CcUC11G223330.1 (mRNA) Watermelon (PI 537277) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGGTCCTTACTTTTACTTTTACTTTTAACTTTTACTACTTACCTCAACAACAACAGTTAAAAAAGGTGAAACTAAAACCATTACAAAAGTTACTGAAATTCAAGGAGATTGGCAGTAGCAATTGCATATTTGGGTGGTGTTTGTTTTGAGATTGTTCTTGTTCTCAGCAGCAGAGTAAATAGTAATAATTTAATAACAGAGGGTAAATTTTTAAGTGAATTAGTAGCTTGTTTTAAATGGCTTAATTGACTTAGAATCTTGAATGACTCCAGCTACTGATCCAGCTGCTGCTGCAATGGTGATTATAAGGCAAGCAATGCTGAGAATTTGGAGGCTAATCCATCTTGTGCTCCATTTTGGGATTTTCTTTTGTGCAATGTACATTTCAACAGGGAAGTAGACAGTGAGAGGCCAAAATCCCAAGGCTCCGAGAAGTCCAACGATGTCATTGAAGAACGGGAGGAGCATCGAGATGAGTGTCGTGATCATCACGAAGATTGTCCTCCAAACCAACCTAAAGAGGTTGAGTTTGAAGGGGCGAAAGCCTGGGATTGGGATATTGATGTCTTCGTTGATGAATTGGCTATCTGGGAATCGGTTCGATGCGAATTTCTCGATGAAGGCGAAGAGGGGTTGGCAAAAAACTTGGTAAGCACCGACGAGATGGACTACGATGGCTACGTTCGCTATGTCGAGAAGCCAATACGGATTGTAGAAGCCGAAACCAGTGAGGAGGTTGCCAGGAGCAAAGTCTCCAAAGGCCGCATATCCCATACACCCACAAAGTATGTAGAAAACTGATGTCACTGCTACACTTAAAAGAGTGGCCTTCTTCATTGTCTTGGCTTCTGATGGAGGGGCTTTGATTGTGTCCTATTTACAAATAAAAAAGAAGATCATTACTTGAAAGACCAACGCTTCAGTGTTCTCAAAATTGGAAACAAGAAACAATGAACGAGAAACGAAACGAAGAAACGTTGTCAGGCGGGTGCTTCTTAAAGAAAAATTGAAACAAAATCATTTTTTTGAAAGACCAACGCTTTTGTTTCTCAAAACTAGAAACAAGAAATAGTAAACCAAAAACAAAGAAACGCTATCAAACGGATACTTCTAAAAGAGAAATTGAAACAAAGACCAATGCTTGAATCAGTAAACAAGAAACAATAAAACGTTATGAAACGGTTACTTCTAAAAGTAAAAGGTGGTAGGTTCAAATCTGGGTGATGTCATAATTTTATTTTACCTGAATTTCAATGAGGATAATGGAGAAAGAGTAGGCAAAAGCCATGTCACCAAGGGCTTGGAAGCTCCTCCATATCTTTTGGGATTCAGTGACAGTGCCAATGCTAACTCCTGTAAGACTGCCCTTGAATTTTCCATTATCTAAACATAGAAACAACAAGAATTAAATTAAACATTTATTTATGTTATGAATTTGATTAAAAAGAAGAAGATATTGATAGACATATAATGAAAAAAAGACCTGCAACTTGAATGATTCCAAGAACAAGTCCAATTATGGAGTAAGTAAAAGACATAACAGCAGCAACAATGGAGAGCCACCATAATTGATCAAAATCTGGAATTTGGGACAAGAAAATTTCTATAATCCCAAATGAAATCATATATGGATTGCTGTTCATATGACAAGGATTTTTCCCTCCACTTTTGTGGAAGCAGTTGGATCTTTTGATTGCCCTGTTCAAACCCAAATTAATTCATTAATAAACAAAATAATCAAAACCCATTAAAGATTTTTTTAGAAAATTAAAAAAATTAAAAATAAAAATAAAAAATGATACTAACATCATGCTTATGGATGAGGCTATTGTGTATCCAATGGCTACTCCAAAAAGATTAACATATTGAACCAGCCCACATAGCTTCACCTTAAACCCACCTGAGAAACATAAAGCAAATTTAAAAATAAAATAATTTATTTAATTTGTGCTGGGGAAATTTGTTTCTAAAAAACCAAATTTTGATCTCATTTGAATTGTAGGACTTAAAATGTGAAAATTTTGAAAACAACAAATTTGCAGTTTTCATTTTTCTGTTTTGTTTTTTTCAGATTCTAA ATGGGCTGCTGCTGCAATGGTGATTATAAGGCAAGCAATGCTGAGAATTTGGAGGCTAATCCATCTTGTGCTCCATTTTGGGATTTTCTTTTGTGCAATGTACATTTCAACAGGGAAGTAGACAGTGAGAGGCCAAAATCCCAAGGCTCCGAGAAGTCCAACGATGTCATTGAAGAACGGGAGGAGCATCGAGATGAGTGTCGTGATCATCACGAAGATTGTCCTCCAAACCAACCTAAAGAGGTTGAGTTTGAAGGGGCGAAAGCCTGGGATTGGGATATTGATGTCTTCGTTGATGAATTGGCTATCTGGGAATCGGTTCGATGCGAATTTCTCGATGAAGGCGAAGAGGGGTTGGCAAAAAACTTGGTAAGCACCGACGAGATGGACTACGATGGCTACGTTCGCTATGTCGAGAAGCCAATACGGATTGTAGAAGCCGAAACCAGTGAGGAGGTTGCCAGGAGCAAAGTCTCCAAAGGCCGCATATCCCATACACCCACAAAATTCTAA ATGGGCTGCTGCTGCAATGGTGATTATAAGGCAAGCAATGCTGAGAATTTGGAGGCTAATCCATCTTGTGCTCCATTTTGGGATTTTCTTTTGTGCAATGTACATTTCAACAGGGAAGTAGACAGTGAGAGGCCAAAATCCCAAGGCTCCGAGAAGTCCAACGATGTCATTGAAGAACGGGAGGAGCATCGAGATGAGTGTCGTGATCATCACGAAGATTGTCCTCCAAACCAACCTAAAGAGGTTGAGTTTGAAGGGGCGAAAGCCTGGGATTGGGATATTGATGTCTTCGTTGATGAATTGGCTATCTGGGAATCGGTTCGATGCGAATTTCTCGATGAAGGCGAAGAGGGGTTGGCAAAAAACTTGGTAAGCACCGACGAGATGGACTACGATGGCTACGTTCGCTATGTCGAGAAGCCAATACGGATTGTAGAAGCCGAAACCAGTGAGGAGGTTGCCAGGAGCAAAGTCTCCAAAGGCCGCATATCCCATACACCCACAAAATTCTAA MGCCCNGDYKASNAENLEANPSCAPFWDFLLCNVHFNREVDSERPKSQGSEKSNDVIEEREEHRDECRDHHEDCPPNQPKEVEFEGAKAWDWDIDVFVDELAIWESVRCEFLDEGEEGLAKNLVSTDEMDYDGYVRYVEKPIRIVEAETSEEVARSKVSKGRISHTPTKF Homology
BLAST of CcUC11G223330.1 vs. NCBI nr
Match: BAS75576.1 (Os01g0882900, partial [Oryza sativa Japonica Group]) HSP 1 Score: 105.9 bits (263), Expect = 3.5e-19 Identity = 64/161 (39.75%), Postives = 100/161 (62.11%), Query Frame = 0
BLAST of CcUC11G223330.1 vs. NCBI nr
Match: KAB8084618.1 (hypothetical protein EE612_007205, partial [Oryza sativa]) HSP 1 Score: 104.8 bits (260), Expect = 7.7e-19 Identity = 63/161 (39.13%), Postives = 100/161 (62.11%), Query Frame = 0
BLAST of CcUC11G223330.1 vs. NCBI nr
Match: KAB8114528.1 (hypothetical protein EE612_053998, partial [Oryza sativa]) HSP 1 Score: 102.4 bits (254), Expect = 3.8e-18 Identity = 69/164 (42.07%), Postives = 93/164 (56.71%), Query Frame = 0
BLAST of CcUC11G223330.1 vs. NCBI nr
Match: BAT13040.1 (Os11g0195650, partial [Oryza sativa Japonica Group]) HSP 1 Score: 99.0 bits (245), Expect = 4.2e-17 Identity = 68/164 (41.46%), Postives = 92/164 (56.10%), Query Frame = 0
BLAST of CcUC11G223330.1 vs. NCBI nr
Match: KAB8116889.1 (hypothetical protein EE612_058288, partial [Oryza sativa] >BAT16235.1 Os12g0195183, partial [Oryza sativa Japonica Group]) HSP 1 Score: 99.0 bits (245), Expect = 4.2e-17 Identity = 61/160 (38.12%), Postives = 90/160 (56.25%), Query Frame = 0
BLAST of CcUC11G223330.1 vs. ExPASy TrEMBL
Match: A0A0P0VB87 (Os01g0882900 protein (Fragment) OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0882900 PE=4 SV=1) HSP 1 Score: 105.9 bits (263), Expect = 1.7e-19 Identity = 64/161 (39.75%), Postives = 100/161 (62.11%), Query Frame = 0
BLAST of CcUC11G223330.1 vs. ExPASy TrEMBL
Match: A0A0P0Y029 (Os11g0195650 protein (Fragment) OS=Oryza sativa subsp. japonica OX=39947 GN=Os11g0195650 PE=4 SV=1) HSP 1 Score: 99.0 bits (245), Expect = 2.0e-17 Identity = 68/164 (41.46%), Postives = 92/164 (56.10%), Query Frame = 0
BLAST of CcUC11G223330.1 vs. ExPASy TrEMBL
Match: A0A0P0Y7Y0 (Os12g0195183 protein (Fragment) OS=Oryza sativa subsp. japonica OX=39947 GN=Os12g0195183 PE=4 SV=1) HSP 1 Score: 99.0 bits (245), Expect = 2.0e-17 Identity = 61/160 (38.12%), Postives = 90/160 (56.25%), Query Frame = 0
BLAST of CcUC11G223330.1 vs. ExPASy TrEMBL
Match: A0A0P0VDQ5 (Os02g0102250 protein (Fragment) OS=Oryza sativa subsp. japonica OX=39947 GN=Os02g0102250 PE=4 SV=1) HSP 1 Score: 89.0 bits (219), Expect = 2.1e-14 Identity = 59/158 (37.34%), Postives = 89/158 (56.33%), Query Frame = 0
BLAST of CcUC11G223330.1 vs. ExPASy TrEMBL
Match: A0A0P0WY97 (Os06g0556101 protein (Fragment) OS=Oryza sativa subsp. japonica OX=39947 GN=Os06g0556101 PE=4 SV=1) HSP 1 Score: 88.2 bits (217), Expect = 3.6e-14 Identity = 59/163 (36.20%), Postives = 89/163 (54.60%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
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