CaUC10G197520.1 (mRNA) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC10G197520.1
Type	mRNA
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	Protein NUCLEAR FUSION DEFECTIVE 4-like
Location	Ciama_Chr10: 33084533 .. 33086079 (-)
Sequence length	609
RNA-Seq Expression	CaUC10G197520.1
Synteny	CaUC10G197520.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTTGTGTTCTAAAAGTTGAAAATTTATTTTTATCTTTCATAAATGTTTTTAAAATTATTATTGGAGAAATATTCCTTAAAATAATAATCTGATGACAAATTGGTAATACAAGAACCAATAAACCACATTAAGAGTGTTGGTTGGGTGCTCTGAGATGGATCATTTGAATTGTATCTGTTTGGCTAGACTCAAATTCGTCCAAAGAGGCAATGAAGTTAAGCCTCTTAAGACTATCTCTTTTTGCGAGTGACTGGAACAGATTTGCTCTGCAAACGTGTGTAATATTTGGGCTGATTCTGATTGTTTGAAAATGATGAATGTATTTCTTTGAAGCAACTTTTGTCATTGAGGAAGCTAGGTGCGTTTAAAATTTAATTTCAAATTTATGTAAACTAAACGTTTTATAGTTGTGTACAAAATTTAACCAAACCTATAAAAAGATAATAAATACTTGGATAAGTTAGGAAAAAATACTCTTGCCATACAACTAACTTTATAGTAGGAAAAATTGCAACAAATACAATACGCACGAAGTGTCATCGTTGTGATTGTTCTGCTTTTACTACCTCTAGTTGTCATAATTTTCAAAAAGGAATTGGGCGTTTGGAAGAGTAAAATAGGAAACTCAATTTCACAATTAGCATTAGCATCTCAACAACCACCATCGCCACTGACCTCGGTGATGCCATTGCTACTGCTGAGCTTTTCGTTGGGCTACTGCTTTAAAAATACAATTTTAAACCCCCTAAAAAGTGGAGAGGACTACACAATTCCACAAGTTATTTTCAACATCGATATGATAATTCTTTTCATGACCACAATCTATGGTGTCGATGGAACATTGACGGCGATTGACAATTGGGGTTAAATCGAGGAGTCTTTGGGGTACCCCTCTCACAGTACCAATGCATTCATCTCTCTCATCAACATATGGAACTACCTCGGTCGTGTAGTCTCCGAATTCGTATCAAAATACTTTTGGAAAAAGTACAAAGTCTCATGTCCTCTATTTATCCTCGCGACACTTATTTTGTCTTGCGTTGGCCATTTTCTAATCGCATTAGGAGTTCTGAATTTGCAATATTTTTCTTCAATCATAATTAGGTTCTGCTTTTGTGCGTAGTGGACATTGAACTTAACGAACATATAAAAATTTGTTGGGTTGAAGTACTACACGGCTTTGTATAATTTGGGAGGAACGGCGAGCCCGATTGGGGCGTATATTATGAATGTGATAGTAGCAAGTCCTTTGTACGATAGGGAAGCAGAGCGGAAGATGGATGTGGCTGGGCGACAGAGAAAATAGGGGAGGATTTGAGTTGCTTGAGAGTGGAATGTTACATAATTTAAAGGCATTTTTGATAATCATGGGAGTAACAGTGTTGGCGAGACTTGTTTAGCTAATTTCGATGGTTTGGACATGAAAGTTTTATAAGGGTGATATTTACATGAAGTTCAAGGAGGAGGAAGATGAAGACGTTGAGATCAAAAGCACTACTCCGATCAACAGTGTGTTGACAGTGGTGAAAGTTGAATTTGTTTAG

mRNA sequence

ATGCTTGAAAAATTGCAACAAATACAATACGCACGAAGTGTCATCGTTGTGATTGTTCTGCTTTTACTACCTCTAGTTGTCATAATTTTCAAAAAGGAATTGGGCGTTTGGAAGAGTAAAATAGGAAACTCAATTTCACAATTAGCATTAGCATCTCAACAACCACCATCGCCACTGACCTCGGTGATGCCATTGCTACTGCTGAGCTTTTCGTTGGGCTACTGCTTTAAAAATACAATTTTAAACCCCCTAAAAAGTGGAGAGGACTACACAATTCCACAAGTTATTTTCAACATCGATATGATAATTCTTTTCATGACCACAATCTATGGTGTCGATGGAACATTGACGGCGATTGACAATTGGGGGAAGCAGAGCGGAAGATGGATGTGGCTGGGCGACAGAGAAAATAGGGGAGGATTTGAGTTGCTTGAGAGTGGAATGTTACATAATTTAAAGGCATTTTTGATAATCATGGGAGTAACAGTGTTGGCGAGACTTGGTGATATTTACATGAAGTTCAAGGAGGAGGAAGATGAAGACGTTGAGATCAAAAGCACTACTCCGATCAACAGTGTGTTGACAGTGGTGAAAGTTGAATTTGTTTAG

Coding sequence (CDS)

ATGCTTGAAAAATTGCAACAAATACAATACGCACGAAGTGTCATCGTTGTGATTGTTCTGCTTTTACTACCTCTAGTTGTCATAATTTTCAAAAAGGAATTGGGCGTTTGGAAGAGTAAAATAGGAAACTCAATTTCACAATTAGCATTAGCATCTCAACAACCACCATCGCCACTGACCTCGGTGATGCCATTGCTACTGCTGAGCTTTTCGTTGGGCTACTGCTTTAAAAATACAATTTTAAACCCCCTAAAAAGTGGAGAGGACTACACAATTCCACAAGTTATTTTCAACATCGATATGATAATTCTTTTCATGACCACAATCTATGGTGTCGATGGAACATTGACGGCGATTGACAATTGGGGGAAGCAGAGCGGAAGATGGATGTGGCTGGGCGACAGAGAAAATAGGGGAGGATTTGAGTTGCTTGAGAGTGGAATGTTACATAATTTAAAGGCATTTTTGATAATCATGGGAGTAACAGTGTTGGCGAGACTTGGTGATATTTACATGAAGTTCAAGGAGGAGGAAGATGAAGACGTTGAGATCAAAAGCACTACTCCGATCAACAGTGTGTTGACAGTGGTGAAAGTTGAATTTGTTTAG

Protein sequence

MLEKLQQIQYARSVIVVIVLLLLPLVVIIFKKELGVWKSKIGNSISQLALASQQPPSPLTSVMPLLLLSFSLGYCFKNTILNPLKSGEDYTIPQVIFNIDMIILFMTTIYGVDGTLTAIDNWGKQSGRWMWLGDRENRGGFELLESGMLHNLKAFLIIMGVTVLARLGDIYMKFKEEEDEDVEIKSTTPINSVLTVVKVEFV

Homology

[Close]

BLAST of CaUC10G197520.1 vs. NCBI nr
Match: XP_016899643.1 (PREDICTED: uncharacterized protein LOC103487133 [Cucumis melo])

HSP 1 Score: 146.0 bits (367), Expect = 3.6e-31
Identity = 102/211 (48.34%), Postives = 118/211 (55.92%), Query Frame = 0


Query: 2   LEKLQQIQYARSVIVVIVLLLLPLVVIIFKKELGVWKSKIGNSISQLALASQQPPSPLTS 61
           L + QQIQY  S IVVIVLLLLPL  I+F++EL VWKSKI N I QL LASQQPP PLTS
Sbjct: 240 LLRFQQIQYVGSAIVVIVLLLLPL-AIVFREELSVWKSKIANPILQLELASQQPPPPLTS 299

Query: 62  VMPLLLLSFSLGYCFKNTILNPLKSGEDYTIPQVIFNIDMIILFMTTIYGVDGTLTAIDN 121
            +PL   S     CFKN +  P   GEDYTIPQ IF+IDMIILF+ TI            
Sbjct: 300 TVPLAPSSPPSDSCFKN-MFKPPNRGEDYTIPQAIFSIDMIILFIATI------------ 359

Query: 122 WGKQSGRWMWLGDRENRGGFELLESGMLHNLKAFLIIMGVTVLARL-------------- 181
               + R M    R  + G +L   G+    KAFLII   TV   L              
Sbjct: 360 ----AQRQMEAAGRLRKKGEDLSCLGVECYRKAFLIITAATVFGALVSLILVVRTWKFYK 419

Query: 182 GDIYMKFKEEEDEDVEIKSTTPINSVLTVVK 199
           GDIY +F+ EE ED+E+K   P NS LT  K
Sbjct: 420 GDIYRRFRAEEGEDIEMKMAAPTNSTLTTAK 432

[Close]

BLAST of CaUC10G197520.1 vs. NCBI nr
Match: KAA0043983.1 (protein NUCLEAR FUSION DEFECTIVE 4-like [Cucumis melo var. makuwa] >TYK25157.1 protein NUCLEAR FUSION DEFECTIVE 4-like [Cucumis melo var. makuwa])

HSP 1 Score: 136.3 bits (342), Expect = 2.8e-28
Identity = 81/123 (65.85%), Postives = 90/123 (73.17%), Query Frame = 0


Query: 2   LEKLQQIQYARSVIVVIVLLLLPLVVIIFKKELGVWKSKIGNSISQLALASQQPPSPLTS 61
           L + QQIQY  S IVVIVLLLLPL  I+F++EL VWKSKI N I QL LASQQPP PLTS
Sbjct: 240 LLRFQQIQYVGSAIVVIVLLLLPL-AIVFREELSVWKSKIANPILQLELASQQPPPPLTS 299

Query: 62  VMPLLLLSFSLGYCFKNTILNPLKSGEDYTIPQVIFNIDMIILFMTTIYGVDGTLTAIDN 121
            +PL   S     CFKN +  P   GEDYTIPQ IF+IDMIILF+ TI GV GTLTAIDN
Sbjct: 300 TVPLAPSSPPSDSCFKN-MFKPPNRGEDYTIPQAIFSIDMIILFIATICGVGGTLTAIDN 359

Query: 122 WGK 125
            G+
Sbjct: 360 LGQ 360

[Close]

BLAST of CaUC10G197520.1 vs. NCBI nr
Match: XP_011651970.1 (uncharacterized protein LOC101216551 [Cucumis sativus] >KGN58997.1 hypothetical protein Csa_001993 [Cucumis sativus])

HSP 1 Score: 129.8 bits (325), Expect = 2.7e-26
Identity = 77/123 (62.60%), Postives = 89/123 (72.36%), Query Frame = 0


Query: 2   LEKLQQIQYARSVIVVIVLLLLPLVVIIFKKELGVWKSKIGNSISQLALASQQPPSPLTS 61
           L + QQIQY  S IVVIVLLLLPL  I+F++EL VWKSKI + + QL  ASQQPP PLTS
Sbjct: 240 LLRFQQIQYVGSAIVVIVLLLLPL-TIVFREELSVWKSKIASPVLQLESASQQPPPPLTS 299

Query: 62  VMPLLLLSFSLGYCFKNTILNPLKSGEDYTIPQVIFNIDMIILFMTTIYGVDGTLTAIDN 121
            + L   S     CFKN + NP   GEDYTIPQ IF++D+IILFM TI GV GTLTAIDN
Sbjct: 300 TVSLAPSSPPSESCFKN-MFNPPSRGEDYTIPQAIFSMDLIILFMATICGVGGTLTAIDN 359

Query: 122 WGK 125
            G+
Sbjct: 360 LGQ 360

[Close]

BLAST of CaUC10G197520.1 vs. NCBI nr
Match: XP_038905012.1 (protein NUCLEAR FUSION DEFECTIVE 4-like [Benincasa hispida])

HSP 1 Score: 128.3 bits (321), Expect = 7.7e-26
Identity = 78/121 (64.46%), Postives = 86/121 (71.07%), Query Frame = 0


Query: 4   KLQQIQYARSVIVVIVLLLLPLVVIIFKKELGVWKSKIGNSISQLALASQQPPSPLTSVM 63
           + QQIQY  S IVVIVLLLLPL  I+F++EL VWKSKI N I QL LASQQPP P     
Sbjct: 240 RFQQIQYVGSAIVVIVLLLLPL-AIVFREELNVWKSKIANPILQLELASQQPPRP----P 299

Query: 64  PLLLLSFSLGYCFKNTILNPLKSGEDYTIPQVIFNIDMIILFMTTIYGVDGTLTAIDNWG 123
           PL   S   G CFKNT   P   GEDYTIPQ IF++DMIILF+ TI GV GTLTAIDN G
Sbjct: 300 PLAPPSPPSGSCFKNT-FKPPNRGEDYTIPQAIFSVDMIILFIATICGVGGTLTAIDNLG 354

Query: 124 K 125
           +
Sbjct: 360 Q 354

[Close]

BLAST of CaUC10G197520.1 vs. NCBI nr
Match: KAG6596491.1 (Protein NUCLEAR FUSION DEFECTIVE 4, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 127.9 bits (320), Expect = 1.0e-25
Identity = 74/121 (61.16%), Postives = 88/121 (72.73%), Query Frame = 0


Query: 4   KLQQIQYARSVIVVIVLLLLPLVVIIFKKELGVWKSKIGNSISQLALASQQPPSPLTSVM 63
           K  Q++YA S IVVI LLLLPL  I++++EL VWK+KI + +SQL LASQQ P PLTS  
Sbjct: 240 KFHQMEYAGSAIVVIALLLLPL-AIVYREELSVWKTKIESPLSQLELASQQQPPPLTSAA 299

Query: 64  PLLLLSFSLGYCFKNTILNPLKSGEDYTIPQVIFNIDMIILFMTTIYGVDGTLTAIDNWG 123
           PL   S   G CF+NT   P   GEDYTIPQ +F+IDMIILF+ TI GV GTLTAIDN G
Sbjct: 300 PLAPPSPPSGSCFENT-FKPPNRGEDYTIPQAVFSIDMIILFIATICGVGGTLTAIDNLG 358

Query: 124 K 125
           +
Sbjct: 360 Q 358

[Close]

BLAST of CaUC10G197520.1 vs. ExPASy TrEMBL
Match: A0A1S4DUK0 (uncharacterized protein LOC103487133 OS=Cucumis melo OX=3656 GN=LOC103487133 PE=4 SV=1)

HSP 1 Score: 146.0 bits (367), Expect = 1.7e-31
Identity = 102/211 (48.34%), Postives = 118/211 (55.92%), Query Frame = 0


Query: 2   LEKLQQIQYARSVIVVIVLLLLPLVVIIFKKELGVWKSKIGNSISQLALASQQPPSPLTS 61
           L + QQIQY  S IVVIVLLLLPL  I+F++EL VWKSKI N I QL LASQQPP PLTS
Sbjct: 240 LLRFQQIQYVGSAIVVIVLLLLPL-AIVFREELSVWKSKIANPILQLELASQQPPPPLTS 299

Query: 62  VMPLLLLSFSLGYCFKNTILNPLKSGEDYTIPQVIFNIDMIILFMTTIYGVDGTLTAIDN 121
            +PL   S     CFKN +  P   GEDYTIPQ IF+IDMIILF+ TI            
Sbjct: 300 TVPLAPSSPPSDSCFKN-MFKPPNRGEDYTIPQAIFSIDMIILFIATI------------ 359

Query: 122 WGKQSGRWMWLGDRENRGGFELLESGMLHNLKAFLIIMGVTVLARL-------------- 181
               + R M    R  + G +L   G+    KAFLII   TV   L              
Sbjct: 360 ----AQRQMEAAGRLRKKGEDLSCLGVECYRKAFLIITAATVFGALVSLILVVRTWKFYK 419

Query: 182 GDIYMKFKEEEDEDVEIKSTTPINSVLTVVK 199
           GDIY +F+ EE ED+E+K   P NS LT  K
Sbjct: 420 GDIYRRFRAEEGEDIEMKMAAPTNSTLTTAK 432

[Close]

BLAST of CaUC10G197520.1 vs. ExPASy TrEMBL
Match: A0A5A7TKH4 (Protein NUCLEAR FUSION DEFECTIVE 4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G002830 PE=4 SV=1)

HSP 1 Score: 136.3 bits (342), Expect = 1.4e-28
Identity = 81/123 (65.85%), Postives = 90/123 (73.17%), Query Frame = 0


Query: 2   LEKLQQIQYARSVIVVIVLLLLPLVVIIFKKELGVWKSKIGNSISQLALASQQPPSPLTS 61
           L + QQIQY  S IVVIVLLLLPL  I+F++EL VWKSKI N I QL LASQQPP PLTS
Sbjct: 240 LLRFQQIQYVGSAIVVIVLLLLPL-AIVFREELSVWKSKIANPILQLELASQQPPPPLTS 299

Query: 62  VMPLLLLSFSLGYCFKNTILNPLKSGEDYTIPQVIFNIDMIILFMTTIYGVDGTLTAIDN 121
            +PL   S     CFKN +  P   GEDYTIPQ IF+IDMIILF+ TI GV GTLTAIDN
Sbjct: 300 TVPLAPSSPPSDSCFKN-MFKPPNRGEDYTIPQAIFSIDMIILFIATICGVGGTLTAIDN 359

Query: 122 WGK 125
            G+
Sbjct: 360 LGQ 360

[Close]

BLAST of CaUC10G197520.1 vs. ExPASy TrEMBL
Match: A0A0A0LEA4 (Nodulin-like domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G742600 PE=4 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 1.3e-26
Identity = 77/123 (62.60%), Postives = 89/123 (72.36%), Query Frame = 0


Query: 2   LEKLQQIQYARSVIVVIVLLLLPLVVIIFKKELGVWKSKIGNSISQLALASQQPPSPLTS 61
           L + QQIQY  S IVVIVLLLLPL  I+F++EL VWKSKI + + QL  ASQQPP PLTS
Sbjct: 240 LLRFQQIQYVGSAIVVIVLLLLPL-TIVFREELSVWKSKIASPVLQLESASQQPPPPLTS 299

Query: 62  VMPLLLLSFSLGYCFKNTILNPLKSGEDYTIPQVIFNIDMIILFMTTIYGVDGTLTAIDN 121
            + L   S     CFKN + NP   GEDYTIPQ IF++D+IILFM TI GV GTLTAIDN
Sbjct: 300 TVSLAPSSPPSESCFKN-MFNPPSRGEDYTIPQAIFSMDLIILFMATICGVGGTLTAIDN 359

Query: 122 WGK 125
            G+
Sbjct: 360 LGQ 360

[Close]

BLAST of CaUC10G197520.1 vs. ExPASy TrEMBL
Match: A0A6J1G7M8 (protein NUCLEAR FUSION DEFECTIVE 4-like OS=Cucurbita moschata OX=3662 GN=LOC111451560 PE=4 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 1.1e-25
Identity = 73/121 (60.33%), Postives = 88/121 (72.73%), Query Frame = 0


Query: 4   KLQQIQYARSVIVVIVLLLLPLVVIIFKKELGVWKSKIGNSISQLALASQQPPSPLTSVM 63
           K  Q++YA S IVVI LLLLPL  I++++EL VWK+KI + +SQL LASQQ P PLTS  
Sbjct: 240 KFHQMEYAGSAIVVIALLLLPL-AIVYREELSVWKTKIESPLSQLELASQQQPPPLTSAA 299

Query: 64  PLLLLSFSLGYCFKNTILNPLKSGEDYTIPQVIFNIDMIILFMTTIYGVDGTLTAIDNWG 123
           P+   S   G CF+NT   P   GEDYTIPQ +F+IDMIILF+ TI GV GTLTAIDN G
Sbjct: 300 PVAPPSPPSGSCFENT-FKPPNRGEDYTIPQAVFSIDMIILFIATICGVGGTLTAIDNLG 358

Query: 124 K 125
           +
Sbjct: 360 Q 358

[Close]

BLAST of CaUC10G197520.1 vs. ExPASy TrEMBL
Match: A0A1S4DUI8 (uncharacterized protein LOC103487134 OS=Cucumis melo OX=3656 GN=LOC103487134 PE=4 SV=1)

HSP 1 Score: 125.6 bits (314), Expect = 2.4e-25
Identity = 94/209 (44.98%), Postives = 111/209 (53.11%), Query Frame = 0


Query: 4   KLQQIQYARSVIVVIVLLLLPLVVIIFKKELGVWKSKIGNSISQLALASQQPPSPLTSVM 63
           + QQI Y  S IVVIVLLLLPL  I+F++EL +W+SKI N I QL LASQ PP P  +  
Sbjct: 236 RFQQIHYVGSAIVVIVLLLLPL-AIVFREELRIWRSKIKNPIPQLELASQLPPPPPPNP- 295

Query: 64  PLLLLSFSLGYCFKNTILNPLKSGEDYTIPQVIFNIDMIILFMTTIYGVDGTLTAIDNWG 123
                      CFKN + NP   GEDYTIPQ IF+IDMIILF+ TI              
Sbjct: 296 -------PSDSCFKN-MFNPPNRGEDYTIPQAIFSIDMIILFIATI-------------- 355

Query: 124 KQSGRWMWLGDRENRGGFELLESGMLHNLKAFLIIMGVTVLARL--------------GD 183
               R M    R  + G +L   G+    KAFLII G TVL  L               D
Sbjct: 356 --CERQMEAAGRLRKEGEDLSCLGVECYKKAFLIITGSTVLGGLVSLILVVRTWKFYKDD 415

Query: 184 IYMKFKEEEDEDVEIKSTTPINSVLTVVK 199
           IY +FKE+E ED+EIK   P N+ LT  K
Sbjct: 416 IYRRFKEKEGEDIEIKIAAPTNNSLTAAK 418

[Close]

BLAST of CaUC10G197520.1 vs. TAIR 10
Match: AT2G39210.1 (Major facilitator superfamily protein )

HSP 1 Score: 70.9 bits (172), Expect = 1.4e-12
Identity = 53/138 (38.41%), Postives = 75/138 (54.35%), Query Frame = 0


Query: 2   LEKLQQIQYARSVIVVIVLLLLPLVVIIFKKELGVWKSKIGNSISQLALASQQPPSPLTS 61
           L    Q ++  S  VVIVLLLLP++V+I  +E  +WK K      Q+AL    P + +T 
Sbjct: 239 LSGFTQSEFGGSAAVVIVLLLLPIIVVIL-EEKKLWKEK------QVALNDPAPINVVTE 298

Query: 62  VMPL---------------LLLSFSLGYCFKNTILNPLKSGEDYTIPQVIFNIDMIILFM 121
              L               ++       C+  T+ NP + G+DYTI Q +F++DM+ILF+
Sbjct: 299 KPKLDSSEFKDDDGEESKEVVEKVKTPSCW-TTVFNPPERGDDYTILQALFSVDMLILFL 358

Query: 122 TTIYGVDGTLTAIDNWGK 125
            TI GV GTLTAIDN G+
Sbjct: 359 ATICGVGGTLTAIDNLGQ 368

[Close]

BLAST of CaUC10G197520.1 vs. TAIR 10
Match: AT2G28120.1 (Major facilitator superfamily protein )

HSP 1 Score: 50.1 bits (118), Expect = 2.5e-06
Identity = 42/127 (33.07%), Postives = 62/127 (48.82%), Query Frame = 0


Query: 10  YARSVIVVIVLLLLPLVVIIFKKELGVWKSKIGNSISQLALASQQPPSPLTSVMPLLLLS 69
           YA S  +   LL +PL V + K+EL VW      ++ +L +   + PS +    P   L 
Sbjct: 243 YAASATICCALLFVPLTVSV-KQELEVW------NMMKLPI---EEPSEVKVEKPKKELD 302

Query: 70  FSLGYCFK------------NTILNPLKSGEDYTIPQVIFNIDMIILFMTTIYGVDGTLT 125
                  K            +T+ +P   GEDYTI Q + + DMIILF+ T  G+  +LT
Sbjct: 303 LDQDKAAKVNGEEKETKSCFSTVFSPPPRGEDYTILQALLSTDMIILFVATFCGLGSSLT 359

The following BLAST results are available for this feature:

BLAST of CaUC10G197520.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_016899643.1	3.6e-31	48.34	PREDICTED: uncharacterized protein LOC103487133 [Cucumis melo]	[more]
KAA0043983.1	2.8e-28	65.85	protein NUCLEAR FUSION DEFECTIVE 4-like [Cucumis melo var. makuwa] >TYK25157.1 p...	[more]
XP_011651970.1	2.7e-26	62.60	uncharacterized protein LOC101216551 [Cucumis sativus] >KGN58997.1 hypothetical ...	[more]
XP_038905012.1	7.7e-26	64.46	protein NUCLEAR FUSION DEFECTIVE 4-like [Benincasa hispida]	[more]
KAG6596491.1	1.0e-25	61.16	Protein NUCLEAR FUSION DEFECTIVE 4, partial [Cucurbita argyrosperma subsp. soror...	[more]

BLAST of CaUC10G197520.1 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CaUC10G197520.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S4DUK0	1.7e-31	48.34	uncharacterized protein LOC103487133 OS=Cucumis melo OX=3656 GN=LOC103487133 PE=...	[more]
A0A5A7TKH4	1.4e-28	65.85	Protein NUCLEAR FUSION DEFECTIVE 4-like OS=Cucumis melo var. makuwa OX=1194695 G...	[more]
A0A0A0LEA4	1.3e-26	62.60	Nodulin-like domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G74260...	[more]
A0A6J1G7M8	1.1e-25	60.33	protein NUCLEAR FUSION DEFECTIVE 4-like OS=Cucurbita moschata OX=3662 GN=LOC1114...	[more]
A0A1S4DUI8	2.4e-25	44.98	uncharacterized protein LOC103487134 OS=Cucumis melo OX=3656 GN=LOC103487134 PE=...	[more]

BLAST of CaUC10G197520.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G39210.1	1.4e-12	38.41	Major facilitator superfamily protein	[more]
AT2G28120.1	2.5e-06	33.07	Major facilitator superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR21576:SF122	MFS TRANSPORTER	coord: 5..124
None	No IPR available	PANTHER	PTHR21576	UNCHARACTERIZED NODULIN-LIKE PROTEIN	coord: 5..124

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CaUC10G197520	CaUC10G197520	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CaUC10G197520.1-exon	CaUC10G197520.1-exon-Ciama_Chr10:33084533..33084640	exon
CaUC10G197520.1-exon	CaUC10G197520.1-exon-Ciama_Chr10:33084683..33084816	exon
CaUC10G197520.1-exon	CaUC10G197520.1-exon-Ciama_Chr10:33085214..33085574	exon
CaUC10G197520.1-exon	CaUC10G197520.1-exon-Ciama_Chr10:33086074..33086079	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CaUC10G197520.1-cds	CaUC10G197520.1-cds-Ciama_Chr10:33084533..33084640	CDS
CaUC10G197520.1-cds	CaUC10G197520.1-cds-Ciama_Chr10:33084683..33084816	CDS
CaUC10G197520.1-cds	CaUC10G197520.1-cds-Ciama_Chr10:33085214..33085574	CDS
CaUC10G197520.1-cds	CaUC10G197520.1-cds-Ciama_Chr10:33086074..33086079	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CaUC10G197520.1	CaUC10G197520.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055085	transmembrane transport
cellular_component	GO:0016020	membrane