CcUC08G155070.1 (mRNA) Watermelon (PI 537277) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTTCCCTTTCAACCCCACCCTTCTTCTCTACATGACAAGACATCAACAATTAGAGAGCCTGCAGATAATTTAGCAAAGAAGAGGAAGTGGGAAGAGTCGATCCCGACATCACCGTTGAGCTCCATATTCGATATTGAGCTCCACCTTGAAACTCCATTACCTTTCTACTGGCAAAGGTGTCTGGACATTCAGGTCTTTTCTTTTTTCCTACAAATATCCTTCTGTTGTATGTTTTATTTGTTAATTTATAAACTTAAGGTTTTACGTCAATTGACGATTTTACATGGTACCAAAATAGAAAGTTTCGTGTTTAAACACCTAGCTAATGTCATTTTCTCTCAAATTATTATTGATTTCTATAAATTTTTAGGTCATTTAGTGAAATTTAACACTATTAACTTATATAAAGCAAAAGCTTTTGGGTTTAGTGGTGATTTTTTCTTCCTTTTCCATTTTCAGTCCGGAAAGATACACTTTTACAACACGACAACTCAAAAGAGAACATGGAAAGATCCGAGGGACAAGGTCGAGAAAGGCGATGACGACAAGGAAGATGACAACAACGACAACGGCAACGGCAAGGATATCGACATGAGTTTGGACCTTGAACTCAACTTGACTTGTGAATCGCTGGACAAGAACAACAATAATCAAACAATACAAGGCGGGCGTCGAGCTATAAATAATGGAATGATTTTCGGGTCGTCGGAAAATTACAATAACAACAACAATAAGGCGGAGATGGTGGCGGCCGTTTGCGTGAGGTGCCATTTGTTAGTGATGCTGTGTAAATCTTCGCCGGAGTGTCCTAACTGTAAATTTATGAACTCTCCGCCGGAGCAGACCACGCCGGCGATGTTCAAGCGTCGGTGTCATCTTTCTTGGTAA ATGGTTCCCTTTCAACCCCACCCTTCTTCTCTACATGACAAGACATCAACAATTAGAGAGCCTGCAGATAATTTAGCAAAGAAGAGGAAGTGGGAAGAGTCGATCCCGACATCACCGTTGAGCTCCATATTCGATATTGAGCTCCACCTTGAAACTCCATTACCTTTCTACTGGCAAAGGTGTCTGGACATTCAGTCCGGAAAGATACACTTTTACAACACGACAACTCAAAAGAGAACATGGAAAGATCCGAGGGACAAGGTCGAGAAAGGCGATGACGACAAGGAAGATGACAACAACGACAACGGCAACGGCAAGGATATCGACATGAGTTTGGACCTTGAACTCAACTTGACTTGTGAATCGCTGGACAAGAACAACAATAATCAAACAATACAAGGCGGGCGTCGAGCTATAAATAATGGAATGATTTTCGGGTCGTCGGAAAATTACAATAACAACAACAATAAGGCGGAGATGGTGGCGGCCGTTTGCGTGAGGTGCCATTTGTTAGTGATGCTGTGTAAATCTTCGCCGGAGTGTCCTAACTGTAAATTTATGAACTCTCCGCCGGAGCAGACCACGCCGGCGATGTTCAAGCGTCGGTGTCATCTTTCTTGGTAA ATGGTTCCCTTTCAACCCCACCCTTCTTCTCTACATGACAAGACATCAACAATTAGAGAGCCTGCAGATAATTTAGCAAAGAAGAGGAAGTGGGAAGAGTCGATCCCGACATCACCGTTGAGCTCCATATTCGATATTGAGCTCCACCTTGAAACTCCATTACCTTTCTACTGGCAAAGGTGTCTGGACATTCAGTCCGGAAAGATACACTTTTACAACACGACAACTCAAAAGAGAACATGGAAAGATCCGAGGGACAAGGTCGAGAAAGGCGATGACGACAAGGAAGATGACAACAACGACAACGGCAACGGCAAGGATATCGACATGAGTTTGGACCTTGAACTCAACTTGACTTGTGAATCGCTGGACAAGAACAACAATAATCAAACAATACAAGGCGGGCGTCGAGCTATAAATAATGGAATGATTTTCGGGTCGTCGGAAAATTACAATAACAACAACAATAAGGCGGAGATGGTGGCGGCCGTTTGCGTGAGGTGCCATTTGTTAGTGATGCTGTGTAAATCTTCGCCGGAGTGTCCTAACTGTAAATTTATGAACTCTCCGCCGGAGCAGACCACGCCGGCGATGTTCAAGCGTCGGTGTCATCTTTCTTGGTAA MVPFQPHPSSLHDKTSTIREPADNLAKKRKWEESIPTSPLSSIFDIELHLETPLPFYWQRCLDIQSGKIHFYNTTTQKRTWKDPRDKVEKGDDDKEDDNNDNGNGKDIDMSLDLELNLTCESLDKNNNNQTIQGGRRAINNGMIFGSSENYNNNNNKAEMVAAVCVRCHLLVMLCKSSPECPNCKFMNSPPEQTTPAMFKRRCHLSW Homology
BLAST of CcUC08G155070.1 vs. NCBI nr
Match: XP_038885611.1 (sodium/hydrogen exchanger 1-like [Benincasa hispida]) HSP 1 Score: 368.2 bits (944), Expect = 4.5e-98 Identity = 183/209 (87.56%), Postives = 195/209 (93.30%), Query Frame = 0
BLAST of CcUC08G155070.1 vs. NCBI nr
Match: XP_008444823.1 (PREDICTED: uncharacterized protein LOC103488058 [Cucumis melo] >KAA0065153.1 uncharacterized protein E6C27_scaffold82G004890 [Cucumis melo var. makuwa]) HSP 1 Score: 345.5 bits (885), Expect = 3.2e-91 Identity = 173/211 (81.99%), Postives = 189/211 (89.57%), Query Frame = 0
BLAST of CcUC08G155070.1 vs. NCBI nr
Match: KAE8652131.1 (hypothetical protein Csa_021889 [Cucumis sativus]) HSP 1 Score: 343.6 bits (880), Expect = 1.2e-90 Identity = 174/210 (82.86%), Postives = 192/210 (91.43%), Query Frame = 0
BLAST of CcUC08G155070.1 vs. NCBI nr
Match: XP_004152643.1 (uncharacterized protein LOC101203360 [Cucumis sativus]) HSP 1 Score: 343.6 bits (880), Expect = 1.2e-90 Identity = 174/210 (82.86%), Postives = 192/210 (91.43%), Query Frame = 0
BLAST of CcUC08G155070.1 vs. NCBI nr
Match: XP_023002678.1 (uncharacterized protein LOC111496462 [Cucurbita maxima]) HSP 1 Score: 292.0 bits (746), Expect = 4.1e-75 Identity = 151/207 (72.95%), Postives = 173/207 (83.57%), Query Frame = 0
BLAST of CcUC08G155070.1 vs. ExPASy TrEMBL
Match: A0A5A7VAF4 (WW domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G004890 PE=4 SV=1) HSP 1 Score: 345.5 bits (885), Expect = 1.5e-91 Identity = 173/211 (81.99%), Postives = 189/211 (89.57%), Query Frame = 0
BLAST of CcUC08G155070.1 vs. ExPASy TrEMBL
Match: A0A1S3BAS4 (uncharacterized protein LOC103488058 OS=Cucumis melo OX=3656 GN=LOC103488058 PE=4 SV=1) HSP 1 Score: 345.5 bits (885), Expect = 1.5e-91 Identity = 173/211 (81.99%), Postives = 189/211 (89.57%), Query Frame = 0
BLAST of CcUC08G155070.1 vs. ExPASy TrEMBL
Match: A0A0A0LNT8 (WW domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G368900 PE=4 SV=1) HSP 1 Score: 343.6 bits (880), Expect = 5.8e-91 Identity = 174/210 (82.86%), Postives = 192/210 (91.43%), Query Frame = 0
BLAST of CcUC08G155070.1 vs. ExPASy TrEMBL
Match: A0A6J1KU99 (uncharacterized protein LOC111496462 OS=Cucurbita maxima OX=3661 GN=LOC111496462 PE=4 SV=1) HSP 1 Score: 292.0 bits (746), Expect = 2.0e-75 Identity = 151/207 (72.95%), Postives = 173/207 (83.57%), Query Frame = 0
BLAST of CcUC08G155070.1 vs. ExPASy TrEMBL
Match: A0A6J1GKF5 (uncharacterized protein LOC111454730 OS=Cucurbita moschata OX=3662 GN=LOC111454730 PE=4 SV=1) HSP 1 Score: 278.1 bits (710), Expect = 3.0e-71 Identity = 148/207 (71.50%), Postives = 167/207 (80.68%), Query Frame = 0
BLAST of CcUC08G155070.1 vs. TAIR 10
Match: AT1G78170.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G22250.1); Has 66 Blast hits to 66 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 66; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 68.2 bits (165), Expect = 9.1e-12 Identity = 57/187 (30.48%), Postives = 87/187 (46.52%), Query Frame = 0
BLAST of CcUC08G155070.1 vs. TAIR 10
Match: AT4G08910.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G78170.1); Has 68 Blast hits to 68 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 64; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). ) HSP 1 Score: 64.3 bits (155), Expect = 1.3e-10 Identity = 45/143 (31.47%), Postives = 70/143 (48.95%), Query Frame = 0
BLAST of CcUC08G155070.1 vs. TAIR 10
Match: AT1G22250.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G78170.1); Has 64 Blast hits to 64 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 64; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 57.8 bits (138), Expect = 1.2e-08 Identity = 23/44 (52.27%), Postives = 32/44 (72.73%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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