Carg25507-RA (mRNA) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg25507-RA
Type	mRNA
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Protein of Unknown Function (DUF239)
Location	Carg_Chr10: 5615483 .. 5618544 (+)
Sequence length	705
RNA-Seq Expression	Carg25507-RA
Synteny	Carg25507-RA

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTAATGTTCTTCGTGTTCTTCGTGTTCTAAGAACCCTAATGGATCATCTTCTTCCTTTTGCGTTGTTCTTATCTCTTTTTCTTCTTCTTATTCAAAGATTCCCTCTGGTTTGTGGCCTCAATTTTAGTTCTAAACAAGTTAGCAGCTTGAGATTGGACAGGATTCAAAGGCATCTGGACACCATTAACAAGCCTCCTCTTCTCACCATTCAGGTCATCAATTTCTCCCCTTTTTTCTCTTCAATCTTCCATTTTTTTAATTGGGTTTCTAAAAGTTTGCATTTTTATGTAATGGGTATATCAAATTTATGCATTTTTATACATTTTTGCCATTTTTTTTTTGTTGGTTTGTACCAAAAAAATCGAACCTTTTCGCAATGGGTATTTGAAATGTTTGTTCTTCCATATGTTTATGTAGTCCCATCTCTAGCAGATATTGTCGTTTTTTAGTTTTTTCTTTCAGACTTCCCCAAAACATTAAAACTAATTTGCTAGGAGAAGGTTTCCACACGAACTGTGTTTTGTTGTCCTCTCCCACTATTATTCGACATCACAATTTTTGAGATTTTTTTTTTCTCTTTGCTAATACTTTTCCATTTTATTTATTCAGAGCCCAGATGGTGATATTATAGACTGTGTTCATAAAAGAAAACAGCCTGCCTTGGATCATCCCCTCTTGAAGAACCACAAGATTCAGGTCCAAACACTCTCTAAATACAATAATAGTAATTATAATTATTATAAATTTCATATCAATTCTTAAACTTTGGAACGGATTCATTTTCGATCTATTGTTTAACAAATAGTTTATACAATCGGGGACGTTTATCAACTAAAACAGTACTTAATCCAAACCATAAACATTGAGCTACATTATATATTTTTTTTTCCGATTTGGGTCATGTTAAATTTTTAGTTATTCGAAAAATTTGGTTCGATTTGTAGGTTGACATTTTTTTGGTCAGGTCTCAAAATATAAGGTTACAATCCTATTCATAATTTTTAAAAATATTAAGAATATCTAACGTTTATAATTGATGATAAATGTTTGATATTTGAATTTTATGAAATTTTAATTATTAATACGATCGAGAATAAATAATATTTTTTAAAATATATTAAAAAAATAACCCGACAACCAGATTAAGATTTGTGAACTCTATTTAAGTTAGTCGGGTCACCAACTTAACTAACCCGTGTACACTCTTGATTTAACGTGCCCTCGTCCTATAGAAATTAACAACTAAAATAACAATTTAAAAACTTGTAAAAAAAAAATTAAAAATATATAATTATTAATTTATTGGTGCAGAGAGGGCCAACAGAGTGGCCAAAAAGGAAGAAGGCGAAAGAGAATGAAGAAGATGTGAGGGATGGGAGGGCAGGATCAGGTGCGGGAGGTCCATTTCAAACTTGGCGTGTGAACGGGACACGGTGTCCGAAAGGGAGTATTCCAGTGCGACGCAGTACAGTGAACGACGTGCTAAGAGCCAAGTCAATTTTTGACTACGGGAAGAAAAAACGACCAATTCTCCTTGATCGACAAATCGACGCTCCTGATATAGTCAGTGGGAATGGTCACGAGGTACCTGATCTTTCCCCCTTTTTTCTCCTTTTTCATAGCATTTATGAATGGATTCTTTTCCTTCACTTCAACTCTATATATTTTAGGTCTATCATTAAATTTTTATTACATTAAAATAATAATAATATAATAATAAATAAATAAATTTTTGGTTTTGGTTTTTTTTTTTTTTTTTTTTTGCTTAATTTTGAAATTTTTTATTTAATATCAATTAATATATTTATTAGAAGATTGAGAGAGGCTTAAAATAACTAATTTAGCTAAAAAAAATTATTTCAATGATTTTATAAGGTAATTATAAATATTTATTAACCTCAAATAACATAGAAATTGCAAAATATAATTTTTTTTTGCTGAAAAAAATATTTAATATATTTAAAAATATCCCAACTTGGAAAAATAAAATTTTAAATAAGCATCAATAAAAAAAATATTGAAAATTTGACTGGTCAAAGGGTTGATTAGTAATTAACTTAAAGCAAACATAATAAATGACCTATTAAAAAAAGCTTAAACTAATTGACTTTATAACTGTCAGTTTATATATATATATATATATTTACCCTAAAAATCTTTTTATTTGTTTTTAATTTGCTAAATTTTATGCAATTTTTATGAATTTAATTTGATGATGATTATGTGGACGGTTGCATATAAAATAGCATGCGATCGCATACACGGAATCATCAGAGATGTACGGAGCTAAGGCAACAATAAACGTGTGGGACCCGTCAATTCAAGTGGTCAACGAGTTTAGCCTCTCTCAGGTTTGGATCATCTCGGGATCATTCGACGGCTCTGATCTCAACAGCATAGAAGCTGGCTGGCAGGTATTTTTTTTACATTTTCTGCACCCTCCCGCACACAATCCCATACCACTCCCCATTTTCATAAAATAAAATAATAATAAAAAAGTATTTTCTTTTTTCTTTTTTTTATTAACTTGTTGATTTTAATGCAATTTCAGTCCTTTGTTGAATCCAAAGCTTATTCAATTTTCTAGAAGTTTGTTTGATTCTTTTTCCTTATATATATATATATATATATATATATATATATTTGTTATTTTAAGAAAATTTTAAGATAATTATAAATAAAATCAAGTTAAAAAAACTGGTTGATTATTAATGTTTTAAGTCAACTGTAATTACCCTTATTCGTTTGTTAAGATTCAATTATTATATGAAAAATAATGCACGTATTTTTTTTTCTTTGTTAAAAATACATGATTTATGCAATTAAATGTAATTGAGCTCTGTGTTTTAGTTAGAACATTATAAATATATTTTTTAATTTGTATTTATCGAGCTTATTGGATTTTCTAAAGTCTTGATTATTCTACTAGTCAGGTCAGTCCGGAGCTTTATGGTGACAGCAGACCTAGATTATTCACGTATTGGACGGTTCGATCTCTAATCTCACTATTATTTTTAAATTATTTTTTTTAAGTCGTAGGAATTTAAGATAATAAACTTTC

mRNA sequence

ATTAATGTTCTTCGTGTTCTTCGTGTTCTAAGAACCCTAATGGATCATCTTCTTCCTTTTGCGTTGTTCTTATCTCTTTTTCTTCTTCTTATTCAAAGATTCCCTCTGGTTTGTGGCCTCAATTTTAGTTCTAAACAAGTTAGCAGCTTGAGATTGGACAGGATTCAAAGGCATCTGGACACCATTAACAAGCCTCCTCTTCTCACCATTCAGAGCCCAGATGGTGATATTATAGACTGTGTTCATAAAAGAAAACAGCCTGCCTTGGATCATCCCCTCTTGAAGAACCACAAGATTCAGAGAGGGCCAACAGAGTGGCCAAAAAGGAAGAAGGCGAAAGAGAATGAAGAAGATGTGAGGGATGGGAGGGCAGGATCAGGTGCGGGAGGTCCATTTCAAACTTGGCGTGTGAACGGGACACGGTGTCCGAAAGGGAGTATTCCAGTGCGACGCAGTACAGTGAACGACGTGCTAAGAGCCAAGTCAATTTTTGACTACGGGAAGAAAAAACGACCAATTCTCCTTGATCGACAAATCGACGCTCCTGATATAGTCAGTGGGAATGGTCACGAGTCAGGTCAGTCCGGAGCTTTATGGTGACAGCAGACCTAGATTATTCACGTATTGGACGGTTCGATCTCTAATCTCACTATTATTTTTAAATTATTTTTTTTAAGTCGTAGGAATTTAAGATAATAAACTTTC

Coding sequence (CDS)

ATGGATCATCTTCTTCCTTTTGCGTTGTTCTTATCTCTTTTTCTTCTTCTTATTCAAAGATTCCCTCTGGTTTGTGGCCTCAATTTTAGTTCTAAACAAGTTAGCAGCTTGAGATTGGACAGGATTCAAAGGCATCTGGACACCATTAACAAGCCTCCTCTTCTCACCATTCAGAGCCCAGATGGTGATATTATAGACTGTGTTCATAAAAGAAAACAGCCTGCCTTGGATCATCCCCTCTTGAAGAACCACAAGATTCAGAGAGGGCCAACAGAGTGGCCAAAAAGGAAGAAGGCGAAAGAGAATGAAGAAGATGTGAGGGATGGGAGGGCAGGATCAGGTGCGGGAGGTCCATTTCAAACTTGGCGTGTGAACGGGACACGGTGTCCGAAAGGGAGTATTCCAGTGCGACGCAGTACAGTGAACGACGTGCTAAGAGCCAAGTCAATTTTTGACTACGGGAAGAAAAAACGACCAATTCTCCTTGATCGACAAATCGACGCTCCTGATATAGTCAGTGGGAATGGTCACGAGTCAGGTCAGTCCGGAGCTTTATGGTGA

Protein sequence

MDHLLPFALFLSLFLLLIQRFPLVCGLNFSSKQVSSLRLDRIQRHLDTINKPPLLTIQSPDGDIIDCVHKRKQPALDHPLLKNHKIQRGPTEWPKRKKAKENEEDVRDGRAGSGAGGPFQTWRVNGTRCPKGSIPVRRSTVNDVLRAKSIFDYGKKKRPILLDRQIDAPDIVSGNGHESGQSGALW

Homology

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BLAST of Carg25507-RA vs. NCBI nr
Match: KAG7023902.1 (hypothetical protein SDJN02_14929 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 379.4 bits (973), Expect = 1.8e-101
Identity = 186/186 (100.00%), Postives = 186/186 (100.00%), Query Frame = 0


Query: 1   MDHLLPFALFLSLFLLLIQRFPLVCGLNFSSKQVSSLRLDRIQRHLDTINKPPLLTIQSP 60
           MDHLLPFALFLSLFLLLIQRFPLVCGLNFSSKQVSSLRLDRIQRHLDTINKPPLLTIQSP
Sbjct: 1   MDHLLPFALFLSLFLLLIQRFPLVCGLNFSSKQVSSLRLDRIQRHLDTINKPPLLTIQSP 60

Query: 61  DGDIIDCVHKRKQPALDHPLLKNHKIQRGPTEWPKRKKAKENEEDVRDGRAGSGAGGPFQ 120
           DGDIIDCVHKRKQPALDHPLLKNHKIQRGPTEWPKRKKAKENEEDVRDGRAGSGAGGPFQ
Sbjct: 61  DGDIIDCVHKRKQPALDHPLLKNHKIQRGPTEWPKRKKAKENEEDVRDGRAGSGAGGPFQ 120

Query: 121 TWRVNGTRCPKGSIPVRRSTVNDVLRAKSIFDYGKKKRPILLDRQIDAPDIVSGNGHESG 180
           TWRVNGTRCPKGSIPVRRSTVNDVLRAKSIFDYGKKKRPILLDRQIDAPDIVSGNGHESG
Sbjct: 121 TWRVNGTRCPKGSIPVRRSTVNDVLRAKSIFDYGKKKRPILLDRQIDAPDIVSGNGHESG 180

Query: 181 QSGALW 187
           QSGALW
Sbjct: 181 QSGALW 186

[Close]

BLAST of Carg25507-RA vs. NCBI nr
Match: KAG6590299.1 (hypothetical protein SDJN03_15722, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 362.5 bits (929), Expect = 2.2e-96
Identity = 178/178 (100.00%), Postives = 178/178 (100.00%), Query Frame = 0


Query: 1   MDHLLPFALFLSLFLLLIQRFPLVCGLNFSSKQVSSLRLDRIQRHLDTINKPPLLTIQSP 60
           MDHLLPFALFLSLFLLLIQRFPLVCGLNFSSKQVSSLRLDRIQRHLDTINKPPLLTIQSP
Sbjct: 1   MDHLLPFALFLSLFLLLIQRFPLVCGLNFSSKQVSSLRLDRIQRHLDTINKPPLLTIQSP 60

Query: 61  DGDIIDCVHKRKQPALDHPLLKNHKIQRGPTEWPKRKKAKENEEDVRDGRAGSGAGGPFQ 120
           DGDIIDCVHKRKQPALDHPLLKNHKIQRGPTEWPKRKKAKENEEDVRDGRAGSGAGGPFQ
Sbjct: 61  DGDIIDCVHKRKQPALDHPLLKNHKIQRGPTEWPKRKKAKENEEDVRDGRAGSGAGGPFQ 120

Query: 121 TWRVNGTRCPKGSIPVRRSTVNDVLRAKSIFDYGKKKRPILLDRQIDAPDIVSGNGHE 179
           TWRVNGTRCPKGSIPVRRSTVNDVLRAKSIFDYGKKKRPILLDRQIDAPDIVSGNGHE
Sbjct: 121 TWRVNGTRCPKGSIPVRRSTVNDVLRAKSIFDYGKKKRPILLDRQIDAPDIVSGNGHE 178

[Close]

BLAST of Carg25507-RA vs. NCBI nr
Match: XP_022961080.1 (uncharacterized protein LOC111461698 [Cucurbita moschata])

HSP 1 Score: 359.0 bits (920), Expect = 2.5e-95
Identity = 175/178 (98.31%), Postives = 176/178 (98.88%), Query Frame = 0


Query: 1   MDHLLPFALFLSLFLLLIQRFPLVCGLNFSSKQVSSLRLDRIQRHLDTINKPPLLTIQSP 60
           MDHLLPFALFLSLFLLLIQRFPLVCGLNFSSKQVSSLRLDRIQRHLDTINKPPLLTIQSP
Sbjct: 1   MDHLLPFALFLSLFLLLIQRFPLVCGLNFSSKQVSSLRLDRIQRHLDTINKPPLLTIQSP 60

Query: 61  DGDIIDCVHKRKQPALDHPLLKNHKIQRGPTEWPKRKKAKENEEDVRDGRAGSGAGGPFQ 120
           DGDIIDCVHKRKQPALDHPLLKNHKIQRGPTEWPKRKK KENEEDVRDGRAGSGAGGPFQ
Sbjct: 61  DGDIIDCVHKRKQPALDHPLLKNHKIQRGPTEWPKRKKVKENEEDVRDGRAGSGAGGPFQ 120

Query: 121 TWRVNGTRCPKGSIPVRRSTVNDVLRAKSIFDYGKKKRPILLDRQIDAPDIVSGNGHE 179
           TWRVNGTRCPKGSIPVRRSTVNDVLR KSIFDYGKKKRPILLDRQIDAPD+VSGNGHE
Sbjct: 121 TWRVNGTRCPKGSIPVRRSTVNDVLRTKSIFDYGKKKRPILLDRQIDAPDVVSGNGHE 178

[Close]

BLAST of Carg25507-RA vs. NCBI nr
Match: XP_022988120.1 (uncharacterized protein LOC111485460 [Cucurbita maxima])

HSP 1 Score: 356.3 bits (913), Expect = 1.6e-94
Identity = 174/178 (97.75%), Postives = 175/178 (98.31%), Query Frame = 0


Query: 1   MDHLLPFALFLSLFLLLIQRFPLVCGLNFSSKQVSSLRLDRIQRHLDTINKPPLLTIQSP 60
           MDHLLPFALF SLFLLLIQRFPLVCGLNFSSKQVSSLRLDRIQRHLDTINKPPLLTIQSP
Sbjct: 1   MDHLLPFALFFSLFLLLIQRFPLVCGLNFSSKQVSSLRLDRIQRHLDTINKPPLLTIQSP 60

Query: 61  DGDIIDCVHKRKQPALDHPLLKNHKIQRGPTEWPKRKKAKENEEDVRDGRAGSGAGGPFQ 120
           DGDIIDCVHKRKQPALDHPLLKNHKIQRGPTEWPK KK KENEEDVRDGRAGSGAGGPFQ
Sbjct: 61  DGDIIDCVHKRKQPALDHPLLKNHKIQRGPTEWPKGKKVKENEEDVRDGRAGSGAGGPFQ 120

Query: 121 TWRVNGTRCPKGSIPVRRSTVNDVLRAKSIFDYGKKKRPILLDRQIDAPDIVSGNGHE 179
           TWRVNGTRCPKGSIPVRRSTVNDVLRAKSIFDYGKKKRPILLDRQIDAPD+VSGNGHE
Sbjct: 121 TWRVNGTRCPKGSIPVRRSTVNDVLRAKSIFDYGKKKRPILLDRQIDAPDVVSGNGHE 178

[Close]

BLAST of Carg25507-RA vs. NCBI nr
Match: XP_023516458.1 (uncharacterized protein LOC111780317 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 353.2 bits (905), Expect = 1.4e-93
Identity = 172/176 (97.73%), Postives = 174/176 (98.86%), Query Frame = 0


Query: 3   HLLPFALFLSLFLLLIQRFPLVCGLNFSSKQVSSLRLDRIQRHLDTINKPPLLTIQSPDG 62
           HLLPFALF SLFLLLIQRFPLVCGLNFSSKQVSSLRLDRIQRHLDTINKPPLLTIQSPDG
Sbjct: 4   HLLPFALFFSLFLLLIQRFPLVCGLNFSSKQVSSLRLDRIQRHLDTINKPPLLTIQSPDG 63

Query: 63  DIIDCVHKRKQPALDHPLLKNHKIQRGPTEWPKRKKAKENEEDVRDGRAGSGAGGPFQTW 122
           DIIDCVHKRKQPALDHPLLKNHKIQRGPTEWP+RKK KENEEDVRDGRAGSGAGGPFQTW
Sbjct: 64  DIIDCVHKRKQPALDHPLLKNHKIQRGPTEWPRRKKVKENEEDVRDGRAGSGAGGPFQTW 123

Query: 123 RVNGTRCPKGSIPVRRSTVNDVLRAKSIFDYGKKKRPILLDRQIDAPDIVSGNGHE 179
           RVNGTRCPKGSIPVRRSTVNDVLRAKSIFDYGKKKRPILLDRQIDAPD+VSGNGHE
Sbjct: 124 RVNGTRCPKGSIPVRRSTVNDVLRAKSIFDYGKKKRPILLDRQIDAPDVVSGNGHE 179

[Close]

BLAST of Carg25507-RA vs. ExPASy TrEMBL
Match: A0A6J1HAZ7 (uncharacterized protein LOC111461698 OS=Cucurbita moschata OX=3662 GN=LOC111461698 PE=4 SV=1)

HSP 1 Score: 359.0 bits (920), Expect = 1.2e-95
Identity = 175/178 (98.31%), Postives = 176/178 (98.88%), Query Frame = 0


Query: 1   MDHLLPFALFLSLFLLLIQRFPLVCGLNFSSKQVSSLRLDRIQRHLDTINKPPLLTIQSP 60
           MDHLLPFALFLSLFLLLIQRFPLVCGLNFSSKQVSSLRLDRIQRHLDTINKPPLLTIQSP
Sbjct: 1   MDHLLPFALFLSLFLLLIQRFPLVCGLNFSSKQVSSLRLDRIQRHLDTINKPPLLTIQSP 60

Query: 61  DGDIIDCVHKRKQPALDHPLLKNHKIQRGPTEWPKRKKAKENEEDVRDGRAGSGAGGPFQ 120
           DGDIIDCVHKRKQPALDHPLLKNHKIQRGPTEWPKRKK KENEEDVRDGRAGSGAGGPFQ
Sbjct: 61  DGDIIDCVHKRKQPALDHPLLKNHKIQRGPTEWPKRKKVKENEEDVRDGRAGSGAGGPFQ 120

Query: 121 TWRVNGTRCPKGSIPVRRSTVNDVLRAKSIFDYGKKKRPILLDRQIDAPDIVSGNGHE 179
           TWRVNGTRCPKGSIPVRRSTVNDVLR KSIFDYGKKKRPILLDRQIDAPD+VSGNGHE
Sbjct: 121 TWRVNGTRCPKGSIPVRRSTVNDVLRTKSIFDYGKKKRPILLDRQIDAPDVVSGNGHE 178

[Close]

BLAST of Carg25507-RA vs. ExPASy TrEMBL
Match: A0A6J1JIQ1 (uncharacterized protein LOC111485460 OS=Cucurbita maxima OX=3661 GN=LOC111485460 PE=4 SV=1)

HSP 1 Score: 356.3 bits (913), Expect = 7.8e-95
Identity = 174/178 (97.75%), Postives = 175/178 (98.31%), Query Frame = 0


Query: 1   MDHLLPFALFLSLFLLLIQRFPLVCGLNFSSKQVSSLRLDRIQRHLDTINKPPLLTIQSP 60
           MDHLLPFALF SLFLLLIQRFPLVCGLNFSSKQVSSLRLDRIQRHLDTINKPPLLTIQSP
Sbjct: 1   MDHLLPFALFFSLFLLLIQRFPLVCGLNFSSKQVSSLRLDRIQRHLDTINKPPLLTIQSP 60

Query: 61  DGDIIDCVHKRKQPALDHPLLKNHKIQRGPTEWPKRKKAKENEEDVRDGRAGSGAGGPFQ 120
           DGDIIDCVHKRKQPALDHPLLKNHKIQRGPTEWPK KK KENEEDVRDGRAGSGAGGPFQ
Sbjct: 61  DGDIIDCVHKRKQPALDHPLLKNHKIQRGPTEWPKGKKVKENEEDVRDGRAGSGAGGPFQ 120

Query: 121 TWRVNGTRCPKGSIPVRRSTVNDVLRAKSIFDYGKKKRPILLDRQIDAPDIVSGNGHE 179
           TWRVNGTRCPKGSIPVRRSTVNDVLRAKSIFDYGKKKRPILLDRQIDAPD+VSGNGHE
Sbjct: 121 TWRVNGTRCPKGSIPVRRSTVNDVLRAKSIFDYGKKKRPILLDRQIDAPDVVSGNGHE 178

[Close]

BLAST of Carg25507-RA vs. ExPASy TrEMBL
Match: A0A6J1DDR6 (uncharacterized protein LOC111019590 OS=Momordica charantia OX=3673 GN=LOC111019590 PE=4 SV=1)

HSP 1 Score: 290.0 bits (741), Expect = 6.8e-75
Identity = 143/177 (80.79%), Postives = 157/177 (88.70%), Query Frame = 0


Query: 6   PFALFLSLFLLLIQRFPLVCGLNFSSKQVSSLRLDRIQRHLDTINKPPLLTIQSPDGDII 65
           P AL L+L L++ +RF LV GLN++ KQVSSLRLDRIQRHLD INKPPLLTIQSPDGDII
Sbjct: 13  PLALALALVLVVFERFSLVFGLNYTYKQVSSLRLDRIQRHLDNINKPPLLTIQSPDGDII 72

Query: 66  DCVHKRKQPALDHPLLKNHKIQRGPTEWPKRKKAKENEE----DVRDGRAGSGAGGPFQT 125
           DCVHKRKQPALDHPLLKNHKIQRGPTEWP+ KK KE  E    D  +GR GSGAGG +QT
Sbjct: 73  DCVHKRKQPALDHPLLKNHKIQRGPTEWPRVKKMKEKNEVKDGDGSEGRRGSGAGGAWQT 132

Query: 126 WRVNGTRCPKGSIPVRRSTVNDVLRAKSIFDYGKKKRPILLDRQIDAPDIVSGNGHE 179
           WRVNGTRCPKGSIPVRRSTVNDVLRAKS+FD+GKK+RPILLDRQ+DAPD+VSGNGHE
Sbjct: 133 WRVNGTRCPKGSIPVRRSTVNDVLRAKSLFDFGKKRRPILLDRQMDAPDVVSGNGHE 189

[Close]

BLAST of Carg25507-RA vs. ExPASy TrEMBL
Match: A0A1S3B8R5 (uncharacterized protein LOC103487273 OS=Cucumis melo OX=3656 GN=LOC103487273 PE=4 SV=1)

HSP 1 Score: 283.9 bits (725), Expect = 4.9e-73
Identity = 137/178 (76.97%), Postives = 158/178 (88.76%), Query Frame = 0


Query: 1   MDHLLPFALFLSLFLLLIQRFPLVCGLNFSSKQVSSLRLDRIQRHLDTINKPPLLTIQSP 60
           + +LLPF L      ++ QRF LVCGLN++ +++SSLRLDRIQRHLD+INKPPLLTIQSP
Sbjct: 13  ISNLLPFGLIFC--FVVTQRFTLVCGLNYTYQKLSSLRLDRIQRHLDSINKPPLLTIQSP 72

Query: 61  DGDIIDCVHKRKQPALDHPLLKNHKIQRGPTEWPKRKKAKENEEDVRDGRAGSGAGGPFQ 120
           DGDIIDCVHKRKQPALDHPLLKNHKIQRGPTEWPK K  KEN+E+V + RAGSGA   FQ
Sbjct: 73  DGDIIDCVHKRKQPALDHPLLKNHKIQRGPTEWPKTKVVKENKEEVGERRAGSGALAAFQ 132

Query: 121 TWRVNGTRCPKGSIPVRRSTVNDVLRAKSIFDYGKKKRPILLDRQIDAPDIVSGNGHE 179
           TWRVNGTRCPKG+IPVRR+TV DVLR+KS+FD+GKK+RPILLDR+IDAPD+VSGNGHE
Sbjct: 133 TWRVNGTRCPKGTIPVRRTTVKDVLRSKSLFDFGKKRRPILLDRKIDAPDVVSGNGHE 188

[Close]

BLAST of Carg25507-RA vs. ExPASy TrEMBL
Match: A0A0A0LXY9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G665910 PE=4 SV=1)

HSP 1 Score: 282.7 bits (722), Expect = 1.1e-72
Identity = 138/179 (77.09%), Postives = 157/179 (87.71%), Query Frame = 0


Query: 1   MDHLLPFALFLSLFLLLIQRFPLVCGLNFS-SKQVSSLRLDRIQRHLDTINKPPLLTIQS 60
           + +LLPF L      ++ QRF LVCGLN++  K +SSLRLDRIQRHLD+INKPPLLTIQS
Sbjct: 14  ISNLLPFGLIFC--FVITQRFTLVCGLNYTYQKHLSSLRLDRIQRHLDSINKPPLLTIQS 73

Query: 61  PDGDIIDCVHKRKQPALDHPLLKNHKIQRGPTEWPKRKKAKENEEDVRDGRAGSGAGGPF 120
           PDGDIIDCVHKRKQPALDHPLLKNHKIQRGPTEWPK K  KEN+E+V + RAGSGA   F
Sbjct: 74  PDGDIIDCVHKRKQPALDHPLLKNHKIQRGPTEWPKTKVGKENKEEVSERRAGSGALASF 133

Query: 121 QTWRVNGTRCPKGSIPVRRSTVNDVLRAKSIFDYGKKKRPILLDRQIDAPDIVSGNGHE 179
           QTWRVNGTRCPKG++PVRR+TV DVLR+KS+FD+GKKKRPILLDR+IDAPD+VSGNGHE
Sbjct: 134 QTWRVNGTRCPKGTVPVRRTTVKDVLRSKSLFDFGKKKRPILLDRKIDAPDVVSGNGHE 190

[Close]

BLAST of Carg25507-RA vs. TAIR 10
Match: AT5G18460.1 (Protein of Unknown Function (DUF239) )

HSP 1 Score: 188.0 bits (476), Expect = 7.0e-48
Identity = 100/177 (56.50%), Postives = 130/177 (73.45%), Query Frame = 0


Query: 4   LLPFALFLSLFLLLIQRFPLVCGLNFSS--KQVSSLRLDRIQRHLDTINKPPLLTIQSPD 63
           LL F L +S  L L Q+   +   N +   +QVSSLRL RIQ+HL+ INK P+ TIQSPD
Sbjct: 12  LLLFLLIVS--LSLSQKVRHISAFNDTKPYRQVSSLRLARIQKHLNKINKSPVFTIQSPD 71

Query: 64  GDIIDCVHKRKQPALDHPLLKNHKIQRGPTEWPKRKKAKENEEDVRDGRAGSGAGGPFQT 123
           GD+IDCV KRKQPALDHPLLK+HKIQ+ P + P   K K  ++DV++  A +   G +Q 
Sbjct: 72  GDVIDCVPKRKQPALDHPLLKHHKIQKAPKKMP---KMKGKDDDVKE--AENVLEGAWQM 131

Query: 124 WRVNGTRCPKGSIPVRRSTVNDVLRAKSIFDYGKKKRPILLDRQIDAPDIVSGNGHE 179
           W VNGTRCPKG++P+RR+T+NDVLRAKS+FD+GKK+R I LD++ + PD +  NGHE
Sbjct: 132 WHVNGTRCPKGTVPIRRNTMNDVLRAKSLFDFGKKRRSIYLDQRTEKPDALGTNGHE 181

[Close]

BLAST of Carg25507-RA vs. TAIR 10
Match: AT5G56530.1 (Protein of Unknown Function (DUF239) )

HSP 1 Score: 117.1 bits (292), Expect = 1.5e-26
Identity = 63/138 (45.65%), Postives = 85/138 (61.59%), Query Frame = 0


Query: 42  IQRHLDTINKPPLLTIQSPDGDIIDCVHKRKQPALDHPLLKNHKIQRGPTEWPKRKKAKE 101
           + +HL+ +NKP + +IQSPDGDIIDCVH  KQPA DHP LK+HKIQ GP+  P+    + 
Sbjct: 42  VHKHLNRLNKPAVKSIQSPDGDIIDCVHISKQPAFDHPFLKDHKIQMGPSYTPESLFGES 101

Query: 102 NEEDVRDGRAGSGAGGPFQTWRVNGTRCPKGSIPVRRSTVNDVLRAKSIFDYGKKKR-PI 161
              +    +         Q W  NG  C +G+IPVRR+   DVLRA S+  YGKKK   +
Sbjct: 102 KVSE----KPKESVNPITQLWHQNGV-CSEGTIPVRRTKKEDVLRASSVKRYGKKKHLSV 161

Query: 162 LLDRQIDAPDIVSGNGHE 179
            L R  D PD+++ +GH+
Sbjct: 162 PLPRSAD-PDLINQSGHQ 173

[Close]

BLAST of Carg25507-RA vs. TAIR 10
Match: AT5G56530.2 (Protein of Unknown Function (DUF239) )

HSP 1 Score: 117.1 bits (292), Expect = 1.5e-26
Identity = 63/138 (45.65%), Postives = 85/138 (61.59%), Query Frame = 0


Query: 42  IQRHLDTINKPPLLTIQSPDGDIIDCVHKRKQPALDHPLLKNHKIQRGPTEWPKRKKAKE 101
           + +HL+ +NKP + +IQSPDGDIIDCVH  KQPA DHP LK+HKIQ GP+  P+    + 
Sbjct: 42  VHKHLNRLNKPAVKSIQSPDGDIIDCVHISKQPAFDHPFLKDHKIQMGPSYTPESLFGES 101

Query: 102 NEEDVRDGRAGSGAGGPFQTWRVNGTRCPKGSIPVRRSTVNDVLRAKSIFDYGKKKR-PI 161
              +    +         Q W  NG  C +G+IPVRR+   DVLRA S+  YGKKK   +
Sbjct: 102 KVSE----KPKESVNPITQLWHQNGV-CSEGTIPVRRTKKEDVLRASSVKRYGKKKHLSV 161

Query: 162 LLDRQIDAPDIVSGNGHE 179
            L R  D PD+++ +GH+
Sbjct: 162 PLPRSAD-PDLINQSGHQ 173

[Close]

BLAST of Carg25507-RA vs. TAIR 10
Match: AT3G13510.1 (Protein of Unknown Function (DUF239) )

HSP 1 Score: 113.2 bits (282), Expect = 2.2e-25
Identity = 63/144 (43.75%), Postives = 89/144 (61.81%), Query Frame = 0


Query: 35  SSLRLDRIQRHLDTINKPPLLTIQSPDGDIIDCVHKRKQPALDHPLLKNHKIQRGPTEWP 94
           SS +   +++HL+ +NKPP+ TIQSPDGDIIDC+   KQPA DHP LK+HKIQ  P+  P
Sbjct: 34  SSRQKFEVKKHLNRLNKPPVKTIQSPDGDIIDCIPISKQPAFDHPFLKDHKIQMRPSYHP 93

Query: 95  KRKKAKENEEDVRDGRAGSGAGGPFQTWRVNGTRCPKGSIPVRRSTVNDVLRAKSIFDYG 154
              +   ++  V     G     P Q W   G +C +G+IP+RR+  +DVLRA S+  YG
Sbjct: 94  ---EGLFDDNKVSAEPKGKETHIP-QLWHRYG-KCTEGTIPMRRTREDDVLRASSVKRYG 153

Query: 155 KKKRPILLDRQIDAPDIVSGNGHE 179
           KKK   +   +   PD+++ NGH+
Sbjct: 154 KKKHRSVPIPKSAEPDLINQNGHQ 172

[Close]

BLAST of Carg25507-RA vs. TAIR 10
Match: AT2G44250.1 (Protein of Unknown Function (DUF239) )

HSP 1 Score: 106.7 bits (265), Expect = 2.1e-23
Identity = 64/159 (40.25%), Postives = 85/159 (53.46%), Query Frame = 0


Query: 13  LFLLLIQRFPLVCGLNFSSK-QVSSLRLDRIQRHLDTINKPPLLTIQSPDGDIIDCVHKR 72
           +F LL     LV  +  + K  VS +   +I++ L+ +NKP + +I SPDGDIIDCV   
Sbjct: 8   IFFLLWVIIALVVEITLAGKITVSDIHEQKIEQRLNQLNKPAVKSIHSPDGDIIDCVWIY 67

Query: 73  KQPALDHPLLKNHKIQRGPTEWPKRKKAKENEEDVRDGRAGSGAGGPFQTWRVNGTRCPK 132
            QPA DHPLLKNH IQ  P     R K   N+ D+             Q WR  G  CPK
Sbjct: 68  HQPAFDHPLLKNHTIQMRPKSDSTRDKTGGNKTDI-----------IHQLWRTKG-ECPK 127

Query: 133 GSIPVRRSTVNDVLRAKSIFDYGKKKRPILLDRQIDAPD 171
            +IP+RR T +D+LR+ SI  +G+K  P +       PD
Sbjct: 128 NTIPIRRRTRDDLLRSDSIKTHGRKNPPTISPTTYHLPD 154

The following BLAST results are available for this feature:

BLAST of Carg25507-RA vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7023902.1	1.8e-101	100.00	hypothetical protein SDJN02_14929 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6590299.1	2.2e-96	100.00	hypothetical protein SDJN03_15722, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022961080.1	2.5e-95	98.31	uncharacterized protein LOC111461698 [Cucurbita moschata]	[more]
XP_022988120.1	1.6e-94	97.75	uncharacterized protein LOC111485460 [Cucurbita maxima]	[more]
XP_023516458.1	1.4e-93	97.73	uncharacterized protein LOC111780317 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Carg25507-RA vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Carg25507-RA vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HAZ7	1.2e-95	98.31	uncharacterized protein LOC111461698 OS=Cucurbita moschata OX=3662 GN=LOC1114616...	[more]
A0A6J1JIQ1	7.8e-95	97.75	uncharacterized protein LOC111485460 OS=Cucurbita maxima OX=3661 GN=LOC111485460...	[more]
A0A6J1DDR6	6.8e-75	80.79	uncharacterized protein LOC111019590 OS=Momordica charantia OX=3673 GN=LOC111019...	[more]
A0A1S3B8R5	4.9e-73	76.97	uncharacterized protein LOC103487273 OS=Cucumis melo OX=3656 GN=LOC103487273 PE=...	[more]
A0A0A0LXY9	1.1e-72	77.09	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G665910 PE=4 SV=1	[more]

BLAST of Carg25507-RA vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G18460.1	7.0e-48	56.50	Protein of Unknown Function (DUF239)	[more]
AT5G56530.1	1.5e-26	45.65	Protein of Unknown Function (DUF239)	[more]
AT5G56530.2	1.5e-26	45.65	Protein of Unknown Function (DUF239)	[more]
AT3G13510.1	2.2e-25	43.75	Protein of Unknown Function (DUF239)	[more]
AT2G44250.1	2.1e-23	40.25	Protein of Unknown Function (DUF239)	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025521	Neprosin activation peptide	PFAM	PF14365	Neprosin_AP	coord: 56..178 e-value: 6.1E-38 score: 130.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 87..122
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 87..110
None	No IPR available	PANTHER	PTHR31589	PROTEIN, PUTATIVE (DUF239)-RELATED-RELATED	coord: 5..179
None	No IPR available	PANTHER	PTHR31589:SF77	CARBOXYL-TERMINAL PEPTIDASE	coord: 5..179

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Carg25507	Carg25507	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg25507-RA:1	Carg25507-RA:1	exon
Carg25507-RA:2	Carg25507-RA:2	exon
Carg25507-RA:3	Carg25507-RA:3	exon
Carg25507-RA:4	Carg25507-RA:4	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg25507-RA:five_prime_utr	Carg25507-RA:five_prime_utr	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg25507-RA:cds	Carg25507-RA:cds	CDS
Carg25507-RA:cds	Carg25507-RA:cds_2	CDS
Carg25507-RA:cds	Carg25507-RA:cds_3	CDS
Carg25507-RA:cds	Carg25507-RA:cds_4	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg25507-RA:three_prime_utr	Carg25507-RA:three_prime_utr	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Carg25507-RA	Carg25507-RA-protein	polypeptide