CaUC07G128570.1 (mRNA) Watermelon (USVL246-FR2) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGTTGCAGTCCTAATGAGCTTAAGTTAGTTTTGTCGACCCACAAAGTGCAATCAGGCAACGGCAGCATTGCTAAAAAATTGACATTACGCCAGGTTGCTTTCTAGTCTCATTTGTGAAGTCAATATGTTCAATTCCCAGCTGTCTAAGAATGCACTCTTTATTGTAACACGATGTCGATTTGTCATTACAAATATAGGCAACCGATGCAAGAGATGCTTTGGCAAAATTTATCTATGCAAGCTTGTTTGACTGGCTTGTAGAACAGATCAATAAGTCACTTAAACCAAGAACGGAGCATTCTGGAAGATCCATAAATATTCTTGACTTCTATGGGTTTGAGTCATTTAAGGCATGTTCTTCACTTATTCTATTCATCTATGTGTATTTTTTTATGCAACGATATGTTATGGTGATTATCTTGATGTCTCCAAATTCAGAAGAATGGCTTTGAACAGTTTTGTATCAATTATGCAAATGAGAGACTGCAGCAGCATTTTATGAGGCACCTGTTCAAACTTCAGCAGGAGGTGAGAGTTTAAAATCACCCGTACTTCTAATTTTGGTCAGATGATTCTGATGCTGTTTGTGTTTAGTATTACCGTAGAGCTGTTTCTAAAGATGAAGAAGGTGACTGACTGTTTTTGCATTCATATGCTCATAGGCTTCTGGAGGCAATTCTTTAAAGAAATGTTTCCGCTTGTTCTCCTCTTAA ATGGGTTGCAGTCCTAATGAGCTTAAGTTAGTTTTGTCGACCCACAAAGTGCAATCAGGCAACGGCAGCATTGCTAAAAAATTGACATTACGCCAGAAGAATGGCTTTGAACAGTTTTGTATCAATTATGCAAATGAGAGACTGCAGCAGCATTTTATGAGGCACCTGTTCAAACTTCAGCAGGAGGCTTCTGGAGGCAATTCTTTAAAGAAATGTTTCCGCTTGTTCTCCTCTTAA ATGGGTTGCAGTCCTAATGAGCTTAAGTTAGTTTTGTCGACCCACAAAGTGCAATCAGGCAACGGCAGCATTGCTAAAAAATTGACATTACGCCAGAAGAATGGCTTTGAACAGTTTTGTATCAATTATGCAAATGAGAGACTGCAGCAGCATTTTATGAGGCACCTGTTCAAACTTCAGCAGGAGGCTTCTGGAGGCAATTCTTTAAAGAAATGTTTCCGCTTGTTCTCCTCTTAA MGCSPNELKLVLSTHKVQSGNGSIAKKLTLRQKNGFEQFCINYANERLQQHFMRHLFKLQQEASGGNSLKKCFRLFSS Homology
BLAST of CaUC07G128570.1 vs. NCBI nr
Match: RLM87777.1 (hypothetical protein C2845_PM04G26520 [Panicum miliaceum]) HSP 1 Score: 99.4 bits (246), Expect = 1.5e-17 Identity = 46/62 (74.19%), Postives = 53/62 (85.48%), Query Frame = 0
BLAST of CaUC07G128570.1 vs. NCBI nr
Match: KAG2637687.1 (hypothetical protein PVAP13_2NG533600 [Panicum virgatum]) HSP 1 Score: 99.4 bits (246), Expect = 1.5e-17 Identity = 46/62 (74.19%), Postives = 53/62 (85.48%), Query Frame = 0
BLAST of CaUC07G128570.1 vs. NCBI nr
Match: XP_038897783.1 (myosin-2 [Benincasa hispida]) HSP 1 Score: 98.6 bits (244), Expect = 2.5e-17 Identity = 60/113 (53.10%), Postives = 60/113 (53.10%), Query Frame = 0
BLAST of CaUC07G128570.1 vs. NCBI nr
Match: XP_008454630.1 (PREDICTED: myosin-2 [Cucumis melo]) HSP 1 Score: 97.8 bits (242), Expect = 4.3e-17 Identity = 58/113 (51.33%), Postives = 60/113 (53.10%), Query Frame = 0
BLAST of CaUC07G128570.1 vs. NCBI nr
Match: PWZ37642.1 (Myosin-1 [Zea mays]) HSP 1 Score: 96.7 bits (239), Expect = 9.6e-17 Identity = 46/62 (74.19%), Postives = 52/62 (83.87%), Query Frame = 0
BLAST of CaUC07G128570.1 vs. ExPASy Swiss-Prot
Match: F4K0A6 (Myosin-2 OS=Arabidopsis thaliana OX=3702 GN=VIII-2 PE=2 SV=1) HSP 1 Score: 73.9 bits (180), Expect = 8.7e-13 Identity = 47/113 (41.59%), Postives = 52/113 (46.02%), Query Frame = 0
BLAST of CaUC07G128570.1 vs. ExPASy Swiss-Prot
Match: F4I507 (Myosin-3 OS=Arabidopsis thaliana OX=3702 GN=VIII-A PE=2 SV=1) HSP 1 Score: 66.2 bits (160), Expect = 1.8e-10 Identity = 43/113 (38.05%), Postives = 50/113 (44.25%), Query Frame = 0
BLAST of CaUC07G128570.1 vs. ExPASy Swiss-Prot
Match: F4JIU4 (Myosin-4 OS=Arabidopsis thaliana OX=3702 GN=VIII-B PE=3 SV=1) HSP 1 Score: 60.8 bits (146), Expect = 7.7e-09 Identity = 27/36 (75.00%), Postives = 30/36 (83.33%), Query Frame = 0
HSP 2 Score: 40.4 bits (93), Expect = 1.1e-02 Identity = 19/32 (59.38%), Postives = 25/32 (78.12%), Query Frame = 0
BLAST of CaUC07G128570.1 vs. ExPASy Swiss-Prot
Match: Q9LHE9 (Myosin-1 OS=Arabidopsis thaliana OX=3702 GN=VIII-1 PE=1 SV=1) HSP 1 Score: 60.5 bits (145), Expect = 1.0e-08 Identity = 27/30 (90.00%), Postives = 28/30 (93.33%), Query Frame = 0
BLAST of CaUC07G128570.1 vs. ExPASy Swiss-Prot
Match: O94477 (Myosin-52 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=myo52 PE=1 SV=1) HSP 1 Score: 56.6 bits (135), Expect = 1.4e-07 Identity = 25/38 (65.79%), Postives = 29/38 (76.32%), Query Frame = 0
BLAST of CaUC07G128570.1 vs. ExPASy TrEMBL
Match: A0A3L6QV91 (Uncharacterized protein OS=Panicum miliaceum OX=4540 GN=C2845_PM04G26520 PE=3 SV=1) HSP 1 Score: 99.4 bits (246), Expect = 7.2e-18 Identity = 46/62 (74.19%), Postives = 53/62 (85.48%), Query Frame = 0
BLAST of CaUC07G128570.1 vs. ExPASy TrEMBL
Match: A0A1S3BYM4 (myosin-2 OS=Cucumis melo OX=3656 GN=LOC103494996 PE=3 SV=1) HSP 1 Score: 97.8 bits (242), Expect = 2.1e-17 Identity = 58/113 (51.33%), Postives = 60/113 (53.10%), Query Frame = 0
BLAST of CaUC07G128570.1 vs. ExPASy TrEMBL
Match: A0A3L6FS26 (Myosin-1 OS=Zea mays OX=4577 GN=VIII-1_1 PE=3 SV=1) HSP 1 Score: 96.7 bits (239), Expect = 4.7e-17 Identity = 46/62 (74.19%), Postives = 52/62 (83.87%), Query Frame = 0
BLAST of CaUC07G128570.1 vs. ExPASy TrEMBL
Match: A0A2Z6MKF8 (Uncharacterized protein OS=Trifolium subterraneum OX=3900 GN=TSUD_101590 PE=3 SV=1) HSP 1 Score: 96.3 bits (238), Expect = 6.1e-17 Identity = 45/62 (72.58%), Postives = 51/62 (82.26%), Query Frame = 0
BLAST of CaUC07G128570.1 vs. ExPASy TrEMBL
Match: M8A728 (Myosin-2 heavy chain OS=Triticum urartu OX=4572 GN=TRIUR3_14912 PE=3 SV=1) HSP 1 Score: 92.8 bits (229), Expect = 6.7e-16 Identity = 43/62 (69.35%), Postives = 52/62 (83.87%), Query Frame = 0
BLAST of CaUC07G128570.1 vs. TAIR 10
Match: AT5G54280.1 (myosin 2 ) HSP 1 Score: 73.9 bits (180), Expect = 6.2e-14 Identity = 47/113 (41.59%), Postives = 52/113 (46.02%), Query Frame = 0
BLAST of CaUC07G128570.1 vs. TAIR 10
Match: AT5G54280.2 (myosin 2 ) HSP 1 Score: 73.9 bits (180), Expect = 6.2e-14 Identity = 47/113 (41.59%), Postives = 52/113 (46.02%), Query Frame = 0
BLAST of CaUC07G128570.1 vs. TAIR 10
Match: AT1G50360.1 (P-loop containing nucleoside triphosphate hydrolases superfamily protein ) HSP 1 Score: 66.2 bits (160), Expect = 1.3e-11 Identity = 43/113 (38.05%), Postives = 50/113 (44.25%), Query Frame = 0
BLAST of CaUC07G128570.1 vs. TAIR 10
Match: AT4G27370.1 (P-loop containing nucleoside triphosphate hydrolases superfamily protein ) HSP 1 Score: 60.8 bits (146), Expect = 5.4e-10 Identity = 27/36 (75.00%), Postives = 30/36 (83.33%), Query Frame = 0
HSP 2 Score: 40.4 bits (93), Expect = 7.6e-04 Identity = 19/32 (59.38%), Postives = 25/32 (78.12%), Query Frame = 0
BLAST of CaUC07G128570.1 vs. TAIR 10
Match: AT3G19960.1 (myosin 1 ) HSP 1 Score: 60.5 bits (145), Expect = 7.1e-10 Identity = 27/30 (90.00%), Postives = 28/30 (93.33%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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