Carg17502-RA (mRNA) Silver-seed gourd (SMH-JMG-627) v2

Overview
NameCarg17502-RA
TypemRNA
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionHeat shock protein DnaJ, cysteine-rich domain-containing protein
LocationCarg_Chr12: 11315971 .. 11320128 (-)
Sequence length405
RNA-Seq ExpressionCarg17502-RA
SyntenyCarg17502-RA
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTCTTGGATCAGCTCGAGGTTCCTCGTTCCGTGGATAGTTTGAGTTTACTGATTTTTTTCCCTCAATTTTCAGGTGCTGTCCAATGTGCTCAGTGTCAAGGAACAGGAGTGAATTCAGAGGATCACTTCAATGGACGGTTTAAAGCTGGTGGCTTATGCTGGTTGTGCAGGTATGCACAAAAAGCTCTACCTGCTTTTAATGATATTTTGTCCACCTTACTCTTTAGTAGAACTATAAATTACCATTAGCATGTCCTTAAACTCTCACAAGCTCGACTCGGGAGCTAAAAAGGTCAAATTTATGTTATGTGGGTTAAAGTCCGATTCTGATGACTCATCTATTTAGAGGGCGTTTAGCTCTAACTAGAGTGTTGTAACTCAGAGTTGAAAAGGTCGAACTTATGTTTTGTGGCTTAAAGTCTGATTCTGATGAGTCAATGAGTCATCTCCTTAGAGGGCGTTTAGCTCTCTAACTAGAGTATTGTAGCTCAGAGCTAAAAAAGTCAAACTTGTGTTATGTGGGTTAAAGTCCGATTCTGATGATTCAATGAGTCATGTACTTAGAGGACGTTTAGCTCACTAACTAGAGTATCGTAACTCAGAGCTAAAAAAGTCGAACTTGTGTTATGTGGGTTAAAGTCCGATTTTGATGATTCAATGAGTCATCTACTTAAAGGGCATTTAGCTCATGAGCTAGAGTACTATAACTCGGAGCTAAAAGGGTCAAATTTATGTTATGTGTGTTAAAGCCTGATTCTCATGACTCAATGAGTCATCTACTTAGAGGGTGTTTAACTCACGGACTAGAGTACTGTAACTCGGAGCTGAAAAGGTCGAACTTATGTTATGTGGGTTAAAGTCCAATTTTGATGATTCCATGAGTCATCTACTTAGAGGACGTTTAGCTCTCTAACTAGAGTGCAGTAACTCAGAGCTTAAAAGGTCGAACTTATGTTATGTGGGTTAAAGTTCGAATCTGATAACTCAATGAGTCATCTACTTAGAGGACATTTAGCTCACTAACTAGAGTACTGTAACTCGGAGCTAAAAAGGTCGAACTTATGTTATGTGGGTTAAAGTCCAATTATGATGACTCAACGAGTCATCGACTTAGAGGGTGTTTAGCTCACTAACTAGAGTACTACAACTCAGAGCTAAAAAAGTCAAACACCTTGTGTTATGTGGGTTAAAGTCCGATTCTGATGACTCAATGAGTCATCTACTTAGAGGGCGTTTAGTTCACTGTAACTCAGAGCTAAAAAGGTCGAACTTATGTTATGTGGATTAAAGTCCAGTTTCAATGACGACCTTGATGAGTCATCTACTCAAAGGACGTCTGTCTCACAAACTAGACTACTGTAACCCGAAGCTAAAAAGATCAAGCTTATGTCATCCGGGTCAAAACCATTACATCTATTATCCACGAGTCTAGTCAAGTATGCATAATCACGACCATGGTTCATTTCGGGTCTTTCGGGATTTCGTATAGAATTAACGATACTGAGGGTACCGTGATGAACATTGCAGAGGCAAAAGGGACATCCTGTGTGGTGGCTGTAATGGAGCAGGTTTTGTGGGTGGATTCATGAGTACAGCTGATAGTTAGTTCTTTCAGCTGCACCACAAATTTGAGTATTTTAAGATGAAAAAAGCCTATTAGTTTCAGTAATTTTGTATAATGGGTCACATTATTTCTAAGTTTGTATTTCAAAATTATGAATGTTCTTGTTTTGCTATATTGTTTTGTTGCATAATTTGAGATCGTTGAACGTAATGAATGGTTTTTACACGATTTTAGGTTTTTTAACGATGAAAATTGCCTATTTTTTGTTATGAATTGTCGCGAAATGTTAATATAAACATAACTCAGGACTCCTTACAATGGTATGATATCATTGTTCACTCTCGTGGCTTTGCTTTGGGCTTCCCTAGAAGGCCTCAATAAACCCATGACACTTTAGAGTATTCCTCACTTATAAACCATTTTTCCGAAACCCTCGAACAAAGTACACCCTTTGTTCGACACTTTAGTCACTTTGGACTATACCTTCGAGGCTCACAATTCTTTGTTCGATATTTGAGGATTCTATTGACATGGCTTGGCTAAGTTTAGCTTCGAGGCTCACAATTCTTTGTTCGATATTCGAGGATTCTATTGACATGGCTCACAATTCTTTGTTTGATATTTGAGGATTCTATCGACGTAGCTAAGTTTAGGGCATGACTTTGATACCATGTTAGGAATCACGGATCTCCACAATGGTATGATATTGTCCACTTTGAGCATAAGCTCTCATGGCTTTGCTTTGGGCTTCTCCCGAAGGCTTCGTACCAATGGAGATAGTATTCCTCACTTATAAATTCATTATCTTCCACTAAATTAACAAACTGGGCTTCCTCCGAAGGCTTCGTTCCAATGGAGATAGTATTTCTCACTTATAAACCCATTATCTTCCACTAAATTAACGAACTTGGGATTCACTCCTAATAATCCTCAACACCACACTGGGTAAACCCTCGGTAAAAGAGTGCTTTCTTCTTACGATCTCCTTATCAGATCAGCTTCTCCTTCTTCTTTCACTACTTGAGCGTTGTTATTTCTGTAAGTTTGTTCTCCATTTTTGAAGTTCTTAGCTTCTTCCAATTGCCAATTTGTGAATGATTTTCTTTGGGATTACCTACTTGTATTATGGATCATGAAACACTGCCCGGAAATTTCCGTTCCATCAAAATTGGGCTCTGATTACGCGGGCTAGTTAGGGTTCGAGATGAATTATTGAGAGAAGTATTCAACGGCCGCATTGCGGTGGTCGTTTTCAAATTCCATACTTTCTTGCGTTGCGGATATTGGACATTGCGTAATGCCCACCAACTGTTCGATGAAATTCCTCTATGAAATGGTATATTTTACTTCTTCATCCGTCTTCATTTCCCCTCAATGTGGCTGTCACTTTCCAAAATTCTGCTATTTTCGTGTGACAAATATTGATCATTGGATATTGCCCACCGAATGTTCGATGAAATTCTATTATAAATTGGTATAATTGTACATATTCTCCCTTCTTCATTCCCTCTCAATGTGGCTGTCGCTTCCAAATTTATACTCCTTTCTGATGATGAACATTGAACATTGCATAGTGCCCACCAATTGTTTGGCTAATAAGTGGTATGCTCTTACATGTTCATCCTTCTTTGCTCCCCCACACATAAAAGGAAAAAAGTAATCCATTGAGAATTGAAATTTGTGGTTTTAGATTCAAAAGGTAGCTGTTTTTCTGATGATGAACATTGAACATTGAACATTGAATACTGCCTACCAATTGTTTGACTAATAAGTGGTATGCTCTTACATGTTCATCCTTCAAAATGTAATCCACTGAGAATTGAAATTTGTGGTTTTAGATTCAAAGGGTAGCTGTTTTTCTGTTTGGTATATCAATTTTTCTCTAGAACCTTTGATTTTGTAAGTACTAGTTATGATGTCAGATCTGTACAATGAAGAAAGGCTTGCACCCTCAAATGCAATGGATATCATAATGTCACTCAGAGTGGCAAATTGATGCATGTCAATGATGACCAAGGTACACCTTGTTGGTAAAGTCTACCACTTCAGAGCCAAGCGTCGACCGACTGAAAATGCTGGGCAAGCTGCCAAGTTCAAATGACGTTACGAGATGCAGCTCAAGGATCAACTATTTCCTTGGATCATTATGGATTCGTTTCGATAACATGACCTTGTGAATATTAGGAATTCAAAGTACCTTCTACTCAATGGAGTTTATCCCTTTTCATAGTCTATTCATAGTCTAGTGTTTTATAGGAAACTGAGTTCTTTCCTATATTGACTTTGATGTGCTTTTACCTTTACTATGCAGCTCAAGTTTCAACTGTTATGGATTTGTTTCGATAACATGGCCTTGTGAGTATTAGGAATTTAAAGTTCCCTTCTACCCGACGGAGTTCATCCCATTTCATAGTCTAGCATTCTATAGAAACTGAGTTATTTCTTATATTGGCTTTGATATGCTTTTACCTTTACTATGCAGCTCGAGGATCAACTGTTTCATTGGATCATTATGGATTCGTTTCGATAACATGACCTTGTGAGTATTATGAATTTAAAGTTCCCTTCTACTTAATGGAATTCGTCCCTTT

mRNA sequence

ATGTTCTTGGATCAGCTCGAGGTTCCTCGTTCCGTGGATAGTTTGAGTTTACTGATTTTTTTCCCTCAATTTTCAGGTGCTGTCCAATGTGCTCAGTGTCAAGGAACAGGAGTGAATTCAGAGGATCACTTCAATGGACGGTTTAAAGCTGGTGGCTTATGCTGGTTGTGCAGAATTAACGATACTGAGGGTACCGTGATGAACATTGCAGAGGCAAAAGGGACATCCTGTGTGGTGGCTGTAATGGAGCAGCTCAAGTTTCAACTGTTATGGATTTGTTTCGATAACATGGCCTTCTCGAGGATCAACTGTTTCATTGGATCATTATGGATTCGTTTCGATAACATGACCTTGTGAGTATTATGAATTTAAAGTTCCCTTCTACTTAATGGAATTCGTCCCTTT

Coding sequence (CDS)

ATGTTCTTGGATCAGCTCGAGGTTCCTCGTTCCGTGGATAGTTTGAGTTTACTGATTTTTTTCCCTCAATTTTCAGGTGCTGTCCAATGTGCTCAGTGTCAAGGAACAGGAGTGAATTCAGAGGATCACTTCAATGGACGGTTTAAAGCTGGTGGCTTATGCTGGTTGTGCAGAATTAACGATACTGAGGGTACCGTGATGAACATTGCAGAGGCAAAAGGGACATCCTGTGTGGTGGCTGTAATGGAGCAGCTCAAGTTTCAACTGTTATGGATTTGTTTCGATAACATGGCCTTCTCGAGGATCAACTGTTTCATTGGATCATTATGGATTCGTTTCGATAACATGACCTTGTGA

Protein sequence

MFLDQLEVPRSVDSLSLLIFFPQFSGAVQCAQCQGTGVNSEDHFNGRFKAGGLCWLCRINDTEGTVMNIAEAKGTSCVVAVMEQLKFQLLWICFDNMAFSRINCFIGSLWIRFDNMTL
Homology
[Close]
BLAST of Carg17502-RA vs. NCBI nr
Match: KAG7021244.1 (hypothetical protein SDJN02_17932, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 250.0 bits (637), Expect = 1.0e-62
Identity = 118/118 (100.00%), Postives = 118/118 (100.00%), Query Frame = 0 

Query: 1   MFLDQLEVPRSVDSLSLLIFFPQFSGAVQCAQCQGTGVNSEDHFNGRFKAGGLCWLCRIN 60
           MFLDQLEVPRSVDSLSLLIFFPQFSGAVQCAQCQGTGVNSEDHFNGRFKAGGLCWLCRIN
Sbjct: 1   MFLDQLEVPRSVDSLSLLIFFPQFSGAVQCAQCQGTGVNSEDHFNGRFKAGGLCWLCRIN 60

Query: 61  DTEGTVMNIAEAKGTSCVVAVMEQLKFQLLWICFDNMAFSRINCFIGSLWIRFDNMTL 119
           DTEGTVMNIAEAKGTSCVVAVMEQLKFQLLWICFDNMAFSRINCFIGSLWIRFDNMTL
Sbjct: 61  DTEGTVMNIAEAKGTSCVVAVMEQLKFQLLWICFDNMAFSRINCFIGSLWIRFDNMTL 118

[Close]
BLAST of Carg17502-RA vs. NCBI nr
Match: XP_023537582.1 (uncharacterized protein LOC111798573 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 80.5 bits (197), Expect = 1.1e-11
Identity = 33/34 (97.06%), Postives = 34/34 (100.00%), Query Frame = 0 

Query: 25  SGAVQCAQCQGTGVNSEDHFNGRFKAGGLCWLCR 59
           +GAVQCAQCQGTGVNSEDHFNGRFKAGGLCWLCR
Sbjct: 80  NGAVQCAQCQGTGVNSEDHFNGRFKAGGLCWLCR 113

[Close]
BLAST of Carg17502-RA vs. NCBI nr
Match: XP_022938233.1 (uncharacterized protein LOC111444376 [Cucurbita moschata])

HSP 1 Score: 80.5 bits (197), Expect = 1.1e-11
Identity = 33/34 (97.06%), Postives = 34/34 (100.00%), Query Frame = 0 

Query: 25  SGAVQCAQCQGTGVNSEDHFNGRFKAGGLCWLCR 59
           +GAVQCAQCQGTGVNSEDHFNGRFKAGGLCWLCR
Sbjct: 80  NGAVQCAQCQGTGVNSEDHFNGRFKAGGLCWLCR 113

[Close]
BLAST of Carg17502-RA vs. NCBI nr
Match: KAG6586393.1 (Protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 80.5 bits (197), Expect = 1.1e-11
Identity = 33/34 (97.06%), Postives = 34/34 (100.00%), Query Frame = 0 

Query: 25  SGAVQCAQCQGTGVNSEDHFNGRFKAGGLCWLCR 59
           +GAVQCAQCQGTGVNSEDHFNGRFKAGGLCWLCR
Sbjct: 80  NGAVQCAQCQGTGVNSEDHFNGRFKAGGLCWLCR 113

[Close]
BLAST of Carg17502-RA vs. NCBI nr
Match: XP_022965999.1 (uncharacterized protein LOC111465718 [Cucurbita maxima])

HSP 1 Score: 80.5 bits (197), Expect = 1.1e-11
Identity = 33/34 (97.06%), Postives = 34/34 (100.00%), Query Frame = 0 

Query: 25  SGAVQCAQCQGTGVNSEDHFNGRFKAGGLCWLCR 59
           +GAVQCAQCQGTGVNSEDHFNGRFKAGGLCWLCR
Sbjct: 80  NGAVQCAQCQGTGVNSEDHFNGRFKAGGLCWLCR 113

[Close]
BLAST of Carg17502-RA vs. ExPASy Swiss-Prot
Match: Q9SN73 (Protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=BSD2 PE=1 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 2.3e-09
Identity = 27/50 (54.00%), Postives = 33/50 (66.00%), Query Frame = 0 

Query: 9   PRSVDSLSLLIFFPQFSGAVQCAQCQGTGVNSEDHFNGRFKAGGLCWLCR 59
           P+     SL+    +  G V C+QC+G GVN  DHFNG+FKAG LCWLCR
Sbjct: 62  PQGTKPNSLVCANCEGEGCVACSQCKGGGVNLIDHFNGQFKAGALCWLCR 111

[Close]
BLAST of Carg17502-RA vs. ExPASy Swiss-Prot
Match: Q9XF14 (Protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic OS=Zea mays OX=4577 GN=BSD2 PE=2 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 6.8e-09
Identity = 23/34 (67.65%), Postives = 28/34 (82.35%), Query Frame = 0 

Query: 25  SGAVQCAQCQGTGVNSEDHFNGRFKAGGLCWLCR 59
           +GA+ C +C+G GVNS D+F GRFKAG LCWLCR
Sbjct: 68  NGAIVCTKCEGNGVNSVDYFEGRFKAGSLCWLCR 101

[Close]
BLAST of Carg17502-RA vs. ExPASy TrEMBL
Match: A0A6J1HSG2 (uncharacterized protein LOC111465718 OS=Cucurbita maxima OX=3661 GN=LOC111465718 PE=4 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 5.2e-12
Identity = 33/34 (97.06%), Postives = 34/34 (100.00%), Query Frame = 0 

Query: 25  SGAVQCAQCQGTGVNSEDHFNGRFKAGGLCWLCR 59
           +GAVQCAQCQGTGVNSEDHFNGRFKAGGLCWLCR
Sbjct: 80  NGAVQCAQCQGTGVNSEDHFNGRFKAGGLCWLCR 113

[Close]
BLAST of Carg17502-RA vs. ExPASy TrEMBL
Match: A0A6J1FIB2 (uncharacterized protein LOC111444376 OS=Cucurbita moschata OX=3662 GN=LOC111444376 PE=4 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 5.2e-12
Identity = 33/34 (97.06%), Postives = 34/34 (100.00%), Query Frame = 0 

Query: 25  SGAVQCAQCQGTGVNSEDHFNGRFKAGGLCWLCR 59
           +GAVQCAQCQGTGVNSEDHFNGRFKAGGLCWLCR
Sbjct: 80  NGAVQCAQCQGTGVNSEDHFNGRFKAGGLCWLCR 113

[Close]
BLAST of Carg17502-RA vs. ExPASy TrEMBL
Match: A0A6A5NU30 (Uncharacterized protein OS=Lupinus albus OX=3870 GN=Lal_00041045 PE=4 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 1.2e-11
Identity = 32/43 (74.42%), Postives = 35/43 (81.40%), Query Frame = 0 

Query: 16  SLLIFFPQFSGAVQCAQCQGTGVNSEDHFNGRFKAGGLCWLCR 59
           SL   F Q  GA+ C QC+GTG+NSEDHFNGRFKAGGLCWLCR
Sbjct: 84  SLCYMFSQLPGAILCTQCKGTGINSEDHFNGRFKAGGLCWLCR 126

[Close]
BLAST of Carg17502-RA vs. ExPASy TrEMBL
Match: A0A1U8DYJ8 (uncharacterized protein LOC107840731 OS=Capsicum annuum OX=4072 GN=LOC107840731 PE=4 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 7.5e-11
Identity = 32/39 (82.05%), Postives = 34/39 (87.18%), Query Frame = 0 

Query: 20 FFPQFSGAVQCAQCQGTGVNSEDHFNGRFKAGGLCWLCR 59
          F P  +GAV CAQC+GTGVNS DHFNGRFKAGGLCWLCR
Sbjct: 3  FNPHGNGAVACAQCKGTGVNSVDHFNGRFKAGGLCWLCR 41

[Close]
BLAST of Carg17502-RA vs. ExPASy TrEMBL
Match: A0A6J1CMI1 (uncharacterized protein LOC111012989 OS=Momordica charantia OX=3673 GN=LOC111012989 PE=4 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 1.3e-10
Identity = 30/34 (88.24%), Postives = 33/34 (97.06%), Query Frame = 0 

Query: 25  SGAVQCAQCQGTGVNSEDHFNGRFKAGGLCWLCR 59
           +GAV C+QC+GTGVNSEDHFNGRFKAGGLCWLCR
Sbjct: 80  NGAVNCSQCKGTGVNSEDHFNGRFKAGGLCWLCR 113

[Close]
BLAST of Carg17502-RA vs. TAIR 10
Match: AT3G47650.1 (DnaJ/Hsp40 cysteine-rich domain superfamily protein )

HSP 1 Score: 63.2 bits (152), Expect = 1.7e-10
Identity = 27/50 (54.00%), Postives = 33/50 (66.00%), Query Frame = 0 

Query: 9   PRSVDSLSLLIFFPQFSGAVQCAQCQGTGVNSEDHFNGRFKAGGLCWLCR 59
           P+     SL+    +  G V C+QC+G GVN  DHFNG+FKAG LCWLCR
Sbjct: 62  PQGTKPNSLVCANCEGEGCVACSQCKGGGVNLIDHFNGQFKAGALCWLCR 111

The following BLAST results are available for this feature:
BLAST of Carg17502-RA vs. NCBI nr
Match NameE-valueIdentityDescription
KAG7021244.11.0e-62100.00hypothetical protein SDJN02_17932, partial [Cucurbita argyrosperma subsp. argyro... [more]
XP_023537582.11.1e-1197.06uncharacterized protein LOC111798573 [Cucurbita pepo subsp. pepo][more]
XP_022938233.11.1e-1197.06uncharacterized protein LOC111444376 [Cucurbita moschata][more]
KAG6586393.11.1e-1197.06Protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic, partial [Cucurbita argyrosperm... [more]
XP_022965999.11.1e-1197.06uncharacterized protein LOC111465718 [Cucurbita maxima][more]
BLAST of Carg17502-RA vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9SN732.3e-0954.00Protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic OS=Arabidopsis thaliana OX=3702... [more]
Q9XF146.8e-0967.65Protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic OS=Zea mays OX=4577 GN=BSD2 PE=... [more]
BLAST of Carg17502-RA vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1HSG25.2e-1297.06uncharacterized protein LOC111465718 OS=Cucurbita maxima OX=3661 GN=LOC111465718... [more]
A0A6J1FIB25.2e-1297.06uncharacterized protein LOC111444376 OS=Cucurbita moschata OX=3662 GN=LOC1114443... [more]
A0A6A5NU301.2e-1174.42Uncharacterized protein OS=Lupinus albus OX=3870 GN=Lal_00041045 PE=4 SV=1[more]
A0A1U8DYJ87.5e-1182.05uncharacterized protein LOC107840731 OS=Capsicum annuum OX=4072 GN=LOC107840731 ... [more]
A0A6J1CMI11.3e-1088.24uncharacterized protein LOC111012989 OS=Momordica charantia OX=3673 GN=LOC111012... [more]
BLAST of Carg17502-RA vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G47650.11.7e-1054.00DnaJ/Hsp40 cysteine-rich domain superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR15852:SF51PROTEIN BUNDLE SHEATH DEFECTIVE 2, CHLOROPLASTICcoord: 25..60
NoneNo IPR availablePANTHERPTHR15852PLASTID TRANSCRIPTIONALLY ACTIVE PROTEINcoord: 25..60

Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Carg17502Carg17502gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Carg17502-RA:4Carg17502-RA:4exon
Carg17502-RA:3Carg17502-RA:3exon
Carg17502-RA:2Carg17502-RA:2exon
Carg17502-RA:1Carg17502-RA:1exon


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Carg17502-RA:three_prime_utrCarg17502-RA:three_prime_utrthree_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Carg17502-RA:cdsCarg17502-RA:cds_4CDS
Carg17502-RA:cdsCarg17502-RA:cds_3CDS
Carg17502-RA:cdsCarg17502-RA:cds_2CDS
Carg17502-RA:cdsCarg17502-RA:cdsCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Carg17502-RACarg17502-RA-proteinpolypeptide


GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0061077 chaperone-mediated protein folding
biological_process GO:0110102 ribulose bisphosphate carboxylase complex assembly
cellular_component GO:0101031 chaperone complex
cellular_component GO:0009570 chloroplast stroma
molecular_function GO:1905538 polysome binding
molecular_function GO:0044183 protein folding chaperone