLSPLSKDVAMGMVLSAATGRGWTTGSGMEGPPAPAGMEAKSGTENVSTFPWSL 120

Query: 121 FTKSPRRRMLVAFTCNICGQRTTRAINPHAYTDGTVFVQCCGCNAYHKLVDNLNLFHEMK 180
           FTKSPRRRMLVAFTCNICGQRTTRAINPHAYTDGTVFVQCCGCNAYHKLVDNLNLFHEMK
Sbjct: 121 FTKSPRRRMLVAFTCNICGQRTTRAINPHAYTDGTVFVQCCGCNAYHKLVDNLNLFHEMK 180

Query: 181 CYINPSFNYGSNGWGDVNFKYLDVE-DGNDDVFPIQ 215
           CYINPSFNYGSNGWGDVNFKYLDVE DGNDDVFPIQ
Sbjct: 181 CYINPSFNYGSNGWGDVNFKYLDVEEDGNDDVFPIQ 216

[Close]

BLAST of Chy1G006580 vs. NCBI nr
Match: XP_008447918.1 (PREDICTED: uncharacterized protein LOC103490262 [Cucumis melo] >KAA0025115.1 Mitochondrial protein import protein ZIM17 [Cucumis melo var. makuwa] >TYK19358.1 Mitochondrial protein import protein ZIM17 [Cucumis melo var. makuwa])

HSP 1 Score: 426 bits (1094), Expect = 3.81e-150
Identity = 210/216 (97.22%), Postives = 211/216 (97.69%), Query Frame = 0


Query: 1   MESLINASSAGIVSSSSSFPISSPIRNLPLRSFQVPHASKGNDNESDSQSDSKNTRNLPI 60
           MESLINASSA IVSSSSSFPISSPIRNLPLRSFQVPHASKGNDNESDSQSDS N RNLPI
Sbjct: 1   MESLINASSAAIVSSSSSFPISSPIRNLPLRSFQVPHASKGNDNESDSQSDSNNIRNLPI 60

Query: 61  LSKRHLSLSPLSKDVAMGMVLGAATGRGWTTGSGMEGPPAPAGLEAKSGTENVSTFPWSL 120
           LSKRHLSLSPLSKDVAMGMVL AATGRGWTTGSGMEGPPAPAGLEAKSGTENVSTFPWSL
Sbjct: 61  LSKRHLSLSPLSKDVAMGMVLSAATGRGWTTGSGMEGPPAPAGLEAKSGTENVSTFPWSL 120

Query: 121 FTKSPRRRMLVAFTCNICGQRTTRAINPHAYTDGTVFVQCCGCNAYHKLVDNLNLFHEMK 180
           FTKSPRRRMLVAFTCNICGQRTTRAINPHAYTDGTVFVQCCGCNAYHKLVDNLNLFHEMK
Sbjct: 121 FTKSPRRRMLVAFTCNICGQRTTRAINPHAYTDGTVFVQCCGCNAYHKLVDNLNLFHEMK 180

Query: 181 CYINPSFNYGSNGWGDVNFKYLDVE-DGNDDVFPIQ 215
           CYINPSFNYGSNGWGDVNFKYLDVE DGNDD+FPIQ
Sbjct: 181 CYINPSFNYGSNGWGDVNFKYLDVEEDGNDDIFPIQ 216

[Close]

BLAST of Chy1G006580 vs. NCBI nr
Match: XP_022953012.1 (uncharacterized protein LOC111455528 [Cucurbita moschata] >KAG6572131.1 hypothetical protein SDJN03_28859, partial [Cucurbita argyrosperma subsp. sororia] >KAG7011787.1 ZIM17 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 409 bits (1052), Expect = 9.64e-144
Identity = 199/216 (92.13%), Postives = 206/216 (95.37%), Query Frame = 0


Query: 1   MESLINASSAGIVSSSSSFPISSPIRNLPLRSFQVPHASKGNDNESDSQSDSKNTRNLPI 60
           MESLINASSA I+SSSSSFPISSP R LPLRSFQVPHASKGN+NESDSQSDSKN RNLPI
Sbjct: 1   MESLINASSAAIISSSSSFPISSPNRMLPLRSFQVPHASKGNENESDSQSDSKNIRNLPI 60

Query: 61  LSKRHLSLSPLSKDVAMGMVLGAATGRGWTTGSGMEGPPAPAGLEAKSGTENVSTFPWSL 120
           LS+RHLSLSPLSKD AMG+VLGAA GRGWTTGSGMEGPPAPAGLEA SGTENVSTFPWSL
Sbjct: 61  LSRRHLSLSPLSKDAAMGVVLGAAAGRGWTTGSGMEGPPAPAGLEANSGTENVSTFPWSL 120

Query: 121 FTKSPRRRMLVAFTCNICGQRTTRAINPHAYTDGTVFVQCCGCNAYHKLVDNLNLFHEMK 180
           FTKSPRRRMLVAFTCNICGQRTTRAINPHAYTDGTVFVQCCGCNAYHKLVDNLNLFHEMK
Sbjct: 121 FTKSPRRRMLVAFTCNICGQRTTRAINPHAYTDGTVFVQCCGCNAYHKLVDNLNLFHEMK 180

Query: 181 CYINPSFNYGSNGWGDVNFKYLDVE-DGNDDVFPIQ 215
           CY+NP FNYGSNGWGD+NFKYLD+E DGNDD FPIQ
Sbjct: 181 CYVNPGFNYGSNGWGDLNFKYLDIEEDGNDDTFPIQ 216

[Close]

BLAST of Chy1G006580 vs. NCBI nr
Match: XP_023511505.1 (uncharacterized protein LOC111776313 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 409 bits (1050), Expect = 1.95e-143
Identity = 199/216 (92.13%), Postives = 206/216 (95.37%), Query Frame = 0


Query: 1   MESLINASSAGIVSSSSSFPISSPIRNLPLRSFQVPHASKGNDNESDSQSDSKNTRNLPI 60
           MESLINASSA I+SSSSSFPISSP R LPLRSFQVPHASKGN+NESDSQSDSKN RNLPI
Sbjct: 1   MESLINASSAAIISSSSSFPISSPNRMLPLRSFQVPHASKGNENESDSQSDSKNIRNLPI 60

Query: 61  LSKRHLSLSPLSKDVAMGMVLGAATGRGWTTGSGMEGPPAPAGLEAKSGTENVSTFPWSL 120
           LS+RHLSLSPLSKD AMG+VLGAA GRGWTTGSGMEGPPAPAGLEA SGTENVSTFPWSL
Sbjct: 61  LSRRHLSLSPLSKDAAMGVVLGAAAGRGWTTGSGMEGPPAPAGLEANSGTENVSTFPWSL 120

Query: 121 FTKSPRRRMLVAFTCNICGQRTTRAINPHAYTDGTVFVQCCGCNAYHKLVDNLNLFHEMK 180
           FTKSPRRRMLVAFTCNICGQRTTRAINPHAYTDGTVFVQCCGCNAYHKLVDNLNLFHEMK
Sbjct: 121 FTKSPRRRMLVAFTCNICGQRTTRAINPHAYTDGTVFVQCCGCNAYHKLVDNLNLFHEMK 180

Query: 181 CYINPSFNYGSNGWGDVNFKYLDVE-DGNDDVFPIQ 215
           CY+NP FNYGSNGWGD+NFKYLD+E DGNDD FPIQ
Sbjct: 181 CYVNPGFNYGSNGWGDLNFKYLDMEEDGNDDTFPIQ 216

[Close]

BLAST of Chy1G006580 vs. NCBI nr
Match: XP_022968890.1 (uncharacterized protein LOC111468074 [Cucurbita maxima])

HSP 1 Score: 409 bits (1050), Expect = 2.84e-142
Identity = 199/216 (92.13%), Postives = 206/216 (95.37%), Query Frame = 0


Query: 1   MESLINASSAGIVSSSSSFPISSPIRNLPLRSFQVPHASKGNDNESDSQSDSKNTRNLPI 60
           MESLINASSA I+SSSSSFPISSP R LPLRSFQVPHASKGN+NESDSQSDSKN RNLPI
Sbjct: 76  MESLINASSAAIISSSSSFPISSPNRMLPLRSFQVPHASKGNENESDSQSDSKNIRNLPI 135

Query: 61  LSKRHLSLSPLSKDVAMGMVLGAATGRGWTTGSGMEGPPAPAGLEAKSGTENVSTFPWSL 120
           LS+RHLSLSPLSKD AMG+VLGAA GRGWTTGSGMEGPPAPAGLEA SGTENVSTFPWSL
Sbjct: 136 LSRRHLSLSPLSKDAAMGVVLGAAAGRGWTTGSGMEGPPAPAGLEANSGTENVSTFPWSL 195

Query: 121 FTKSPRRRMLVAFTCNICGQRTTRAINPHAYTDGTVFVQCCGCNAYHKLVDNLNLFHEMK 180
           FTKSPRRRMLVAFTCNICGQRTTRAINPHAYTDGTVFVQCCGCNAYHKLVDNLNLFHEMK
Sbjct: 196 FTKSPRRRMLVAFTCNICGQRTTRAINPHAYTDGTVFVQCCGCNAYHKLVDNLNLFHEMK 255

Query: 181 CYINPSFNYGSNGWGDVNFKYLDVE-DGNDDVFPIQ 215
           CY+NP FNYGSNGWGD+NFKYLD+E DGNDD FPIQ
Sbjct: 256 CYVNPGFNYGSNGWGDLNFKYLDMEEDGNDDTFPIQ 291

[Close]

BLAST of Chy1G006580 vs. TAIR 10
Match: AT5G27280.1 (Zim17-type zinc finger protein )

HSP 1 Score: 204.5 bits (519), Expect = 8.4e-53
Identity = 121/225 (53.78%), Postives = 147/225 (65.33%), Query Frame = 0


Query: 1   MESLINASSAGIVSSSSS-FPISSPIRNL----PLRSFQVPHASKGNDNESDSQSDSKNT 60
           ME+   +S+A I+SSSSS   I SP +      P R  ++  ++K  D + D Q    N+
Sbjct: 1   MEATSLSSAATIISSSSSPLSIFSPKKRTDSSPPPRIVRL--SNKKEDKDYDPQHSESNS 60

Query: 61  RNLPILSKRHLSLSPLSKDVAMGMVLGAATGRGWTTGSGMEGPPAPAGLEAKSGTENVST 120
            +L            LS D AMG+VL AA+ +GWTTGSGMEGP  P    AK+ T+ VST
Sbjct: 61  SSL-------FRNRTLSNDEAMGLVLSAASVKGWTTGSGMEGPSLP----AKTDTDTVST 120

Query: 121 FPWSLFTKSPRRRMLVAFTCNICGQRTTRAINPHAYTDGTVFVQCCGCNAYHKLVDNLNL 180
           FPWSLFTKSPRRRM VAFTCN+CGQRTTRAINPHAYTDGTVFVQCCGCN +HKLVDNLNL
Sbjct: 121 FPWSLFTKSPRRRMRVAFTCNVCGQRTTRAINPHAYTDGTVFVQCCGCNVFHKLVDNLNL 180

Query: 181 FHEMKCYI-NPSFNYGSNGWGDVNFKYLDVED-----GNDDVFPI 215
           FHE+K Y+ + SF+Y    W        D ED      ++DVFP+
Sbjct: 181 FHEVKYYVSSSSFDYTDAKWDVSGLNLFDDEDDDNAGDSNDVFPL 212

[Close]

BLAST of Chy1G006580 vs. TAIR 10
Match: AT1G68730.1 (Zim17-type zinc finger protein )

HSP 1 Score: 79.3 bits (194), Expect = 4.1e-15
Identity = 37/60 (61.67%), Postives = 41/60 (68.33%), Query Frame = 0


Query: 119 SLFTKSPRRRMLVAFTCNICGQRTTRAINPHAYTDGTVFVQCCGCNAYHKLVDNLNLFHE 178
           S+  K PRR + V FTCN CG+RT R IN HAY  G VFVQC GC  +HKLVDNL L  E
Sbjct: 96  SIDIKLPRRSLQVEFTCNSCGERTKRLINRHAYEKGLVFVQCAGCLKHHKLVDNLGLIVE 155

The following BLAST results are available for this feature:

BLAST of Chy1G006580 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
B3LPE4	1.5e-06	30.11	Mitochondrial protein import protein ZIM17 OS=Saccharomyces cerevisiae (strain R...	[more]
B5VQB0	1.5e-06	30.11	Mitochondrial protein import protein ZIM17 OS=Saccharomyces cerevisiae (strain A...	[more]
A6ZSH0	1.5e-06	30.11	Mitochondrial protein import protein ZIM17 OS=Saccharomyces cerevisiae (strain Y...	[more]
P42844	1.5e-06	30.11	Mitochondrial protein import protein ZIM17 OS=Saccharomyces cerevisiae (strain A...	[more]
Q9D113	4.4e-06	40.00	DNL-type zinc finger protein OS=Mus musculus OX=10090 GN=Dnlz PE=1 SV=1	[more]

BLAST of Chy1G006580 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K614	2.9e-117	98.61	DNL-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G016610 PE...	[more]
A0A5D3D712	2.1e-115	97.22	Mitochondrial protein import protein ZIM17 OS=Cucumis melo var. makuwa OX=119469...	[more]
A0A1S3BII6	2.1e-115	97.22	uncharacterized protein LOC103490262 OS=Cucumis melo OX=3656 GN=LOC103490262 PE=...	[more]
A0A6J1GM10	1.5e-110	92.13	uncharacterized protein LOC111455528 OS=Cucurbita moschata OX=3662 GN=LOC1114555...	[more]
A0A6J1HYG2	2.6e-110	92.13	uncharacterized protein LOC111468074 OS=Cucurbita maxima OX=3661 GN=LOC111468074...	[more]

BLAST of Chy1G006580 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004144863.1	1.38e-152	98.61	uncharacterized protein LOC101212325 [Cucumis sativus] >KGN43276.1 hypothetical ...	[more]
XP_008447918.1	3.81e-150	97.22	PREDICTED: uncharacterized protein LOC103490262 [Cucumis melo] >KAA0025115.1 Mit...	[more]
XP_022953012.1	9.64e-144	92.13	uncharacterized protein LOC111455528 [Cucurbita moschata] >KAG6572131.1 hypothet...	[more]
XP_023511505.1	1.95e-143	92.13	uncharacterized protein LOC111776313 [Cucurbita pepo subsp. pepo]	[more]
XP_022968890.1	2.84e-142	92.13	uncharacterized protein LOC111468074 [Cucurbita maxima]	[more]

BLAST of Chy1G006580 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G27280.1	8.4e-53	53.78	Zim17-type zinc finger protein	[more]
AT1G68730.1	4.1e-15	61.67	Zim17-type zinc finger protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007853	Zinc finger, DNL-type	PFAM	PF05180	zf-DNL	coord: 131..183 e-value: 2.4E-16 score: 59.4
IPR007853	Zinc finger, DNL-type	PROSITE	PS51501	ZF_DNL	coord: 124..215 score: 14.674582
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 35..59
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 88..108
None	No IPR available	PANTHER	PTHR20922:SF15	A_TM021B04.14 PROTEIN	coord: 1..214
IPR024158	Mitochondrial import protein TIM15	PANTHER	PTHR20922	UNCHARACTERIZED	coord: 1..214

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy1G006580.1	Chy1G006580.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006457	protein folding
biological_process	GO:0030150	protein import into mitochondrial matrix
biological_process	GO:0050821	protein stabilization
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005739	mitochondrion
molecular_function	GO:0051087	chaperone binding
molecular_function	GO:0008270	zinc ion binding