CaUC01G004820.1 (mRNA) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC01G004820.1
Type	mRNA
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	formin-E isoform X3
Location	Ciama_Chr01: 5135396 .. 5138113 (+)
Sequence length	1071
RNA-Seq Expression	CaUC01G004820.1
Synteny	CaUC01G004820.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTTTGTTCGGTACGGGCCGGCAAGGCTGGTCCCAATTGGCTTGACCGCCTACGTTCCAACAAGGGTTTTCCAATCGTTGATAATCTTGAACTTGATCACTTCCTTACTGACCAAACACTCGATAATCCCTCCTCGTCTTCGCTTCTAGATTCTAAGCCCCATTCCACTCAAGCTGACCCCCACTCGGACTCTGATCCCAATTCTCAATGCCGGGACAACTCCTCCTCCTCCAACTCTCCTGTTGAAAATGAAAACCCATCTTCATATGGAATCATTACTAACATCCTCTCTGACCTCTTCAACATGACGGGTTCCTCTCGTAATTCCAAATGTTCCGGCAAAAAGTACCCTAGGAAACAGTCCAACCCCAAGATTTGCTCTCTTCCTTCTGGTACTAGTGCGGACTATGCGGATGCGAAGAATATGTGTTGTCTGCAGAAAGAAGATAACATCCTCTCATCAAACTCTGATAATAGCTCAAAAGGTTGCTTCGATGTTGGGTCGGATGTAGCACAAAATGTGTGCCTTAAGGTTGTAGAGGAAGAGATGGGAGATGAGAAGTGCGAGAAGGAACTTAAAGGATACTCGAAAAGCGAGGTCACGGTCATAGATACTAGCGATGATGTCTGGAAGTCCGACAAACTGATTTTCAGAAGGAAGAATGTATGGAAGGTCAAGGACAAGAAGGGTAAGTTGAGGAGCTATGGAAGGAAGAAGAGGAAGCAGTCTTTTGAAATGAATGACCTTCCCGATAAGATTGCTTCCACAAGTAAGAAAACCAAAGTCTGGGGTTCAGAGGAGCGCTTTCATTTCAATGAACAGAAAAACCGTGGAAAGGAATCTCTCAAACCATTGAATAAAGTAAGATTAATTATTTTGATACTGTCTTGATTGTACAAGTGCAATTTCTGGCTAGTCTTTTGTTGCTGTTATTTTTTTTAATTGTGAAATGATGGTTGAGTATTGGTCTTTATATAGATGTAATTTGCACCCGTGTAGATCCTTCTGTTACTATTTTCTGCGTATATTTCAGGTGTTTTCTTCCCCTTTATCACTTTTGATGTGCATTCTTAAGAAATGTTGATCTCTTTAAATGGGTCTCTAAAATAATTGCTACTTGACGTTTCCATGTCAACTACCTTGTTTATACCAAACAAAGATGTAAATGTCGAGATGCAGATGTAGATGAAGTCATTGAAGTTTCAATTTCATACATATGCTGATAGTCATAGACTATCTTGTAGATATATGGAAAATCAATCAAAGTCATGGAACTCCTAATGATTATTTGAGTGATTTGGGTTAATAAATAAGCAATTCCTGTTTGTTGAAGAAGTTGTAAATTCTTTTATTAGTATTTATGTTTATATTGGTTATGTTTTTGTTGACATTTTTATAGTAGATTTTGTTTCCTCCTATCCATGTTTGAATACTTTAATTTGTGGAAATATTGAAATGTGGATTGAGATTTTATTTCTGTACCTTAGTATGAAGAATTTTGGTATGTATTATTTCACTTCACAGTTGTGAATGAAACAATAAATTTTGTTAGTCCCTACTTGTCATATTATCATCTCAATTCAAACTGCTTAGTGTTTGTTTGTGGTCAAGTAGTCTCATGACCGTTATCTATGTGTACGATTCTCATGATGCTATTTAATTAATTACATAATTGTATGACATAACGTTGGAGCTGAATCTCTTCTTAGTCATGATTACTATCATTGATGTCATCTTTTAGCTGAGATTCTCGAAGTGGAATAATTGTTGGATTGTGGCAGCCACTATAATTTTATGATGTTCTTAAGGCATTATTTGAAAGAAATATTGTTGCGAGGCAGGAGGAGGCGTATTATTGAGTCAGTTATTTTAAATGCTATCCTAGTTGATTGAAAACACAATGGAGGTGAAATCTAATTTTATATGCACTGTTTTTGCCACTATTGATAAACAAAACTTTTAGAATATAGTGCAAAATACACTTTTGGTCATTCAGGTTTGGAGTAAATGTCTATTTGATCCTTGAAGTTCCAAAATAGGGACTAGAATAGGCACTTCTAGTCCCTGAGATTTGAATAAAAGTTTAAATGGCTCATGAGGTCAGTTGACTGCTAGTTGACTAGCAGAATAGTGAAATGGTCATTACTTGCTGACAAGATTATGATTAGATGGCAAACAATTAATAATTTTATATATTGTTTAATGTGATTGGGACTATAATGTGGCAAAATGGATATCTAAAATTTAAAGCATCTTAAGTCTTAATTAGTTGAGGTATGCTCTTATTGGCATTTTTGAAAAGAAAAAAAAAACTTTGTGCTATGTATTTGTTTTTGTTTAATTCTTTGCCCCTTAAAAGAAAAAAGAATTCAATTGAGAAACAAAAGGGTTCCCTGTAAACAATCTGAGCTCCACACATGCATTTCTTTCTCCTGTTTTTAACTTCCCTCCAGGAATATTATTTAGCATTTTTTCCCTTACCGTTCTAGATTTTGAAACTTCTTGCAGGGACATAATCCTCAGCATTGCTATGGTCCTGAAATTAGAGTAAATGCACCGGATAGTAGTAATGAAAAGAAGGAAAATGTTTACACGCTCTCCCAGAAAAATGTCAGCCATGACACCAAAGAAAATGGTAAGTTTTCTTGGGATTTGCTGTTTTTCAGTTCTACTCAGTCTTGGAATTCTATAGCCGACCTTGAGACAATGCAATGA

mRNA sequence

ATGCTTTGTTCGGTACGGGCCGGCAAGGCTGGTCCCAATTGGCTTGACCGCCTACGTTCCAACAAGGGTTTTCCAATCGTTGATAATCTTGAACTTGATCACTTCCTTACTGACCAAACACTCGATAATCCCTCCTCGTCTTCGCTTCTAGATTCTAAGCCCCATTCCACTCAAGCTGACCCCCACTCGGACTCTGATCCCAATTCTCAATGCCGGGACAACTCCTCCTCCTCCAACTCTCCTGTTGAAAATGAAAACCCATCTTCATATGGAATCATTACTAACATCCTCTCTGACCTCTTCAACATGACGGGTTCCTCTCGTAATTCCAAATGTTCCGGCAAAAAGTACCCTAGGAAACAGTCCAACCCCAAGATTTGCTCTCTTCCTTCTGGTACTAGTGCGGACTATGCGGATGCGAAGAATATGTGTTGTCTGCAGAAAGAAGATAACATCCTCTCATCAAACTCTGATAATAGCTCAAAAGGTTGCTTCGATGTTGGGTCGGATGTAGCACAAAATGTGTGCCTTAAGGTTGTAGAGGAAGAGATGGGAGATGAGAAGTGCGAGAAGGAACTTAAAGGATACTCGAAAAGCGAGGTCACGGTCATAGATACTAGCGATGATGTCTGGAAGTCCGACAAACTGATTTTCAGAAGGAAGAATGTATGGAAGGTCAAGGACAAGAAGGGTAAGTTGAGGAGCTATGGAAGGAAGAAGAGGAAGCAGTCTTTTGAAATGAATGACCTTCCCGATAAGATTGCTTCCACAAGTAAGAAAACCAAAGTCTGGGGTTCAGAGGAGCGCTTTCATTTCAATGAACAGAAAAACCGTGGAAAGGAATCTCTCAAACCATTGAATAAAGGACATAATCCTCAGCATTGCTATGGTCCTGAAATTAGAGTAAATGCACCGGATAGTAGTAATGAAAAGAAGGAAAATGTTTACACGCTCTCCCAGAAAAATGTCAGCCATGACACCAAAGAAAATGGTAAGTTTTCTTGGGATTTGCTGTTTTTCAGTTCTACTCAGTCTTGGAATTCTATAGCCGACCTTGAGACAATGCAATGA

Coding sequence (CDS)

ATGCTTTGTTCGGTACGGGCCGGCAAGGCTGGTCCCAATTGGCTTGACCGCCTACGTTCCAACAAGGGTTTTCCAATCGTTGATAATCTTGAACTTGATCACTTCCTTACTGACCAAACACTCGATAATCCCTCCTCGTCTTCGCTTCTAGATTCTAAGCCCCATTCCACTCAAGCTGACCCCCACTCGGACTCTGATCCCAATTCTCAATGCCGGGACAACTCCTCCTCCTCCAACTCTCCTGTTGAAAATGAAAACCCATCTTCATATGGAATCATTACTAACATCCTCTCTGACCTCTTCAACATGACGGGTTCCTCTCGTAATTCCAAATGTTCCGGCAAAAAGTACCCTAGGAAACAGTCCAACCCCAAGATTTGCTCTCTTCCTTCTGGTACTAGTGCGGACTATGCGGATGCGAAGAATATGTGTTGTCTGCAGAAAGAAGATAACATCCTCTCATCAAACTCTGATAATAGCTCAAAAGGTTGCTTCGATGTTGGGTCGGATGTAGCACAAAATGTGTGCCTTAAGGTTGTAGAGGAAGAGATGGGAGATGAGAAGTGCGAGAAGGAACTTAAAGGATACTCGAAAAGCGAGGTCACGGTCATAGATACTAGCGATGATGTCTGGAAGTCCGACAAACTGATTTTCAGAAGGAAGAATGTATGGAAGGTCAAGGACAAGAAGGGTAAGTTGAGGAGCTATGGAAGGAAGAAGAGGAAGCAGTCTTTTGAAATGAATGACCTTCCCGATAAGATTGCTTCCACAAGTAAGAAAACCAAAGTCTGGGGTTCAGAGGAGCGCTTTCATTTCAATGAACAGAAAAACCGTGGAAAGGAATCTCTCAAACCATTGAATAAAGGACATAATCCTCAGCATTGCTATGGTCCTGAAATTAGAGTAAATGCACCGGATAGTAGTAATGAAAAGAAGGAAAATGTTTACACGCTCTCCCAGAAAAATGTCAGCCATGACACCAAAGAAAATGGTAAGTTTTCTTGGGATTTGCTGTTTTTCAGTTCTACTCAGTCTTGGAATTCTATAGCCGACCTTGAGACAATGCAATGA

Protein sequence

MLCSVRAGKAGPNWLDRLRSNKGFPIVDNLELDHFLTDQTLDNPSSSSLLDSKPHSTQADPHSDSDPNSQCRDNSSSSNSPVENENPSSYGIITNILSDLFNMTGSSRNSKCSGKKYPRKQSNPKICSLPSGTSADYADAKNMCCLQKEDNILSSNSDNSSKGCFDVGSDVAQNVCLKVVEEEMGDEKCEKELKGYSKSEVTVIDTSDDVWKSDKLIFRRKNVWKVKDKKGKLRSYGRKKRKQSFEMNDLPDKIASTSKKTKVWGSEERFHFNEQKNRGKESLKPLNKGHNPQHCYGPEIRVNAPDSSNEKKENVYTLSQKNVSHDTKENGKFSWDLLFFSSTQSWNSIADLETMQ

Homology

[Close]

BLAST of CaUC01G004820.1 vs. NCBI nr
Match: XP_038877116.1 (uncharacterized protein LOC120069436 isoform X1 [Benincasa hispida])

HSP 1 Score: 562.4 bits (1448), Expect = 2.8e-156
Identity = 288/331 (87.01%), Postives = 304/331 (91.84%), Query Frame = 0


Query: 1   MLCSVRAGKAGPNWLDRLRSNKGFPIVDNLELDHFLTDQTLDNPSSSSLLDSKPHSTQAD 60
           MLCSVRAGKAGPNWLDRLRSNKGFPI DNLELDHFLTDQ LDNP  S L DS PHST+ D
Sbjct: 1   MLCSVRAGKAGPNWLDRLRSNKGFPIADNLELDHFLTDQNLDNP--SLLPDSNPHSTRDD 60

Query: 61  PHSDSDPNSQCRDNSSSSNSPVENENPSSYGIITNILSDLFNMTGSSRNSKCSGKKYPRK 120
           PHSDSDPNSQ +DN SSSN+P EN NPSSYGIIT+ILSDLFNMTG+SRNSKCSGKKYPRK
Sbjct: 61  PHSDSDPNSQRQDN-SSSNTPTENGNPSSYGIITDILSDLFNMTGASRNSKCSGKKYPRK 120

Query: 121 QSNPKICSLPSGTSADYADAKNMCCLQKEDNILSSNSDNSSKGCFDVGSDVAQNVCLKVV 180
           QSNPKICSLPS T+ DY D KN+CCLQKEDNILSSNSDNSSKGC D GSD+ QNVCLKVV
Sbjct: 121 QSNPKICSLPSVTNVDYVDVKNLCCLQKEDNILSSNSDNSSKGCIDAGSDIVQNVCLKVV 180

Query: 181 EEEMGDEKCEKELKGYSKSEVTVIDTSDDVWKSDKLIFRRKNVWKVKDKKGKLRSYGRKK 240
           EEE+GDEKCEKELKGYSKSEVTVIDTSDDVWKSDKLIFRRKNVWKVKDKKGKLRSYGRKK
Sbjct: 181 EEEVGDEKCEKELKGYSKSEVTVIDTSDDVWKSDKLIFRRKNVWKVKDKKGKLRSYGRKK 240

Query: 241 RKQSFEMNDLPDKIASTSKKTKVWGSEERFHFNEQKNRGKESLKPLNKGHNPQHCYGPEI 300
           RKQ  EM+DLPD+IAS SKK+KVWGSEERFHFNEQ+ RGKESLKPL KGHNPQ+CYGPEI
Sbjct: 241 RKQFSEMDDLPDRIASASKKSKVWGSEERFHFNEQQIRGKESLKPLKKGHNPQNCYGPEI 300

Query: 301 RVNAPDSSNEKKENVYTLSQKNVSHDTKENG 332
           RVNAPDSSNEKKENVYTLSQK  S++ KENG
Sbjct: 301 RVNAPDSSNEKKENVYTLSQKLGSYNPKENG 328

[Close]

BLAST of CaUC01G004820.1 vs. NCBI nr
Match: XP_038877117.1 (uncharacterized protein LOC120069436 isoform X2 [Benincasa hispida])

HSP 1 Score: 560.1 bits (1442), Expect = 1.4e-155
Identity = 287/330 (86.97%), Postives = 303/330 (91.82%), Query Frame = 0


Query: 1   MLCSVRAGKAGPNWLDRLRSNKGFPIVDNLELDHFLTDQTLDNPSSSSLLDSKPHSTQAD 60
           MLCSVRAGKAGPNWLDRLRSNKGFPI DNLELDHFLTDQ LDNP  S L DS PHST+ D
Sbjct: 1   MLCSVRAGKAGPNWLDRLRSNKGFPIADNLELDHFLTDQNLDNP--SLLPDSNPHSTRDD 60

Query: 61  PHSDSDPNSQCRDNSSSSNSPVENENPSSYGIITNILSDLFNMTGSSRNSKCSGKKYPRK 120
           PHSDSDPNSQ +DN SSSN+P EN NPSSYGIIT+ILSDLFNMTG+SRNSKCSGKKYPRK
Sbjct: 61  PHSDSDPNSQRQDN-SSSNTPTENGNPSSYGIITDILSDLFNMTGASRNSKCSGKKYPRK 120

Query: 121 QSNPKICSLPSGTSADYADAKNMCCLQKEDNILSSNSDNSSKGCFDVGSDVAQNVCLKVV 180
           QSNPKICSLPS T+ DY D KN+CCLQKEDNILSSNSDNSSKGC D GSD+ QNVCLKVV
Sbjct: 121 QSNPKICSLPSVTNVDYVDVKNLCCLQKEDNILSSNSDNSSKGCIDAGSDIVQNVCLKVV 180

Query: 181 EEEMGDEKCEKELKGYSKSEVTVIDTSDDVWKSDKLIFRRKNVWKVKDKKGKLRSYGRKK 240
           EEE+GDEKCEKELKGYSKSEVTVIDTSDDVWKSDKLIFRRKNVWKVKDKKGKLRSYGRKK
Sbjct: 181 EEEVGDEKCEKELKGYSKSEVTVIDTSDDVWKSDKLIFRRKNVWKVKDKKGKLRSYGRKK 240

Query: 241 RKQSFEMNDLPDKIASTSKKTKVWGSEERFHFNEQKNRGKESLKPLNKGHNPQHCYGPEI 300
           RKQ  EM+DLPD+IAS SKK+KVWGSEERFHFNEQ+ RGKESLKPL KGHNPQ+CYGPEI
Sbjct: 241 RKQFSEMDDLPDRIASASKKSKVWGSEERFHFNEQQIRGKESLKPLKKGHNPQNCYGPEI 300

Query: 301 RVNAPDSSNEKKENVYTLSQKNVSHDTKEN 331
           RVNAPDSSNEKKENVYTLSQK  S++ KEN
Sbjct: 301 RVNAPDSSNEKKENVYTLSQKLGSYNPKEN 327

[Close]

BLAST of CaUC01G004820.1 vs. NCBI nr
Match: KAA0043481.1 (uncharacterized protein E6C27_scaffold1167G00200 [Cucumis melo var. makuwa])

HSP 1 Score: 524.2 bits (1349), Expect = 8.5e-145
Identity = 273/328 (83.23%), Postives = 292/328 (89.02%), Query Frame = 0


Query: 1   MLCSVRAGKAGPNWLDRLRSNKGFPIVDNLELDHFLTDQTLDNPSSSSLLDSKPHSTQAD 60
           MLCSVRAGKAGPNWLDRLRSNKGFPI DNLELDHFLTDQ LDNP   SL DS PHST+AD
Sbjct: 1   MLCSVRAGKAGPNWLDRLRSNKGFPITDNLELDHFLTDQNLDNP--CSLSDSNPHSTRAD 60

Query: 61  PHSDSDPNSQCRDNSSSSNSPVENENPSSYGIITNILSDLFNMTGSSRNSKCSGKKYPRK 120
           PHSD++ NSQ +DN SSSNSP+EN NPSS+ IIT+ILSDLFNM G+SRNSKC  KKYPRK
Sbjct: 61  PHSDANLNSQHQDN-SSSNSPIENGNPSSFEIITDILSDLFNMGGASRNSKCCSKKYPRK 120

Query: 121 QSNPKICSLPSGTSADYADAKNMCCLQKEDNILSSNSDNSSKGCFDVGSDVAQNVCLKVV 180
           QSNPKICS+PS  + DYADAKN+CCLQKEDNILSSNSDNSSKGC D GSD+AQNVCLKVV
Sbjct: 121 QSNPKICSIPSIANVDYADAKNLCCLQKEDNILSSNSDNSSKGCTDSGSDMAQNVCLKVV 180

Query: 181 EEEMGDEKCEKELKGYSKSEVTVIDTSDDVWKSDKLIFRRKNVWKVKDKKGKLRSYGRKK 240
           EEE+ DEKCEKELKGYSKSEVTVIDTSDDVWKSDKLIFRRK+VWKVKDKK KLRSYGRKK
Sbjct: 181 EEEVWDEKCEKELKGYSKSEVTVIDTSDDVWKSDKLIFRRKSVWKVKDKKCKLRSYGRKK 240

Query: 241 RKQSFEMNDLPDKIASTSKKTKVWGSEERFHFNEQKNRGKESLKPLNKGHNPQHCYGPEI 300
           RKQS EMNDLPD+I S SKKTKVWGSEERFH N+Q+  GKESLKPLNK HN QHCYGPEI
Sbjct: 241 RKQSSEMNDLPDRIVSASKKTKVWGSEERFHLNKQQIHGKESLKPLNKVHNLQHCYGPEI 300

Query: 301 RVNAPDSSNEKKENVYTLSQKNVSHDTK 329
           R+ APDSSNEKKEN  TLSQKN  +D K
Sbjct: 301 RLTAPDSSNEKKENGCTLSQKNGGYDPK 325

[Close]

BLAST of CaUC01G004820.1 vs. NCBI nr
Match: XP_016898859.1 (PREDICTED: uncharacterized protein LOC103482569 [Cucumis melo] >XP_016898860.1 PREDICTED: uncharacterized protein LOC103482569 [Cucumis melo] >XP_016898861.1 PREDICTED: uncharacterized protein LOC103482569 [Cucumis melo])

HSP 1 Score: 524.2 bits (1349), Expect = 8.5e-145
Identity = 273/328 (83.23%), Postives = 292/328 (89.02%), Query Frame = 0


Query: 1   MLCSVRAGKAGPNWLDRLRSNKGFPIVDNLELDHFLTDQTLDNPSSSSLLDSKPHSTQAD 60
           MLCSVRAGKAGPNWLDRLRSNKGFPI DNLELDHFLTDQ LDNP   SL DS PHST+AD
Sbjct: 1   MLCSVRAGKAGPNWLDRLRSNKGFPITDNLELDHFLTDQNLDNP--CSLSDSNPHSTRAD 60

Query: 61  PHSDSDPNSQCRDNSSSSNSPVENENPSSYGIITNILSDLFNMTGSSRNSKCSGKKYPRK 120
           PHSD++ NSQ +DN SSSNSP+EN NPSS+ IIT+ILSDLFNM G+SRNSKC  KKYPRK
Sbjct: 61  PHSDANLNSQHQDN-SSSNSPIENGNPSSFEIITDILSDLFNMGGASRNSKCCSKKYPRK 120

Query: 121 QSNPKICSLPSGTSADYADAKNMCCLQKEDNILSSNSDNSSKGCFDVGSDVAQNVCLKVV 180
           QSNPKICS+PS  + DYADAKN+CCLQKEDNILSSNSDNSSKGC D GSD+AQNVCLKVV
Sbjct: 121 QSNPKICSIPSIANVDYADAKNLCCLQKEDNILSSNSDNSSKGCTDSGSDMAQNVCLKVV 180

Query: 181 EEEMGDEKCEKELKGYSKSEVTVIDTSDDVWKSDKLIFRRKNVWKVKDKKGKLRSYGRKK 240
           EEE+ DEKCEKELKGYSKSEVTVIDTSDDVWKSDKLIFRRK+VWKVKDKK KLRSYGRKK
Sbjct: 181 EEEVWDEKCEKELKGYSKSEVTVIDTSDDVWKSDKLIFRRKSVWKVKDKKCKLRSYGRKK 240

Query: 241 RKQSFEMNDLPDKIASTSKKTKVWGSEERFHFNEQKNRGKESLKPLNKGHNPQHCYGPEI 300
           RKQS EMNDLPD+I S SKKTKVWGSEERFH N+Q+  GKESLKPLNK HN QHCYGPEI
Sbjct: 241 RKQSSEMNDLPDRIVSASKKTKVWGSEERFHLNKQQIHGKESLKPLNKVHNLQHCYGPEI 300

Query: 301 RVNAPDSSNEKKENVYTLSQKNVSHDTK 329
           R+ APDSSNEKKEN  TLSQKN  +D K
Sbjct: 301 RLTAPDSSNEKKENGCTLSQKNGGYDPK 325

[Close]

BLAST of CaUC01G004820.1 vs. NCBI nr
Match: XP_011654849.1 (uncharacterized protein LOC105435450 [Cucumis sativus] >XP_011654850.1 uncharacterized protein LOC105435450 [Cucumis sativus] >KGN50314.1 hypothetical protein Csa_000369 [Cucumis sativus])

HSP 1 Score: 515.4 bits (1326), Expect = 4.0e-142
Identity = 270/328 (82.32%), Postives = 288/328 (87.80%), Query Frame = 0


Query: 1   MLCSVRAGKAGPNWLDRLRSNKGFPIVDNLELDHFLTDQTLDNPSSSSLLDSKPHSTQAD 60
           MLCSVRAGKAGPNWLDRLRSNKGFPI DNLELDHFLTDQ LDNP   SL DS PHST+AD
Sbjct: 1   MLCSVRAGKAGPNWLDRLRSNKGFPITDNLELDHFLTDQNLDNP--CSLSDSNPHSTRAD 60

Query: 61  PHSDSDPNSQCRDNSSSSNSPVENENPSSYGIITNILSDLFNMTGSSRNSKCSGKKYPRK 120
           P SD++ NS  +DN SSSNSP+EN NPSS+GIIT+ILSDLFNM G+SRNSKC  KKYPRK
Sbjct: 61  PRSDANLNSHHQDN-SSSNSPIENGNPSSFGIITDILSDLFNMGGASRNSKCFSKKYPRK 120

Query: 121 QSNPKICSLPSGTSADYADAKNMCCLQKEDNILSSNSDNSSKGCFDVGSDVAQNVCLKVV 180
           QSNPKI S+PS T+ DYADAKN+CCLQKEDNILSSNSDNSSKGC D GSD+AQNVCLKVV
Sbjct: 121 QSNPKIYSIPSVTNGDYADAKNLCCLQKEDNILSSNSDNSSKGCIDSGSDMAQNVCLKVV 180

Query: 181 EEEMGDEKCEKELKGYSKSEVTVIDTSDDVWKSDKLIFRRKNVWKVKDKKGKLRSYGRKK 240
           EEE+ DEKCEKELKGYSKSEVTVIDTSDDVWKSDKLIFRRK+VWKVKDKK KLRSYGRKK
Sbjct: 181 EEEVWDEKCEKELKGYSKSEVTVIDTSDDVWKSDKLIFRRKSVWKVKDKKCKLRSYGRKK 240

Query: 241 RKQSFEMNDLPDKIASTSKKTKVWGSEERFHFNEQKNRGKESLKPLNKGHNPQHCYGPEI 300
           RKQS E NDLPD+I S SKKTKVWGSEERFH N Q+  GKESLKPLNK HN QHCYGPE 
Sbjct: 241 RKQSSETNDLPDRIVSASKKTKVWGSEERFHLNRQQIHGKESLKPLNKVHNFQHCYGPES 300

Query: 301 RVNAPDSSNEKKENVYTLSQKNVSHDTK 329
           R+ APDSSNEKKEN  TLSQKN  +D K
Sbjct: 301 RLTAPDSSNEKKENGSTLSQKNGGYDPK 325

[Close]

BLAST of CaUC01G004820.1 vs. ExPASy TrEMBL
Match: A0A1S4DS96 (uncharacterized protein LOC103482569 OS=Cucumis melo OX=3656 GN=LOC103482569 PE=4 SV=1)

HSP 1 Score: 524.2 bits (1349), Expect = 4.1e-145
Identity = 273/328 (83.23%), Postives = 292/328 (89.02%), Query Frame = 0


Query: 1   MLCSVRAGKAGPNWLDRLRSNKGFPIVDNLELDHFLTDQTLDNPSSSSLLDSKPHSTQAD 60
           MLCSVRAGKAGPNWLDRLRSNKGFPI DNLELDHFLTDQ LDNP   SL DS PHST+AD
Sbjct: 1   MLCSVRAGKAGPNWLDRLRSNKGFPITDNLELDHFLTDQNLDNP--CSLSDSNPHSTRAD 60

Query: 61  PHSDSDPNSQCRDNSSSSNSPVENENPSSYGIITNILSDLFNMTGSSRNSKCSGKKYPRK 120
           PHSD++ NSQ +DN SSSNSP+EN NPSS+ IIT+ILSDLFNM G+SRNSKC  KKYPRK
Sbjct: 61  PHSDANLNSQHQDN-SSSNSPIENGNPSSFEIITDILSDLFNMGGASRNSKCCSKKYPRK 120

Query: 121 QSNPKICSLPSGTSADYADAKNMCCLQKEDNILSSNSDNSSKGCFDVGSDVAQNVCLKVV 180
           QSNPKICS+PS  + DYADAKN+CCLQKEDNILSSNSDNSSKGC D GSD+AQNVCLKVV
Sbjct: 121 QSNPKICSIPSIANVDYADAKNLCCLQKEDNILSSNSDNSSKGCTDSGSDMAQNVCLKVV 180

Query: 181 EEEMGDEKCEKELKGYSKSEVTVIDTSDDVWKSDKLIFRRKNVWKVKDKKGKLRSYGRKK 240
           EEE+ DEKCEKELKGYSKSEVTVIDTSDDVWKSDKLIFRRK+VWKVKDKK KLRSYGRKK
Sbjct: 181 EEEVWDEKCEKELKGYSKSEVTVIDTSDDVWKSDKLIFRRKSVWKVKDKKCKLRSYGRKK 240

Query: 241 RKQSFEMNDLPDKIASTSKKTKVWGSEERFHFNEQKNRGKESLKPLNKGHNPQHCYGPEI 300
           RKQS EMNDLPD+I S SKKTKVWGSEERFH N+Q+  GKESLKPLNK HN QHCYGPEI
Sbjct: 241 RKQSSEMNDLPDRIVSASKKTKVWGSEERFHLNKQQIHGKESLKPLNKVHNLQHCYGPEI 300

Query: 301 RVNAPDSSNEKKENVYTLSQKNVSHDTK 329
           R+ APDSSNEKKEN  TLSQKN  +D K
Sbjct: 301 RLTAPDSSNEKKENGCTLSQKNGGYDPK 325

[Close]

BLAST of CaUC01G004820.1 vs. ExPASy TrEMBL
Match: A0A5A7TPJ9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1167G00200 PE=4 SV=1)

HSP 1 Score: 524.2 bits (1349), Expect = 4.1e-145
Identity = 273/328 (83.23%), Postives = 292/328 (89.02%), Query Frame = 0


Query: 1   MLCSVRAGKAGPNWLDRLRSNKGFPIVDNLELDHFLTDQTLDNPSSSSLLDSKPHSTQAD 60
           MLCSVRAGKAGPNWLDRLRSNKGFPI DNLELDHFLTDQ LDNP   SL DS PHST+AD
Sbjct: 1   MLCSVRAGKAGPNWLDRLRSNKGFPITDNLELDHFLTDQNLDNP--CSLSDSNPHSTRAD 60

Query: 61  PHSDSDPNSQCRDNSSSSNSPVENENPSSYGIITNILSDLFNMTGSSRNSKCSGKKYPRK 120
           PHSD++ NSQ +DN SSSNSP+EN NPSS+ IIT+ILSDLFNM G+SRNSKC  KKYPRK
Sbjct: 61  PHSDANLNSQHQDN-SSSNSPIENGNPSSFEIITDILSDLFNMGGASRNSKCCSKKYPRK 120

Query: 121 QSNPKICSLPSGTSADYADAKNMCCLQKEDNILSSNSDNSSKGCFDVGSDVAQNVCLKVV 180
           QSNPKICS+PS  + DYADAKN+CCLQKEDNILSSNSDNSSKGC D GSD+AQNVCLKVV
Sbjct: 121 QSNPKICSIPSIANVDYADAKNLCCLQKEDNILSSNSDNSSKGCTDSGSDMAQNVCLKVV 180

Query: 181 EEEMGDEKCEKELKGYSKSEVTVIDTSDDVWKSDKLIFRRKNVWKVKDKKGKLRSYGRKK 240
           EEE+ DEKCEKELKGYSKSEVTVIDTSDDVWKSDKLIFRRK+VWKVKDKK KLRSYGRKK
Sbjct: 181 EEEVWDEKCEKELKGYSKSEVTVIDTSDDVWKSDKLIFRRKSVWKVKDKKCKLRSYGRKK 240

Query: 241 RKQSFEMNDLPDKIASTSKKTKVWGSEERFHFNEQKNRGKESLKPLNKGHNPQHCYGPEI 300
           RKQS EMNDLPD+I S SKKTKVWGSEERFH N+Q+  GKESLKPLNK HN QHCYGPEI
Sbjct: 241 RKQSSEMNDLPDRIVSASKKTKVWGSEERFHLNKQQIHGKESLKPLNKVHNLQHCYGPEI 300

Query: 301 RVNAPDSSNEKKENVYTLSQKNVSHDTK 329
           R+ APDSSNEKKEN  TLSQKN  +D K
Sbjct: 301 RLTAPDSSNEKKENGCTLSQKNGGYDPK 325

[Close]

BLAST of CaUC01G004820.1 vs. ExPASy TrEMBL
Match: A0A0A0KN29 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G167060 PE=4 SV=1)

HSP 1 Score: 515.4 bits (1326), Expect = 1.9e-142
Identity = 270/328 (82.32%), Postives = 288/328 (87.80%), Query Frame = 0


Query: 1   MLCSVRAGKAGPNWLDRLRSNKGFPIVDNLELDHFLTDQTLDNPSSSSLLDSKPHSTQAD 60
           MLCSVRAGKAGPNWLDRLRSNKGFPI DNLELDHFLTDQ LDNP   SL DS PHST+AD
Sbjct: 1   MLCSVRAGKAGPNWLDRLRSNKGFPITDNLELDHFLTDQNLDNP--CSLSDSNPHSTRAD 60

Query: 61  PHSDSDPNSQCRDNSSSSNSPVENENPSSYGIITNILSDLFNMTGSSRNSKCSGKKYPRK 120
           P SD++ NS  +DN SSSNSP+EN NPSS+GIIT+ILSDLFNM G+SRNSKC  KKYPRK
Sbjct: 61  PRSDANLNSHHQDN-SSSNSPIENGNPSSFGIITDILSDLFNMGGASRNSKCFSKKYPRK 120

Query: 121 QSNPKICSLPSGTSADYADAKNMCCLQKEDNILSSNSDNSSKGCFDVGSDVAQNVCLKVV 180
           QSNPKI S+PS T+ DYADAKN+CCLQKEDNILSSNSDNSSKGC D GSD+AQNVCLKVV
Sbjct: 121 QSNPKIYSIPSVTNGDYADAKNLCCLQKEDNILSSNSDNSSKGCIDSGSDMAQNVCLKVV 180

Query: 181 EEEMGDEKCEKELKGYSKSEVTVIDTSDDVWKSDKLIFRRKNVWKVKDKKGKLRSYGRKK 240
           EEE+ DEKCEKELKGYSKSEVTVIDTSDDVWKSDKLIFRRK+VWKVKDKK KLRSYGRKK
Sbjct: 181 EEEVWDEKCEKELKGYSKSEVTVIDTSDDVWKSDKLIFRRKSVWKVKDKKCKLRSYGRKK 240

Query: 241 RKQSFEMNDLPDKIASTSKKTKVWGSEERFHFNEQKNRGKESLKPLNKGHNPQHCYGPEI 300
           RKQS E NDLPD+I S SKKTKVWGSEERFH N Q+  GKESLKPLNK HN QHCYGPE 
Sbjct: 241 RKQSSETNDLPDRIVSASKKTKVWGSEERFHLNRQQIHGKESLKPLNKVHNFQHCYGPES 300

Query: 301 RVNAPDSSNEKKENVYTLSQKNVSHDTK 329
           R+ APDSSNEKKEN  TLSQKN  +D K
Sbjct: 301 RLTAPDSSNEKKENGSTLSQKNGGYDPK 325

[Close]

BLAST of CaUC01G004820.1 vs. ExPASy TrEMBL
Match: A0A6J1J8F5 (uncharacterized protein LOC111482689 OS=Cucurbita maxima OX=3661 GN=LOC111482689 PE=4 SV=1)

HSP 1 Score: 486.9 bits (1252), Expect = 7.3e-134
Identity = 256/326 (78.53%), Postives = 276/326 (84.66%), Query Frame = 0


Query: 1   MLCSVRAGKAGPNWLDRLRSNKGFPIVDNLELDHFLTDQTLDNPSSSSLLDSKPHSTQAD 60
           MLCSVRAGKA PNWLDRLRSNKGFPI DNL+LDHFLT+Q LDNPS SSL  S PHS   D
Sbjct: 1   MLCSVRAGKAAPNWLDRLRSNKGFPIADNLDLDHFLTNQNLDNPSPSSLPHSSPHSALPD 60

Query: 61  PHSDSDPNSQCRDNSSSSNSPVENENPSSYGIITNILSDLFNMTGSSRNSKCSGKKYPRK 120
           PHSDS PNS  RDNSSSSNSP+EN NPSSYGIIT ILSDLF+MTG+SR+SKCSGKK PRK
Sbjct: 61  PHSDSHPNSHRRDNSSSSNSPIENGNPSSYGIITGILSDLFHMTGASRSSKCSGKKLPRK 120

Query: 121 QSNPKICSLPSGTSADYADAKNMCCLQKEDNILSSNSDNSSKGCFDVGSDVAQNVCLKVV 180
           QSNPKICS+PS T+ADYAD KN+CC QKEDNILSSNSDNSSKG  + GSD AQN    V 
Sbjct: 121 QSNPKICSVPSLTNADYADDKNLCCAQKEDNILSSNSDNSSKGGANAGSDKAQNARSMVE 180

Query: 181 EEEMGDEKCEKELKGYSKSEVTVIDTSDDVWKSDKLIFRRKNVWKVKDKKGKLRSYGRKK 240
           EEE+ DEK EKEL+GYSKSEVTVIDTS DVWKSDKLIFRRKNVWKVKDKKGKLRSYGRKK
Sbjct: 181 EEEVEDEKGEKELQGYSKSEVTVIDTSSDVWKSDKLIFRRKNVWKVKDKKGKLRSYGRKK 240

Query: 241 RKQSFEMNDLPDKIASTSKKTKVWGSEERFHFNEQKNRGKESLKPLNKGHNPQHCYGPEI 300
           RKQ  EMN L D  AS SKK K WGSEERFHFN  + RGKE+LK LNKG+N  HC GPEI
Sbjct: 241 RKQCSEMNGLSDMTASASKKAKFWGSEERFHFNAPQIRGKEALKQLNKGYNSHHCSGPEI 300

Query: 301 RVNAPDSSNEKKENVYTLSQKNVSHD 327
            V+APDSSN+KK NVY+LSQ+N S+D
Sbjct: 301 SVSAPDSSNDKKGNVYSLSQENGSYD 326

[Close]

BLAST of CaUC01G004820.1 vs. ExPASy TrEMBL
Match: A0A6J1E997 (uncharacterized protein LOC111430562 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111430562 PE=4 SV=1)

HSP 1 Score: 486.1 bits (1250), Expect = 1.2e-133
Identity = 256/326 (78.53%), Postives = 277/326 (84.97%), Query Frame = 0


Query: 1   MLCSVRAGKAGPNWLDRLRSNKGFPIVDNLELDHFLTDQTLDNPSSSSLLDSKPHSTQAD 60
           MLCSVRAGKA PNWLDRLRSNKGFPI DNL+LDHFLT+Q LDNPS SSL  S PHS   D
Sbjct: 1   MLCSVRAGKAAPNWLDRLRSNKGFPIADNLDLDHFLTNQNLDNPSPSSLPHSSPHSALPD 60

Query: 61  PHSDSDPNSQCRDNSSSSNSPVENENPSSYGIITNILSDLFNMTGSSRNSKCSGKKYPRK 120
           PHSDS PNS  RDNSSSSNSP+EN NPSSYGIIT ILSDLFN+TG+SR+SKCSGKK PRK
Sbjct: 61  PHSDSHPNSHRRDNSSSSNSPIENGNPSSYGIITGILSDLFNITGASRSSKCSGKKLPRK 120

Query: 121 QSNPKICSLPSGTSADYADAKNMCCLQKEDNILSSNSDNSSKGCFDVGSDVAQNVCLKVV 180
           QSNPKICS+PS T+ADYAD KN+CC QKEDNILSSNSDNSSKG  + GSD AQN    V 
Sbjct: 121 QSNPKICSVPSLTNADYADDKNLCCAQKEDNILSSNSDNSSKGGANAGSDKAQNARSMVE 180

Query: 181 EEEMGDEKCEKELKGYSKSEVTVIDTSDDVWKSDKLIFRRKNVWKVKDKKGKLRSYGRKK 240
           EEE+ DEK EKEL+GYSKSEVTVIDTS DVWKSDKLIFRRKNVWKVKDKKGKLRSYGRKK
Sbjct: 181 EEEVEDEKGEKELQGYSKSEVTVIDTSSDVWKSDKLIFRRKNVWKVKDKKGKLRSYGRKK 240

Query: 241 RKQSFEMNDLPDKIASTSKKTKVWGSEERFHFNEQKNRGKESLKPLNKGHNPQHCYGPEI 300
           RKQ  EMN L D  AS SK TK WGSEERFHFN  + RGKE+LK LNKG+N QHC  PEI
Sbjct: 241 RKQCSEMNGLSDMTASASKITKFWGSEERFHFNAPQIRGKEALKQLNKGYNSQHCSDPEI 300

Query: 301 RVNAPDSSNEKKENVYTLSQKNVSHD 327
            V+APDSSN+KKE+VY+LSQ+N S+D
Sbjct: 301 SVSAPDSSNDKKESVYSLSQENGSYD 326

[Close]

BLAST of CaUC01G004820.1 vs. TAIR 10
Match: AT5G24500.1 (unknown protein; Has 133 Blast hits to 129 proteins in 40 species: Archae - 2; Bacteria - 0; Metazoa - 60; Fungi - 5; Plants - 29; Viruses - 0; Other Eukaryotes - 37 (source: NCBI BLink). )

HSP 1 Score: 114.4 bits (285), Expect = 1.9e-25
Identity = 98/279 (35.13%), Postives = 147/279 (52.69%), Query Frame = 0


Query: 1   MLCSVRAGK-AGPNWLDRLRSNKGFPIVDNLELDHFLTDQTLDNPSSSSLLDSKPHSTQ- 60
           ML S+   K A   WL+RLR N+G    D         D    NP +      + H T+ 
Sbjct: 1   MLSSIIDDKPASSTWLNRLRLNRGLTTDD---------DDASGNPLTLDDFLRRNHHTEI 60

Query: 61  --ADPHSDSDPNSQCRDNSSSSNSPVENENPSS-YGIITNILSDLFNMTGSSRNSKCSG- 120
                 SDS P++    +   + SP E   P   YG+++++L +LFN +GSS++S   G 
Sbjct: 61  AATSSASDSPPSAPIPSDPELAESPSEEPVPGEWYGVMSDVLFELFNFSGSSKSSTIPGK 120

Query: 121 KKYPRKQSNPKICSLPSG-------TSADYADAKNMCCLQKEDNILSSNSDNSSKGCFDV 180
           KK PRKQSNP+ CSL +         +    DA  +  +++     S +S N      ++
Sbjct: 121 KKLPRKQSNPRHCSLETPEDVVVPLVNQKSDDANCLPSVREFATSSSRSSYNKKPPAPEI 180

Query: 181 GSDVAQNVCLKVVEEEMGDEKCEKELKGYSKSEVTVIDTSDDVWKSDKLIFRRKNVWKVK 240
                  V    V+EE  +EK EK+L G+S+SEVTVIDTS  +WKS+KL+FRR+NVWKV+
Sbjct: 181 RERRRSVVEGDGVDEE--EEKGEKDLVGFSRSEVTVIDTSFKIWKSEKLVFRRRNVWKVR 240

Query: 241 DKKG------KLRSYGRKKRKQSFEMNDLPDKIASTSKK 261
           +KKG      KL+   +KK+K+  + +D+ D     ++K
Sbjct: 241 EKKGKSRVVSKLKKLMKKKKKKKRKCDDVDDDDGGIARK 268

The following BLAST results are available for this feature:

BLAST of CaUC01G004820.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038877116.1	2.8e-156	87.01	uncharacterized protein LOC120069436 isoform X1 [Benincasa hispida]	[more]
XP_038877117.1	1.4e-155	86.97	uncharacterized protein LOC120069436 isoform X2 [Benincasa hispida]	[more]
KAA0043481.1	8.5e-145	83.23	uncharacterized protein E6C27_scaffold1167G00200 [Cucumis melo var. makuwa]	[more]
XP_016898859.1	8.5e-145	83.23	PREDICTED: uncharacterized protein LOC103482569 [Cucumis melo] >XP_016898860.1 P...	[more]
XP_011654849.1	4.0e-142	82.32	uncharacterized protein LOC105435450 [Cucumis sativus] >XP_011654850.1 uncharact...	[more]

BLAST of CaUC01G004820.1 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CaUC01G004820.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S4DS96	4.1e-145	83.23	uncharacterized protein LOC103482569 OS=Cucumis melo OX=3656 GN=LOC103482569 PE=...	[more]
A0A5A7TPJ9	4.1e-145	83.23	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A0A0KN29	1.9e-142	82.32	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G167060 PE=4 SV=1	[more]
A0A6J1J8F5	7.3e-134	78.53	uncharacterized protein LOC111482689 OS=Cucurbita maxima OX=3661 GN=LOC111482689...	[more]
A0A6J1E997	1.2e-133	78.53	uncharacterized protein LOC111430562 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]

BLAST of CaUC01G004820.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G24500.1	1.9e-25	35.13	unknown protein; Has 133 Blast hits to 129 proteins in 40 species: Archae - 2; B...	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 275..296
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 43..89
None	No IPR available	PANTHER	PTHR37258	FANTOM PROTEIN	coord: 1..331
None	No IPR available	PANTHER	PTHR37258:SF1	FANTOM PROTEIN	coord: 1..331

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CaUC01G004820	CaUC01G004820	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CaUC01G004820.1-exon	CaUC01G004820.1-exon-Ciama_Chr01:5135396..5136259	exon
CaUC01G004820.1-exon	CaUC01G004820.1-exon-Ciama_Chr01:5137907..5138113	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CaUC01G004820.1-cds	CaUC01G004820.1-cds-Ciama_Chr01:5135396..5136259	CDS
CaUC01G004820.1-cds	CaUC01G004820.1-cds-Ciama_Chr01:5137907..5138113	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CaUC01G004820.1	CaUC01G004820.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane