Carg24380 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg24380
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Ras-related protein Rab-2A
Location	Carg_Chr13: 4444220 .. 4447892 (-)
RNA-Seq Expression	Carg24380
Synteny	Carg24380

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCATACGCCTACCTTTTCAAGTACATCATCATTGGTGATACTGGTACGTGTTGGTATTGATGCTTTTGTCGTTTTCGATCTGATTCCTCAATTGTGTCGCTTTGGTTATGGGTTGGTTTGTGCTTAATCTGTTTCTCTAATTTGATGATGTCAACGCTGCTCTGCTTGGTTTCCCTTTTGATTTGGGACTTGCTGTGTTTAGCTTTGTATTGGATGTTGTTTTCTGTTCGTCGATTGATTGTGAGGTTTGAAACTTAATTGTGCTGTGTTCTCCAGGAGTTGGAAAATCATGTCTTCTTCTCCAGTTTACTGATAAGAGATTTCAGCCTGTTCATGACTTGACTATTGGTGTAGAGTTCGGTGCGAGGATGATCACCATCGACAGCAAGCCAATTAAGTTGCAAATTTGGGATACGGTTAGTTATCTCTCTTTCTTTCTTTCCTTCTTTTTCTGGGAGTTTCTTGTTTCAAATCTTTAGATATTTAACTGTGCCACTTGTCTACTGAATTGAATGAGCTCTGTTCTGGTTTATGGATAGTATTTTACCTTTTCTTGGATCCATTTCAAGGAAAAGAATCTGCAATTATACCAGAGAATAGCGGGTGATCTGCTGCTATAAGCTTAATCTTAGTTCGAGTAAAAGGCGAAAACAATAACTAATAGAACTGGGAAGCTTCCATTCATGCTAAGCTTCCATTCATGCTTACTATGTATAGTCTATACTATTTAGTTTATCATTGTAACATGGCTTTGAATCTGAAAAGTTATCTATAAGTTATGCAACACTTATATATGCTCTTAGCTCAAGTGCTCTGCTTAAACTTAGAGAACATACACATAACATAGTACACTTATTCTATTGCTTAATGATAGTTATTCACTATCTGCTTTGTGTGTAATATGATGATCACTATTGAATCAACGTCATGTATTGTTCATTTCTATTATACATATATACCATAAGATTGGTACAGATGTTCGTTCCTTGTACTCTTTCGATTTAGATTTGTCCTTTTGTTTCTTATTAATTTCATCGAGTTTTTCTGAGTCTGAAGTTTCCCAAAAAAATTGCAGGCTGGTCAAGAATCTTTCAGGTCTATTACAAGGTCCTACTATAGAGGGGCTGCTGGTGCCTTGCTTGTCTATGACATCACCAGGTCTTTTTACCTCTTGGTTCCATTCTAACTTAATACTACTTTTGAGTTTTGATGTAGGGATGTTTCTGTACTTCTGTTATTTGTGTTTGATGTCTTATGCAGCCGTTGGGTAAGACCGTTAGTGTGTTTAACCAAGCTGGTTAAGGTCATTACGTTTAGCAGTTGGAACTAGTCAGTTGGTTCGCTTCAGTTAGCTCTTTATAGTATAAATATTCATTGTTTTGGTTGTATGAAATTCATTCCCCTCAGCTACACCAATTTTCTAGTGAATAAGTAAGGGAGGCTTTTGAAATTCATCCCCCAAATGGGTCAGTATGCGGAACCACTGTTTGAAAGATATTTTAGAAACTTGGAGAGGATACTCCTATTCCTTTTGCAATTCATTATTGTTCTTTTCCTGGGGACCTAATATTCAATCAATTAAACCAGTCATATTGAAGTTGAATTATAATTCATGTTGGGAGTGAGAATTTGTAAAACCCATGATAGACAGCAAGTCACCCAAAAGTATAGTCGTGTAGAAAAAGGGAAAAAGGGAGACTGAGTGATATAAGTACGTGAGGATTGGCAGGCGTGTGCGTTATGATTATGTGGCCATATATTATGGTTAGTTATACTTTTTGTGTATGTTGAAGGCTGCTTATGGCAAAGAGGAGGCTATCTTTTTGCATTTTGCTCAATTGTAGCTCCTTCGGGCATAGTGGAGAGGAGGGGAGCTCTTGAAACTCCCTTGGCATTGCCAAAACAGTTAATAGATAATTTGAGGCCTATCGATCCCTGAGTCACCAGGAAAGCTCACACTTCATGAAAGTAAACAAGACTTGGCCAGAAAGGTTATTGGTTAGTGGGACTGACCATTGTGTTAGAAGGTTGTAGATGTAATCTAAAAGAATTTTGGGTGGACAGCATAAAGTTTAAATGTGAATGCTCGAATTTTCTTGGATTAGTTGTGGTTTATTTTTGTCTTGCATAGTTGTAGGTTTTGTGAGAAGGAAATAACTTGAGCAAGACCGTAGTTGTTAAAATAATGCGGTCAGCCAGGTCTGACAGCAGCCAGCTCTAAACTGTTCCAACTTCATGATGTTTGTCGTGATTCAGCCTTCTAGTTTAACTTGATTGACTGCATAAGCTGAAATGGGGCCTCATCATCATGCCCCTAAATTTCCTGAGTCAATGAGGACATCGAACTTAAGGTTACGTGGCTATCATATTTTTCAGGAGGGAGACTTTTAATCACCTGGCTAGCTGGCTTGAAGATGCAAGACAACATGCTAATGCAAACATGACAATAATGCTTATCGGTAACAAGTGTGATCTTGCACACAGAAGGGCTGTCAGCACTGAGGAAGGGGAGCAGTTTGCAAAGGAACATGGTCTAATTTTCATGGAGGCCTCTGCTAAAACTGCTCAAAATGTTGAGGAGGTGATAGAATAGTCATAAATTGCCTTCCAGAAAGTTCAAAATTAGACACTGTTCATCTCTAAGCTAAGAACATGACATAAAGATATAATATTCATCTTTTTTATATATTGTAAACAGTTCTCCGTCTCACAATCTTCGTGATGATCAACAATTTTTACAGGCATTCATACAAACTGCTGCAACCATATATAAGAAGATCCAGGATGGAGTATTTGATGTATCTAATGAGGTATGAAGCTTGCTTTTTAACTTGCTGCTAAATGTGTACGGAAATGTTTTAGTTTTACCATGGCATTTTCTCTTGCGTCACGGTGATCAAAGTGCATCTGATTAGATTGGGGGTCTTGAATTTACTTTTGACTGTGCTACTTCAAGTGGTGTTTCACCGTTAGTCAAAAGTTATTTAGCTGCTTGAATTGAACAATGTTTGGCCAGTGGCATTTAGCGACTGCTATAAGTGACAGAATTTAGATTCGAGTCTCTAGTCTCTTAGAATTTTGTTGTTACAACGGATGAATAGCGATGAGAATGAATGATGTAAGTGATGCTATGTTCCATCTTATGTGCAGTCATATGGGATAAAAGTTGGATATGGTGGAATCCCAGGGCCATCAGGAGGCAGAGATGGTACTACAGCTCAATCTGGTGGTTGTTGCGGTTAAATCTTGCTGCTCAAAAACTAGTACAAATTGTCCACGTTCTCTTTAAATTCCTTTGTTAATTATGAGTGTCAGAAAACGCCCCCTCACCCTCATAAAAGGGCACCATAATAGGTTATCAGGTGTTTATCTAATGGCCCCAAGGGGTGGCTCCGTTGGCAGGGGCTTGGGGTCTGTTGTTATACCAGCTTAATGATCCAAAACTCAAGCCTTCGGGTGAGCTTAATACCAAAAACCCTTGATGTCGCCCGGATTCTGGCCTTGGGCGGGCATCGGTGCCCTTGGGTATAGAGGAACGAAGTTCTAACTCCCAGTTATCCATAAAGAAGTATTTGTGTAATCATTAGACGTGTTGTGTTTTTGTTAATTATGTCTTGATCATATTTGATTGTAAAGGTAAACTCACATATCAATGCATGTCATTTGTGGC

mRNA sequence

ATGTCATACGCCTACCTTTTCAAGTACATCATCATTGGTGATACTGGAGTTGGAAAATCATGTCTTCTTCTCCAGTTTACTGATAAGAGATTTCAGCCTGTTCATGACTTGACTATTGGTGTAGAGTTCGGTGCGAGGATGATCACCATCGACAGCAAGCCAATTAAGTTGCAAATTTGGGATACGGCTGGTCAAGAATCTTTCAGGTCTATTACAAGGTCCTACTATAGAGGGGCTGCTGGTGCCTTGCTTGTCTATGACATCACCAGGAGGGAGACTTTTAATCACCTGGCTAGCTGGCTTGAAGATGCAAGACAACATGCTAATGCAAACATGACAATAATGCTTATCGGTAACAAGTGTGATCTTGCACACAGAAGGGCTGTCAGCACTGAGGAAGGGGAGCAGTTTGCAAAGGAACATGGTCTAATTTTCATGGAGGCCTCTGCTAAAACTGCTCAAAATGTTGAGGAGGCATTCATACAAACTGCTGCAACCATATATAAGAAGATCCAGGATGGAGTATTTGATGTATCTAATGAGTCATATGGGATAAAAGTTGGATATGGTGGAATCCCAGGGCCATCAGGAGGCAGAGATGGTACTACAGCTCAATCTGGTGGTTGTTGCGGTTAAATCTTGCTGCTCAAAAACTAGTACAAATTGTCCACGTTCTCTTTAAATTCCTTTGTTAATTATGAGTGTCAGAAAACGCCCCCTCACCCTCATAAAAGGGCACCATAATAGGTTATCAGTTATCCATAAAGAAGTATTTGTGTAATCATTAGACGTGTTGTGTTTTTGTTAATTATGTCTTGATCATATTTGATTGTAAAGGTAAACTCACATATCAATGCATGTCATTTGTGGC

Coding sequence (CDS)

ATGTCATACGCCTACCTTTTCAAGTACATCATCATTGGTGATACTGGAGTTGGAAAATCATGTCTTCTTCTCCAGTTTACTGATAAGAGATTTCAGCCTGTTCATGACTTGACTATTGGTGTAGAGTTCGGTGCGAGGATGATCACCATCGACAGCAAGCCAATTAAGTTGCAAATTTGGGATACGGCTGGTCAAGAATCTTTCAGGTCTATTACAAGGTCCTACTATAGAGGGGCTGCTGGTGCCTTGCTTGTCTATGACATCACCAGGAGGGAGACTTTTAATCACCTGGCTAGCTGGCTTGAAGATGCAAGACAACATGCTAATGCAAACATGACAATAATGCTTATCGGTAACAAGTGTGATCTTGCACACAGAAGGGCTGTCAGCACTGAGGAAGGGGAGCAGTTTGCAAAGGAACATGGTCTAATTTTCATGGAGGCCTCTGCTAAAACTGCTCAAAATGTTGAGGAGGCATTCATACAAACTGCTGCAACCATATATAAGAAGATCCAGGATGGAGTATTTGATGTATCTAATGAGTCATATGGGATAAAAGTTGGATATGGTGGAATCCCAGGGCCATCAGGAGGCAGAGATGGTACTACAGCTCAATCTGGTGGTTGTTGCGGTTAA

Protein sequence

MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDSKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIQTAATIYKKIQDGVFDVSNESYGIKVGYGGIPGPSGGRDGTTAQSGGCCG

Homology

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BLAST of Carg24380 vs. NCBI nr
Match: KAG7019338.1 (Ras-related protein RABB1c, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 426.0 bits (1094), Expect = 1.9e-115
Identity = 211/211 (100.00%), Postives = 211/211 (100.00%), Query Frame = 0


Query: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDSKPIKLQIW 60
           MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDSKPIKLQIW
Sbjct: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDSKPIKLQIW 60

Query: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120

Query: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIQTAATIYKKIQDGVFDVSN 180
           CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIQTAATIYKKIQDGVFDVSN
Sbjct: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIQTAATIYKKIQDGVFDVSN 180

Query: 181 ESYGIKVGYGGIPGPSGGRDGTTAQSGGCCG 212
           ESYGIKVGYGGIPGPSGGRDGTTAQSGGCCG
Sbjct: 181 ESYGIKVGYGGIPGPSGGRDGTTAQSGGCCG 211

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BLAST of Carg24380 vs. NCBI nr
Match: XP_022927533.1 (ras-related protein RABB1c-like [Cucurbita moschata] >KAG6583677.1 Ras-related protein RABB1c, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 426.0 bits (1094), Expect = 1.9e-115
Identity = 211/211 (100.00%), Postives = 211/211 (100.00%), Query Frame = 0


Query: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDSKPIKLQIW 60
           MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDSKPIKLQIW
Sbjct: 41  MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDSKPIKLQIW 100

Query: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK
Sbjct: 101 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 160

Query: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIQTAATIYKKIQDGVFDVSN 180
           CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIQTAATIYKKIQDGVFDVSN
Sbjct: 161 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIQTAATIYKKIQDGVFDVSN 220

Query: 181 ESYGIKVGYGGIPGPSGGRDGTTAQSGGCCG 212
           ESYGIKVGYGGIPGPSGGRDGTTAQSGGCCG
Sbjct: 221 ESYGIKVGYGGIPGPSGGRDGTTAQSGGCCG 251

[Close]

BLAST of Carg24380 vs. NCBI nr
Match: XP_023520190.1 (LOW QUALITY PROTEIN: ras-related protein RABB1c-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 423.7 bits (1088), Expect = 9.3e-115
Identity = 210/211 (99.53%), Postives = 210/211 (99.53%), Query Frame = 0


Query: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDSKPIKLQIW 60
           MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDSKPIKLQIW
Sbjct: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDSKPIKLQIW 60

Query: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120

Query: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIQTAATIYKKIQDGVFDVSN 180
           CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIQTAATIYKKIQDGVFDVSN
Sbjct: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIQTAATIYKKIQDGVFDVSN 180

Query: 181 ESYGIKVGYGGIPGPSGGRDGTTAQSGGCCG 212
           ESYGIKVGYGGIPGPSG RDGTTAQSGGCCG
Sbjct: 181 ESYGIKVGYGGIPGPSGSRDGTTAQSGGCCG 211

[Close]

BLAST of Carg24380 vs. NCBI nr
Match: XP_038893942.1 (ras-related protein RABB1c isoform X2 [Benincasa hispida])

HSP 1 Score: 421.8 bits (1083), Expect = 3.5e-114
Identity = 208/210 (99.05%), Postives = 210/210 (100.00%), Query Frame = 0


Query: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDSKPIKLQIW 60
           MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITID+KPIKLQIW
Sbjct: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW 60

Query: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120

Query: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIQTAATIYKKIQDGVFDVSN 180
           CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFI+TAATIYKKIQDGVFDVSN
Sbjct: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSN 180

Query: 181 ESYGIKVGYGGIPGPSGGRDGTTAQSGGCC 211
           ESYGIKVGYGGIPGPSGGRDGTTAQSGGCC
Sbjct: 181 ESYGIKVGYGGIPGPSGGRDGTTAQSGGCC 210

[Close]

BLAST of Carg24380 vs. NCBI nr
Match: XP_022973163.1 (ras-related protein RABB1c-like [Cucurbita maxima])

HSP 1 Score: 421.0 bits (1081), Expect = 6.0e-114
Identity = 209/211 (99.05%), Postives = 209/211 (99.05%), Query Frame = 0


Query: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDSKPIKLQIW 60
           MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITI SKPIKLQIW
Sbjct: 40  MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIHSKPIKLQIW 99

Query: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK
Sbjct: 100 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 159

Query: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIQTAATIYKKIQDGVFDVSN 180
           CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIQTAATIYKKIQDGVFDVSN
Sbjct: 160 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIQTAATIYKKIQDGVFDVSN 219

Query: 181 ESYGIKVGYGGIPGPSGGRDGTTAQSGGCCG 212
           ESYGIKVGYGGIPGPSG RDGTTAQSGGCCG
Sbjct: 220 ESYGIKVGYGGIPGPSGSRDGTTAQSGGCCG 250

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BLAST of Carg24380 vs. ExPASy Swiss-Prot
Match: P92963 (Ras-related protein RABB1c OS=Arabidopsis thaliana OX=3702 GN=RABB1C PE=1 SV=1)

HSP 1 Score: 419.1 bits (1076), Expect = 3.0e-116
Identity = 206/211 (97.63%), Postives = 210/211 (99.53%), Query Frame = 0


Query: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDSKPIKLQIW 60
           MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITID+KPIKLQIW
Sbjct: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW 60

Query: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120

Query: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIQTAATIYKKIQDGVFDVSN 180
           CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFI+TAATIYKKIQDGVFDVSN
Sbjct: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSN 180

Query: 181 ESYGIKVGYGGIPGPSGGRDGTTAQSGGCCG 212
           ESYGIKVGYGGIPGPSGGRDG+T+Q GGCCG
Sbjct: 181 ESYGIKVGYGGIPGPSGGRDGSTSQGGGCCG 211

[Close]

BLAST of Carg24380 vs. ExPASy Swiss-Prot
Match: P49104 (Ras-related protein Rab-2-B OS=Zea mays OX=4577 GN=RAB2B PE=2 SV=1)

HSP 1 Score: 389.0 bits (998), Expect = 3.3e-107
Identity = 192/210 (91.43%), Postives = 200/210 (95.24%), Query Frame = 0


Query: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDSKPIKLQIW 60
           MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITID+KPIKLQIW
Sbjct: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW 60

Query: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIML+GNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLVGNK 120

Query: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIQTAATIYKKIQDGVFDVSN 180
           CDL+HRRAVS EEGEQFAKEHGLIFMEASAKTAQNVEEAF++TA  IYKKIQDGVFDVSN
Sbjct: 121 CDLSHRRAVSYEEGEQFAKEHGLIFMEASAKTAQNVEEAFVKTAGAIYKKIQDGVFDVSN 180

Query: 181 ESYGIKVGYGGIPGPSGGRDGTTAQSGGCC 211
           ESYGIKVGY  IPG SGG   +++Q GGCC
Sbjct: 181 ESYGIKVGY-AIPGQSGGAGSSSSQGGGCC 209

[Close]

BLAST of Carg24380 vs. ExPASy Swiss-Prot
Match: P49103 (Ras-related protein Rab-2-A OS=Zea mays OX=4577 GN=RAB2A PE=2 SV=2)

HSP 1 Score: 385.2 bits (988), Expect = 4.8e-106
Identity = 192/210 (91.43%), Postives = 201/210 (95.71%), Query Frame = 0


Query: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDSKPIKLQIW 60
           MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITID+KPIKLQIW
Sbjct: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW 60

Query: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIML+GNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLVGNK 120

Query: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIQTAATIYKKIQDGVFDVSN 180
           CDL+HRRAVS EEGEQFAKEHGLIFMEASAKTAQNVEEAF++TA  IYKKIQDGVFDVSN
Sbjct: 121 CDLSHRRAVSYEEGEQFAKEHGLIFMEASAKTAQNVEEAFVKTAGAIYKKIQDGVFDVSN 180

Query: 181 ESYGIKVGYGGIPGPSGGRDGTTAQSGGCC 211
           ESYGIKVGY  +PG SGG  G+++Q GGCC
Sbjct: 181 ESYGIKVGY-VVPGQSGGA-GSSSQGGGCC 208

[Close]

BLAST of Carg24380 vs. ExPASy Swiss-Prot
Match: Q38922 (Ras-related protein RABB1b OS=Arabidopsis thaliana OX=3702 GN=RABB1B PE=2 SV=1)

HSP 1 Score: 377.9 bits (969), Expect = 7.7e-104
Identity = 183/211 (86.73%), Postives = 197/211 (93.36%), Query Frame = 0


Query: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDSKPIKLQIW 60
           MSY YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM+T+D +PIKLQIW
Sbjct: 1   MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTVDGRPIKLQIW 60

Query: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHAN NM+IMLIGNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMSIMLIGNK 120

Query: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIQTAATIYKKIQDGVFDVSN 180
           CDLAH+RAVS EEG+QFAKEHGL+F+EASA+TAQNVEEAFI+TAA I + IQDGVFDVSN
Sbjct: 121 CDLAHKRAVSKEEGQQFAKEHGLLFLEASARTAQNVEEAFIETAAKILQNIQDGVFDVSN 180

Query: 181 ESYGIKVGYGGIPGPSGGRDGTTAQSGGCCG 212
           ES GIK+GYG   G +GGRDGT +Q GGCCG
Sbjct: 181 ESSGIKIGYGRTQGAAGGRDGTISQGGGCCG 211

[Close]

BLAST of Carg24380 vs. ExPASy Swiss-Prot
Match: P36863 (GTP-binding protein yptV4 OS=Volvox carteri OX=3067 GN=YPTV4 PE=3 SV=1)

HSP 1 Score: 364.8 bits (935), Expect = 6.7e-100
Identity = 184/213 (86.38%), Postives = 190/213 (89.20%), Query Frame = 0


Query: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDSKPIKLQIW 60
           MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMI ID K IKLQIW
Sbjct: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIDGKQIKLQIW 60

Query: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHAN NMTIMLIGNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMTIMLIGNK 120

Query: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIQTAATIYKKIQDGVFDVSN 180
           CDL HRRAV+TEEGEQFAKEHGLIF+E SA+TA NVEEAFI TA  IYKKIQDGVFDVSN
Sbjct: 121 CDLTHRRAVTTEEGEQFAKEHGLIFLETSARTAHNVEEAFINTAKEIYKKIQDGVFDVSN 180

Query: 181 ESYGIKVGYG-GIPGPSGGR--DGTTAQSGGCC 211
           ESYGIKVGYG G  GP   +  +G   +S  CC
Sbjct: 181 ESYGIKVGYGAGNAGPQAAKPGEGDARKSSSCC 213

[Close]

BLAST of Carg24380 vs. ExPASy TrEMBL
Match: A0A6J1EL97 (ras-related protein RABB1c-like OS=Cucurbita moschata OX=3662 GN=LOC111434331 PE=4 SV=1)

HSP 1 Score: 426.0 bits (1094), Expect = 9.1e-116
Identity = 211/211 (100.00%), Postives = 211/211 (100.00%), Query Frame = 0


Query: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDSKPIKLQIW 60
           MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDSKPIKLQIW
Sbjct: 41  MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDSKPIKLQIW 100

Query: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK
Sbjct: 101 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 160

Query: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIQTAATIYKKIQDGVFDVSN 180
           CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIQTAATIYKKIQDGVFDVSN
Sbjct: 161 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIQTAATIYKKIQDGVFDVSN 220

Query: 181 ESYGIKVGYGGIPGPSGGRDGTTAQSGGCCG 212
           ESYGIKVGYGGIPGPSGGRDGTTAQSGGCCG
Sbjct: 221 ESYGIKVGYGGIPGPSGGRDGTTAQSGGCCG 251

[Close]

BLAST of Carg24380 vs. ExPASy TrEMBL
Match: A0A6J1IC90 (ras-related protein RABB1c-like OS=Cucurbita maxima OX=3661 GN=LOC111471671 PE=4 SV=1)

HSP 1 Score: 421.0 bits (1081), Expect = 2.9e-114
Identity = 209/211 (99.05%), Postives = 209/211 (99.05%), Query Frame = 0


Query: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDSKPIKLQIW 60
           MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITI SKPIKLQIW
Sbjct: 40  MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIHSKPIKLQIW 99

Query: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK
Sbjct: 100 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 159

Query: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIQTAATIYKKIQDGVFDVSN 180
           CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIQTAATIYKKIQDGVFDVSN
Sbjct: 160 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIQTAATIYKKIQDGVFDVSN 219

Query: 181 ESYGIKVGYGGIPGPSGGRDGTTAQSGGCCG 212
           ESYGIKVGYGGIPGPSG RDGTTAQSGGCCG
Sbjct: 220 ESYGIKVGYGGIPGPSGSRDGTTAQSGGCCG 250

[Close]

BLAST of Carg24380 vs. ExPASy TrEMBL
Match: A0A6J1CNK8 (ras-related protein RABB1c OS=Momordica charantia OX=3673 GN=LOC111012746 PE=4 SV=1)

HSP 1 Score: 420.2 bits (1079), Expect = 5.0e-114
Identity = 207/210 (98.57%), Postives = 210/210 (100.00%), Query Frame = 0


Query: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDSKPIKLQIW 60
           MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDSKPIKLQIW
Sbjct: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDSKPIKLQIW 60

Query: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120

Query: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIQTAATIYKKIQDGVFDVSN 180
           CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFI+TAATIYKKIQDGVFDVSN
Sbjct: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSN 180

Query: 181 ESYGIKVGYGGIPGPSGGRDGTTAQSGGCC 211
           ESYGIKVGYGGIPGPSGGRDGT+AQ+GGCC
Sbjct: 181 ESYGIKVGYGGIPGPSGGRDGTSAQAGGCC 210

[Close]

BLAST of Carg24380 vs. ExPASy TrEMBL
Match: A0A218XLU8 (ras-related protein RABB1c OS=Punica granatum OX=22663 GN=LOC116208255 PE=4 SV=1)

HSP 1 Score: 419.9 bits (1078), Expect = 6.5e-114
Identity = 207/210 (98.57%), Postives = 209/210 (99.52%), Query Frame = 0


Query: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDSKPIKLQIW 60
           MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDSKPIKLQIW
Sbjct: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDSKPIKLQIW 60

Query: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120

Query: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIQTAATIYKKIQDGVFDVSN 180
           CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFI+TAATIYKKIQDGVFDVSN
Sbjct: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSN 180

Query: 181 ESYGIKVGYGGIPGPSGGRDGTTAQSGGCC 211
           ESYGIKVGYGGIPGPSGGRDG T+QSGGCC
Sbjct: 181 ESYGIKVGYGGIPGPSGGRDGATSQSGGCC 210

[Close]

BLAST of Carg24380 vs. ExPASy TrEMBL
Match: A0A0A0LYF8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G172570 PE=4 SV=1)

HSP 1 Score: 419.9 bits (1078), Expect = 6.5e-114
Identity = 207/210 (98.57%), Postives = 209/210 (99.52%), Query Frame = 0


Query: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDSKPIKLQIW 60
           MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITID+KPIKLQIW
Sbjct: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW 60

Query: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120

Query: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIQTAATIYKKIQDGVFDVSN 180
           CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFI+TAATIYKKIQDGVFDVSN
Sbjct: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSN 180

Query: 181 ESYGIKVGYGGIPGPSGGRDGTTAQSGGCC 211
           ESYGIKVGYGGIPGPSGGRDG TAQSGGCC
Sbjct: 181 ESYGIKVGYGGIPGPSGGRDGATAQSGGCC 210

[Close]

BLAST of Carg24380 vs. TAIR 10
Match: AT4G17170.1 (RAB GTPase homolog B1C )

HSP 1 Score: 419.1 bits (1076), Expect = 2.1e-117
Identity = 206/211 (97.63%), Postives = 210/211 (99.53%), Query Frame = 0


Query: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDSKPIKLQIW 60
           MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITID+KPIKLQIW
Sbjct: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW 60

Query: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120

Query: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIQTAATIYKKIQDGVFDVSN 180
           CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFI+TAATIYKKIQDGVFDVSN
Sbjct: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSN 180

Query: 181 ESYGIKVGYGGIPGPSGGRDGTTAQSGGCCG 212
           ESYGIKVGYGGIPGPSGGRDG+T+Q GGCCG
Sbjct: 181 ESYGIKVGYGGIPGPSGGRDGSTSQGGGCCG 211

[Close]

BLAST of Carg24380 vs. TAIR 10
Match: AT4G35860.1 (GTP-binding 2 )

HSP 1 Score: 377.9 bits (969), Expect = 5.4e-105
Identity = 183/211 (86.73%), Postives = 197/211 (93.36%), Query Frame = 0


Query: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDSKPIKLQIW 60
           MSY YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM+T+D +PIKLQIW
Sbjct: 1   MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTVDGRPIKLQIW 60

Query: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHAN NM+IMLIGNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMSIMLIGNK 120

Query: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIQTAATIYKKIQDGVFDVSN 180
           CDLAH+RAVS EEG+QFAKEHGL+F+EASA+TAQNVEEAFI+TAA I + IQDGVFDVSN
Sbjct: 121 CDLAHKRAVSKEEGQQFAKEHGLLFLEASARTAQNVEEAFIETAAKILQNIQDGVFDVSN 180

Query: 181 ESYGIKVGYGGIPGPSGGRDGTTAQSGGCCG 212
           ES GIK+GYG   G +GGRDGT +Q GGCCG
Sbjct: 181 ESSGIKIGYGRTQGAAGGRDGTISQGGGCCG 211

[Close]

BLAST of Carg24380 vs. TAIR 10
Match: AT4G17160.1 (RAB GTPase homolog B1A )

HSP 1 Score: 334.3 bits (856), Expect = 6.9e-92
Identity = 168/212 (79.25%), Postives = 184/212 (86.79%), Query Frame = 0


Query: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDSKPIKLQIW 60
           MSYAY FKYIIIGDTGVGKSCLLL+FTDKRFQ VHDLTIGVEFGA+ ITID+KPIKLQIW
Sbjct: 1   MSYAYRFKYIIIGDTGVGKSCLLLKFTDKRFQAVHDLTIGVEFGAKTITIDNKPIKLQIW 60

Query: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120
           DTAGQESFRS+TRSYYRG AG LLVYDITRRETFNHLASWLE+ARQHA+ NMT MLIGNK
Sbjct: 61  DTAGQESFRSVTRSYYRGRAGTLLVYDITRRETFNHLASWLEEARQHASENMTTMLIGNK 120

Query: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIQTAATIYKKIQDGVFDVSN 180
           CDL  +R VSTEEGEQFA+EHGLIFMEASAKTA NVEEAF++TAATIYK+IQDGV D +N
Sbjct: 121 CDLEDKRTVSTEEGEQFAREHGLIFMEASAKTAHNVEEAFVETAATIYKRIQDGVVDEAN 180

Query: 181 ESYGIKVGYGGIPGPSGGRDGTTAQS-GGCCG 212
           E        G  PGP GG+D +++Q   GCCG
Sbjct: 181 EP-------GITPGPFGGKDASSSQQRRGCCG 205

[Close]

BLAST of Carg24380 vs. TAIR 10
Match: AT4G35860.2 (GTP-binding 2 )

HSP 1 Score: 284.6 bits (727), Expect = 6.3e-77
Identity = 138/165 (83.64%), Postives = 152/165 (92.12%), Query Frame = 0


Query: 47  MITIDSKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQ 106
           M+T+D +PIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQ
Sbjct: 1   MVTVDGRPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQ 60

Query: 107 HANANMTIMLIGNKCDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIQTAAT 166
           HAN NM+IMLIGNKCDLAH+RAVS EEG+QFAKEHGL+F+EASA+TAQNVEEAFI+TAA 
Sbjct: 61  HANPNMSIMLIGNKCDLAHKRAVSKEEGQQFAKEHGLLFLEASARTAQNVEEAFIETAAK 120

Query: 167 IYKKIQDGVFDVSNESYGIKVGYGGIPGPSGGRDGTTAQSGGCCG 212
           I + IQDGVFDVSNES GIK+GYG   G +GGRDGT +Q GGCCG
Sbjct: 121 ILQNIQDGVFDVSNESSGIKIGYGRTQGAAGGRDGTISQGGGCCG 165

[Close]

BLAST of Carg24380 vs. TAIR 10
Match: AT4G18430.1 (RAB GTPase homolog A1E )

HSP 1 Score: 194.9 bits (494), Expect = 6.5e-50
Identity = 102/209 (48.80%), Postives = 130/209 (62.20%), Query Frame = 0


Query: 3   YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDSKPIKLQIWDT 62
           Y YLFK ++IGD+GVGKS LL +FT   F      TIGVEF  R + +D K IK Q+WDT
Sbjct: 10  YDYLFKLVLIGDSGVGKSNLLSRFTRNEFSIESKSTIGVEFATRSVHVDEKIIKAQLWDT 69

Query: 63  AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCD 122
           AGQE +R+IT +YYRGA GALLVYDITR  TF ++  WL++ R H +AN+ IML+GNK D
Sbjct: 70  AGQERYRAITSAYYRGAVGALLVYDITRHITFENVERWLKELRDHTDANVVIMLVGNKAD 129

Query: 123 LAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIQTAATIYKKIQDGVFDVSNES 182
           L H RAV TEE   F++   + FME SA  A NVE+AF      IY+ +     D + + 
Sbjct: 130 LRHLRAVPTEEARSFSERENMFFMETSALDATNVEQAFTHVLTQIYRVMSRKALDGTGDP 189

Query: 183 YGIKVGYGGIPGPSGGRDGTTA-QSGGCC 211
             +  G        G +D  TA +S GCC
Sbjct: 190 MSLPKGQ---TIDIGNKDDVTAVKSSGCC 215

The following BLAST results are available for this feature:

BLAST of Carg24380 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7019338.1	1.9e-115	100.00	Ras-related protein RABB1c, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022927533.1	1.9e-115	100.00	ras-related protein RABB1c-like [Cucurbita moschata] >KAG6583677.1 Ras-related p...	[more]
XP_023520190.1	9.3e-115	99.53	LOW QUALITY PROTEIN: ras-related protein RABB1c-like [Cucurbita pepo subsp. pepo...	[more]
XP_038893942.1	3.5e-114	99.05	ras-related protein RABB1c isoform X2 [Benincasa hispida]	[more]
XP_022973163.1	6.0e-114	99.05	ras-related protein RABB1c-like [Cucurbita maxima]	[more]

BLAST of Carg24380 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P92963	3.0e-116	97.63	Ras-related protein RABB1c OS=Arabidopsis thaliana OX=3702 GN=RABB1C PE=1 SV=1	[more]
P49104	3.3e-107	91.43	Ras-related protein Rab-2-B OS=Zea mays OX=4577 GN=RAB2B PE=2 SV=1	[more]
P49103	4.8e-106	91.43	Ras-related protein Rab-2-A OS=Zea mays OX=4577 GN=RAB2A PE=2 SV=2	[more]
Q38922	7.7e-104	86.73	Ras-related protein RABB1b OS=Arabidopsis thaliana OX=3702 GN=RABB1B PE=2 SV=1	[more]
P36863	6.7e-100	86.38	GTP-binding protein yptV4 OS=Volvox carteri OX=3067 GN=YPTV4 PE=3 SV=1	[more]

BLAST of Carg24380 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EL97	9.1e-116	100.00	ras-related protein RABB1c-like OS=Cucurbita moschata OX=3662 GN=LOC111434331 PE...	[more]
A0A6J1IC90	2.9e-114	99.05	ras-related protein RABB1c-like OS=Cucurbita maxima OX=3661 GN=LOC111471671 PE=4...	[more]
A0A6J1CNK8	5.0e-114	98.57	ras-related protein RABB1c OS=Momordica charantia OX=3673 GN=LOC111012746 PE=4 S...	[more]
A0A218XLU8	6.5e-114	98.57	ras-related protein RABB1c OS=Punica granatum OX=22663 GN=LOC116208255 PE=4 SV=1	[more]
A0A0A0LYF8	6.5e-114	98.57	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G172570 PE=4 SV=1	[more]

BLAST of Carg24380 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G17170.1	2.1e-117	97.63	RAB GTPase homolog B1C	[more]
AT4G35860.1	5.4e-105	86.73	GTP-binding 2	[more]
AT4G17160.1	6.9e-92	79.25	RAB GTPase homolog B1A	[more]
AT4G35860.2	6.3e-77	83.64	GTP-binding 2	[more]
AT4G18430.1	6.5e-50	48.80	RAB GTPase homolog A1E	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00449	RASTRNSFRMNG	coord: 48..70 score: 53.4 coord: 7..28 score: 51.86 coord: 110..123 score: 49.81 coord: 145..167 score: 43.88 coord: 30..46 score: 32.76
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 7..170 e-value: 7.1E-106 score: 367.7
None	No IPR available	SMART	SM00173	ras_sub_4	coord: 4..170 e-value: 7.3E-38 score: 141.8
None	No IPR available	SMART	SM00176	ran_sub_2	coord: 12..211 e-value: 3.7E-5 score: 24.1
None	No IPR available	PANTHER	PTHR47979:SF64	SUBFAMILY NOT NAMED	coord: 1..211
None	No IPR available	PANTHER	PTHR47979	DRAB11-RELATED	coord: 1..211
None	No IPR available	PROSITE	PS51420	RHO	coord: 1..168 score: 9.708656
None	No IPR available	PROSITE	PS51419	RAB	coord: 2..210 score: 35.975567
None	No IPR available	CDD	cd01866	Rab2	coord: 3..170 e-value: 2.06778E-131 score: 364.437
IPR001806	Small GTPase	SMART	SM00174	rho_sub_3	coord: 9..170 e-value: 7.3E-12 score: 32.2
IPR001806	Small GTPase	PFAM	PF00071	Ras	coord: 8..168 e-value: 8.1E-63 score: 210.8
IPR001806	Small GTPase	PROSITE	PS51421	RAS	coord: 1..211 score: 19.470856
IPR005225	Small GTP-binding protein domain	TIGRFAM	TIGR00231	TIGR00231	coord: 7..160 e-value: 7.5E-33 score: 111.6
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 1..182 e-value: 2.3E-71 score: 241.3
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 2..179

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg24380-RA	Carg24380-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006888	endoplasmic reticulum to Golgi vesicle-mediated transport
biological_process	GO:0015031	protein transport
cellular_component	GO:0005794	Golgi apparatus
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding