Carg15611-RA (mRNA) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg15611-RA
Type	mRNA
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Oleosin
Location	Carg_Chr11: 11117220 .. 11117714 (+)
Sequence length	495
RNA-Seq Expression	Carg15611-RA
Synteny	Carg15611-RA

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCGACCGCCCACAGCCGCACCAAATCCAAGTCCATCCCCAGCGCCGCTACGACGACGTCGGCGCCAAGGGCCGCACAGGCCCATCCACCTCCACAATCCTCGCCATCATAACCCTCGTCCCGCTCGGGGGCTCGCTGCTCGGGCTCGCCGGGTTGACTCTAGCGGTGACGCTGGTCGGGCTGGCAGTAGCCACTCCAGTGTTCGTGATCTTCAGCCCGGTTCTGGTCCCAGCCATCTTAACCATAGGGCTAGCCGTCCTGGCGTTCTTGACCTCCGGGGCGTTCGGGCTCACCGCGCTGTCTTCGCTTACGTGGGCTTTCAATTACGTTCGGCGGGCGATGGGGTTCATGCCGGACCAGATTGACCAAGCGAAGCGGCGCATGCAGGATATGGCTGGGTATGTGGGGCAGAAGACCAAGGATCTGGGGCAGGAGATTCAAAGCAGGACGACGACGACCACCGCGGCTCAGGAACAAGGGAGGAGGACATGA

mRNA sequence

ATGGCCGACCGCCCACAGCCGCACCAAATCCAAGTCCATCCCCAGCGCCGCTACGACGACGTCGGCGCCAAGGGCCGCACAGGCCCATCCACCTCCACAATCCTCGCCATCATAACCCTCGTCCCGCTCGGGGGCTCGCTGCTCGGGCTCGCCGGGTTGACTCTAGCGGTGACGCTGGTCGGGCTGGCAGTAGCCACTCCAGTGTTCGTGATCTTCAGCCCGGTTCTGGTCCCAGCCATCTTAACCATAGGGCTAGCCGTCCTGGCGTTCTTGACCTCCGGGGCGTTCGGGCTCACCGCGCTGTCTTCGCTTACGTGGGCTTTCAATTACGTTCGGCGGGCGATGGGGTTCATGCCGGACCAGATTGACCAAGCGAAGCGGCGCATGCAGGATATGGCTGGGTATGTGGGGCAGAAGACCAAGGATCTGGGGCAGGAGATTCAAAGCAGGACGACGACGACCACCGCGGCTCAGGAACAAGGGAGGAGGACATGA

Coding sequence (CDS)

ATGGCCGACCGCCCACAGCCGCACCAAATCCAAGTCCATCCCCAGCGCCGCTACGACGACGTCGGCGCCAAGGGCCGCACAGGCCCATCCACCTCCACAATCCTCGCCATCATAACCCTCGTCCCGCTCGGGGGCTCGCTGCTCGGGCTCGCCGGGTTGACTCTAGCGGTGACGCTGGTCGGGCTGGCAGTAGCCACTCCAGTGTTCGTGATCTTCAGCCCGGTTCTGGTCCCAGCCATCTTAACCATAGGGCTAGCCGTCCTGGCGTTCTTGACCTCCGGGGCGTTCGGGCTCACCGCGCTGTCTTCGCTTACGTGGGCTTTCAATTACGTTCGGCGGGCGATGGGGTTCATGCCGGACCAGATTGACCAAGCGAAGCGGCGCATGCAGGATATGGCTGGGTATGTGGGGCAGAAGACCAAGGATCTGGGGCAGGAGATTCAAAGCAGGACGACGACGACCACCGCGGCTCAGGAACAAGGGAGGAGGACATGA

Protein sequence

MADRPQPHQIQVHPQRRYDDVGAKGRTGPSTSTILAIITLVPLGGSLLGLAGLTLAVTLVGLAVATPVFVIFSPVLVPAILTIGLAVLAFLTSGAFGLTALSSLTWAFNYVRRAMGFMPDQIDQAKRRMQDMAGYVGQKTKDLGQEIQSRTTTTTAAQEQGRRT

Homology

[Close]

BLAST of Carg15611-RA vs. NCBI nr
Match: XP_022928435.1 (oleosin 18.2 kDa-like [Cucurbita moschata] >KAG6588945.1 Oleosin 5, partial [Cucurbita argyrosperma subsp. sororia] >KAG7022713.1 Oleosin 5, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 300.8 bits (769), Expect = 7.1e-78
Identity = 164/164 (100.00%), Postives = 164/164 (100.00%), Query Frame = 0


Query: 1   MADRPQPHQIQVHPQRRYDDVGAKGRTGPSTSTILAIITLVPLGGSLLGLAGLTLAVTLV 60
           MADRPQPHQIQVHPQRRYDDVGAKGRTGPSTSTILAIITLVPLGGSLLGLAGLTLAVTLV
Sbjct: 1   MADRPQPHQIQVHPQRRYDDVGAKGRTGPSTSTILAIITLVPLGGSLLGLAGLTLAVTLV 60

Query: 61  GLAVATPVFVIFSPVLVPAILTIGLAVLAFLTSGAFGLTALSSLTWAFNYVRRAMGFMPD 120
           GLAVATPVFVIFSPVLVPAILTIGLAVLAFLTSGAFGLTALSSLTWAFNYVRRAMGFMPD
Sbjct: 61  GLAVATPVFVIFSPVLVPAILTIGLAVLAFLTSGAFGLTALSSLTWAFNYVRRAMGFMPD 120

Query: 121 QIDQAKRRMQDMAGYVGQKTKDLGQEIQSRTTTTTAAQEQGRRT 165
           QIDQAKRRMQDMAGYVGQKTKDLGQEIQSRTTTTTAAQEQGRRT
Sbjct: 121 QIDQAKRRMQDMAGYVGQKTKDLGQEIQSRTTTTTAAQEQGRRT 164

[Close]

BLAST of Carg15611-RA vs. NCBI nr
Match: XP_023529459.1 (oleosin 18.2 kDa-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 293.9 bits (751), Expect = 8.6e-76
Identity = 163/166 (98.19%), Postives = 163/166 (98.19%), Query Frame = 0


Query: 1   MADRPQPHQIQVHPQRRYDDVGAKGRTGPSTSTILAIITLVPLGGSLLGLAGLTLAVTLV 60
           MADRPQPHQIQVHPQRRYDDVGAKGRTGPSTSTILAIITLVPLGGSLLGLAGLTLAVTLV
Sbjct: 1   MADRPQPHQIQVHPQRRYDDVGAKGRTGPSTSTILAIITLVPLGGSLLGLAGLTLAVTLV 60

Query: 61  GLAVATPVFVIFSPVLVPAILTIGLAVLAFLTSGAFGLTALSSLTWAFNYVRRAMGFMPD 120
           GLAVATPVFVIFSPVLVPAILTIGLAVLAFLTSGAFGLTALSSLTWAFNYVRRAMGFMPD
Sbjct: 61  GLAVATPVFVIFSPVLVPAILTIGLAVLAFLTSGAFGLTALSSLTWAFNYVRRAMGFMPD 120

Query: 121 QIDQAKRRMQDMAGYVGQKTKDLGQEIQSR--TTTTTAAQEQGRRT 165
           QIDQAKRRMQDMAGYVGQKTKDLGQEIQSR  TTTTTA QEQGRRT
Sbjct: 121 QIDQAKRRMQDMAGYVGQKTKDLGQEIQSRTTTTTTTAPQEQGRRT 166

[Close]

BLAST of Carg15611-RA vs. NCBI nr
Match: XP_022989214.1 (oleosin 18.2 kDa-like [Cucurbita maxima])

HSP 1 Score: 287.3 bits (734), Expect = 8.1e-74
Identity = 160/164 (97.56%), Postives = 160/164 (97.56%), Query Frame = 0


Query: 1   MADRPQPHQIQVHPQRRYDDVGAKGRTGPSTSTILAIITLVPLGGSLLGLAGLTLAVTLV 60
           MADRPQPHQIQVHPQRRYDDVGAKGRTGPSTSTILAIITLVPLGGSLLGLAGLTLAVTLV
Sbjct: 1   MADRPQPHQIQVHPQRRYDDVGAKGRTGPSTSTILAIITLVPLGGSLLGLAGLTLAVTLV 60

Query: 61  GLAVATPVFVIFSPVLVPAILTIGLAVLAFLTSGAFGLTALSSLTWAFNYVRRAMGFMPD 120
           GLAVATPVFVIFSPVLVPAILTIGLAVLAFLTSGA GLTALSSLTWAFNYVRRAMGFMPD
Sbjct: 61  GLAVATPVFVIFSPVLVPAILTIGLAVLAFLTSGACGLTALSSLTWAFNYVRRAMGFMPD 120

Query: 121 QIDQAKRRMQDMAGYVGQKTKDLGQEIQSRTTTTTAAQEQGRRT 165
           QIDQAKRRMQDMAGYVGQKTKDLGQEIQSRTT T  AQEQGRRT
Sbjct: 121 QIDQAKRRMQDMAGYVGQKTKDLGQEIQSRTTPT--AQEQGRRT 162

[Close]

BLAST of Carg15611-RA vs. NCBI nr
Match: XP_022935477.1 (oleosin 18.2 kDa-like [Cucurbita moschata])

HSP 1 Score: 270.8 bits (691), Expect = 7.8e-69
Identity = 147/164 (89.63%), Postives = 153/164 (93.29%), Query Frame = 0


Query: 1   MADRPQPHQIQVHPQRRYDDVGAKGRTGPSTSTILAIITLVPLGGSLLGLAGLTLAVTLV 60
           MADRPQPHQIQVHPQRRYDDVGAKGR GPS STILA++TLVPLGGSLLGLAGLTLAVTLV
Sbjct: 46  MADRPQPHQIQVHPQRRYDDVGAKGRAGPSASTILAVVTLVPLGGSLLGLAGLTLAVTLV 105

Query: 61  GLAVATPVFVIFSPVLVPAILTIGLAVLAFLTSGAFGLTALSSLTWAFNYVRRAMGFMPD 120
           GLAV  PVF+IFSP+LVPAILTIGLAVLAFLTSGAFGLTALSSLTWAFNY+RRA GFMPD
Sbjct: 106 GLAVFIPVFIIFSPILVPAILTIGLAVLAFLTSGAFGLTALSSLTWAFNYIRRAAGFMPD 165

Query: 121 QIDQAKRRMQDMAGYVGQKTKDLGQEIQSRTTTTTAAQEQGRRT 165
           QIDQAKRRMQDMAGYVGQKTKDLGQEIQSRT      QEQGR+T
Sbjct: 166 QIDQAKRRMQDMAGYVGQKTKDLGQEIQSRT------QEQGRKT 203

[Close]

BLAST of Carg15611-RA vs. NCBI nr
Match: XP_023528638.1 (oleosin 18.2 kDa-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 270.8 bits (691), Expect = 7.8e-69
Identity = 147/164 (89.63%), Postives = 153/164 (93.29%), Query Frame = 0


Query: 1   MADRPQPHQIQVHPQRRYDDVGAKGRTGPSTSTILAIITLVPLGGSLLGLAGLTLAVTLV 60
           MADRPQPHQIQVHPQRRYDDVGAKGR GPS STILA++TLVPLGGSLLGLAGLTLAVTLV
Sbjct: 46  MADRPQPHQIQVHPQRRYDDVGAKGRAGPSASTILAVVTLVPLGGSLLGLAGLTLAVTLV 105

Query: 61  GLAVATPVFVIFSPVLVPAILTIGLAVLAFLTSGAFGLTALSSLTWAFNYVRRAMGFMPD 120
           GLAV  PVF+IFSP+LVPAILTIGLAVLAFLTSGAFGLTALSSLTWAFNY+RRA GFMPD
Sbjct: 106 GLAVFIPVFIIFSPILVPAILTIGLAVLAFLTSGAFGLTALSSLTWAFNYIRRAAGFMPD 165

Query: 121 QIDQAKRRMQDMAGYVGQKTKDLGQEIQSRTTTTTAAQEQGRRT 165
           QIDQAKRRMQDMAGYVGQKTKDLGQEIQSRT      QEQGR+T
Sbjct: 166 QIDQAKRRMQDMAGYVGQKTKDLGQEIQSRT------QEQGRKT 203

[Close]

BLAST of Carg15611-RA vs. ExPASy Swiss-Prot
Match: P29527 (Oleosin 18.2 kDa OS=Gossypium hirsutum OX=3635 GN=MATP6-A PE=2 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 4.3e-38
Identity = 90/154 (58.44%), Postives = 118/154 (76.62%), Query Frame = 0


Query: 3   DRPQPHQIQVHPQRRYDDV-----GAKG-RTGPSTSTILAIITLVPLGGSLLGLAGLTLA 62
           DR  PHQ+QVHPQ R D+      GAK   +GPSTS +LA++TL+P+GG+LL LAGLTLA
Sbjct: 6   DRNLPHQVQVHPQYRLDNTTGGGYGAKNYHSGPSTSQVLAVLTLLPIGGTLLALAGLTLA 65

Query: 63  VTLVGLAVATPVFVIFSPVLVPAILTIGLAVLAFLTSGAFGLTALSSLTWAFNYVRRAMG 122
            T++GL +ATP+F+IFSPVLVPA + I +AV  FL+SGAFGLT LSSL++  N +R A G
Sbjct: 66  GTVIGLMLATPLFIIFSPVLVPAAIAIAMAVTGFLSSGAFGLTGLSSLSYVLNRLRYATG 125

Query: 123 FMPDQIDQAKRRMQDMAGYVGQKTKDLGQEIQSR 151
                +D AKRR+QDM  YVGQKTK++GQ+I+++
Sbjct: 126 TEQLDLDHAKRRVQDMTEYVGQKTKEVGQKIENK 159

[Close]

BLAST of Carg15611-RA vs. ExPASy Swiss-Prot
Match: Q647G5 (Oleosin Ara h 10.0101 OS=Arachis hypogaea OX=3818 GN=Ahy_A06g029932 PE=1 SV=2)

HSP 1 Score: 154.8 bits (390), Expect = 8.2e-37
Identity = 88/169 (52.07%), Postives = 117/169 (69.23%), Query Frame = 0


Query: 1   MADRPQPHQIQVHPQR-RYDDVGAKGR----TGPSTSTILAIITLVPLGGSLLGLAGLTL 60
           M DR QPH +QVH    R+ D  A        GPSTS ++A+IT +P+GG+LL  AGL L
Sbjct: 1   MTDRTQPHTVQVHTTAGRFGDTAAGTNRYPDRGPSTSKVIAVITGLPIGGTLLLFAGLAL 60

Query: 61  AVTLVGLAVATPVFVIFSPVLVPAILTIGLAVLAFLTSGAFGLTALSSLTWAFNYVRRAM 120
           A TL+GLAV TP+F++FSPV+VPAI+ +GL+V  FLTSGA GLT LSS +W  NY+R+  
Sbjct: 61  AGTLLGLAVTTPLFILFSPVIVPAIIVVGLSVAGFLTSGACGLTGLSSFSWVMNYIRQTH 120

Query: 121 GFMPDQIDQAKRRMQDMAGYVGQKTKDLGQEIQSRTTTTTAAQEQGRRT 165
           G +P+Q++ AK RM D+AGYVGQKTKD+GQ+ +          +  +RT
Sbjct: 121 GSVPEQLEMAKHRMADVAGYVGQKTKDVGQKTKEVGQEIQTKAQDSKRT 169

[Close]

BLAST of Carg15611-RA vs. ExPASy Swiss-Prot
Match: Q647G4 (Oleosin Ara h 10.0102 (Fragment) OS=Arachis hypogaea OX=3818 PE=1 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 8.2e-37
Identity = 85/150 (56.67%), Postives = 110/150 (73.33%), Query Frame = 0


Query: 1   MADRPQPHQIQVHPQR-RYDDVGA----KGRTGPSTSTILAIITLVPLGGSLLGLAGLTL 60
           M DR QPH +QVH    R+ D  A        GPSTS ++A+IT +P+GG+LL  AGL L
Sbjct: 1   MTDRTQPHAVQVHTTAGRFGDTAAGTNRYADRGPSTSKVIAVITGLPIGGTLLLFAGLAL 60

Query: 61  AVTLVGLAVATPVFVIFSPVLVPAILTIGLAVLAFLTSGAFGLTALSSLTWAFNYVRRAM 120
           A TL+GLAV TP+F++FSPV+VPA + +GL+V  FLTSGA GLT LSS +W  NY+R+  
Sbjct: 61  AGTLLGLAVTTPLFILFSPVIVPATIVVGLSVAGFLTSGACGLTGLSSFSWVMNYIRQTH 120

Query: 121 GFMPDQIDQAKRRMQDMAGYVGQKTKDLGQ 146
           G +P+Q++ AK RM D+AGYVGQKTKD+GQ
Sbjct: 121 GSVPEQLEMAKHRMADVAGYVGQKTKDVGQ 150

[Close]

BLAST of Carg15611-RA vs. ExPASy Swiss-Prot
Match: Q6J1J8 (Oleosin Ara h 14.0103 OS=Arachis hypogaea OX=3818 GN=Ahy_A05g023475 PE=1 SV=1)

HSP 1 Score: 152.9 bits (385), Expect = 3.1e-36
Identity = 89/159 (55.97%), Postives = 114/159 (71.70%), Query Frame = 0


Query: 7   PHQIQVH---------PQRRYDDVGAKGRT-----GPSTSTILAIITLVPLGGSLLGLAG 66
           PHQ+QVH         P+R YD  G   +T     GPSTS I+A++  VP GG+LL L+G
Sbjct: 9   PHQVQVHTPTTQRVDVPRRGYDVSGGGIKTLLPERGPSTSQIIAVLVGVPTGGTLLLLSG 68

Query: 67  LTLAVTLVGLAVATPVFVIFSPVLVPAILTIGLAVLAFLTSGAFGLTALSSLTWAFNYVR 126
           L+L  T++GLA+ATPVF+ FSPV+VPA++TIGLAV   LT+GA GLT L SL+W  N++R
Sbjct: 69  LSLLGTIIGLAIATPVFIFFSPVIVPAVVTIGLAVTGILTAGACGLTGLMSLSWMINFIR 128

Query: 127 RAMG-FMPDQIDQAKRRMQDMAGYVGQKTKDLGQEIQSR 151
           +  G  +PDQ+D  KRRM DMA YVGQKTKD GQEIQ++
Sbjct: 129 QVHGTTVPDQLDSVKRRMADMADYVGQKTKDAGQEIQTK 167

[Close]

BLAST of Carg15611-RA vs. ExPASy Swiss-Prot
Match: Q9AXI0 (Oleosin Ara h 14.0102 OS=Arachis hypogaea OX=3818 PE=1 SV=1)

HSP 1 Score: 151.8 bits (382), Expect = 6.9e-36
Identity = 90/159 (56.60%), Postives = 113/159 (71.07%), Query Frame = 0


Query: 7   PHQIQVHP--------QRRYDDVGAKG------RTGPSTSTILAIITLVPLGGSLLGLAG 66
           PHQ+QVH         QRR  DV   G        GPSTS I+A++  VP GG+LL L+G
Sbjct: 9   PHQVQVHTPTTQRVDVQRRGYDVSGGGVKTFLPDRGPSTSQIIAVLVGVPTGGTLLLLSG 68

Query: 67  LTLAVTLVGLAVATPVFVIFSPVLVPAILTIGLAVLAFLTSGAFGLTALSSLTWAFNYVR 126
           L+L  T++GLA+ATPVF  FSPV+VPA++TIGLAV+  LT+GA GLT L SL+W  N++R
Sbjct: 69  LSLLGTIIGLAIATPVFTFFSPVIVPAVVTIGLAVIGILTAGACGLTGLMSLSWMINFIR 128

Query: 127 RAMG-FMPDQIDQAKRRMQDMAGYVGQKTKDLGQEIQSR 151
           +  G  +PDQ+D AKRRM DMA YVGQKTKD GQEIQ++
Sbjct: 129 QVHGTTVPDQLDSAKRRMADMADYVGQKTKDAGQEIQTK 167

[Close]

BLAST of Carg15611-RA vs. ExPASy TrEMBL
Match: A0A6J1ERN7 (oleosin 18.2 kDa-like OS=Cucurbita moschata OX=3662 GN=LOC111435246 PE=3 SV=1)

HSP 1 Score: 300.8 bits (769), Expect = 3.4e-78
Identity = 164/164 (100.00%), Postives = 164/164 (100.00%), Query Frame = 0


Query: 1   MADRPQPHQIQVHPQRRYDDVGAKGRTGPSTSTILAIITLVPLGGSLLGLAGLTLAVTLV 60
           MADRPQPHQIQVHPQRRYDDVGAKGRTGPSTSTILAIITLVPLGGSLLGLAGLTLAVTLV
Sbjct: 1   MADRPQPHQIQVHPQRRYDDVGAKGRTGPSTSTILAIITLVPLGGSLLGLAGLTLAVTLV 60

Query: 61  GLAVATPVFVIFSPVLVPAILTIGLAVLAFLTSGAFGLTALSSLTWAFNYVRRAMGFMPD 120
           GLAVATPVFVIFSPVLVPAILTIGLAVLAFLTSGAFGLTALSSLTWAFNYVRRAMGFMPD
Sbjct: 61  GLAVATPVFVIFSPVLVPAILTIGLAVLAFLTSGAFGLTALSSLTWAFNYVRRAMGFMPD 120

Query: 121 QIDQAKRRMQDMAGYVGQKTKDLGQEIQSRTTTTTAAQEQGRRT 165
           QIDQAKRRMQDMAGYVGQKTKDLGQEIQSRTTTTTAAQEQGRRT
Sbjct: 121 QIDQAKRRMQDMAGYVGQKTKDLGQEIQSRTTTTTAAQEQGRRT 164

[Close]

BLAST of Carg15611-RA vs. ExPASy TrEMBL
Match: A0A6J1JNR0 (oleosin 18.2 kDa-like OS=Cucurbita maxima OX=3661 GN=LOC111486354 PE=3 SV=1)

HSP 1 Score: 287.3 bits (734), Expect = 3.9e-74
Identity = 160/164 (97.56%), Postives = 160/164 (97.56%), Query Frame = 0


Query: 1   MADRPQPHQIQVHPQRRYDDVGAKGRTGPSTSTILAIITLVPLGGSLLGLAGLTLAVTLV 60
           MADRPQPHQIQVHPQRRYDDVGAKGRTGPSTSTILAIITLVPLGGSLLGLAGLTLAVTLV
Sbjct: 1   MADRPQPHQIQVHPQRRYDDVGAKGRTGPSTSTILAIITLVPLGGSLLGLAGLTLAVTLV 60

Query: 61  GLAVATPVFVIFSPVLVPAILTIGLAVLAFLTSGAFGLTALSSLTWAFNYVRRAMGFMPD 120
           GLAVATPVFVIFSPVLVPAILTIGLAVLAFLTSGA GLTALSSLTWAFNYVRRAMGFMPD
Sbjct: 61  GLAVATPVFVIFSPVLVPAILTIGLAVLAFLTSGACGLTALSSLTWAFNYVRRAMGFMPD 120

Query: 121 QIDQAKRRMQDMAGYVGQKTKDLGQEIQSRTTTTTAAQEQGRRT 165
           QIDQAKRRMQDMAGYVGQKTKDLGQEIQSRTT T  AQEQGRRT
Sbjct: 121 QIDQAKRRMQDMAGYVGQKTKDLGQEIQSRTTPT--AQEQGRRT 162

[Close]

BLAST of Carg15611-RA vs. ExPASy TrEMBL
Match: A0A6J1F5N2 (oleosin 18.2 kDa-like OS=Cucurbita moschata OX=3662 GN=LOC111442340 PE=3 SV=1)

HSP 1 Score: 270.8 bits (691), Expect = 3.8e-69
Identity = 147/164 (89.63%), Postives = 153/164 (93.29%), Query Frame = 0


Query: 1   MADRPQPHQIQVHPQRRYDDVGAKGRTGPSTSTILAIITLVPLGGSLLGLAGLTLAVTLV 60
           MADRPQPHQIQVHPQRRYDDVGAKGR GPS STILA++TLVPLGGSLLGLAGLTLAVTLV
Sbjct: 46  MADRPQPHQIQVHPQRRYDDVGAKGRAGPSASTILAVVTLVPLGGSLLGLAGLTLAVTLV 105

Query: 61  GLAVATPVFVIFSPVLVPAILTIGLAVLAFLTSGAFGLTALSSLTWAFNYVRRAMGFMPD 120
           GLAV  PVF+IFSP+LVPAILTIGLAVLAFLTSGAFGLTALSSLTWAFNY+RRA GFMPD
Sbjct: 106 GLAVFIPVFIIFSPILVPAILTIGLAVLAFLTSGAFGLTALSSLTWAFNYIRRAAGFMPD 165

Query: 121 QIDQAKRRMQDMAGYVGQKTKDLGQEIQSRTTTTTAAQEQGRRT 165
           QIDQAKRRMQDMAGYVGQKTKDLGQEIQSRT      QEQGR+T
Sbjct: 166 QIDQAKRRMQDMAGYVGQKTKDLGQEIQSRT------QEQGRKT 203

[Close]

BLAST of Carg15611-RA vs. ExPASy TrEMBL
Match: A0A6J1J7W6 (oleosin 18.2 kDa-like OS=Cucurbita maxima OX=3661 GN=LOC111482079 PE=3 SV=1)

HSP 1 Score: 269.6 bits (688), Expect = 8.4e-69
Identity = 147/164 (89.63%), Postives = 153/164 (93.29%), Query Frame = 0


Query: 1   MADRPQPHQIQVHPQRRYDDVGAKGRTGPSTSTILAIITLVPLGGSLLGLAGLTLAVTLV 60
           MADRPQPHQIQVHPQRRYDDVGAKGR GPS STILAI+TLVPLGGSLLGLAGLTLAVTLV
Sbjct: 1   MADRPQPHQIQVHPQRRYDDVGAKGRAGPSASTILAIVTLVPLGGSLLGLAGLTLAVTLV 60

Query: 61  GLAVATPVFVIFSPVLVPAILTIGLAVLAFLTSGAFGLTALSSLTWAFNYVRRAMGFMPD 120
           GLAV  PVF+IFSP+LVPAILTIG+AVLAFLTSGAFGLTALSSLTWAFNY+RRA GFMPD
Sbjct: 61  GLAVFIPVFIIFSPILVPAILTIGMAVLAFLTSGAFGLTALSSLTWAFNYLRRAAGFMPD 120

Query: 121 QIDQAKRRMQDMAGYVGQKTKDLGQEIQSRTTTTTAAQEQGRRT 165
           QIDQAKRRMQDMAGYVGQKTKDLGQEIQSRT      QEQGR+T
Sbjct: 121 QIDQAKRRMQDMAGYVGQKTKDLGQEIQSRT------QEQGRKT 158

[Close]

BLAST of Carg15611-RA vs. ExPASy TrEMBL
Match: A0A0A0LCF7 (Oleosin OS=Cucumis sativus OX=3659 GN=Csa_3G838790 PE=3 SV=1)

HSP 1 Score: 269.6 bits (688), Expect = 8.4e-69
Identity = 146/164 (89.02%), Postives = 153/164 (93.29%), Query Frame = 0


Query: 1   MADRPQPHQIQVHPQRRYDDVGAKGRTGPSTSTILAIITLVPLGGSLLGLAGLTLAVTLV 60
           MADRPQPHQ+QVHPQRRYDDVGAKGR GPS STILA++TLVPLGGSLLGLAGLTLA TL 
Sbjct: 1   MADRPQPHQLQVHPQRRYDDVGAKGRGGPSASTILAVVTLVPLGGSLLGLAGLTLAATLF 60

Query: 61  GLAVATPVFVIFSPVLVPAILTIGLAVLAFLTSGAFGLTALSSLTWAFNYVRRAMGFMPD 120
           GLAV+TPVF+IFSP+LVPAILTIGLAVLAFLTSGAFGLTALSSLTWAFNY+RRA GFMPD
Sbjct: 61  GLAVSTPVFIIFSPILVPAILTIGLAVLAFLTSGAFGLTALSSLTWAFNYLRRATGFMPD 120

Query: 121 QIDQAKRRMQDMAGYVGQKTKDLGQEIQSRTTTTTAAQEQGRRT 165
           QIDQAKRRMQDMAGYVGQKTKDLGQEIQSRT      QEQGRRT
Sbjct: 121 QIDQAKRRMQDMAGYVGQKTKDLGQEIQSRT------QEQGRRT 158

[Close]

BLAST of Carg15611-RA vs. TAIR 10
Match: AT3G01570.1 (Oleosin family protein )

HSP 1 Score: 147.1 bits (370), Expect = 1.2e-35
Identity = 82/154 (53.25%), Postives = 116/154 (75.32%), Query Frame = 0


Query: 1   MAD-RPQPHQIQVHPQRRYDDVGAK---GRTGPSTSTILAIITLVPLGGSLLGLAGLTLA 60
           MAD R   HQ+QVHPQR+++  G K    ++GPS++ +LA+   VP+GG+LL +AGLTLA
Sbjct: 1   MADVRTHSHQLQVHPQRQHEG-GIKVLYPQSGPSSTQVLAVFVGVPIGGTLLTIAGLTLA 60

Query: 61  VTLVGLAVATPVFVIFSPVLVPAILTIGLAVLAFLTSGAFGLTALSSLTWAFNYVRRAMG 120
            +++GL +A P+F+IFSPV+VPA   IGLA+  FL SGA GLT LSS++W  NY+RRA  
Sbjct: 61  GSVIGLMLAFPLFLIFSPVIVPAAFVIGLAMTGFLASGAIGLTGLSSMSWVLNYIRRAGQ 120

Query: 121 FMPDQIDQAKRRMQDMAGYVGQKTKDLGQEIQSR 151
            +P+++++AK R+ DMA YVGQ+TKD GQ I+ +
Sbjct: 121 HIPEELEEAKHRLADMAEYVGQRTKDAGQTIEDK 153

[Close]

BLAST of Carg15611-RA vs. TAIR 10
Match: AT3G27660.1 (oleosin 4 )

HSP 1 Score: 134.0 bits (336), Expect = 1.1e-31
Identity = 78/151 (51.66%), Postives = 101/151 (66.89%), Query Frame = 0


Query: 11  QVHPQRRYDDVGAKG-----------RTGPSTSTILAIITLVPLGGSLLGLAGLTLAVTL 70
           +VH     DDVG  G             GPST+ ILA+I  VP+GG+LL LAGLTLA ++
Sbjct: 18  RVHQPNYEDDVGFGGYGGYGAGSDYKSRGPSTNQILALIAGVPIGGTLLTLAGLTLAGSV 77

Query: 71  VGLAVATPVFVIFSPVLVPAILTIGLAVLAFLTSGAFGLTALSSLTWAFNYVRRAMGFMP 130
           +GL V+ P+F++FSPV+VPA LTIGLAV   L SG FGLT LSS++W  NY+R     +P
Sbjct: 78  IGLLVSIPLFLLFSPVIVPAALTIGLAVTGILASGLFGLTGLSSVSWVLNYLRGTSDTVP 137

Query: 131 DQIDQAKRRMQDMAGYVGQKTKDLGQEIQSR 151
           +Q+D AKRRM D  GY G K K++GQ +Q +
Sbjct: 138 EQLDYAKRRMADAVGYAGMKGKEMGQYVQDK 168

[Close]

BLAST of Carg15611-RA vs. TAIR 10
Match: AT5G40420.1 (oleosin 2 )

HSP 1 Score: 129.0 bits (323), Expect = 3.4e-30
Identity = 80/172 (46.51%), Postives = 109/172 (63.37%), Query Frame = 0


Query: 9   QIQVHPQRRYDDVGAKG---RTGPSTSTILAIITLVPLGGSLLGLAGLTLAVTLVGLAVA 68
           Q Q    R Y   G K     +GPS++ +L+++  VP+ GSLL LAGL LA +++GL VA
Sbjct: 26  QGQYEGDRGYGGGGYKSMMPESGPSSTQVLSLLIGVPVVGSLLALAGLLLAGSVIGLMVA 85

Query: 69  TPVFVIFSPVLVPAILTIGLAVLAFLTSGAFGLTALSSLTWAFNYVRRAMGFMPDQIDQA 128
            P+F++FSPV+VPA LTIGLA+  FL SG FGLT LSS++W  NY+R     +P+Q++ A
Sbjct: 86  LPLFLLFSPVIVPAALTIGLAMTGFLASGMFGLTGLSSISWVMNYLRGTRRTVPEQLEYA 145

Query: 129 KRRMQDMAGYVGQKTKDLGQEIQSRT-------------TTTTAAQEQGRRT 165
           KRRM D  GY GQK K++GQ +Q++              TTT   + QGR T
Sbjct: 146 KRRMADAVGYAGQKGKEMGQHVQNKAQDVKQYDISKPHDTTTKGHETQGRTT 197

[Close]

BLAST of Carg15611-RA vs. TAIR 10
Match: AT2G25890.1 (Oleosin family protein )

HSP 1 Score: 96.3 bits (238), Expect = 2.5e-20
Identity = 66/154 (42.86%), Postives = 90/154 (58.44%), Query Frame = 0


Query: 1   MADRPQPHQIQVHPQRRYDDVGAKGRTGPSTSTILAIITLVPLGGSLLGLAGLTLAVTLV 60
           MAD  Q HQ Q  P  R     +   + PST  I+  +T   +G SLL L+GLTL  T++
Sbjct: 1   MADH-QQHQQQQQPIMR-----SLHESSPSTRQIVRFVTAATIGLSLLVLSGLTLTGTVI 60

Query: 61  GLAVATPVFVIFSPVLVPAILTIGLAVLAFLTSGAFGLTALSSLTWAFNYVRRAMGFMPD 120
           GL VATP+ V+FSPVLVPA++TIGL  + FL SG  G+ A ++LTW + YV        D
Sbjct: 61  GLIVATPLMVLFSPVLVPAVITIGLLTMGFLFSGGCGVAAATALTWIYKYVTGKHPMGAD 120

Query: 121 QIDQAKRRMQDMAGYVGQKTKDLGQEIQSRTTTT 155
           ++D A+ R+ + A  +G  T    Q+    TTTT
Sbjct: 121 KVDYARMRIAEKAKELGHYTHSQPQQTHQTTTTT 148

[Close]

BLAST of Carg15611-RA vs. TAIR 10
Match: AT5G51210.1 (oleosin3 )

HSP 1 Score: 75.5 bits (184), Expect = 4.5e-14
Identity = 45/101 (44.55%), Postives = 66/101 (65.35%), Query Frame = 0


Query: 29  PSTSTILAIITLVPLGGSLLGLAGLTLAVTLVGLAVATPVFVIFSPVLVPAILTIGLAVL 88
           P    ++   T V  GGSLL L+GLTLA T++ L VATP+ VIFSPVLVPA++T+ L + 
Sbjct: 22  PKARQMVKAATAVTAGGSLLVLSGLTLAGTVIALTVATPLLVIFSPVLVPAVVTVALIIT 81

Query: 89  AFLTSGAFGLTALSSLTWAFNYVRRAMGFMPDQIDQAKRRM 130
            FL SG FG+ A+++ +W +   R   G   D+I+ A+ ++
Sbjct: 82  GFLASGGFGIAAITAFSWLY---RHMTGSGSDKIENARMKV 119

The following BLAST results are available for this feature:

BLAST of Carg15611-RA vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022928435.1	7.1e-78	100.00	oleosin 18.2 kDa-like [Cucurbita moschata] >KAG6588945.1 Oleosin 5, partial [Cuc...	[more]
XP_023529459.1	8.6e-76	98.19	oleosin 18.2 kDa-like [Cucurbita pepo subsp. pepo]	[more]
XP_022989214.1	8.1e-74	97.56	oleosin 18.2 kDa-like [Cucurbita maxima]	[more]
XP_022935477.1	7.8e-69	89.63	oleosin 18.2 kDa-like [Cucurbita moschata]	[more]
XP_023528638.1	7.8e-69	89.63	oleosin 18.2 kDa-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Carg15611-RA vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P29527	4.3e-38	58.44	Oleosin 18.2 kDa OS=Gossypium hirsutum OX=3635 GN=MATP6-A PE=2 SV=1	[more]
Q647G5	8.2e-37	52.07	Oleosin Ara h 10.0101 OS=Arachis hypogaea OX=3818 GN=Ahy_A06g029932 PE=1 SV=2	[more]
Q647G4	8.2e-37	56.67	Oleosin Ara h 10.0102 (Fragment) OS=Arachis hypogaea OX=3818 PE=1 SV=1	[more]
Q6J1J8	3.1e-36	55.97	Oleosin Ara h 14.0103 OS=Arachis hypogaea OX=3818 GN=Ahy_A05g023475 PE=1 SV=1	[more]
Q9AXI0	6.9e-36	56.60	Oleosin Ara h 14.0102 OS=Arachis hypogaea OX=3818 PE=1 SV=1	[more]

BLAST of Carg15611-RA vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1ERN7	3.4e-78	100.00	oleosin 18.2 kDa-like OS=Cucurbita moschata OX=3662 GN=LOC111435246 PE=3 SV=1	[more]
A0A6J1JNR0	3.9e-74	97.56	oleosin 18.2 kDa-like OS=Cucurbita maxima OX=3661 GN=LOC111486354 PE=3 SV=1	[more]
A0A6J1F5N2	3.8e-69	89.63	oleosin 18.2 kDa-like OS=Cucurbita moschata OX=3662 GN=LOC111442340 PE=3 SV=1	[more]
A0A6J1J7W6	8.4e-69	89.63	oleosin 18.2 kDa-like OS=Cucurbita maxima OX=3661 GN=LOC111482079 PE=3 SV=1	[more]
A0A0A0LCF7	8.4e-69	89.02	Oleosin OS=Cucumis sativus OX=3659 GN=Csa_3G838790 PE=3 SV=1	[more]

BLAST of Carg15611-RA vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G01570.1	1.2e-35	53.25	Oleosin family protein	[more]
AT3G27660.1	1.1e-31	51.66	oleosin 4	[more]
AT5G40420.1	3.4e-30	46.51	oleosin 2	[more]
AT2G25890.1	2.5e-20	42.86	Oleosin family protein	[more]
AT5G51210.1	4.5e-14	44.55	oleosin3	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000136	Oleosin	PFAM	PF01277	Oleosin	coord: 33..143 e-value: 6.4E-42 score: 141.9
IPR000136	Oleosin	PANTHER	PTHR33203	OLEOSIN	coord: 19..161
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 142..164
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..25
None	No IPR available	PANTHER	PTHR33203:SF44	OLEOSIN 5	coord: 19..161

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Carg15611	Carg15611	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg15611-RA:1	Carg15611-RA:1	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg15611-RA:cds	Carg15611-RA:cds	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Carg15611-RA	Carg15611-RA-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0022414	reproductive process
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0012511	monolayer-surrounded lipid storage body