Carg12099-RA (mRNA) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg12099-RA
Type	mRNA
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	U3 small nucleolar RNA-associated protein 14 homolog A
Location	Carg_Chr05: 9920699 .. 9922621 (+)
Sequence length	1435
RNA-Seq Expression	Carg12099-RA
Synteny	Carg12099-RA

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGAAAAGGGAAGAGGCAGCTGCTGAAGAAGCCAAGCTTGCCATCCAGGAGTTCGAATCGCTCTCAAAGCAGCTTAATAATTCTGAGACAGAGAATATAAAGACAGAAACTACTAGTGGTAGAAGAACCTTTGGTGGAATTAAAAAATCTGCTCCAGAACCAAGGAAGAAGACAAAGCCAGAATATTATGGTGATACAGACGATGAAGATGACACTGAGACTCGAGAAGGCGTGGAGGATGCTGGGGATGATAAAAATAGCAGTTTAATTGTTGATGAAAATATTGGTTCTGATATTCTCGGCGCAGACTCGAAAAGGCATCATAGTTCAGTTTTTAAAGTATGAAATGTTTCTTTAAATTCTTAAGTCTGTCTCTGGTACATTTAAATTCTTCTTATTGCTGAATTAGCGTTCTTTTCCTTCTATCTTCTTGCCCAGAGCTTTGATGAAACTGTTAGAGATCCGGGTCCTAAGACGACGTATGAAGTTGCCATTTTTGCATCAGACACATGGAAAAAGGTTGAATGTTTTGTTCTTTCATTGTTTGTTTAATCATCTCCTCTTTGTAGAAACATTTTCTTTTGAGCAAAATGTTTATAAAACTAGTATGTGTTCTATATATGCAGGCAAAAAATCTTGTAAAAAAAGTGGATTCTGCATCCACCGCCACTGCATCTAAACCAGCTTTACAAGGTCAAGTTCCAAAGGTATGACCGTTTTCATCTATCAATTTTGGTGGTGTTATGATTGTTGTATTTGTTTGATGGCATTATATTTCTCCTTGATCTGGTACAGGAAACTGTGCAAGATGTGGATGATCAAAGCGACTCGGACCACGAGCTGATGGTCGAAGGGGTTTTGTCCTCAGCTAATAATGAGGCTTATGAACTTCCATCTCAAGCAGAGTTGATTCACCAAGCTTTTGCTGGAGACAACGTAGAGGAAGAATTTGAGAGGCAAAAAGAGGAAATTCTTAATGAAGAAAATCCTGAACCTGAAAAGCCTGTTCTACTACCTGGATGGGGCCAATGGACTAATGTCCAGAAGAAAAAAGGCTTACCTTCTTGGATGCTGGAAGAACATGACCGTGCAAACAAGAAGAGGCAGGAAGTTCTCAAGAACAGGAAGGATGCAAATCTCAAACATGTTATCATCTCTGAGAAATTGGATAAAAAGGTCAGTTGCTCAGCATTTGTGAAAGTTTCTAATAGATCTACTTCCCATGAACCTTTTGATATTGTCTGTTCTTGTGCATCATTCGTTTTGCCATTTCAATTTGACAGGCTGAGAAACTCTATACAAAGACACTGCCTTTTCCTTATACGGCGAAGGAGGTATTTGAGCAGAGCATCCGTATGCCTATCGGCCCCGACTTCAACCCGACATCTGCAATCGGAGCTCTTAATCGTCCCGAGGTCAGCAACTCATTTTGCATTAAAATTACTGATAGACCCTTCTTTATATTCCTAATAAGAGCTCCTCCTCGACATTCCTTTACACAGGTTGTGAAGAAGTCTGGAGTCATTATAAAACCGATCGAGTTTAAGGAAGTTGATACGCAACGAAAAGTCGAGGAGCACAAACAGAGTGGACAGAAACAAAAGAGAAAAAAAAGTAAAACCAACAATGGAAAATCGGTCAAGAAGATGAAAGCTGGGGCCTAATATCCAGTTGATGTCTACTACACCTTGAAGGACAGCCATGGTTTTTAGAGAGCATTCATGGCTTTCCTTTTGGCGAGGCTCGCTGCAGGCAAAGGTAAGAAGATCTAATTTGTAAAAGGTTTTGATAAATTTTGAAACGAGGCAATCTGATAATAGTGTTAGGCTTTTATTTATGTTCTATTTGTATGATTTTTTGTTCAATACAATTTTGATCTGTATAATTATTATCTTCTTTTTTTATATGAAACGTAGATTG

mRNA sequence

ATGAAGAAAAGGGAAGAGGCAGCTGCTGAAGAAGCCAAGCTTGCCATCCAGGAGTTCGAATCGCTCTCAAAGCAGCTTAATAATTCTGAGACAGAGAATATAAAGACAGAAACTACTAGTGGTAGAAGAACCTTTGGTGGAATTAAAAAATCTGCTCCAGAACCAAGGAAGAAGACAAAGCCAGAATATTATGGTGATACAGACGATGAAGATGACACTGAGACTCGAGAAGGCGTGGAGGATGCTGGGGATGATAAAAATAGCAGTTTAATTGTTGATGAAAATATTGGTTCTGATATTCTCGGCGCAGACTCGAAAAGGCATCATAGTTCAGTTTTTAAAAGCTTTGATGAAACTGTTAGAGATCCGGGTCCTAAGACGACGTATGAAGTTGCCATTTTTGCATCAGACACATGGAAAAAGGCAAAAAATCTTGTAAAAAAAGTGGATTCTGCATCCACCGCCACTGCATCTAAACCAGCTTTACAAGGTCAAGTTCCAAAGGAAACTGTGCAAGATGTGGATGATCAAAGCGACTCGGACCACGAGCTGATGGTCGAAGGGGTTTTGTCCTCAGCTAATAATGAGGCTTATGAACTTCCATCTCAAGCAGAGTTGATTCACCAAGCTTTTGCTGGAGACAACGTAGAGGAAGAATTTGAGAGGCAAAAAGAGGAAATTCTTAATGAAGAAAATCCTGAACCTGAAAAGCCTGTTCTACTACCTGGATGGGGCCAATGGACTAATGTCCAGAAGAAAAAAGGCTTACCTTCTTGGATGCTGGAAGAACATGACCGTGCAAACAAGAAGAGGCAGGAAGTTCTCAAGAACAGGAAGGATGCAAATCTCAAACATGTTATCATCTCTGAGAAATTGGATAAAAAGGCTGAGAAACTCTATACAAAGACACTGCCTTTTCCTTATACGGCGAAGGAGGTATTTGAGCAGAGCATCCGTATGCCTATCGGCCCCGACTTCAACCCGACATCTGCAATCGGAGCTCTTAATCGTCCCGAGGTTGTGAAGAAGTCTGGAGTCATTATAAAACCGATCGAGTTTAAGGAAGTTGATACGCAACGAAAAGTCGAGGAGCACAAACAGAGTGGACAGAAACAAAAGAGAAAAAAAAGTAAAACCAACAATGGAAAATCGGTCAAGAAGATGAAAGCTGGGGCCTAATATCCAGTTGATGTCTACTACACCTTGAAGGACAGCCATGGTTTTTAGAGAGCATTCATGGCTTTCCTTTTGGCGAGGCTCGCTGCAGGCAAAGGTAAGAAGATCTAATTTGTAAAAGGTTTTGATAAATTTTGAAACGAGGCAATCTGATAATAGTGTTAGGCTTTTATTTATGTTCTATTTGTATGATTTTTTGTTCAATACAATTTTGATCTGTATAATTATTATCTTCTTTTTTTATATGAAACGTAGATTG

Coding sequence (CDS)

ATGAAGAAAAGGGAAGAGGCAGCTGCTGAAGAAGCCAAGCTTGCCATCCAGGAGTTCGAATCGCTCTCAAAGCAGCTTAATAATTCTGAGACAGAGAATATAAAGACAGAAACTACTAGTGGTAGAAGAACCTTTGGTGGAATTAAAAAATCTGCTCCAGAACCAAGGAAGAAGACAAAGCCAGAATATTATGGTGATACAGACGATGAAGATGACACTGAGACTCGAGAAGGCGTGGAGGATGCTGGGGATGATAAAAATAGCAGTTTAATTGTTGATGAAAATATTGGTTCTGATATTCTCGGCGCAGACTCGAAAAGGCATCATAGTTCAGTTTTTAAAAGCTTTGATGAAACTGTTAGAGATCCGGGTCCTAAGACGACGTATGAAGTTGCCATTTTTGCATCAGACACATGGAAAAAGGCAAAAAATCTTGTAAAAAAAGTGGATTCTGCATCCACCGCCACTGCATCTAAACCAGCTTTACAAGGTCAAGTTCCAAAGGAAACTGTGCAAGATGTGGATGATCAAAGCGACTCGGACCACGAGCTGATGGTCGAAGGGGTTTTGTCCTCAGCTAATAATGAGGCTTATGAACTTCCATCTCAAGCAGAGTTGATTCACCAAGCTTTTGCTGGAGACAACGTAGAGGAAGAATTTGAGAGGCAAAAAGAGGAAATTCTTAATGAAGAAAATCCTGAACCTGAAAAGCCTGTTCTACTACCTGGATGGGGCCAATGGACTAATGTCCAGAAGAAAAAAGGCTTACCTTCTTGGATGCTGGAAGAACATGACCGTGCAAACAAGAAGAGGCAGGAAGTTCTCAAGAACAGGAAGGATGCAAATCTCAAACATGTTATCATCTCTGAGAAATTGGATAAAAAGGCTGAGAAACTCTATACAAAGACACTGCCTTTTCCTTATACGGCGAAGGAGGTATTTGAGCAGAGCATCCGTATGCCTATCGGCCCCGACTTCAACCCGACATCTGCAATCGGAGCTCTTAATCGTCCCGAGGTTGTGAAGAAGTCTGGAGTCATTATAAAACCGATCGAGTTTAAGGAAGTTGATACGCAACGAAAAGTCGAGGAGCACAAACAGAGTGGACAGAAACAAAAGAGAAAAAAAAGTAAAACCAACAATGGAAAATCGGTCAAGAAGATGAAAGCTGGGGCCTAA

Protein sequence

MKKREEAAAEEAKLAIQEFESLSKQLNNSETENIKTETTSGRRTFGGIKKSAPEPRKKTKPEYYGDTDDEDDTETREGVEDAGDDKNSSLIVDENIGSDILGADSKRHHSSVFKSFDETVRDPGPKTTYEVAIFASDTWKKAKNLVKKVDSASTATASKPALQGQVPKETVQDVDDQSDSDHELMVEGVLSSANNEAYELPSQAELIHQAFAGDNVEEEFERQKEEILNEENPEPEKPVLLPGWGQWTNVQKKKGLPSWMLEEHDRANKKRQEVLKNRKDANLKHVIISEKLDKKAEKLYTKTLPFPYTAKEVFEQSIRMPIGPDFNPTSAIGALNRPEVVKKSGVIIKPIEFKEVDTQRKVEEHKQSGQKQKRKKSKTNNGKSVKKMKAGA

Homology

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BLAST of Carg12099-RA vs. NCBI nr
Match: KAG7030216.1 (U3 small nucleolar RNA-associated protein 14-like A, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 738.0 bits (1904), Expect = 4.1e-209
Identity = 392/392 (100.00%), Postives = 392/392 (100.00%), Query Frame = 0


Query: 1   MKKREEAAAEEAKLAIQEFESLSKQLNNSETENIKTETTSGRRTFGGIKKSAPEPRKKTK 60
           MKKREEAAAEEAKLAIQEFESLSKQLNNSETENIKTETTSGRRTFGGIKKSAPEPRKKTK
Sbjct: 1   MKKREEAAAEEAKLAIQEFESLSKQLNNSETENIKTETTSGRRTFGGIKKSAPEPRKKTK 60

Query: 61  PEYYGDTDDEDDTETREGVEDAGDDKNSSLIVDENIGSDILGADSKRHHSSVFKSFDETV 120
           PEYYGDTDDEDDTETREGVEDAGDDKNSSLIVDENIGSDILGADSKRHHSSVFKSFDETV
Sbjct: 61  PEYYGDTDDEDDTETREGVEDAGDDKNSSLIVDENIGSDILGADSKRHHSSVFKSFDETV 120

Query: 121 RDPGPKTTYEVAIFASDTWKKAKNLVKKVDSASTATASKPALQGQVPKETVQDVDDQSDS 180
           RDPGPKTTYEVAIFASDTWKKAKNLVKKVDSASTATASKPALQGQVPKETVQDVDDQSDS
Sbjct: 121 RDPGPKTTYEVAIFASDTWKKAKNLVKKVDSASTATASKPALQGQVPKETVQDVDDQSDS 180

Query: 181 DHELMVEGVLSSANNEAYELPSQAELIHQAFAGDNVEEEFERQKEEILNEENPEPEKPVL 240
           DHELMVEGVLSSANNEAYELPSQAELIHQAFAGDNVEEEFERQKEEILNEENPEPEKPVL
Sbjct: 181 DHELMVEGVLSSANNEAYELPSQAELIHQAFAGDNVEEEFERQKEEILNEENPEPEKPVL 240

Query: 241 LPGWGQWTNVQKKKGLPSWMLEEHDRANKKRQEVLKNRKDANLKHVIISEKLDKKAEKLY 300
           LPGWGQWTNVQKKKGLPSWMLEEHDRANKKRQEVLKNRKDANLKHVIISEKLDKKAEKLY
Sbjct: 241 LPGWGQWTNVQKKKGLPSWMLEEHDRANKKRQEVLKNRKDANLKHVIISEKLDKKAEKLY 300

Query: 301 TKTLPFPYTAKEVFEQSIRMPIGPDFNPTSAIGALNRPEVVKKSGVIIKPIEFKEVDTQR 360
           TKTLPFPYTAKEVFEQSIRMPIGPDFNPTSAIGALNRPEVVKKSGVIIKPIEFKEVDTQR
Sbjct: 301 TKTLPFPYTAKEVFEQSIRMPIGPDFNPTSAIGALNRPEVVKKSGVIIKPIEFKEVDTQR 360

Query: 361 KVEEHKQSGQKQKRKKSKTNNGKSVKKMKAGA 393
           KVEEHKQSGQKQKRKKSKTNNGKSVKKMKAGA
Sbjct: 361 KVEEHKQSGQKQKRKKSKTNNGKSVKKMKAGA 392

[Close]

BLAST of Carg12099-RA vs. NCBI nr
Match: KAG6593204.1 (hypothetical protein SDJN03_12680, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 731.9 bits (1888), Expect = 3.0e-207
Identity = 388/392 (98.98%), Postives = 390/392 (99.49%), Query Frame = 0


Query: 1   MKKREEAAAEEAKLAIQEFESLSKQLNNSETENIKTETTSGRRTFGGIKKSAPEPRKKTK 60
           MKKREEAAAEEAKLAIQEFESLSKQLNNSETENIKTETTSGRRTFGGIKKSAPEPRKKTK
Sbjct: 511 MKKREEAAAEEAKLAIQEFESLSKQLNNSETENIKTETTSGRRTFGGIKKSAPEPRKKTK 570

Query: 61  PEYYGDTDDEDDTETREGVEDAGDDKNSSLIVDENIGSDILGADSKRHHSSVFKSFDETV 120
           PEYYGDTDDEDDTETREGVEDAGDDKNSSLIVDENIGSDILGADSKRHHSSVFKSFDETV
Sbjct: 571 PEYYGDTDDEDDTETREGVEDAGDDKNSSLIVDENIGSDILGADSKRHHSSVFKSFDETV 630

Query: 121 RDPGPKTTYEVAIFASDTWKKAKNLVKKVDSASTATASKPALQGQVPKETVQDVDDQSDS 180
           RDPGPKTTYEVAIFASDTWKKAKN+ KKVDSASTATASKPALQGQVPKETVQDVDDQSDS
Sbjct: 631 RDPGPKTTYEVAIFASDTWKKAKNIEKKVDSASTATASKPALQGQVPKETVQDVDDQSDS 690

Query: 181 DHELMVEGVLSSANNEAYELPSQAELIHQAFAGDNVEEEFERQKEEILNEENPEPEKPVL 240
           DHELMVEGV SSANN+AYELPSQAELIHQAFAGDNVEEEFERQKEEILNEENPEPEKPVL
Sbjct: 691 DHELMVEGVFSSANNKAYELPSQAELIHQAFAGDNVEEEFERQKEEILNEENPEPEKPVL 750

Query: 241 LPGWGQWTNVQKKKGLPSWMLEEHDRANKKRQEVLKNRKDANLKHVIISEKLDKKAEKLY 300
           LPGWGQWTNVQKKKGLPSWMLEEHDRANKKRQEVLKNRKDANLKHVIISEKLDKKAEKLY
Sbjct: 751 LPGWGQWTNVQKKKGLPSWMLEEHDRANKKRQEVLKNRKDANLKHVIISEKLDKKAEKLY 810

Query: 301 TKTLPFPYTAKEVFEQSIRMPIGPDFNPTSAIGALNRPEVVKKSGVIIKPIEFKEVDTQR 360
           TKTLPFPYTAKEVFEQSIRMPIGPDFNPTSAIGALNRPEVVKKSGVIIKPIEFKEVDTQR
Sbjct: 811 TKTLPFPYTAKEVFEQSIRMPIGPDFNPTSAIGALNRPEVVKKSGVIIKPIEFKEVDTQR 870

Query: 361 KVEEHKQSGQKQKRKKSKTNNGKSVKKMKAGA 393
           KVEEHKQSGQKQKRKKSKTNNGKSVKKMKAGA
Sbjct: 871 KVEEHKQSGQKQKRKKSKTNNGKSVKKMKAGA 902

[Close]

BLAST of Carg12099-RA vs. NCBI nr
Match: XP_023514378.1 (U3 small nucleolar RNA-associated protein 14 homolog A [Cucurbita pepo subsp. pepo])

HSP 1 Score: 729.9 bits (1883), Expect = 1.1e-206
Identity = 386/392 (98.47%), Postives = 389/392 (99.23%), Query Frame = 0


Query: 1   MKKREEAAAEEAKLAIQEFESLSKQLNNSETENIKTETTSGRRTFGGIKKSAPEPRKKTK 60
           MKKREEAAAEEAKLAIQEFESLSKQLNNSETENIKTETTSGRRTFGG+KKSAPEPRKKTK
Sbjct: 510 MKKREEAAAEEAKLAIQEFESLSKQLNNSETENIKTETTSGRRTFGGMKKSAPEPRKKTK 569

Query: 61  PEYYGDTDDEDDTETREGVEDAGDDKNSSLIVDENIGSDILGADSKRHHSSVFKSFDETV 120
           PEYYGDTDDEDDTETREGVEDAGDDKN+SLIVDENIGSDILGADSKRHHSSVFKSFDETV
Sbjct: 570 PEYYGDTDDEDDTETREGVEDAGDDKNTSLIVDENIGSDILGADSKRHHSSVFKSFDETV 629

Query: 121 RDPGPKTTYEVAIFASDTWKKAKNLVKKVDSASTATASKPALQGQVPKETVQDVDDQSDS 180
           RDPGPKTTYEVAIFASDTWKKAKNL KKVDS STATASKPALQGQVPKETVQDVDDQSDS
Sbjct: 630 RDPGPKTTYEVAIFASDTWKKAKNLEKKVDSTSTATASKPALQGQVPKETVQDVDDQSDS 689

Query: 181 DHELMVEGVLSSANNEAYELPSQAELIHQAFAGDNVEEEFERQKEEILNEENPEPEKPVL 240
           DHELMVEGVLSSANNEAYELPSQAELIHQAFAGDNVEEEFERQKEEILNEENPEPEKPVL
Sbjct: 690 DHELMVEGVLSSANNEAYELPSQAELIHQAFAGDNVEEEFERQKEEILNEENPEPEKPVL 749

Query: 241 LPGWGQWTNVQKKKGLPSWMLEEHDRANKKRQEVLKNRKDANLKHVIISEKLDKKAEKLY 300
           LPGWGQWTNVQKKKGLPSWMLEEHDRANKKRQE+LKNRKDANLKHVIISEKLDKKAEKLY
Sbjct: 750 LPGWGQWTNVQKKKGLPSWMLEEHDRANKKRQEILKNRKDANLKHVIISEKLDKKAEKLY 809

Query: 301 TKTLPFPYTAKEVFEQSIRMPIGPDFNPTSAIGALNRPEVVKKSGVIIKPIEFKEVDTQR 360
           TKTLPFPYTAKEVFEQSIRMPIGPDFNPTS IGALNRPEVVKKSGVIIKPIEFKEVDTQR
Sbjct: 810 TKTLPFPYTAKEVFEQSIRMPIGPDFNPTSTIGALNRPEVVKKSGVIIKPIEFKEVDTQR 869

Query: 361 KVEEHKQSGQKQKRKKSKTNNGKSVKKMKAGA 393
           KVEEHKQSGQKQKRKKSKTNNGKSVKKMKAGA
Sbjct: 870 KVEEHKQSGQKQKRKKSKTNNGKSVKKMKAGA 901

[Close]

BLAST of Carg12099-RA vs. NCBI nr
Match: XP_022960057.1 (U3 small nucleolar RNA-associated protein 14 homolog A [Cucurbita moschata])

HSP 1 Score: 723.4 bits (1866), Expect = 1.1e-204
Identity = 383/392 (97.70%), Postives = 387/392 (98.72%), Query Frame = 0


Query: 1   MKKREEAAAEEAKLAIQEFESLSKQLNNSETENIKTETTSGRRTFGGIKKSAPEPRKKTK 60
           MKKREEAAAEEAKLAIQEFE LSKQLNNSETENIKTETTSGRRTFGG+KKSAPEPRKKTK
Sbjct: 511 MKKREEAAAEEAKLAIQEFELLSKQLNNSETENIKTETTSGRRTFGGMKKSAPEPRKKTK 570

Query: 61  PEYYGDTDDEDDTETREGVEDAGDDKNSSLIVDENIGSDILGADSKRHHSSVFKSFDETV 120
           PEYYGDTDDEDDTETREGVEDAGDDKNSSLIVDENIGSDILGADSKRHHSSVFKSFDETV
Sbjct: 571 PEYYGDTDDEDDTETREGVEDAGDDKNSSLIVDENIGSDILGADSKRHHSSVFKSFDETV 630

Query: 121 RDPGPKTTYEVAIFASDTWKKAKNLVKKVDSASTATASKPALQGQVPKETVQDVDDQSDS 180
           RDPGPKTTYEVAIFASDTWKKAKN+ KKVDSASTATASKPALQG VPKETVQDVDDQSDS
Sbjct: 631 RDPGPKTTYEVAIFASDTWKKAKNIEKKVDSASTATASKPALQGPVPKETVQDVDDQSDS 690

Query: 181 DHELMVEGVLSSANNEAYELPSQAELIHQAFAGDNVEEEFERQKEEILNEENPEPEKPVL 240
           DHELMVEGV SSANN+AYELPSQAELIHQAFAGDNVEEEFERQKEEILNEENPEPEKPVL
Sbjct: 691 DHELMVEGVFSSANNKAYELPSQAELIHQAFAGDNVEEEFERQKEEILNEENPEPEKPVL 750

Query: 241 LPGWGQWTNVQKKKGLPSWMLEEHDRANKKRQEVLKNRKDANLKHVIISEKLDKKAEKLY 300
           LPGWGQWTNVQKKKGLPSWMLEEHDRANKKRQEVLKNRKDANLKHVIISEKLDKKAEKLY
Sbjct: 751 LPGWGQWTNVQKKKGLPSWMLEEHDRANKKRQEVLKNRKDANLKHVIISEKLDKKAEKLY 810

Query: 301 TKTLPFPYTAKEVFEQSIRMPIGPDFNPTSAIGALNRPEVVKKSGVIIKPIEFKEVDTQR 360
           TKTLPFPYTAKEVFEQSIRMPIGPDFNPTS IGALNRPEVVKKSGVIIKPIEFKEVDTQR
Sbjct: 811 TKTLPFPYTAKEVFEQSIRMPIGPDFNPTSTIGALNRPEVVKKSGVIIKPIEFKEVDTQR 870

Query: 361 KVEEHKQSGQKQKRKKSKTNNGKSVKKMKAGA 393
           KVEEHKQSGQKQKRK+SKTNNGKSVKKMKAGA
Sbjct: 871 KVEEHKQSGQKQKRKRSKTNNGKSVKKMKAGA 902

[Close]

BLAST of Carg12099-RA vs. NCBI nr
Match: XP_023004450.1 (U3 small nucleolar RNA-associated protein 14 homolog A [Cucurbita maxima])

HSP 1 Score: 721.8 bits (1862), Expect = 3.1e-204
Identity = 384/392 (97.96%), Postives = 386/392 (98.47%), Query Frame = 0


Query: 1   MKKREEAAAEEAKLAIQEFESLSKQLNNSETENIKTETTSGRRTFGGIKKSAPEPRKKTK 60
           MKKREEAAAEEAKLAIQEFE LSKQLNNSETENIKTETTSGRRTFGG+KKSAPEPRKKTK
Sbjct: 515 MKKREEAAAEEAKLAIQEFELLSKQLNNSETENIKTETTSGRRTFGGMKKSAPEPRKKTK 574

Query: 61  PEYYGDTDDEDDTETREGVEDAGDDKNSSLIVDENIGSDILGADSKRHHSSVFKSFDETV 120
           PEYYGDTDDEDDTETREGVEDAGDDKNSSLIVDENIGSDILGADSKRH SSVFKSFDETV
Sbjct: 575 PEYYGDTDDEDDTETREGVEDAGDDKNSSLIVDENIGSDILGADSKRHQSSVFKSFDETV 634

Query: 121 RDPGPKTTYEVAIFASDTWKKAKNLVKKVDSASTATASKPALQGQVPKETVQDVDDQSDS 180
           RDPGPKTTYEVAIFASDTWKKAKNL KKVDS STATASKPALQGQVPKETVQDVDDQ+DS
Sbjct: 635 RDPGPKTTYEVAIFASDTWKKAKNLEKKVDSTSTATASKPALQGQVPKETVQDVDDQNDS 694

Query: 181 DHELMVEGVLSSANNEAYELPSQAELIHQAFAGDNVEEEFERQKEEILNEENPEPEKPVL 240
           DHELMVEGVLSSANNEAYELPSQAELIHQAFAGDNVEEEFERQKEEILNEENPEPEKPVL
Sbjct: 695 DHELMVEGVLSSANNEAYELPSQAELIHQAFAGDNVEEEFERQKEEILNEENPEPEKPVL 754

Query: 241 LPGWGQWTNVQKKKGLPSWMLEEHDRANKKRQEVLKNRKDANLKHVIISEKLDKKAEKLY 300
           LPGWGQWTNVQKKKGLPSWMLEEHDRANKKRQEVLKNRKDANLKHVIISEKLDKKAEKLY
Sbjct: 755 LPGWGQWTNVQKKKGLPSWMLEEHDRANKKRQEVLKNRKDANLKHVIISEKLDKKAEKLY 814

Query: 301 TKTLPFPYTAKEVFEQSIRMPIGPDFNPTSAIGALNRPEVVKKSGVIIKPIEFKEVDTQR 360
           TKTLPFPYT KEVFEQSIRMPIGPDFNPTSAIGALNRPEVVKKSGVIIKPIEFKEVDTQR
Sbjct: 815 TKTLPFPYTTKEVFEQSIRMPIGPDFNPTSAIGALNRPEVVKKSGVIIKPIEFKEVDTQR 874

Query: 361 KVEEHKQSGQKQKRKKSKTNNGKSVKKMKAGA 393
           KVEEHKQSGQKQKRKKSKTNNGKSVKKMKA A
Sbjct: 875 KVEEHKQSGQKQKRKKSKTNNGKSVKKMKAWA 906

[Close]

BLAST of Carg12099-RA vs. ExPASy Swiss-Prot
Match: P87137 (Uncharacterized protein C57A7.06 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPAC57A7.06 PE=1 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 1.1e-18
Identity = 76/258 (29.46%), Postives = 139/258 (53.88%), Query Frame = 0


Query: 103 ADSKRHHSSVFKSFDET---VRDPGPKTTYEVAIFASDTWKKAKNLVKKVDSAST--ATA 162
           A++++   S  ++ +ET   ++ P  +T+    +  + +    KN   K+D  ++     
Sbjct: 681 AEARKKKESPLEATEETNPWLQVPDQRTSSAKKLDKNSSKADKKNHKLKMDKVASLQELV 740

Query: 163 SKPALQGQ-VPKETVQDVDDQSDSDHELMVEGVLSSANNEAYELPSQAELIHQAFAGDNV 222
            +P +Q   + +E   +   +++SD ++ V  +  +    + +   Q EL+ +AFAGD+V
Sbjct: 741 EEPKVQPDLIFEEKAFESASEAESDVDVSVPMLKPTKGRLSIK---QRELVAKAFAGDDV 800

Query: 223 EEEFERQKEEILNEENPEPEKPVLLPGWGQW--TNVQKKKGLPSWMLEEHDRANKKRQEV 282
             EFE+ KE+ + E+ P+ E+   LPGWG W    V+++K  P        +  K     
Sbjct: 801 VAEFEKDKEDWVQEDAPK-EEDHSLPGWGSWGGVGVKQRKTKP--------KVKKIAGLD 860

Query: 283 LKNRKDANLKHVIISEKLDKKAEKLYTKTLPFPYTAKEVFEQSIRMPIGPDFNPTSAIGA 342
              RKD+ LKHVII+EK +KKA KL   ++PFP+ ++E +E+S+ +P+GP++   ++   
Sbjct: 861 PSKRKDSKLKHVIINEKRNKKAAKLTADSVPFPFESREQYERSLNLPMGPEWTTRASHHK 920

Query: 343 LNRPEVVKKSGVIIKPIE 353
              P VV K G +I PI+
Sbjct: 921 AVAPRVVTKRGKVINPIK 926

[Close]

BLAST of Carg12099-RA vs. ExPASy Swiss-Prot
Match: Q3T0Q8 (U3 small nucleolar RNA-associated protein 14 homolog A OS=Bos taurus OX=9913 GN=UTP14A PE=2 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 7.0e-18
Identity = 69/222 (31.08%), Postives = 113/222 (50.90%), Query Frame = 0


Query: 140 KKAKNLVKKVDSASTATASKPALQGQVPKETVQDVDDQSDSDHELMVEGVLSSANNEAYE 199
           K+ K   + +D  +  T   P+++      TVQ+++D+ + D                  
Sbjct: 548 KEKKRKEQMIDLQNLLTTKSPSVKSLAVPTTVQELEDEEERD------------------ 607

Query: 200 LPSQAELIHQAFAGDNVEEEFERQKEEILNEENPEPEKPVLLPGWGQWTNVQKKKGLPSW 259
              Q ++I +AFAGD+V  +F ++K E +    P+ +  + LPGWG+W  +  K   PS 
Sbjct: 608 ---QRQIIKEAFAGDDVIRDFLKEKREAVEASKPK-DLDLTLPGWGEWGGIGLK---PS- 667

Query: 260 MLEEHDRANKKRQEVLK-----NRKDANLKHVIISEKLDKKAEKLYTKTLPFPYTAKEVF 319
                  A K+R+ ++K      RKD NL +VII+EK +  A     + LP P+T  + F
Sbjct: 668 -------AKKRRRFLIKAPEGPPRKDKNLPNVIINEKRNTHAAAHQVQVLPHPFTHHQQF 727

Query: 320 EQSIRMPIGPDFNPTSAIGALNRPEVVKKSGVIIKPIEFKEV 357
           E++I+ P+G  +N   A   L  P+VV K G IIKPI+ ++V
Sbjct: 728 ERTIQTPVGSTWNTQRAFQKLTMPKVVTKPGHIIKPIKAEDV 736

[Close]

BLAST of Carg12099-RA vs. ExPASy Swiss-Prot
Match: Q5TAP6 (U3 small nucleolar RNA-associated protein 14 homolog C OS=Homo sapiens OX=9606 GN=UTP14C PE=1 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 7.0e-18
Identity = 83/265 (31.32%), Postives = 126/265 (47.55%), Query Frame = 0


Query: 122 DPGPKTTYEVAIFASDTWKKAKNL--VKKVDSASTATASKPALQGQVPKETVQDVDD--- 181
           +P P+    + +  S+  +  + L  + K D        +P L+GQ  + T  +  D   
Sbjct: 489 EPAPEEAEPLLLQRSERVQTLEELEELGKEDCFQNKELPRPVLEGQQSERTPNNRPDAPK 548

Query: 182 -----------------QSDSDHELMVEGVLSSANNEAYELPSQAELIHQAFAGDNVEEE 241
                            QS S   L V  ++    +E  E   Q ++I +AFAGD+V  +
Sbjct: 549 EKKEKEQLINLQNFLTTQSPSVRSLAVPTIIEELEDE--EERDQRQMIKEAFAGDDVIRD 608

Query: 242 FERQKEEILNEENPEPEKPVLLPGWGQWTNVQKKKGLPSWMLEEHDRANKKRQEVLK--- 301
           F ++K E +    P+ +  + LPGWG+W  V  K   PS        A K+RQ ++K   
Sbjct: 609 FLKEKREAVEASKPK-DVDLTLPGWGEWGGVGLK---PS--------AKKRRQFLIKAPE 668

Query: 302 --NRKDANLKHVIISEKLDKKAEKLYTKTLPFPYTAKEVFEQSIRMPIGPDFNPTSAIGA 360
              RKD NL +VIISEK +  A     + LP+P+T    FE++I+ PIG  +N   A   
Sbjct: 669 GPPRKDKNLPNVIISEKRNIHAAAHQVQVLPYPFTHHRQFERTIQTPIGSTWNTQRAFQK 728

[Close]

BLAST of Carg12099-RA vs. ExPASy Swiss-Prot
Match: Q640M1 (U3 small nucleolar RNA-associated protein 14 homolog A OS=Mus musculus OX=10090 GN=Utp14a PE=1 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 1.9e-15
Identity = 88/307 (28.66%), Postives = 143/307 (46.58%), Query Frame = 0


Query: 105 SKRHHSSVFKSFDET-VRDPGPKTTYEVAIFASDTWKKAKNL--VKKVDSASTATASKPA 164
           SK+   S  K+ D     +P P+    + +   +  +  + L  + K DS       +P+
Sbjct: 472 SKKQKKSPAKAVDLVWEEEPAPEEDEPLLLQRPERMRTLEELEELGKEDSLPNKERPRPS 531

Query: 165 LQG-QVPKETVQDVDDQSDSDHELMVEGVLSSANNEAYELP--------------SQAEL 224
           ++G QV +        ++  +  + ++ +L++       L                Q ++
Sbjct: 532 VEGEQVRRNPQNHSKGKNKKEQMISLQNLLTTRTPSVTSLALPTTVEELEDEGARDQKQM 591

Query: 225 IHQAFAGDNVEEEFERQKEEILNEENPEPEKPVLLPGWGQWTNVQKKKGLPSWMLEEHDR 284
           I +AFAGD+V +EF ++K E +    P+    + LPGWG+W  +  K   PS        
Sbjct: 592 IKEAFAGDDVIKEFLKEKREAIQANKPK-AVDLTLPGWGEWGGMNLK---PS-------- 651

Query: 285 ANKKRQEVLK-----NRKDANLKHVIISEKLDKKAEKLYTKTLPFPYTAKEVFEQSIRMP 344
           A K+R+ ++K      RKD NL +VIISEK +  A     + LP+P+T  + FE++I+ P
Sbjct: 652 ARKRRRFLIKAPEGPPRKDKNLPNVIISEKRNIHAAAHQVRVLPYPFTHHQQFERTIQNP 711

Query: 345 IGPDFNPTSAIGALNRPEVVKKSGVIIKPIEFKEVD---TQRKVEEHKQSGQKQKRKKSK 386
           IG  +N   A   L  P+VV K G IIKPI  ++VD   + R      QS  KQ  K  K
Sbjct: 712 IGSTWNTQRAFQKLTAPKVVTKPGHIIKPITAEDVDCRSSPRSDVPVMQSNPKQHSKHQK 766

[Close]

BLAST of Carg12099-RA vs. ExPASy Swiss-Prot
Match: Q04500 (U3 small nucleolar RNA-associated protein 14 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=UTP14 PE=1 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 1.4e-13
Identity = 99/390 (25.38%), Postives = 176/390 (45.13%), Query Frame = 0


Query: 1   MKKREEAAAEEAKLAIQEFESLSK-------QLNNSETENIKTETTSGRRTF--GGIK-- 60
           MK  E    E  K  +++  ++         + +  ET     +   GRR +  G ++  
Sbjct: 530 MKNGEAREREANKETLRQLRAVENGDDIKLFESDEEETNGENIQINKGRRIYTPGSLESN 589

Query: 61  KSAPEPRKKTKPEYYGDTDDEDDTETREGVEDAGDDKNS------SLIVDENIGSDILGA 120
           K   E    T+ E     D+    E R   +++G  KN+      ++IV+E    + L  
Sbjct: 590 KDMNELNDHTRKE--NKVDESRSLENRLRAKNSGQSKNARTNAEGAIIVEEESDGEPL-Q 649

Query: 121 DSKRHHSSVFKSFDETVRDPGPKTTYEVAIFASDTWKKAKNLVKKVDSASTATAS----- 180
           D + +        DE  +D  P    E       T KK  + V  +D  S+         
Sbjct: 650 DGQNNQQ------DEEAKDVNPWLANESD--EEHTVKKQSSKVNVIDKDSSKNVKAMNKM 709

Query: 181 KPALQGQVPKETVQDVDDQ-----SDSDHELMVEGVLSSANNEAYE---LPSQAELIHQA 240
           + A   Q  K+  +  DD+     +D    L +      +++E  +   +  Q ++I +A
Sbjct: 710 EKAELKQKKKKKGKSNDDEDLLLTADDSTRLKIVDPYGGSDDEQGDNVFMFKQQDVIAEA 769

Query: 241 FAGDNVEEEFERQKEEILNEENPEPEKPVLLPGWGQWTNVQKKKGLPSWMLEEHDRANKK 300
           FAGD+V  EF+ +K+ ++++E+ + E    LPGWG+W     K              NKK
Sbjct: 770 FAGDDVVAEFQEEKKRVIDDED-DKEVDTTLPGWGEWAGAGSKP------------KNKK 829

Query: 301 RQEVLK--------NRKDANLKHVIISEKLDKKAEKLYTKTLPFPYTAKEVFEQSIRMPI 353
           R+ + K         R+D NL++VII+EK++KK  K  +  +PFP+  +E +E+S+RMPI
Sbjct: 830 RKFIKKVKGVVNKDKRRDKNLQNVIINEKVNKKNLKYQSSAVPFPFENREQYERSLRMPI 889

[Close]

BLAST of Carg12099-RA vs. ExPASy TrEMBL
Match: A0A6J1H6A7 (U3 small nucleolar RNA-associated protein 14 homolog A OS=Cucurbita moschata OX=3662 GN=LOC111460921 PE=4 SV=1)

HSP 1 Score: 723.4 bits (1866), Expect = 5.1e-205
Identity = 383/392 (97.70%), Postives = 387/392 (98.72%), Query Frame = 0


Query: 1   MKKREEAAAEEAKLAIQEFESLSKQLNNSETENIKTETTSGRRTFGGIKKSAPEPRKKTK 60
           MKKREEAAAEEAKLAIQEFE LSKQLNNSETENIKTETTSGRRTFGG+KKSAPEPRKKTK
Sbjct: 511 MKKREEAAAEEAKLAIQEFELLSKQLNNSETENIKTETTSGRRTFGGMKKSAPEPRKKTK 570

Query: 61  PEYYGDTDDEDDTETREGVEDAGDDKNSSLIVDENIGSDILGADSKRHHSSVFKSFDETV 120
           PEYYGDTDDEDDTETREGVEDAGDDKNSSLIVDENIGSDILGADSKRHHSSVFKSFDETV
Sbjct: 571 PEYYGDTDDEDDTETREGVEDAGDDKNSSLIVDENIGSDILGADSKRHHSSVFKSFDETV 630

Query: 121 RDPGPKTTYEVAIFASDTWKKAKNLVKKVDSASTATASKPALQGQVPKETVQDVDDQSDS 180
           RDPGPKTTYEVAIFASDTWKKAKN+ KKVDSASTATASKPALQG VPKETVQDVDDQSDS
Sbjct: 631 RDPGPKTTYEVAIFASDTWKKAKNIEKKVDSASTATASKPALQGPVPKETVQDVDDQSDS 690

Query: 181 DHELMVEGVLSSANNEAYELPSQAELIHQAFAGDNVEEEFERQKEEILNEENPEPEKPVL 240
           DHELMVEGV SSANN+AYELPSQAELIHQAFAGDNVEEEFERQKEEILNEENPEPEKPVL
Sbjct: 691 DHELMVEGVFSSANNKAYELPSQAELIHQAFAGDNVEEEFERQKEEILNEENPEPEKPVL 750

Query: 241 LPGWGQWTNVQKKKGLPSWMLEEHDRANKKRQEVLKNRKDANLKHVIISEKLDKKAEKLY 300
           LPGWGQWTNVQKKKGLPSWMLEEHDRANKKRQEVLKNRKDANLKHVIISEKLDKKAEKLY
Sbjct: 751 LPGWGQWTNVQKKKGLPSWMLEEHDRANKKRQEVLKNRKDANLKHVIISEKLDKKAEKLY 810

Query: 301 TKTLPFPYTAKEVFEQSIRMPIGPDFNPTSAIGALNRPEVVKKSGVIIKPIEFKEVDTQR 360
           TKTLPFPYTAKEVFEQSIRMPIGPDFNPTS IGALNRPEVVKKSGVIIKPIEFKEVDTQR
Sbjct: 811 TKTLPFPYTAKEVFEQSIRMPIGPDFNPTSTIGALNRPEVVKKSGVIIKPIEFKEVDTQR 870

Query: 361 KVEEHKQSGQKQKRKKSKTNNGKSVKKMKAGA 393
           KVEEHKQSGQKQKRK+SKTNNGKSVKKMKAGA
Sbjct: 871 KVEEHKQSGQKQKRKRSKTNNGKSVKKMKAGA 902

[Close]

BLAST of Carg12099-RA vs. ExPASy TrEMBL
Match: A0A6J1KUL6 (U3 small nucleolar RNA-associated protein 14 homolog A OS=Cucurbita maxima OX=3661 GN=LOC111497755 PE=4 SV=1)

HSP 1 Score: 721.8 bits (1862), Expect = 1.5e-204
Identity = 384/392 (97.96%), Postives = 386/392 (98.47%), Query Frame = 0


Query: 1   MKKREEAAAEEAKLAIQEFESLSKQLNNSETENIKTETTSGRRTFGGIKKSAPEPRKKTK 60
           MKKREEAAAEEAKLAIQEFE LSKQLNNSETENIKTETTSGRRTFGG+KKSAPEPRKKTK
Sbjct: 515 MKKREEAAAEEAKLAIQEFELLSKQLNNSETENIKTETTSGRRTFGGMKKSAPEPRKKTK 574

Query: 61  PEYYGDTDDEDDTETREGVEDAGDDKNSSLIVDENIGSDILGADSKRHHSSVFKSFDETV 120
           PEYYGDTDDEDDTETREGVEDAGDDKNSSLIVDENIGSDILGADSKRH SSVFKSFDETV
Sbjct: 575 PEYYGDTDDEDDTETREGVEDAGDDKNSSLIVDENIGSDILGADSKRHQSSVFKSFDETV 634

Query: 121 RDPGPKTTYEVAIFASDTWKKAKNLVKKVDSASTATASKPALQGQVPKETVQDVDDQSDS 180
           RDPGPKTTYEVAIFASDTWKKAKNL KKVDS STATASKPALQGQVPKETVQDVDDQ+DS
Sbjct: 635 RDPGPKTTYEVAIFASDTWKKAKNLEKKVDSTSTATASKPALQGQVPKETVQDVDDQNDS 694

Query: 181 DHELMVEGVLSSANNEAYELPSQAELIHQAFAGDNVEEEFERQKEEILNEENPEPEKPVL 240
           DHELMVEGVLSSANNEAYELPSQAELIHQAFAGDNVEEEFERQKEEILNEENPEPEKPVL
Sbjct: 695 DHELMVEGVLSSANNEAYELPSQAELIHQAFAGDNVEEEFERQKEEILNEENPEPEKPVL 754

Query: 241 LPGWGQWTNVQKKKGLPSWMLEEHDRANKKRQEVLKNRKDANLKHVIISEKLDKKAEKLY 300
           LPGWGQWTNVQKKKGLPSWMLEEHDRANKKRQEVLKNRKDANLKHVIISEKLDKKAEKLY
Sbjct: 755 LPGWGQWTNVQKKKGLPSWMLEEHDRANKKRQEVLKNRKDANLKHVIISEKLDKKAEKLY 814

Query: 301 TKTLPFPYTAKEVFEQSIRMPIGPDFNPTSAIGALNRPEVVKKSGVIIKPIEFKEVDTQR 360
           TKTLPFPYT KEVFEQSIRMPIGPDFNPTSAIGALNRPEVVKKSGVIIKPIEFKEVDTQR
Sbjct: 815 TKTLPFPYTTKEVFEQSIRMPIGPDFNPTSAIGALNRPEVVKKSGVIIKPIEFKEVDTQR 874

Query: 361 KVEEHKQSGQKQKRKKSKTNNGKSVKKMKAGA 393
           KVEEHKQSGQKQKRKKSKTNNGKSVKKMKA A
Sbjct: 875 KVEEHKQSGQKQKRKKSKTNNGKSVKKMKAWA 906

[Close]

BLAST of Carg12099-RA vs. ExPASy TrEMBL
Match: A0A1S3BSV8 (U3 small nucleolar RNA-associated protein 14 homolog A isoform X2 OS=Cucumis melo OX=3656 GN=LOC103492806 PE=4 SV=1)

HSP 1 Score: 615.5 bits (1586), Expect = 1.5e-172
Identity = 330/392 (84.18%), Postives = 353/392 (90.05%), Query Frame = 0


Query: 1   MKKREEAAAEEAKLAIQEFESLSKQLNNSETENIKTETTSGRRTFGGIKKSAPEPRKKTK 60
           MKKREEAAAEEAK+AIQEFESLSKQLNNSETENI TET SGRRTFG +KKSAPEPRKKTK
Sbjct: 511 MKKREEAAAEEAKIAIQEFESLSKQLNNSETENIDTETNSGRRTFGSMKKSAPEPRKKTK 570

Query: 61  PEYYGDTDDEDDTETREGVEDAGDDKNSSLIVDENIGSDILGADSKRHHSSVFKSFDETV 120
            EYYGDTDDEDDTE RE VE  GD+  SSL  D NI SDIL  DSK H +SVFKSFDETV
Sbjct: 571 SEYYGDTDDEDDTEAREAVEYDGDNNKSSLFADANIDSDILCEDSKTHQNSVFKSFDETV 630

Query: 121 RDPGPKTTYEVAIFASDTWKKAKNLVKKVDS-ASTATASKPALQGQVPKETVQDVDDQSD 180
           RDPGPKTT+EVAIFAS TWKKAK+L K+VDS  ST  +SKP LQGQV KET+QDVDDQSD
Sbjct: 631 RDPGPKTTHEVAIFASGTWKKAKDLEKRVDSKPSTIVSSKPELQGQVTKETMQDVDDQSD 690

Query: 181 SDHELMVEGVLSSANNEAYELPSQAELIHQAFAGDNVEEEFERQKEEILNEENPEPEKPV 240
           SD ELMV+GVLSSANNE+YELPSQ++LI QAFAGD+VEEEFE+QKEEILNEENPEPEKPV
Sbjct: 691 SDQELMVDGVLSSANNESYELPSQSDLIRQAFAGDDVEEEFEKQKEEILNEENPEPEKPV 750

Query: 241 LLPGWGQWTNVQKKKGLPSWMLEEHDRANKKRQEVLKNRKDANLKHVIISEKLDKKAEKL 300
           LLPGWGQWT+VQKKKGLPSWML+EH+ ANKKRQE LKNRKDANLKHVIISEK+DKKAEKL
Sbjct: 751 LLPGWGQWTHVQKKKGLPSWMLKEHELANKKRQEALKNRKDANLKHVIISEKVDKKAEKL 810

Query: 301 YTKTLPFPYTAKEVFEQSIRMPIGPDFNPTSAIGALNRPEVVKKSGVIIKPIEFKEVDTQ 360
           YTKTLPFPYT K+VFE SIRMPIGPDFNPTSA+GALNRPEVVKKSGVIIKPIEF+EVDT 
Sbjct: 811 YTKTLPFPYTEKDVFEHSIRMPIGPDFNPTSAVGALNRPEVVKKSGVIIKPIEFEEVDTH 870

Query: 361 RKVEEHKQSGQKQKRKKSKTNNGKSVKKMKAG 392
           +KVEEHKQ GQKQKRK  KTN GKS KKMK G
Sbjct: 871 QKVEEHKQKGQKQKRKNGKTNQGKSAKKMKKG 902

[Close]

BLAST of Carg12099-RA vs. ExPASy TrEMBL
Match: A0A5A7VL94 (U3 small nucleolar RNA-associated protein 14-like protein A isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold138G001790 PE=4 SV=1)

HSP 1 Score: 610.5 bits (1573), Expect = 4.8e-171
Identity = 330/394 (83.76%), Postives = 353/394 (89.59%), Query Frame = 0


Query: 1   MKKREEAAAEEAKLAIQEFESLSKQLNNSETENIKTETTSGRRTFGGIKKSAPEPRKKTK 60
           MKKREEAAAEEAK+AIQEFESLSKQLNNSETENI TET SGRRTFG +KKSAPEPRKKTK
Sbjct: 557 MKKREEAAAEEAKIAIQEFESLSKQLNNSETENIDTETNSGRRTFGSMKKSAPEPRKKTK 616

Query: 61  PEYYGDTDDEDDTETREGVEDAGDDKNSSLIVDENIGSDILGADSKRHHSSVFKSFDETV 120
            EYYGDTDDEDDTE RE VE  GD+  SSL  D NI SDIL  DSK H +SVFKSFDETV
Sbjct: 617 SEYYGDTDDEDDTEAREAVEYDGDNNKSSLFADANIDSDILCEDSKTHQNSVFKSFDETV 676

Query: 121 RDPGPKTTYEVAIFASDTWK--KAKNLVKKVDS-ASTATASKPALQGQVPKETVQDVDDQ 180
           RDPGPKTT+EVAIFAS TWK  KAK+L K+VDS  ST  +SKP LQGQV KET+QDVDDQ
Sbjct: 677 RDPGPKTTHEVAIFASGTWKKVKAKDLEKRVDSKPSTIVSSKPELQGQVTKETMQDVDDQ 736

Query: 181 SDSDHELMVEGVLSSANNEAYELPSQAELIHQAFAGDNVEEEFERQKEEILNEENPEPEK 240
           SDSD ELMV+GVLSSANNE+YELPSQ++LI QAFAGD+VEEEFE+QKEEILNEENPEPEK
Sbjct: 737 SDSDQELMVDGVLSSANNESYELPSQSDLIRQAFAGDDVEEEFEKQKEEILNEENPEPEK 796

Query: 241 PVLLPGWGQWTNVQKKKGLPSWMLEEHDRANKKRQEVLKNRKDANLKHVIISEKLDKKAE 300
           PVLLPGWGQWT+VQKKKGLPSWML+EH+ ANKKRQE LKNRKDANLKHVIISEK+DKKAE
Sbjct: 797 PVLLPGWGQWTHVQKKKGLPSWMLKEHELANKKRQEALKNRKDANLKHVIISEKVDKKAE 856

Query: 301 KLYTKTLPFPYTAKEVFEQSIRMPIGPDFNPTSAIGALNRPEVVKKSGVIIKPIEFKEVD 360
           KLYTKTLPFPYT K+VFE SIRMPIGPDFNPTSA+GALNRPEVVKKSGVIIKPIEF+EVD
Sbjct: 857 KLYTKTLPFPYTEKDVFEHSIRMPIGPDFNPTSAVGALNRPEVVKKSGVIIKPIEFEEVD 916

Query: 361 TQRKVEEHKQSGQKQKRKKSKTNNGKSVKKMKAG 392
           T +KVEEHKQ GQKQKRK  KTN GKS KKMK G
Sbjct: 917 THQKVEEHKQKGQKQKRKNGKTNQGKSAKKMKKG 950

[Close]

BLAST of Carg12099-RA vs. ExPASy TrEMBL
Match: A0A1S3BSJ8 (U3 small nucleolar RNA-associated protein 14 homolog A isoform X1 OS=Cucumis melo OX=3656 GN=LOC103492806 PE=4 SV=1)

HSP 1 Score: 610.5 bits (1573), Expect = 4.8e-171
Identity = 330/394 (83.76%), Postives = 353/394 (89.59%), Query Frame = 0


Query: 1   MKKREEAAAEEAKLAIQEFESLSKQLNNSETENIKTETTSGRRTFGGIKKSAPEPRKKTK 60
           MKKREEAAAEEAK+AIQEFESLSKQLNNSETENI TET SGRRTFG +KKSAPEPRKKTK
Sbjct: 511 MKKREEAAAEEAKIAIQEFESLSKQLNNSETENIDTETNSGRRTFGSMKKSAPEPRKKTK 570

Query: 61  PEYYGDTDDEDDTETREGVEDAGDDKNSSLIVDENIGSDILGADSKRHHSSVFKSFDETV 120
            EYYGDTDDEDDTE RE VE  GD+  SSL  D NI SDIL  DSK H +SVFKSFDETV
Sbjct: 571 SEYYGDTDDEDDTEAREAVEYDGDNNKSSLFADANIDSDILCEDSKTHQNSVFKSFDETV 630

Query: 121 RDPGPKTTYEVAIFASDTWK--KAKNLVKKVDS-ASTATASKPALQGQVPKETVQDVDDQ 180
           RDPGPKTT+EVAIFAS TWK  KAK+L K+VDS  ST  +SKP LQGQV KET+QDVDDQ
Sbjct: 631 RDPGPKTTHEVAIFASGTWKKVKAKDLEKRVDSKPSTIVSSKPELQGQVTKETMQDVDDQ 690

Query: 181 SDSDHELMVEGVLSSANNEAYELPSQAELIHQAFAGDNVEEEFERQKEEILNEENPEPEK 240
           SDSD ELMV+GVLSSANNE+YELPSQ++LI QAFAGD+VEEEFE+QKEEILNEENPEPEK
Sbjct: 691 SDSDQELMVDGVLSSANNESYELPSQSDLIRQAFAGDDVEEEFEKQKEEILNEENPEPEK 750

Query: 241 PVLLPGWGQWTNVQKKKGLPSWMLEEHDRANKKRQEVLKNRKDANLKHVIISEKLDKKAE 300
           PVLLPGWGQWT+VQKKKGLPSWML+EH+ ANKKRQE LKNRKDANLKHVIISEK+DKKAE
Sbjct: 751 PVLLPGWGQWTHVQKKKGLPSWMLKEHELANKKRQEALKNRKDANLKHVIISEKVDKKAE 810

Query: 301 KLYTKTLPFPYTAKEVFEQSIRMPIGPDFNPTSAIGALNRPEVVKKSGVIIKPIEFKEVD 360
           KLYTKTLPFPYT K+VFE SIRMPIGPDFNPTSA+GALNRPEVVKKSGVIIKPIEF+EVD
Sbjct: 811 KLYTKTLPFPYTEKDVFEHSIRMPIGPDFNPTSAVGALNRPEVVKKSGVIIKPIEFEEVD 870

Query: 361 TQRKVEEHKQSGQKQKRKKSKTNNGKSVKKMKAG 392
           T +KVEEHKQ GQKQKRK  KTN GKS KKMK G
Sbjct: 871 THQKVEEHKQKGQKQKRKNGKTNQGKSAKKMKKG 904

[Close]

BLAST of Carg12099-RA vs. TAIR 10
Match: AT4G02400.1 (U3 ribonucleoprotein (Utp) family protein )

HSP 1 Score: 318.2 bits (814), Expect = 9.5e-87
Identity = 196/394 (49.75%), Postives = 266/394 (67.51%), Query Frame = 0


Query: 1   MKKREEAAAEEAKLAIQEFESLSKQLNNSETENIKTETTSGRRTFGGIKK-SAPEPRKKT 60
           MKK+ E A EEAK A  E++ L       E    K+   SGRR FG   K  AP+  KK 
Sbjct: 475 MKKKNEEANEEAKRAFGEYKELEN--FGGEDNPKKSADVSGRRVFGATSKVEAPKESKKD 534

Query: 61  KPEYYGDTDDEDDTETREGVEDAGDDKNSSLIVDENIGSDILGADSKRHHSSVFKSFD-- 120
              +Y ++D ++D    EG+E            + ++G+    A   R+  ++ ++    
Sbjct: 535 SDNFYDNSDSDND---MEGIE------------NNDLGAVGDTASPARNTGAITETEKCC 594

Query: 121 ETVRDPGPKTTYEVAIFASDTWKKAKNLVKKVDSASTATASKPALQGQVPKETVQDVDDQ 180
             V +P  KTT++VA+FAS +WKK K   +  +S        P  +GQ  KE+  +  + 
Sbjct: 595 GDVENPASKTTFDVALFASGSWKKMKG-SQNAESKKAPKTRVPISKGQDKKESRDEESED 654

Query: 181 SDSDHELMVEGVLSSANNEAYELPSQAELIHQAFAGDNVEEEFERQKEEILNEENPEPEK 240
           S+S+ E MV+G+L+SA+ E YE+PSQAELI +AFAGD+V EEFE+ K+E+LN+E PEPEK
Sbjct: 655 SESEAEQMVDGILTSASKETYEIPSQAELIQRAFAGDDVVEEFEKDKQEVLNQEVPEPEK 714

Query: 241 PVLLPGWGQWTNVQKKKGLPSWMLEEHDRANKKRQEVLKNRKDANLKHVIISEKLDKKAE 300
           PVL+PGWGQWTNVQKK+GLPSWM+ EH+ ANKKR+  LK RKD  L++VIISEK+DKKA+
Sbjct: 715 PVLVPGWGQWTNVQKKRGLPSWMVREHEDANKKRKLDLKTRKDYRLRNVIISEKVDKKAD 774

Query: 301 KLYTKTLPFPYTAKEVFEQSIRMPIGPDFNPTSAIGALNRPEVVKKSGVIIKPIEFKEVD 360
           KL+T TLPFPYT+KEVFE S+RMPIGP+FNP + +GALNRPEVVKK+GVIIKP++F+EV+
Sbjct: 775 KLHTTTLPFPYTSKEVFEHSMRMPIGPEFNPATIVGALNRPEVVKKAGVIIKPVKFEEVN 834

Query: 361 TQRKV-EEHKQSGQKQKRKK-SKTNNGKSVKKMK 390
              K  +E+ +S QKQ+ KK SKT+ G+   K K
Sbjct: 835 PNEKADDENPRSHQKQRPKKGSKTSKGQGKNKSK 850

[Close]

BLAST of Carg12099-RA vs. TAIR 10
Match: AT5G08600.1 (U3 ribonucleoprotein (Utp) family protein )

HSP 1 Score: 283.1 bits (723), Expect = 3.4e-76
Identity = 176/385 (45.71%), Postives = 241/385 (62.60%), Query Frame = 0


Query: 1   MKKREEAAAEEAKLAIQEFESLSKQLNNSETENIKTETTSGRRTFGGIKKSAPEPRKKTK 60
           +KK+ E A EE K  I+E E    +   +ET   K+    GRR FG     AP+  +K  
Sbjct: 465 VKKKNEEAKEEGKRDIEELE----KFGGAETSK-KSTNVVGRRVFGA---EAPKESEKES 524

Query: 61  PEYYGDTD----DEDDTETREGVEDAGDDKNSSLIVDENIGSDILGADSKRHHSSVFKSF 120
              + ++D    D +D E     ++A   +N+  I++     DI G              
Sbjct: 525 DNLFDNSDSSDNDMEDNELEAVKDNASPARNTETIMEAEKLDDIAG-------------- 584

Query: 121 DETVRDPGPKTTYEVAIFASDTWKKAKNLVKKVDSASTATASKPALQGQVPKETVQDVDD 180
                +P  KTT++VA++AS +WKK     K  +S   +    P  Q Q  KE+     D
Sbjct: 585 -----NPASKTTFDVALYASGSWKKMTG-CKNAESKKASKTHVPISQSQDKKESSDSESD 644

Query: 181 QSDSDH-----ELMVEGVLSSANNEAYELPSQAELIHQAFAGDNVEEEFERQKEEILNEE 240
            S+SD      E MV+G+L+  + E YE+P QAEL+ +AFAGD+VE +FE+ K+E+LN+E
Sbjct: 645 DSESDDSESEAEQMVDGILTCGSKETYEIPCQAELVSRAFAGDDVEGDFEKDKQEVLNQE 704

Query: 241 NPEPEKPVLLPGWGQWTNVQKKKGLPSWMLEEHDRANKKRQEVLKNRKDANLKHVIISEK 300
            PEPEKPV + GWG WTN Q K+GLPS ++ EH+ A K R++ L+ RKDA+ KHVIISEK
Sbjct: 705 VPEPEKPVQVAGWGHWTNNQNKRGLPSRIVREHEEAKKTREQALRKRKDASFKHVIISEK 764

Query: 301 LDKKAEKLYTKTLPFPYTAKEVFEQSIRMPIGPDFNPTSAIGALNRPEVVKKSGVIIKPI 360
           +DKKAEKL TK+LP+PYT+KEVFEQS+RMPIGP+FNPT+ +G LNRPEVVKK+GVIIKP+
Sbjct: 765 VDKKAEKLQTKSLPYPYTSKEVFEQSMRMPIGPEFNPTTIVGVLNRPEVVKKAGVIIKPV 818

Query: 361 EFKEVDTQRKVEEHKQSGQKQKRKK 377
           +F+EV+     +EH +S QKQK KK
Sbjct: 825 KFEEVNPN---DEHPRSHQKQKPKK 818

[Close]

BLAST of Carg12099-RA vs. TAIR 10
Match: AT5G08600.2 (U3 ribonucleoprotein (Utp) family protein )

HSP 1 Score: 283.1 bits (723), Expect = 3.4e-76
Identity = 176/385 (45.71%), Postives = 241/385 (62.60%), Query Frame = 0


Query: 1   MKKREEAAAEEAKLAIQEFESLSKQLNNSETENIKTETTSGRRTFGGIKKSAPEPRKKTK 60
           +KK+ E A EE K  I+E E    +   +ET   K+    GRR FG     AP+  +K  
Sbjct: 478 VKKKNEEAKEEGKRDIEELE----KFGGAETSK-KSTNVVGRRVFGA---EAPKESEKES 537

Query: 61  PEYYGDTD----DEDDTETREGVEDAGDDKNSSLIVDENIGSDILGADSKRHHSSVFKSF 120
              + ++D    D +D E     ++A   +N+  I++     DI G              
Sbjct: 538 DNLFDNSDSSDNDMEDNELEAVKDNASPARNTETIMEAEKLDDIAG-------------- 597

Query: 121 DETVRDPGPKTTYEVAIFASDTWKKAKNLVKKVDSASTATASKPALQGQVPKETVQDVDD 180
                +P  KTT++VA++AS +WKK     K  +S   +    P  Q Q  KE+     D
Sbjct: 598 -----NPASKTTFDVALYASGSWKKMTG-CKNAESKKASKTHVPISQSQDKKESSDSESD 657

Query: 181 QSDSDH-----ELMVEGVLSSANNEAYELPSQAELIHQAFAGDNVEEEFERQKEEILNEE 240
            S+SD      E MV+G+L+  + E YE+P QAEL+ +AFAGD+VE +FE+ K+E+LN+E
Sbjct: 658 DSESDDSESEAEQMVDGILTCGSKETYEIPCQAELVSRAFAGDDVEGDFEKDKQEVLNQE 717

Query: 241 NPEPEKPVLLPGWGQWTNVQKKKGLPSWMLEEHDRANKKRQEVLKNRKDANLKHVIISEK 300
            PEPEKPV + GWG WTN Q K+GLPS ++ EH+ A K R++ L+ RKDA+ KHVIISEK
Sbjct: 718 VPEPEKPVQVAGWGHWTNNQNKRGLPSRIVREHEEAKKTREQALRKRKDASFKHVIISEK 777

Query: 301 LDKKAEKLYTKTLPFPYTAKEVFEQSIRMPIGPDFNPTSAIGALNRPEVVKKSGVIIKPI 360
           +DKKAEKL TK+LP+PYT+KEVFEQS+RMPIGP+FNPT+ +G LNRPEVVKK+GVIIKP+
Sbjct: 778 VDKKAEKLQTKSLPYPYTSKEVFEQSMRMPIGPEFNPTTIVGVLNRPEVVKKAGVIIKPV 831

Query: 361 EFKEVDTQRKVEEHKQSGQKQKRKK 377
           +F+EV+     +EH +S QKQK KK
Sbjct: 838 KFEEVNPN---DEHPRSHQKQKPKK 831

The following BLAST results are available for this feature:

BLAST of Carg12099-RA vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7030216.1	4.1e-209	100.00	U3 small nucleolar RNA-associated protein 14-like A, partial [Cucurbita argyrosp...	[more]
KAG6593204.1	3.0e-207	98.98	hypothetical protein SDJN03_12680, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023514378.1	1.1e-206	98.47	U3 small nucleolar RNA-associated protein 14 homolog A [Cucurbita pepo subsp. pe...	[more]
XP_022960057.1	1.1e-204	97.70	U3 small nucleolar RNA-associated protein 14 homolog A [Cucurbita moschata]	[more]
XP_023004450.1	3.1e-204	97.96	U3 small nucleolar RNA-associated protein 14 homolog A [Cucurbita maxima]	[more]

BLAST of Carg12099-RA vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P87137	1.1e-18	29.46	Uncharacterized protein C57A7.06 OS=Schizosaccharomyces pombe (strain 972 / ATCC...	[more]
Q3T0Q8	7.0e-18	31.08	U3 small nucleolar RNA-associated protein 14 homolog A OS=Bos taurus OX=9913 GN=...	[more]
Q5TAP6	7.0e-18	31.32	U3 small nucleolar RNA-associated protein 14 homolog C OS=Homo sapiens OX=9606 G...	[more]
Q640M1	1.9e-15	28.66	U3 small nucleolar RNA-associated protein 14 homolog A OS=Mus musculus OX=10090 ...	[more]
Q04500	1.4e-13	25.38	U3 small nucleolar RNA-associated protein 14 OS=Saccharomyces cerevisiae (strain...	[more]

BLAST of Carg12099-RA vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H6A7	5.1e-205	97.70	U3 small nucleolar RNA-associated protein 14 homolog A OS=Cucurbita moschata OX=...	[more]
A0A6J1KUL6	1.5e-204	97.96	U3 small nucleolar RNA-associated protein 14 homolog A OS=Cucurbita maxima OX=36...	[more]
A0A1S3BSV8	1.5e-172	84.18	U3 small nucleolar RNA-associated protein 14 homolog A isoform X2 OS=Cucumis mel...	[more]
A0A5A7VL94	4.8e-171	83.76	U3 small nucleolar RNA-associated protein 14-like protein A isoform X1 OS=Cucumi...	[more]
A0A1S3BSJ8	4.8e-171	83.76	U3 small nucleolar RNA-associated protein 14 homolog A isoform X1 OS=Cucumis mel...	[more]

BLAST of Carg12099-RA vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G02400.1	9.5e-87	49.75	U3 ribonucleoprotein (Utp) family protein	[more]
AT5G08600.1	3.4e-76	45.71	U3 ribonucleoprotein (Utp) family protein	[more]
AT5G08600.2	3.4e-76	45.71	U3 ribonucleoprotein (Utp) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 2..32
None	No IPR available	COILS	Coil	Coil	coord: 264..284
None	No IPR available	PFAM	PF04615	Utp14	coord: 1..353 e-value: 4.9E-68 score: 230.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 27..45
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 49..65
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 27..91
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 357..392
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 224..243
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 150..181
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 150..165
IPR006709	Small-subunit processome, Utp14	PANTHER	PTHR14150	U3 SMALL NUCLEOLAR RNA-ASSOCIATED PROTEIN 14	coord: 1..376

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Carg12099	Carg12099	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg12099-RA:1	Carg12099-RA:1	exon
Carg12099-RA:2	Carg12099-RA:2	exon
Carg12099-RA:3	Carg12099-RA:3	exon
Carg12099-RA:4	Carg12099-RA:4	exon
Carg12099-RA:5	Carg12099-RA:5	exon
Carg12099-RA:6	Carg12099-RA:6	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg12099-RA:cds	Carg12099-RA:cds	CDS
Carg12099-RA:cds	Carg12099-RA:cds_2	CDS
Carg12099-RA:cds	Carg12099-RA:cds_3	CDS
Carg12099-RA:cds	Carg12099-RA:cds_4	CDS
Carg12099-RA:cds	Carg12099-RA:cds_5	CDS
Carg12099-RA:cds	Carg12099-RA:cds_6	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg12099-RA:three_prime_utr	Carg12099-RA:three_prime_utr	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Carg12099-RA	Carg12099-RA-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006364	rRNA processing
cellular_component	GO:0032040	small-subunit processome
cellular_component	GO:0005730	nucleolus