Carg24380-RA (mRNA) Silver-seed gourd (SMH-JMG-627) v2

Overview
NameCarg24380-RA
TypemRNA
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionRas-related protein Rab-2A
LocationCarg_Chr13: 4444220 .. 4447892 (-)
Sequence length871
RNA-Seq ExpressionCarg24380-RA
SyntenyCarg24380-RA
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCATACGCCTACCTTTTCAAGTACATCATCATTGGTGATACTGGTACGTGTTGGTATTGATGCTTTTGTCGTTTTCGATCTGATTCCTCAATTGTGTCGCTTTGGTTATGGGTTGGTTTGTGCTTAATCTGTTTCTCTAATTTGATGATGTCAACGCTGCTCTGCTTGGTTTCCCTTTTGATTTGGGACTTGCTGTGTTTAGCTTTGTATTGGATGTTGTTTTCTGTTCGTCGATTGATTGTGAGGTTTGAAACTTAATTGTGCTGTGTTCTCCAGGAGTTGGAAAATCATGTCTTCTTCTCCAGTTTACTGATAAGAGATTTCAGCCTGTTCATGACTTGACTATTGGTGTAGAGTTCGGTGCGAGGATGATCACCATCGACAGCAAGCCAATTAAGTTGCAAATTTGGGATACGGTTAGTTATCTCTCTTTCTTTCTTTCCTTCTTTTTCTGGGAGTTTCTTGTTTCAAATCTTTAGATATTTAACTGTGCCACTTGTCTACTGAATTGAATGAGCTCTGTTCTGGTTTATGGATAGTATTTTACCTTTTCTTGGATCCATTTCAAGGAAAAGAATCTGCAATTATACCAGAGAATAGCGGGTGATCTGCTGCTATAAGCTTAATCTTAGTTCGAGTAAAAGGCGAAAACAATAACTAATAGAACTGGGAAGCTTCCATTCATGCTAAGCTTCCATTCATGCTTACTATGTATAGTCTATACTATTTAGTTTATCATTGTAACATGGCTTTGAATCTGAAAAGTTATCTATAAGTTATGCAACACTTATATATGCTCTTAGCTCAAGTGCTCTGCTTAAACTTAGAGAACATACACATAACATAGTACACTTATTCTATTGCTTAATGATAGTTATTCACTATCTGCTTTGTGTGTAATATGATGATCACTATTGAATCAACGTCATGTATTGTTCATTTCTATTATACATATATACCATAAGATTGGTACAGATGTTCGTTCCTTGTACTCTTTCGATTTAGATTTGTCCTTTTGTTTCTTATTAATTTCATCGAGTTTTTCTGAGTCTGAAGTTTCCCAAAAAAATTGCAGGCTGGTCAAGAATCTTTCAGGTCTATTACAAGGTCCTACTATAGAGGGGCTGCTGGTGCCTTGCTTGTCTATGACATCACCAGGTCTTTTTACCTCTTGGTTCCATTCTAACTTAATACTACTTTTGAGTTTTGATGTAGGGATGTTTCTGTACTTCTGTTATTTGTGTTTGATGTCTTATGCAGCCGTTGGGTAAGACCGTTAGTGTGTTTAACCAAGCTGGTTAAGGTCATTACGTTTAGCAGTTGGAACTAGTCAGTTGGTTCGCTTCAGTTAGCTCTTTATAGTATAAATATTCATTGTTTTGGTTGTATGAAATTCATTCCCCTCAGCTACACCAATTTTCTAGTGAATAAGTAAGGGAGGCTTTTGAAATTCATCCCCCAAATGGGTCAGTATGCGGAACCACTGTTTGAAAGATATTTTAGAAACTTGGAGAGGATACTCCTATTCCTTTTGCAATTCATTATTGTTCTTTTCCTGGGGACCTAATATTCAATCAATTAAACCAGTCATATTGAAGTTGAATTATAATTCATGTTGGGAGTGAGAATTTGTAAAACCCATGATAGACAGCAAGTCACCCAAAAGTATAGTCGTGTAGAAAAAGGGAAAAAGGGAGACTGAGTGATATAAGTACGTGAGGATTGGCAGGCGTGTGCGTTATGATTATGTGGCCATATATTATGGTTAGTTATACTTTTTGTGTATGTTGAAGGCTGCTTATGGCAAAGAGGAGGCTATCTTTTTGCATTTTGCTCAATTGTAGCTCCTTCGGGCATAGTGGAGAGGAGGGGAGCTCTTGAAACTCCCTTGGCATTGCCAAAACAGTTAATAGATAATTTGAGGCCTATCGATCCCTGAGTCACCAGGAAAGCTCACACTTCATGAAAGTAAACAAGACTTGGCCAGAAAGGTTATTGGTTAGTGGGACTGACCATTGTGTTAGAAGGTTGTAGATGTAATCTAAAAGAATTTTGGGTGGACAGCATAAAGTTTAAATGTGAATGCTCGAATTTTCTTGGATTAGTTGTGGTTTATTTTTGTCTTGCATAGTTGTAGGTTTTGTGAGAAGGAAATAACTTGAGCAAGACCGTAGTTGTTAAAATAATGCGGTCAGCCAGGTCTGACAGCAGCCAGCTCTAAACTGTTCCAACTTCATGATGTTTGTCGTGATTCAGCCTTCTAGTTTAACTTGATTGACTGCATAAGCTGAAATGGGGCCTCATCATCATGCCCCTAAATTTCCTGAGTCAATGAGGACATCGAACTTAAGGTTACGTGGCTATCATATTTTTCAGGAGGGAGACTTTTAATCACCTGGCTAGCTGGCTTGAAGATGCAAGACAACATGCTAATGCAAACATGACAATAATGCTTATCGGTAACAAGTGTGATCTTGCACACAGAAGGGCTGTCAGCACTGAGGAAGGGGAGCAGTTTGCAAAGGAACATGGTCTAATTTTCATGGAGGCCTCTGCTAAAACTGCTCAAAATGTTGAGGAGGTGATAGAATAGTCATAAATTGCCTTCCAGAAAGTTCAAAATTAGACACTGTTCATCTCTAAGCTAAGAACATGACATAAAGATATAATATTCATCTTTTTTATATATTGTAAACAGTTCTCCGTCTCACAATCTTCGTGATGATCAACAATTTTTACAGGCATTCATACAAACTGCTGCAACCATATATAAGAAGATCCAGGATGGAGTATTTGATGTATCTAATGAGGTATGAAGCTTGCTTTTTAACTTGCTGCTAAATGTGTACGGAAATGTTTTAGTTTTACCATGGCATTTTCTCTTGCGTCACGGTGATCAAAGTGCATCTGATTAGATTGGGGGTCTTGAATTTACTTTTGACTGTGCTACTTCAAGTGGTGTTTCACCGTTAGTCAAAAGTTATTTAGCTGCTTGAATTGAACAATGTTTGGCCAGTGGCATTTAGCGACTGCTATAAGTGACAGAATTTAGATTCGAGTCTCTAGTCTCTTAGAATTTTGTTGTTACAACGGATGAATAGCGATGAGAATGAATGATGTAAGTGATGCTATGTTCCATCTTATGTGCAGTCATATGGGATAAAAGTTGGATATGGTGGAATCCCAGGGCCATCAGGAGGCAGAGATGGTACTACAGCTCAATCTGGTGGTTGTTGCGGTTAAATCTTGCTGCTCAAAAACTAGTACAAATTGTCCACGTTCTCTTTAAATTCCTTTGTTAATTATGAGTGTCAGAAAACGCCCCCTCACCCTCATAAAAGGGCACCATAATAGGTTATCAGGTGTTTATCTAATGGCCCCAAGGGGTGGCTCCGTTGGCAGGGGCTTGGGGTCTGTTGTTATACCAGCTTAATGATCCAAAACTCAAGCCTTCGGGTGAGCTTAATACCAAAAACCCTTGATGTCGCCCGGATTCTGGCCTTGGGCGGGCATCGGTGCCCTTGGGTATAGAGGAACGAAGTTCTAACTCCCAGTTATCCATAAAGAAGTATTTGTGTAATCATTAGACGTGTTGTGTTTTTGTTAATTATGTCTTGATCATATTTGATTGTAAAGGTAAACTCACATATCAATGCATGTCATTTGTGGC

mRNA sequence

ATGTCATACGCCTACCTTTTCAAGTACATCATCATTGGTGATACTGGAGTTGGAAAATCATGTCTTCTTCTCCAGTTTACTGATAAGAGATTTCAGCCTGTTCATGACTTGACTATTGGTGTAGAGTTCGGTGCGAGGATGATCACCATCGACAGCAAGCCAATTAAGTTGCAAATTTGGGATACGGCTGGTCAAGAATCTTTCAGGTCTATTACAAGGTCCTACTATAGAGGGGCTGCTGGTGCCTTGCTTGTCTATGACATCACCAGGAGGGAGACTTTTAATCACCTGGCTAGCTGGCTTGAAGATGCAAGACAACATGCTAATGCAAACATGACAATAATGCTTATCGGTAACAAGTGTGATCTTGCACACAGAAGGGCTGTCAGCACTGAGGAAGGGGAGCAGTTTGCAAAGGAACATGGTCTAATTTTCATGGAGGCCTCTGCTAAAACTGCTCAAAATGTTGAGGAGGCATTCATACAAACTGCTGCAACCATATATAAGAAGATCCAGGATGGAGTATTTGATGTATCTAATGAGTCATATGGGATAAAAGTTGGATATGGTGGAATCCCAGGGCCATCAGGAGGCAGAGATGGTACTACAGCTCAATCTGGTGGTTGTTGCGGTTAAATCTTGCTGCTCAAAAACTAGTACAAATTGTCCACGTTCTCTTTAAATTCCTTTGTTAATTATGAGTGTCAGAAAACGCCCCCTCACCCTCATAAAAGGGCACCATAATAGGTTATCAGTTATCCATAAAGAAGTATTTGTGTAATCATTAGACGTGTTGTGTTTTTGTTAATTATGTCTTGATCATATTTGATTGTAAAGGTAAACTCACATATCAATGCATGTCATTTGTGGC

Coding sequence (CDS)

ATGTCATACGCCTACCTTTTCAAGTACATCATCATTGGTGATACTGGAGTTGGAAAATCATGTCTTCTTCTCCAGTTTACTGATAAGAGATTTCAGCCTGTTCATGACTTGACTATTGGTGTAGAGTTCGGTGCGAGGATGATCACCATCGACAGCAAGCCAATTAAGTTGCAAATTTGGGATACGGCTGGTCAAGAATCTTTCAGGTCTATTACAAGGTCCTACTATAGAGGGGCTGCTGGTGCCTTGCTTGTCTATGACATCACCAGGAGGGAGACTTTTAATCACCTGGCTAGCTGGCTTGAAGATGCAAGACAACATGCTAATGCAAACATGACAATAATGCTTATCGGTAACAAGTGTGATCTTGCACACAGAAGGGCTGTCAGCACTGAGGAAGGGGAGCAGTTTGCAAAGGAACATGGTCTAATTTTCATGGAGGCCTCTGCTAAAACTGCTCAAAATGTTGAGGAGGCATTCATACAAACTGCTGCAACCATATATAAGAAGATCCAGGATGGAGTATTTGATGTATCTAATGAGTCATATGGGATAAAAGTTGGATATGGTGGAATCCCAGGGCCATCAGGAGGCAGAGATGGTACTACAGCTCAATCTGGTGGTTGTTGCGGTTAA

Protein sequence

MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDSKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIQTAATIYKKIQDGVFDVSNESYGIKVGYGGIPGPSGGRDGTTAQSGGCCG
Homology
BLAST of Carg24380-RA vs. NCBI nr
Match: KAG7019338.1 (Ras-related protein RABB1c, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 426.0 bits (1094), Expect = 1.9e-115
Identity = 211/211 (100.00%), Postives = 211/211 (100.00%), Query Frame = 0

Query: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDSKPIKLQIW 60
           MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDSKPIKLQIW
Sbjct: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDSKPIKLQIW 60

Query: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120

Query: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIQTAATIYKKIQDGVFDVSN 180
           CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIQTAATIYKKIQDGVFDVSN
Sbjct: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIQTAATIYKKIQDGVFDVSN 180

Query: 181 ESYGIKVGYGGIPGPSGGRDGTTAQSGGCCG 212
           ESYGIKVGYGGIPGPSGGRDGTTAQSGGCCG
Sbjct: 181 ESYGIKVGYGGIPGPSGGRDGTTAQSGGCCG 211

BLAST of Carg24380-RA vs. NCBI nr
Match: XP_022927533.1 (ras-related protein RABB1c-like [Cucurbita moschata] >KAG6583677.1 Ras-related protein RABB1c, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 426.0 bits (1094), Expect = 1.9e-115
Identity = 211/211 (100.00%), Postives = 211/211 (100.00%), Query Frame = 0

Query: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDSKPIKLQIW 60
           MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDSKPIKLQIW
Sbjct: 41  MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDSKPIKLQIW 100

Query: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK
Sbjct: 101 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 160

Query: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIQTAATIYKKIQDGVFDVSN 180
           CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIQTAATIYKKIQDGVFDVSN
Sbjct: 161 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIQTAATIYKKIQDGVFDVSN 220

Query: 181 ESYGIKVGYGGIPGPSGGRDGTTAQSGGCCG 212
           ESYGIKVGYGGIPGPSGGRDGTTAQSGGCCG
Sbjct: 221 ESYGIKVGYGGIPGPSGGRDGTTAQSGGCCG 251

BLAST of Carg24380-RA vs. NCBI nr
Match: XP_023520190.1 (LOW QUALITY PROTEIN: ras-related protein RABB1c-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 423.7 bits (1088), Expect = 9.3e-115
Identity = 210/211 (99.53%), Postives = 210/211 (99.53%), Query Frame = 0

Query: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDSKPIKLQIW 60
           MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDSKPIKLQIW
Sbjct: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDSKPIKLQIW 60

Query: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120

Query: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIQTAATIYKKIQDGVFDVSN 180
           CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIQTAATIYKKIQDGVFDVSN
Sbjct: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIQTAATIYKKIQDGVFDVSN 180

Query: 181 ESYGIKVGYGGIPGPSGGRDGTTAQSGGCCG 212
           ESYGIKVGYGGIPGPSG RDGTTAQSGGCCG
Sbjct: 181 ESYGIKVGYGGIPGPSGSRDGTTAQSGGCCG 211

BLAST of Carg24380-RA vs. NCBI nr
Match: XP_038893942.1 (ras-related protein RABB1c isoform X2 [Benincasa hispida])

HSP 1 Score: 421.8 bits (1083), Expect = 3.5e-114
Identity = 208/210 (99.05%), Postives = 210/210 (100.00%), Query Frame = 0

Query: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDSKPIKLQIW 60
           MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITID+KPIKLQIW
Sbjct: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW 60

Query: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120

Query: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIQTAATIYKKIQDGVFDVSN 180
           CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFI+TAATIYKKIQDGVFDVSN
Sbjct: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSN 180

Query: 181 ESYGIKVGYGGIPGPSGGRDGTTAQSGGCC 211
           ESYGIKVGYGGIPGPSGGRDGTTAQSGGCC
Sbjct: 181 ESYGIKVGYGGIPGPSGGRDGTTAQSGGCC 210

BLAST of Carg24380-RA vs. NCBI nr
Match: XP_022973163.1 (ras-related protein RABB1c-like [Cucurbita maxima])

HSP 1 Score: 421.0 bits (1081), Expect = 6.0e-114
Identity = 209/211 (99.05%), Postives = 209/211 (99.05%), Query Frame = 0

Query: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDSKPIKLQIW 60
           MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITI SKPIKLQIW
Sbjct: 40  MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIHSKPIKLQIW 99

Query: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK
Sbjct: 100 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 159

Query: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIQTAATIYKKIQDGVFDVSN 180
           CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIQTAATIYKKIQDGVFDVSN
Sbjct: 160 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIQTAATIYKKIQDGVFDVSN 219

Query: 181 ESYGIKVGYGGIPGPSGGRDGTTAQSGGCCG 212
           ESYGIKVGYGGIPGPSG RDGTTAQSGGCCG
Sbjct: 220 ESYGIKVGYGGIPGPSGSRDGTTAQSGGCCG 250

BLAST of Carg24380-RA vs. ExPASy Swiss-Prot
Match: P92963 (Ras-related protein RABB1c OS=Arabidopsis thaliana OX=3702 GN=RABB1C PE=1 SV=1)

HSP 1 Score: 419.1 bits (1076), Expect = 3.0e-116
Identity = 206/211 (97.63%), Postives = 210/211 (99.53%), Query Frame = 0

Query: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDSKPIKLQIW 60
           MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITID+KPIKLQIW
Sbjct: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW 60

Query: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120

Query: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIQTAATIYKKIQDGVFDVSN 180
           CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFI+TAATIYKKIQDGVFDVSN
Sbjct: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSN 180

Query: 181 ESYGIKVGYGGIPGPSGGRDGTTAQSGGCCG 212
           ESYGIKVGYGGIPGPSGGRDG+T+Q GGCCG
Sbjct: 181 ESYGIKVGYGGIPGPSGGRDGSTSQGGGCCG 211

BLAST of Carg24380-RA vs. ExPASy Swiss-Prot
Match: P49104 (Ras-related protein Rab-2-B OS=Zea mays OX=4577 GN=RAB2B PE=2 SV=1)

HSP 1 Score: 389.0 bits (998), Expect = 3.3e-107
Identity = 192/210 (91.43%), Postives = 200/210 (95.24%), Query Frame = 0

Query: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDSKPIKLQIW 60
           MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITID+KPIKLQIW
Sbjct: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW 60

Query: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIML+GNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLVGNK 120

Query: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIQTAATIYKKIQDGVFDVSN 180
           CDL+HRRAVS EEGEQFAKEHGLIFMEASAKTAQNVEEAF++TA  IYKKIQDGVFDVSN
Sbjct: 121 CDLSHRRAVSYEEGEQFAKEHGLIFMEASAKTAQNVEEAFVKTAGAIYKKIQDGVFDVSN 180

Query: 181 ESYGIKVGYGGIPGPSGGRDGTTAQSGGCC 211
           ESYGIKVGY  IPG SGG   +++Q GGCC
Sbjct: 181 ESYGIKVGY-AIPGQSGGAGSSSSQGGGCC 209

BLAST of Carg24380-RA vs. ExPASy Swiss-Prot
Match: P49103 (Ras-related protein Rab-2-A OS=Zea mays OX=4577 GN=RAB2A PE=2 SV=2)

HSP 1 Score: 385.2 bits (988), Expect = 4.8e-106
Identity = 192/210 (91.43%), Postives = 201/210 (95.71%), Query Frame = 0

Query: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDSKPIKLQIW 60
           MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITID+KPIKLQIW
Sbjct: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW 60

Query: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIML+GNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLVGNK 120

Query: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIQTAATIYKKIQDGVFDVSN 180
           CDL+HRRAVS EEGEQFAKEHGLIFMEASAKTAQNVEEAF++TA  IYKKIQDGVFDVSN
Sbjct: 121 CDLSHRRAVSYEEGEQFAKEHGLIFMEASAKTAQNVEEAFVKTAGAIYKKIQDGVFDVSN 180

Query: 181 ESYGIKVGYGGIPGPSGGRDGTTAQSGGCC 211
           ESYGIKVGY  +PG SGG  G+++Q GGCC
Sbjct: 181 ESYGIKVGY-VVPGQSGGA-GSSSQGGGCC 208

BLAST of Carg24380-RA vs. ExPASy Swiss-Prot
Match: Q38922 (Ras-related protein RABB1b OS=Arabidopsis thaliana OX=3702 GN=RABB1B PE=2 SV=1)

HSP 1 Score: 377.9 bits (969), Expect = 7.7e-104
Identity = 183/211 (86.73%), Postives = 197/211 (93.36%), Query Frame = 0

Query: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDSKPIKLQIW 60
           MSY YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM+T+D +PIKLQIW
Sbjct: 1   MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTVDGRPIKLQIW 60

Query: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHAN NM+IMLIGNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMSIMLIGNK 120

Query: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIQTAATIYKKIQDGVFDVSN 180
           CDLAH+RAVS EEG+QFAKEHGL+F+EASA+TAQNVEEAFI+TAA I + IQDGVFDVSN
Sbjct: 121 CDLAHKRAVSKEEGQQFAKEHGLLFLEASARTAQNVEEAFIETAAKILQNIQDGVFDVSN 180

Query: 181 ESYGIKVGYGGIPGPSGGRDGTTAQSGGCCG 212
           ES GIK+GYG   G +GGRDGT +Q GGCCG
Sbjct: 181 ESSGIKIGYGRTQGAAGGRDGTISQGGGCCG 211

BLAST of Carg24380-RA vs. ExPASy Swiss-Prot
Match: P36863 (GTP-binding protein yptV4 OS=Volvox carteri OX=3067 GN=YPTV4 PE=3 SV=1)

HSP 1 Score: 364.8 bits (935), Expect = 6.7e-100
Identity = 184/213 (86.38%), Postives = 190/213 (89.20%), Query Frame = 0

Query: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDSKPIKLQIW 60
           MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMI ID K IKLQIW
Sbjct: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIDGKQIKLQIW 60

Query: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHAN NMTIMLIGNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMTIMLIGNK 120

Query: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIQTAATIYKKIQDGVFDVSN 180
           CDL HRRAV+TEEGEQFAKEHGLIF+E SA+TA NVEEAFI TA  IYKKIQDGVFDVSN
Sbjct: 121 CDLTHRRAVTTEEGEQFAKEHGLIFLETSARTAHNVEEAFINTAKEIYKKIQDGVFDVSN 180

Query: 181 ESYGIKVGYG-GIPGPSGGR--DGTTAQSGGCC 211
           ESYGIKVGYG G  GP   +  +G   +S  CC
Sbjct: 181 ESYGIKVGYGAGNAGPQAAKPGEGDARKSSSCC 213

BLAST of Carg24380-RA vs. ExPASy TrEMBL
Match: A0A6J1EL97 (ras-related protein RABB1c-like OS=Cucurbita moschata OX=3662 GN=LOC111434331 PE=4 SV=1)

HSP 1 Score: 426.0 bits (1094), Expect = 9.1e-116
Identity = 211/211 (100.00%), Postives = 211/211 (100.00%), Query Frame = 0

Query: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDSKPIKLQIW 60
           MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDSKPIKLQIW
Sbjct: 41  MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDSKPIKLQIW 100

Query: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK
Sbjct: 101 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 160

Query: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIQTAATIYKKIQDGVFDVSN 180
           CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIQTAATIYKKIQDGVFDVSN
Sbjct: 161 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIQTAATIYKKIQDGVFDVSN 220

Query: 181 ESYGIKVGYGGIPGPSGGRDGTTAQSGGCCG 212
           ESYGIKVGYGGIPGPSGGRDGTTAQSGGCCG
Sbjct: 221 ESYGIKVGYGGIPGPSGGRDGTTAQSGGCCG 251

BLAST of Carg24380-RA vs. ExPASy TrEMBL
Match: A0A6J1IC90 (ras-related protein RABB1c-like OS=Cucurbita maxima OX=3661 GN=LOC111471671 PE=4 SV=1)

HSP 1 Score: 421.0 bits (1081), Expect = 2.9e-114
Identity = 209/211 (99.05%), Postives = 209/211 (99.05%), Query Frame = 0

Query: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDSKPIKLQIW 60
           MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITI SKPIKLQIW
Sbjct: 40  MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIHSKPIKLQIW 99

Query: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK
Sbjct: 100 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 159

Query: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIQTAATIYKKIQDGVFDVSN 180
           CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIQTAATIYKKIQDGVFDVSN
Sbjct: 160 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIQTAATIYKKIQDGVFDVSN 219

Query: 181 ESYGIKVGYGGIPGPSGGRDGTTAQSGGCCG 212
           ESYGIKVGYGGIPGPSG RDGTTAQSGGCCG
Sbjct: 220 ESYGIKVGYGGIPGPSGSRDGTTAQSGGCCG 250

BLAST of Carg24380-RA vs. ExPASy TrEMBL
Match: A0A6J1CNK8 (ras-related protein RABB1c OS=Momordica charantia OX=3673 GN=LOC111012746 PE=4 SV=1)

HSP 1 Score: 420.2 bits (1079), Expect = 5.0e-114
Identity = 207/210 (98.57%), Postives = 210/210 (100.00%), Query Frame = 0

Query: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDSKPIKLQIW 60
           MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDSKPIKLQIW
Sbjct: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDSKPIKLQIW 60

Query: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120

Query: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIQTAATIYKKIQDGVFDVSN 180
           CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFI+TAATIYKKIQDGVFDVSN
Sbjct: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSN 180

Query: 181 ESYGIKVGYGGIPGPSGGRDGTTAQSGGCC 211
           ESYGIKVGYGGIPGPSGGRDGT+AQ+GGCC
Sbjct: 181 ESYGIKVGYGGIPGPSGGRDGTSAQAGGCC 210

BLAST of Carg24380-RA vs. ExPASy TrEMBL
Match: A0A218XLU8 (ras-related protein RABB1c OS=Punica granatum OX=22663 GN=LOC116208255 PE=4 SV=1)

HSP 1 Score: 419.9 bits (1078), Expect = 6.5e-114
Identity = 207/210 (98.57%), Postives = 209/210 (99.52%), Query Frame = 0

Query: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDSKPIKLQIW 60
           MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDSKPIKLQIW
Sbjct: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDSKPIKLQIW 60

Query: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120

Query: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIQTAATIYKKIQDGVFDVSN 180
           CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFI+TAATIYKKIQDGVFDVSN
Sbjct: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSN 180

Query: 181 ESYGIKVGYGGIPGPSGGRDGTTAQSGGCC 211
           ESYGIKVGYGGIPGPSGGRDG T+QSGGCC
Sbjct: 181 ESYGIKVGYGGIPGPSGGRDGATSQSGGCC 210

BLAST of Carg24380-RA vs. ExPASy TrEMBL
Match: A0A0A0LYF8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G172570 PE=4 SV=1)

HSP 1 Score: 419.9 bits (1078), Expect = 6.5e-114
Identity = 207/210 (98.57%), Postives = 209/210 (99.52%), Query Frame = 0

Query: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDSKPIKLQIW 60
           MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITID+KPIKLQIW
Sbjct: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW 60

Query: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120

Query: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIQTAATIYKKIQDGVFDVSN 180
           CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFI+TAATIYKKIQDGVFDVSN
Sbjct: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSN 180

Query: 181 ESYGIKVGYGGIPGPSGGRDGTTAQSGGCC 211
           ESYGIKVGYGGIPGPSGGRDG TAQSGGCC
Sbjct: 181 ESYGIKVGYGGIPGPSGGRDGATAQSGGCC 210

BLAST of Carg24380-RA vs. TAIR 10
Match: AT4G17170.1 (RAB GTPase homolog B1C )

HSP 1 Score: 419.1 bits (1076), Expect = 2.1e-117
Identity = 206/211 (97.63%), Postives = 210/211 (99.53%), Query Frame = 0

Query: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDSKPIKLQIW 60
           MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITID+KPIKLQIW
Sbjct: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW 60

Query: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120

Query: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIQTAATIYKKIQDGVFDVSN 180
           CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFI+TAATIYKKIQDGVFDVSN
Sbjct: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSN 180

Query: 181 ESYGIKVGYGGIPGPSGGRDGTTAQSGGCCG 212
           ESYGIKVGYGGIPGPSGGRDG+T+Q GGCCG
Sbjct: 181 ESYGIKVGYGGIPGPSGGRDGSTSQGGGCCG 211

BLAST of Carg24380-RA vs. TAIR 10
Match: AT4G35860.1 (GTP-binding 2 )

HSP 1 Score: 377.9 bits (969), Expect = 5.4e-105
Identity = 183/211 (86.73%), Postives = 197/211 (93.36%), Query Frame = 0

Query: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDSKPIKLQIW 60
           MSY YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM+T+D +PIKLQIW
Sbjct: 1   MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTVDGRPIKLQIW 60

Query: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHAN NM+IMLIGNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMSIMLIGNK 120

Query: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIQTAATIYKKIQDGVFDVSN 180
           CDLAH+RAVS EEG+QFAKEHGL+F+EASA+TAQNVEEAFI+TAA I + IQDGVFDVSN
Sbjct: 121 CDLAHKRAVSKEEGQQFAKEHGLLFLEASARTAQNVEEAFIETAAKILQNIQDGVFDVSN 180

Query: 181 ESYGIKVGYGGIPGPSGGRDGTTAQSGGCCG 212
           ES GIK+GYG   G +GGRDGT +Q GGCCG
Sbjct: 181 ESSGIKIGYGRTQGAAGGRDGTISQGGGCCG 211

BLAST of Carg24380-RA vs. TAIR 10
Match: AT4G17160.1 (RAB GTPase homolog B1A )

HSP 1 Score: 334.3 bits (856), Expect = 6.9e-92
Identity = 168/212 (79.25%), Postives = 184/212 (86.79%), Query Frame = 0

Query: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDSKPIKLQIW 60
           MSYAY FKYIIIGDTGVGKSCLLL+FTDKRFQ VHDLTIGVEFGA+ ITID+KPIKLQIW
Sbjct: 1   MSYAYRFKYIIIGDTGVGKSCLLLKFTDKRFQAVHDLTIGVEFGAKTITIDNKPIKLQIW 60

Query: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120
           DTAGQESFRS+TRSYYRG AG LLVYDITRRETFNHLASWLE+ARQHA+ NMT MLIGNK
Sbjct: 61  DTAGQESFRSVTRSYYRGRAGTLLVYDITRRETFNHLASWLEEARQHASENMTTMLIGNK 120

Query: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIQTAATIYKKIQDGVFDVSN 180
           CDL  +R VSTEEGEQFA+EHGLIFMEASAKTA NVEEAF++TAATIYK+IQDGV D +N
Sbjct: 121 CDLEDKRTVSTEEGEQFAREHGLIFMEASAKTAHNVEEAFVETAATIYKRIQDGVVDEAN 180

Query: 181 ESYGIKVGYGGIPGPSGGRDGTTAQS-GGCCG 212
           E        G  PGP GG+D +++Q   GCCG
Sbjct: 181 EP-------GITPGPFGGKDASSSQQRRGCCG 205

BLAST of Carg24380-RA vs. TAIR 10
Match: AT4G35860.2 (GTP-binding 2 )

HSP 1 Score: 284.6 bits (727), Expect = 6.3e-77
Identity = 138/165 (83.64%), Postives = 152/165 (92.12%), Query Frame = 0

Query: 47  MITIDSKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQ 106
           M+T+D +PIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQ
Sbjct: 1   MVTVDGRPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQ 60

Query: 107 HANANMTIMLIGNKCDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIQTAAT 166
           HAN NM+IMLIGNKCDLAH+RAVS EEG+QFAKEHGL+F+EASA+TAQNVEEAFI+TAA 
Sbjct: 61  HANPNMSIMLIGNKCDLAHKRAVSKEEGQQFAKEHGLLFLEASARTAQNVEEAFIETAAK 120

Query: 167 IYKKIQDGVFDVSNESYGIKVGYGGIPGPSGGRDGTTAQSGGCCG 212
           I + IQDGVFDVSNES GIK+GYG   G +GGRDGT +Q GGCCG
Sbjct: 121 ILQNIQDGVFDVSNESSGIKIGYGRTQGAAGGRDGTISQGGGCCG 165

BLAST of Carg24380-RA vs. TAIR 10
Match: AT4G18430.1 (RAB GTPase homolog A1E )

HSP 1 Score: 194.9 bits (494), Expect = 6.5e-50
Identity = 102/209 (48.80%), Postives = 130/209 (62.20%), Query Frame = 0

Query: 3   YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDSKPIKLQIWDT 62
           Y YLFK ++IGD+GVGKS LL +FT   F      TIGVEF  R + +D K IK Q+WDT
Sbjct: 10  YDYLFKLVLIGDSGVGKSNLLSRFTRNEFSIESKSTIGVEFATRSVHVDEKIIKAQLWDT 69

Query: 63  AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCD 122
           AGQE +R+IT +YYRGA GALLVYDITR  TF ++  WL++ R H +AN+ IML+GNK D
Sbjct: 70  AGQERYRAITSAYYRGAVGALLVYDITRHITFENVERWLKELRDHTDANVVIMLVGNKAD 129

Query: 123 LAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIQTAATIYKKIQDGVFDVSNES 182
           L H RAV TEE   F++   + FME SA  A NVE+AF      IY+ +     D + + 
Sbjct: 130 LRHLRAVPTEEARSFSERENMFFMETSALDATNVEQAFTHVLTQIYRVMSRKALDGTGDP 189

Query: 183 YGIKVGYGGIPGPSGGRDGTTA-QSGGCC 211
             +  G        G +D  TA +S GCC
Sbjct: 190 MSLPKGQ---TIDIGNKDDVTAVKSSGCC 215

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAG7019338.11.9e-115100.00Ras-related protein RABB1c, partial [Cucurbita argyrosperma subsp. argyrosperma][more]
XP_022927533.11.9e-115100.00ras-related protein RABB1c-like [Cucurbita moschata] >KAG6583677.1 Ras-related p... [more]
XP_023520190.19.3e-11599.53LOW QUALITY PROTEIN: ras-related protein RABB1c-like [Cucurbita pepo subsp. pepo... [more]
XP_038893942.13.5e-11499.05ras-related protein RABB1c isoform X2 [Benincasa hispida][more]
XP_022973163.16.0e-11499.05ras-related protein RABB1c-like [Cucurbita maxima][more]
Match NameE-valueIdentityDescription
P929633.0e-11697.63Ras-related protein RABB1c OS=Arabidopsis thaliana OX=3702 GN=RABB1C PE=1 SV=1[more]
P491043.3e-10791.43Ras-related protein Rab-2-B OS=Zea mays OX=4577 GN=RAB2B PE=2 SV=1[more]
P491034.8e-10691.43Ras-related protein Rab-2-A OS=Zea mays OX=4577 GN=RAB2A PE=2 SV=2[more]
Q389227.7e-10486.73Ras-related protein RABB1b OS=Arabidopsis thaliana OX=3702 GN=RABB1B PE=2 SV=1[more]
P368636.7e-10086.38GTP-binding protein yptV4 OS=Volvox carteri OX=3067 GN=YPTV4 PE=3 SV=1[more]
Match NameE-valueIdentityDescription
A0A6J1EL979.1e-116100.00ras-related protein RABB1c-like OS=Cucurbita moschata OX=3662 GN=LOC111434331 PE... [more]
A0A6J1IC902.9e-11499.05ras-related protein RABB1c-like OS=Cucurbita maxima OX=3661 GN=LOC111471671 PE=4... [more]
A0A6J1CNK85.0e-11498.57ras-related protein RABB1c OS=Momordica charantia OX=3673 GN=LOC111012746 PE=4 S... [more]
A0A218XLU86.5e-11498.57ras-related protein RABB1c OS=Punica granatum OX=22663 GN=LOC116208255 PE=4 SV=1[more]
A0A0A0LYF86.5e-11498.57Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G172570 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT4G17170.12.1e-11797.63RAB GTPase homolog B1C [more]
AT4G35860.15.4e-10586.73GTP-binding 2 [more]
AT4G17160.16.9e-9279.25RAB GTPase homolog B1A [more]
AT4G35860.26.3e-7783.64GTP-binding 2 [more]
AT4G18430.16.5e-5048.80RAB GTPase homolog A1E [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00449RASTRNSFRMNGcoord: 48..70
score: 53.4
coord: 7..28
score: 51.86
coord: 110..123
score: 49.81
coord: 145..167
score: 43.88
coord: 30..46
score: 32.76
NoneNo IPR availableSMARTSM00175rab_sub_5coord: 7..170
e-value: 7.1E-106
score: 367.7
NoneNo IPR availableSMARTSM00173ras_sub_4coord: 4..170
e-value: 7.3E-38
score: 141.8
NoneNo IPR availableSMARTSM00176ran_sub_2coord: 12..211
e-value: 3.7E-5
score: 24.1
NoneNo IPR availablePANTHERPTHR47979:SF64SUBFAMILY NOT NAMEDcoord: 1..211
NoneNo IPR availablePANTHERPTHR47979DRAB11-RELATEDcoord: 1..211
NoneNo IPR availablePROSITEPS51420RHOcoord: 1..168
score: 9.708656
NoneNo IPR availablePROSITEPS51419RABcoord: 2..210
score: 35.975567
NoneNo IPR availableCDDcd01866Rab2coord: 3..170
e-value: 2.06778E-131
score: 364.437
IPR001806Small GTPaseSMARTSM00174rho_sub_3coord: 9..170
e-value: 7.3E-12
score: 32.2
IPR001806Small GTPasePFAMPF00071Rascoord: 8..168
e-value: 8.1E-63
score: 210.8
IPR001806Small GTPasePROSITEPS51421RAScoord: 1..211
score: 19.470856
IPR005225Small GTP-binding protein domainTIGRFAMTIGR00231TIGR00231coord: 7..160
e-value: 7.5E-33
score: 111.6
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 1..182
e-value: 2.3E-71
score: 241.3
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 2..179

Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Carg24380Carg24380gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Carg24380-RA:7Carg24380-RA:7exon
Carg24380-RA:6Carg24380-RA:6exon
Carg24380-RA:5Carg24380-RA:5exon
Carg24380-RA:4Carg24380-RA:4exon
Carg24380-RA:3Carg24380-RA:3exon
Carg24380-RA:2Carg24380-RA:2exon
Carg24380-RA:1Carg24380-RA:1exon


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Carg24380-RA:three_prime_utrCarg24380-RA:three_prime_utr_2three_prime_UTR
Carg24380-RA:three_prime_utrCarg24380-RA:three_prime_utrthree_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Carg24380-RA:cdsCarg24380-RA:cds_6CDS
Carg24380-RA:cdsCarg24380-RA:cds_5CDS
Carg24380-RA:cdsCarg24380-RA:cds_4CDS
Carg24380-RA:cdsCarg24380-RA:cds_3CDS
Carg24380-RA:cdsCarg24380-RA:cds_2CDS
Carg24380-RA:cdsCarg24380-RA:cdsCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Carg24380-RACarg24380-RA-proteinpolypeptide


GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport
biological_process GO:0015031 protein transport
cellular_component GO:0005794 Golgi apparatus
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005886 plasma membrane
molecular_function GO:0003924 GTPase activity
molecular_function GO:0005525 GTP binding