CcUC08G155640.1 (mRNA) Watermelon (PI 537277) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.TATGTCGCCTAATAAGCCTTTTTGCTTTTGTGATAGTGAGCTGCCGAGCAAAAGGTGAGAATTCAGCATCAGTGTCACTCCAGTCACCTTGGAAATCATTGTCAGCTTCACCCCTCATTGTGCGCAAGACAAATGCTTTGGCCTTGCGACGCTGATTGTTGAAGAGACCCCTGATGGAAGTAACAAATCCATCTCCAGCCCCATCACTTGGCCGCTTAAGCCAGGTTATTGGATGTTGATCGGATTTCCCTGCCAGACCCCCTTCATTGTCACTTAAATTAAAGTCGCTGTCAGGAACAACCGTATTGTTGGGTTCCTTTTGACTATGTGCTTTGTCTTTGAACTTCTTACCCTGCGTCCGTGGTGTTTAAGATTTTAAATAACTGACTTAATAATCCAGAAACTCGAATTCAACTCGGTTCAGTTGAATGCAAAAACATAATACATTCAACTTTACTTCCTCTCTAAAAGCTTAGTTTGAGTTTTTATCATAACCAAGCAATGCTTTGGTGACTTGCAAGCTGAGAAATTCGAGGGTGAAGGTAACAAATGCGAACTAAAATGTTGGGAAGGAACAAGAGACGAGGTTGTTACTGGAATATAAAATGTGTGACATTAGTGTTATAATGCAGAGGATCAGATCTAAAAGTTCACCTGCATTCCTGTAACAGACTTTAGAACTCCCCAGATGATATGCTTTTTAACTCGAGAAAATAGCCTACGCCAAGTCCCAGTGAACTCAACACGATGGAATGTATCCATCAGCAGCTTCAGATCATTGACGACAAATCTTGATCCTTCGTAAGTTACTAACAACTCAACCTGTTTCAAAACTTCATTGAGTGATTTACGGAGGAATCTACAAAATACTGTTTCAACAATTAATTCAACAACAAAGCTTACAGACTGAGCTAGCTAACCTGGCTTATCTTGATATTGTGGAACTCCATCATCTTTCGAGGTCTGGATCTTTTCTCATCCTGGGGCTTTATCCCCTTCTTCTCTTCATGGGATGAGCGACCAGCTTTGATAGCTTTGGGATCTTTCAATTTATTACTACCTGATTCATCTGGTTGCTCAACAGAACCCAGTGGTCCACTTTTGGTAATGCTCTGCAAGACAAGCTCAGTAGCAACAGATTCGGCCACAGTCTCTTCCCATGACCTATCAAAGGAAGATGTTCTTCTTAACTCGGGAACTGAGCTGCTGCCAGAATTAGATTTAAGGTTTTGTGTCTTTGATGCCTGCATTGAAAGTATCCGAGACATCATGAGAAATGGAGCATGATCCAAAGGAGCAATATAGCTCATATTTGATCAGTTTCAGAGATCTCAACAGGAGAAACCAACGATCATAACTCCAGCAGTTCCATCCTTCTAAATGTAAAAGAAATCACCCAATCTTTCCTCTTCTTCTTTATTTACTATTATCAGAAAAGAAAACTGGCCCCATGAGCCATAAGTAAGGTTAATAAACTCACCTGAGCAGATTCTGCGTTGACAGATCCTTGACCACCGAGGGAGAAACCTAATTTGGAAAACATCTCCGACTCTTTTGTGTTAGATGCAGATACTTCATGAACTGAAGAACCTTTCCTTACACGCCTTGAACCTGCAGCCGTAGAAATCTTCCATGCTTCCTGTAGCAAAACGTGAGCCACTCAAAATCTATACTTGTGGGAAGCTAAAAAAATAGAAGGTTGCCTTCCACTGAGGAGTTGGCTCCCTTTAGAAACAAAGCTTTTCAACTAACCTGCCGTCTCTGTGAATCTTGTTCTTCCTCTGGAAAAAGGTACTCCCACATCATCCGATACATTGTCTCAGTCAAGTGAATTTTGAGGGGATAAATATCAACCTATAAGAGTAGAATAACACATTAAGCAAACAATCATGCACGAAGAATTAGGAAAAAGAAATTAAAGTGATCAAGATAATTCTGCTTCATGAATATTTTTGGTGAAAAGAAAAACTACAATATTATTTTTAACTGTTAAAGTCTAGTTCATGCAACACATGCACCGGATAAAGTCAGTATCAATTCCTTGTAGGACTTACTGTCTTAGAATTATTCGTCTGACAAATCCATTTCAGGACTTGCTCATCTTCAAGGTGCACTTTTATTTTTCTTTATTTATGTCGAGGAGCACAAGGAAGAATTCAAGATTAAGATAAAAACTAGGCTGTAAAATACACAAATTCACTGTGAAGGAAAAATAAAGAAGGGAAAAAAAAAAGGAAAAGAAAAGAAAAGAGAATGAATTGCTGCAACCCATCCACACCCCCTATGCAACTATAGTTCATTATATGATCTTCCATAAAGCTAATGGATCATAGACTCGACCTCCCATCTGATAACTGGTTTCCAAAGACAAGAAAAGAAAAAATAAAGACCTTCTTGTTCACCCAAGTTAAATTATGAACAAAAGCTGAAAAGTTCTTATAGTTAGCACTGTGAAATATCTAAATTGACAATGCCATTAAACCAAACATTTCCTTATCAGTTAATAATTCAAAGAATTTTTGGTCCTCGAACTACTGTTCCCTATGGAAGAAATGCACACTATAGCAATTTTTTACTAAATAATACAAATATCTATTACTAAAAAATTTGGAGAAAACAAGGGCACTAACCTGGAACATTTCAAGGAGTGAATTTCCATCTCTAGGAGCTCCCTGTTTTGCATCCACCCGAAGCATGACTAATCTGCAGCCATTAAAGTAGATGCTGTAACCGTCTGAAAACCATATGAAGCAATTAATACCCAAATTTCACAAGGAAAAACAGGAAGCTCATTTTCAAAGGGGAATTATGCCATGTTCAAATATCCAATAGATAACAGAATTGCCAATCCCACTCTTGCATTTAGACTTATTTCTTGAACCAAGTGCATCAGCCTTATGTTCAACCAGAGAGAATCAATAACCCATAAAGGTGCGAGTGAATCTGTTCCAGGTCTTAACATAAAAATGGTAATGCATATGGCCAAGCAATGATTATAAAGAACCACTCAAAATAAGTTAAAAAATTGTATGTTTTGATAAACAGATAATCTGTATACATCTGCCCAAGCAGCTATTAAAAGAAAGAAAAATAAAAATCTCACAAAGCACATATATGAAGAAAATAAAAAAGGGCTCAGATAACTTAAAATATTTGATACATAAATAATTTCTTTCTGATGCTTGTGTGCGTGTGTTATTTTATGAATAGATTTTCTTGTTCAGTGTGCCTAACCCCATTAACTCAGAGGAACCTACACCTGTCTCAAAGCTCAAATGCATCAAGGATTTTTCTTATTGAACTCACTCAAAGTTTCAAAACACGCAATCTCTGCATAGGTGTAAGACCGCATGATTTAGCTAACAGGGCCAACCCTTGGAGGCACACTTTACTATTTTACATATTTTGTGAGGTTGAAAATGATAATCTTGAATCACCAAAACGCATGGATTATATTAGAACTTCAGAAGGACATTAGCATGTGATCCAACGAAAACCAAATACTCAGGGGATAGGGATGTAACCTAGACAGATTTAGACTTTCACCAAGATGCAGGAGAAGCAAATAAAAAGAGCTGAAAAAGTACGTACTTTCCCCATTCTGATGGAGGATTCCATGCAGATAGAAGCATGTCAGACTTGGCATTGGGCAAGCAATTTCGTACAACAAAATACTTTGTGGTAAACTGAGCAATCCCAACATCTTTGTAATCACGGTCAAAATCATAAAACTGTAGTAACAGATGGCAACCACGTATTAACTACAGTAATCAACTACCACCGTAATTGTAGAATTATAAGTAATGAATAGTGTCCAAAAAAAAAAAGTTCAACTGACAAGCATTAGTTTACATAAGTCAAGCAACTTGACTGCAATTTAAAATAAATCGTATTAGCTTTTACTGCTGGGATTTCACGAATCCTTTCATCCTGGTTAATCTGTAAAAATTGAACAATCAAACAACCGTGATATTTCTTGTCTAAAAGGATAACGTGAAACATCTAAACCTAGAAACAATTATATACTAGTCCAGTTTTATTATTACAGAAACGTGAACATGTTTTATTAAACAGAAGCATACAAAAAGGAGATGAGATATCCCACTGCATCAACTAGTCTTCTAGTTGTAACTAACAAAAATTCTTGATAGTAGGGTTTTGAGATAGAAGCTTGCTGAAAGAACGCCTATATAGAGAAGAGCATTTTAAAATTCTTCTACTCTTCTCTACAGCAGTTTTTAAGTTTGGAAGGGGCAGCTGAATAGCGTTTTTGGTATGATTTGTGGGTTTCCTTTGAAATTAGAAGTCTTGATTCCCTCGTTTATTCAAAAGATTTCTACCTCCCACTTTGGTTTGGTCTTCGTCCCTTGGGTTGCTCAGTTTGCACTCTATTGGTTTCTTCAACATACTCAAGGATTATCGTTCTTGGTTGCTCGTTTGTCTCTTGTTTGGCAATAGCTTTTAAGTTCTTGATGATCTTTAGCAGTGGGATATTTATTCTGTTTTTTTTTGGGGGGTGTTAGATTTGCTACTATGGAGATGTTCACGTTGTATTTCATTTGTTTTACTCTGTTTCTCTCCCCTCTTTGAGGGTCTTTGTAACTTCAAGCATTAGAAATGAAGGGCATTTTTAGACTCTCACCATGTCATTTAGTTCAGCTTCTGCAAAAGATTTACCATCAACAAGCATGCTCCAGACTACTTTATCAATTTTCAAAGAAATCCGCATGGCATATGAAGGGCTTTTATTCTTCTCCTTCTCCATCAATCTTATCTGAGCAGCTTTCTGAAGAGCCATCCTCAACGATGCAGATGCCATCTTCC TATGTCGCCTAATAAGCCTTTTTGCTTTTGTGATAGTGAGCTGCCGAGCAAAAGTGTCACTCCAGTCACCTTGGAAATCATTGTCAGCTTCACCCCTCATTGTGCGCAAGACAAATGCTTTGGCCTTGCGACGCTGATTGTTGAAGAGACCCCTGATGGAAGTAACAAATCCATCTCCAGCCCCATCACTTGGCCGCTTAAGCCAGGTCTGGATCTTTTCTCATCCTGGGGCTTTATCCCCTTCTTCTCTTCATGGGATGAGCGACCAGCTTTGATAGCTTTGGGATCTTTCAATTTATTACTACCTGATTCATCTGGTTGCTCAACAGAACCCAGTGGTCCACTTTTGGTAATGCTCTGCAAGACAAGCTCAGTAGCAACAGATTCGGCCACAGTCTCTTCCCATGACCTATCAAAGGAAGATGTTCTTCTTAACTCGGGAACTGAGCTGCTGCCAGAATTAGATTTAAGGTTTTGTGTCTTTGATGCCTGCATTGAAAAGATCTCAACAGGAGAAACCAACGATCATAACTCCAGCAGTTCCATCCTTCTAAATATACTTCATGAACTGAAGAACCTTTCCTTACACGCCTTGAACCTGCAGCCAAGGTTGCCTTCCACTGAGGAGTTGGCTCCCTTTAGAAACAAAGCTTTTCAACTAACCTGCCGTCTCTGTGAATCTTGTTCTTCCTCTGGAAAAAGGTACTCCCACATCATCCGATACATTGTCTCAGTCAAATTTCTACCTCCCACTTTGGTTTGGTCTTCGTCCCTTGGGTTGCTCAGTTTGCACTCTATTGGTTTCTTCAACATACTCAAGGATTATCGTTCTTGGTTGCTCCTTCTGCAAAAGATTTACCATCAACAAGCATGCTCCAGACTACTTTATCAATTTTCAAAGAAATCCGCATGGCATATGAAGGGCTTTTATTCTTCTCCTTCTCCATCAATCTTATCTGAGCAGCTTTCTGAAGAGCCATCCTCAACGATGCAGATGCCATCTTCC ATGTCGCCTAATAAGCCTTTTTGCTTTTGTGATAGTGAGCTGCCGAGCAAAAGTGTCACTCCAGTCACCTTGGAAATCATTGTCAGCTTCACCCCTCATTGTGCGCAAGACAAATGCTTTGGCCTTGCGACGCTGATTGTTGAAGAGACCCCTGATGGAAGTAACAAATCCATCTCCAGCCCCATCACTTGGCCGCTTAAGCCAGGTCTGGATCTTTTCTCATCCTGGGGCTTTATCCCCTTCTTCTCTTCATGGGATGAGCGACCAGCTTTGATAGCTTTGGGATCTTTCAATTTATTACTACCTGATTCATCTGGTTGCTCAACAGAACCCAGTGGTCCACTTTTGGTAATGCTCTGCAAGACAAGCTCAGTAGCAACAGATTCGGCCACAGTCTCTTCCCATGACCTATCAAAGGAAGATGTTCTTCTTAACTCGGGAACTGAGCTGCTGCCAGAATTAGATTTAAGGTTTTGTGTCTTTGATGCCTGCATTGAAAAGATCTCAACAGGAGAAACCAACGATCATAACTCCAGCAGTTCCATCCTTCTAAATATACTTCATGAACTGAAGAACCTTTCCTTACACGCCTTGAACCTGCAGCCAAGGTTGCCTTCCACTGAGGAGTTGGCTCCCTTTAGAAACAAAGCTTTTCAACTAACCTGCCGTCTCTGTGAATCTTGTTCTTCCTCTGGAAAAAGGTACTCCCACATCATCCGATACATTGTCTCAGTCAAATTTCTACCTCCCACTTTGGTTTGGTCTTCGTCCCTTGGGTTGCTCAGTTTGCACTCTATTGGTTTCTTCAACATACTCAAGGATTATCGTTCTTGGTTGCTCCTTCTGCAAAAGATTTACCATCAACAAGCATGCTCCAGACTACTTTATCAATTTTCAAAGAAATCCGCATGGCATATGAAGGGCTTTTATTCTTCTCCTTCTCCATCAATCTTATCTGAGCAGCTTTCTGAAGAGCCATCCTCAACGATGCAGATGCCATCTTCC MSPNKPFCFCDSELPSKSVTPVTLEIIVSFTPHCAQDKCFGLATLIVEETPDGSNKSISSPITWPLKPGLDLFSSWGFIPFFSSWDERPALIALGSFNLLLPDSSGCSTEPSGPLLVMLCKTSSVATDSATVSSHDLSKEDVLLNSGTELLPELDLRFCVFDACIEKISTGETNDHNSSSSILLNILHELKNLSLHALNLQPRLPSTEELAPFRNKAFQLTCRLCESCSSSGKRYSHIIRYIVSVKFLPPTLVWSSSLGLLSLHSIGFFNILKDYRSWLLLLQKIYHQQACSRLLYQFSKKSAWHMKGFYSSPSPSILSEQLSEEPSSTMQMPSS Homology
BLAST of CcUC08G155640.1 vs. NCBI nr
Match: GER37364.1 (vegetative storage protein 1 [Striga asiatica]) HSP 1 Score: 70.1 bits (170), Expect = 4.1e-08 Identity = 57/153 (37.25%), Postives = 78/153 (50.98%), Query Frame = 0
BLAST of CcUC08G155640.1 vs. ExPASy TrEMBL
Match: A0A5A7PX74 (Vegetative storage protein 1 OS=Striga asiatica OX=4170 GN=STAS_13770 PE=4 SV=1) HSP 1 Score: 70.1 bits (170), Expect = 2.0e-08 Identity = 57/153 (37.25%), Postives = 78/153 (50.98%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
|