Carg25507 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATTAATGTTCTTCGTGTTCTTCGTGTTCTAAGAACCCTAATGGATCATCTTCTTCCTTTTGCGTTGTTCTTATCTCTTTTTCTTCTTCTTATTCAAAGATTCCCTCTGGTTTGTGGCCTCAATTTTAGTTCTAAACAAGTTAGCAGCTTGAGATTGGACAGGATTCAAAGGCATCTGGACACCATTAACAAGCCTCCTCTTCTCACCATTCAGGTCATCAATTTCTCCCCTTTTTTCTCTTCAATCTTCCATTTTTTTAATTGGGTTTCTAAAAGTTTGCATTTTTATGTAATGGGTATATCAAATTTATGCATTTTTATACATTTTTGCCATTTTTTTTTTGTTGGTTTGTACCAAAAAAATCGAACCTTTTCGCAATGGGTATTTGAAATGTTTGTTCTTCCATATGTTTATGTAGTCCCATCTCTAGCAGATATTGTCGTTTTTTAGTTTTTTCTTTCAGACTTCCCCAAAACATTAAAACTAATTTGCTAGGAGAAGGTTTCCACACGAACTGTGTTTTGTTGTCCTCTCCCACTATTATTCGACATCACAATTTTTGAGATTTTTTTTTTCTCTTTGCTAATACTTTTCCATTTTATTTATTCAGAGCCCAGATGGTGATATTATAGACTGTGTTCATAAAAGAAAACAGCCTGCCTTGGATCATCCCCTCTTGAAGAACCACAAGATTCAGGTCCAAACACTCTCTAAATACAATAATAGTAATTATAATTATTATAAATTTCATATCAATTCTTAAACTTTGGAACGGATTCATTTTCGATCTATTGTTTAACAAATAGTTTATACAATCGGGGACGTTTATCAACTAAAACAGTACTTAATCCAAACCATAAACATTGAGCTACATTATATATTTTTTTTTCCGATTTGGGTCATGTTAAATTTTTAGTTATTCGAAAAATTTGGTTCGATTTGTAGGTTGACATTTTTTTGGTCAGGTCTCAAAATATAAGGTTACAATCCTATTCATAATTTTTAAAAATATTAAGAATATCTAACGTTTATAATTGATGATAAATGTTTGATATTTGAATTTTATGAAATTTTAATTATTAATACGATCGAGAATAAATAATATTTTTTAAAATATATTAAAAAAATAACCCGACAACCAGATTAAGATTTGTGAACTCTATTTAAGTTAGTCGGGTCACCAACTTAACTAACCCGTGTACACTCTTGATTTAACGTGCCCTCGTCCTATAGAAATTAACAACTAAAATAACAATTTAAAAACTTGTAAAAAAAAAATTAAAAATATATAATTATTAATTTATTGGTGCAGAGAGGGCCAACAGAGTGGCCAAAAAGGAAGAAGGCGAAAGAGAATGAAGAAGATGTGAGGGATGGGAGGGCAGGATCAGGTGCGGGAGGTCCATTTCAAACTTGGCGTGTGAACGGGACACGGTGTCCGAAAGGGAGTATTCCAGTGCGACGCAGTACAGTGAACGACGTGCTAAGAGCCAAGTCAATTTTTGACTACGGGAAGAAAAAACGACCAATTCTCCTTGATCGACAAATCGACGCTCCTGATATAGTCAGTGGGAATGGTCACGAGGTACCTGATCTTTCCCCCTTTTTTCTCCTTTTTCATAGCATTTATGAATGGATTCTTTTCCTTCACTTCAACTCTATATATTTTAGGTCTATCATTAAATTTTTATTACATTAAAATAATAATAATATAATAATAAATAAATAAATTTTTGGTTTTGGTTTTTTTTTTTTTTTTTTTTTGCTTAATTTTGAAATTTTTTATTTAATATCAATTAATATATTTATTAGAAGATTGAGAGAGGCTTAAAATAACTAATTTAGCTAAAAAAAATTATTTCAATGATTTTATAAGGTAATTATAAATATTTATTAACCTCAAATAACATAGAAATTGCAAAATATAATTTTTTTTTGCTGAAAAAAATATTTAATATATTTAAAAATATCCCAACTTGGAAAAATAAAATTTTAAATAAGCATCAATAAAAAAAATATTGAAAATTTGACTGGTCAAAGGGTTGATTAGTAATTAACTTAAAGCAAACATAATAAATGACCTATTAAAAAAAGCTTAAACTAATTGACTTTATAACTGTCAGTTTATATATATATATATATATTTACCCTAAAAATCTTTTTATTTGTTTTTAATTTGCTAAATTTTATGCAATTTTTATGAATTTAATTTGATGATGATTATGTGGACGGTTGCATATAAAATAGCATGCGATCGCATACACGGAATCATCAGAGATGTACGGAGCTAAGGCAACAATAAACGTGTGGGACCCGTCAATTCAAGTGGTCAACGAGTTTAGCCTCTCTCAGGTTTGGATCATCTCGGGATCATTCGACGGCTCTGATCTCAACAGCATAGAAGCTGGCTGGCAGGTATTTTTTTTACATTTTCTGCACCCTCCCGCACACAATCCCATACCACTCCCCATTTTCATAAAATAAAATAATAATAAAAAAGTATTTTCTTTTTTCTTTTTTTTATTAACTTGTTGATTTTAATGCAATTTCAGTCCTTTGTTGAATCCAAAGCTTATTCAATTTTCTAGAAGTTTGTTTGATTCTTTTTCCTTATATATATATATATATATATATATATATATATTTGTTATTTTAAGAAAATTTTAAGATAATTATAAATAAAATCAAGTTAAAAAAACTGGTTGATTATTAATGTTTTAAGTCAACTGTAATTACCCTTATTCGTTTGTTAAGATTCAATTATTATATGAAAAATAATGCACGTATTTTTTTTTCTTTGTTAAAAATACATGATTTATGCAATTAAATGTAATTGAGCTCTGTGTTTTAGTTAGAACATTATAAATATATTTTTTAATTTGTATTTATCGAGCTTATTGGATTTTCTAAAGTCTTGATTATTCTACTAGTCAGGTCAGTCCGGAGCTTTATGGTGACAGCAGACCTAGATTATTCACGTATTGGACGGTTCGATCTCTAATCTCACTATTATTTTTAAATTATTTTTTTTAAGTCGTAGGAATTTAAGATAATAAACTTTC ATTAATGTTCTTCGTGTTCTTCGTGTTCTAAGAACCCTAATGGATCATCTTCTTCCTTTTGCGTTGTTCTTATCTCTTTTTCTTCTTCTTATTCAAAGATTCCCTCTGGTTTGTGGCCTCAATTTTAGTTCTAAACAAGTTAGCAGCTTGAGATTGGACAGGATTCAAAGGCATCTGGACACCATTAACAAGCCTCCTCTTCTCACCATTCAGAGCCCAGATGGTGATATTATAGACTGTGTTCATAAAAGAAAACAGCCTGCCTTGGATCATCCCCTCTTGAAGAACCACAAGATTCAGAGAGGGCCAACAGAGTGGCCAAAAAGGAAGAAGGCGAAAGAGAATGAAGAAGATGTGAGGGATGGGAGGGCAGGATCAGGTGCGGGAGGTCCATTTCAAACTTGGCGTGTGAACGGGACACGGTGTCCGAAAGGGAGTATTCCAGTGCGACGCAGTACAGTGAACGACGTGCTAAGAGCCAAGTCAATTTTTGACTACGGGAAGAAAAAACGACCAATTCTCCTTGATCGACAAATCGACGCTCCTGATATAGTCAGTGGGAATGGTCACGAGTCAGGTCAGTCCGGAGCTTTATGGTGACAGCAGACCTAGATTATTCACGTATTGGACGGTTCGATCTCTAATCTCACTATTATTTTTAAATTATTTTTTTTAAGTCGTAGGAATTTAAGATAATAAACTTTC ATGGATCATCTTCTTCCTTTTGCGTTGTTCTTATCTCTTTTTCTTCTTCTTATTCAAAGATTCCCTCTGGTTTGTGGCCTCAATTTTAGTTCTAAACAAGTTAGCAGCTTGAGATTGGACAGGATTCAAAGGCATCTGGACACCATTAACAAGCCTCCTCTTCTCACCATTCAGAGCCCAGATGGTGATATTATAGACTGTGTTCATAAAAGAAAACAGCCTGCCTTGGATCATCCCCTCTTGAAGAACCACAAGATTCAGAGAGGGCCAACAGAGTGGCCAAAAAGGAAGAAGGCGAAAGAGAATGAAGAAGATGTGAGGGATGGGAGGGCAGGATCAGGTGCGGGAGGTCCATTTCAAACTTGGCGTGTGAACGGGACACGGTGTCCGAAAGGGAGTATTCCAGTGCGACGCAGTACAGTGAACGACGTGCTAAGAGCCAAGTCAATTTTTGACTACGGGAAGAAAAAACGACCAATTCTCCTTGATCGACAAATCGACGCTCCTGATATAGTCAGTGGGAATGGTCACGAGTCAGGTCAGTCCGGAGCTTTATGGTGA MDHLLPFALFLSLFLLLIQRFPLVCGLNFSSKQVSSLRLDRIQRHLDTINKPPLLTIQSPDGDIIDCVHKRKQPALDHPLLKNHKIQRGPTEWPKRKKAKENEEDVRDGRAGSGAGGPFQTWRVNGTRCPKGSIPVRRSTVNDVLRAKSIFDYGKKKRPILLDRQIDAPDIVSGNGHESGQSGALW Homology
BLAST of Carg25507 vs. NCBI nr
Match: KAG7023902.1 (hypothetical protein SDJN02_14929 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 379.4 bits (973), Expect = 1.8e-101 Identity = 186/186 (100.00%), Postives = 186/186 (100.00%), Query Frame = 0
BLAST of Carg25507 vs. NCBI nr
Match: KAG6590299.1 (hypothetical protein SDJN03_15722, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 362.5 bits (929), Expect = 2.2e-96 Identity = 178/178 (100.00%), Postives = 178/178 (100.00%), Query Frame = 0
BLAST of Carg25507 vs. NCBI nr
Match: XP_022961080.1 (uncharacterized protein LOC111461698 [Cucurbita moschata]) HSP 1 Score: 359.0 bits (920), Expect = 2.5e-95 Identity = 175/178 (98.31%), Postives = 176/178 (98.88%), Query Frame = 0
BLAST of Carg25507 vs. NCBI nr
Match: XP_022988120.1 (uncharacterized protein LOC111485460 [Cucurbita maxima]) HSP 1 Score: 356.3 bits (913), Expect = 1.6e-94 Identity = 174/178 (97.75%), Postives = 175/178 (98.31%), Query Frame = 0
BLAST of Carg25507 vs. NCBI nr
Match: XP_023516458.1 (uncharacterized protein LOC111780317 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 353.2 bits (905), Expect = 1.4e-93 Identity = 172/176 (97.73%), Postives = 174/176 (98.86%), Query Frame = 0
BLAST of Carg25507 vs. ExPASy TrEMBL
Match: A0A6J1HAZ7 (uncharacterized protein LOC111461698 OS=Cucurbita moschata OX=3662 GN=LOC111461698 PE=4 SV=1) HSP 1 Score: 359.0 bits (920), Expect = 1.2e-95 Identity = 175/178 (98.31%), Postives = 176/178 (98.88%), Query Frame = 0
BLAST of Carg25507 vs. ExPASy TrEMBL
Match: A0A6J1JIQ1 (uncharacterized protein LOC111485460 OS=Cucurbita maxima OX=3661 GN=LOC111485460 PE=4 SV=1) HSP 1 Score: 356.3 bits (913), Expect = 7.8e-95 Identity = 174/178 (97.75%), Postives = 175/178 (98.31%), Query Frame = 0
BLAST of Carg25507 vs. ExPASy TrEMBL
Match: A0A6J1DDR6 (uncharacterized protein LOC111019590 OS=Momordica charantia OX=3673 GN=LOC111019590 PE=4 SV=1) HSP 1 Score: 290.0 bits (741), Expect = 6.8e-75 Identity = 143/177 (80.79%), Postives = 157/177 (88.70%), Query Frame = 0
BLAST of Carg25507 vs. ExPASy TrEMBL
Match: A0A1S3B8R5 (uncharacterized protein LOC103487273 OS=Cucumis melo OX=3656 GN=LOC103487273 PE=4 SV=1) HSP 1 Score: 283.9 bits (725), Expect = 4.9e-73 Identity = 137/178 (76.97%), Postives = 158/178 (88.76%), Query Frame = 0
BLAST of Carg25507 vs. ExPASy TrEMBL
Match: A0A0A0LXY9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G665910 PE=4 SV=1) HSP 1 Score: 282.7 bits (722), Expect = 1.1e-72 Identity = 138/179 (77.09%), Postives = 157/179 (87.71%), Query Frame = 0
BLAST of Carg25507 vs. TAIR 10
Match: AT5G18460.1 (Protein of Unknown Function (DUF239) ) HSP 1 Score: 188.0 bits (476), Expect = 7.0e-48 Identity = 100/177 (56.50%), Postives = 130/177 (73.45%), Query Frame = 0
BLAST of Carg25507 vs. TAIR 10
Match: AT5G56530.1 (Protein of Unknown Function (DUF239) ) HSP 1 Score: 117.1 bits (292), Expect = 1.5e-26 Identity = 63/138 (45.65%), Postives = 85/138 (61.59%), Query Frame = 0
BLAST of Carg25507 vs. TAIR 10
Match: AT5G56530.2 (Protein of Unknown Function (DUF239) ) HSP 1 Score: 117.1 bits (292), Expect = 1.5e-26 Identity = 63/138 (45.65%), Postives = 85/138 (61.59%), Query Frame = 0
BLAST of Carg25507 vs. TAIR 10
Match: AT3G13510.1 (Protein of Unknown Function (DUF239) ) HSP 1 Score: 113.2 bits (282), Expect = 2.2e-25 Identity = 63/144 (43.75%), Postives = 89/144 (61.81%), Query Frame = 0
BLAST of Carg25507 vs. TAIR 10
Match: AT2G44250.1 (Protein of Unknown Function (DUF239) ) HSP 1 Score: 106.7 bits (265), Expect = 2.1e-23 Identity = 64/159 (40.25%), Postives = 85/159 (53.46%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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