CaUC04G068340.1 (mRNA) Watermelon (USVL246-FR2) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTTGATCCATTCTTTACAACCTTCGCTGATGGTGATGGCAATAACAATTTCAACATTGTCCTTCAAGAACTCTCACGGCTTCTCTTGGATGGCAATCTTTTCATGACCAATATTGTTCCAAGTATCTTCTCATTCGCCAACCTAATATCTTCTGTTTCCTTTCAACATTGTCGATTTCCAAAGAAGAATCTTGATTACGAATTTATTGCGTTTTGGTCTCTTCATTAAATTGCATCCGGAAATTGATCGTGATTTTGGGTAAATTTTGAGAATTGAACAGGTTGGGTCCCTCTGTATTTTAGGGGTGTTCATTATCAATAATGGTTCTAGTTTTAAGAACAGAATTGATTTCGTCAGTTCGAGCGAAGCAAAGACGAGTAATCGAAGAAAAGCGAATCGCAGATATAAAATGAATAAGAACAAATCCCTAAATTGCATTTGGATTAAATTTTCAAACCTTGTCATTCGATATTGTTATACCTGATTCCAGCAGCTATTGCCGCGAGCCTGGCGTCGCCGGAAGTCGCCGGAAGTCGCCGGAAGTGGTCGTTGGTTGCCAGAGATGGTTGTTCAGCTGGCGCTGAAGATTAG ATGTTTGATCCATTCTTTACAACCTTCGCTGATGGTGATGGCAATAACAATTTCAACATTGTCCTTCAAGAACTCTCACGGCTTCTCTTGGATGGCAATCTTTTCATGACCAATATTGTTCCAAGGGTGTTCATTATCAATAATGGTTCTAGTTTTAAGAACAGAATTGATTTCGTCAGTTCGAGCGAAGCAAAGACGACTATTGCCGCGAGCCTGGCGTCGCCGGAAGTCGCCGGAAGTCGCCGGAAGTGGTCGTTGGTTGCCAGAGATGGTTGTTCAGCTGGCGCTGAAGATTAG ATGTTTGATCCATTCTTTACAACCTTCGCTGATGGTGATGGCAATAACAATTTCAACATTGTCCTTCAAGAACTCTCACGGCTTCTCTTGGATGGCAATCTTTTCATGACCAATATTGTTCCAAGGGTGTTCATTATCAATAATGGTTCTAGTTTTAAGAACAGAATTGATTTCGTCAGTTCGAGCGAAGCAAAGACGACTATTGCCGCGAGCCTGGCGTCGCCGGAAGTCGCCGGAAGTCGCCGGAAGTGGTCGTTGGTTGCCAGAGATGGTTGTTCAGCTGGCGCTGAAGATTAG MFDPFFTTFADGDGNNNFNIVLQELSRLLLDGNLFMTNIVPRVFIINNGSSFKNRIDFVSSSEAKTTIAASLASPEVAGSRRKWSLVARDGCSAGAED Homology
BLAST of CaUC04G068340.1 vs. NCBI nr
Match: TYK03001.1 (uncharacterized protein E5676_scaffold46G00960 [Cucumis melo var. makuwa]) HSP 1 Score: 59.3 bits (142), Expect = 2.1e-05 Identity = 30/43 (69.77%), Postives = 36/43 (83.72%), Query Frame = 0
BLAST of CaUC04G068340.1 vs. NCBI nr
Match: XP_023515127.1 (uncharacterized protein LOC111779246 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 55.8 bits (133), Expect = 2.4e-04 Identity = 26/43 (60.47%), Postives = 34/43 (79.07%), Query Frame = 0
BLAST of CaUC04G068340.1 vs. NCBI nr
Match: XP_011658377.1 (uncharacterized protein LOC105435978 [Cucumis sativus] >KAE8646543.1 hypothetical protein Csa_005041 [Cucumis sativus]) HSP 1 Score: 55.1 bits (131), Expect = 4.0e-04 Identity = 28/45 (62.22%), Postives = 36/45 (80.00%), Query Frame = 0
BLAST of CaUC04G068340.1 vs. NCBI nr
Match: XP_022964051.1 (uncharacterized protein LOC111464195 [Cucurbita moschata]) HSP 1 Score: 53.9 bits (128), Expect = 9.0e-04 Identity = 25/43 (58.14%), Postives = 34/43 (79.07%), Query Frame = 0
BLAST of CaUC04G068340.1 vs. NCBI nr
Match: KAG7026010.1 (hypothetical protein SDJN02_12508, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 53.9 bits (128), Expect = 9.0e-04 Identity = 25/43 (58.14%), Postives = 34/43 (79.07%), Query Frame = 0
BLAST of CaUC04G068340.1 vs. ExPASy TrEMBL
Match: A0A5D3BTF3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold46G00960 PE=4 SV=1) HSP 1 Score: 59.3 bits (142), Expect = 1.0e-05 Identity = 30/43 (69.77%), Postives = 36/43 (83.72%), Query Frame = 0
BLAST of CaUC04G068340.1 vs. ExPASy TrEMBL
Match: A0A0A0K7E6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G002880 PE=4 SV=1) HSP 1 Score: 55.5 bits (132), Expect = 1.5e-04 Identity = 31/57 (54.39%), Postives = 43/57 (75.44%), Query Frame = 0
BLAST of CaUC04G068340.1 vs. ExPASy TrEMBL
Match: A0A6J1HHS5 (uncharacterized protein LOC111464195 OS=Cucurbita moschata OX=3662 GN=LOC111464195 PE=4 SV=1) HSP 1 Score: 53.9 bits (128), Expect = 4.3e-04 Identity = 25/43 (58.14%), Postives = 34/43 (79.07%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
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