CSPI05G19080.1 (mRNA) Cucumber (PI 183967) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAGAAGAGAATAAACGATTTTAACCAAAAAAAGATATGGCATTTGATCACCTTCCGCCCTGGAATTTATAGTTATATCAAAACATTCAAAACAGCTTCCCTCTTATCTCTCTTCCTTCTTTCAATTAGGATTATTAGGTTTCATACTTCCGATTTGAATAATGGAACTGTCCAAATTTCAACTAAAATAATGGGTTTTCCATTCTGATTCTGCAACTTTACACCATATCTTCCATCCCACCACATCCCTCTTTCTCTCACTCTCTCTCTCTCTCCATTTATTTCCTCTGTCGAATCTTACCCACTCCATAACCAGTAAAGGCTATGGAAACCCACCTCCCTCTTCTCTGCCCCTTCTCACTTCTACACTCTGCTTCTCACTGCCGCTGCCATAGCCTTCAACGCAGAGCTTAGCCCTTAAGGGCACTCCAGATTCTTCAACCCCCATATGTATGTCACCTCTAATTCCAACCCCCTTCTTTTGTTTTTGCCTGATTGCCCCACTTCTGTTTTGATTCTGCTCTGCTTTCTTTTAGGTGTTTTGTTCGTGATGATGATGAGATGAAATCCCTTTTTTTCTGGGTAATGATTATTCTCTTGGTGGGGTTTTCTATTGTTTCTTACTTAGAATTGTTTCTGGCGTTTCCCCCCTTTGCATTACTGGGACTGCTGAGGTTGGTGATTGTGTGTTTTGCTGTGCTTCCATGGTGCTTTTTGTTGTGGCCGGCCTTGTGTCTGCCAGTTTTATGTGAGATGTTTGGTTGTGTTTAAGTTTCGAGTGTAAAAAGGAAGTTTATATAAACCTAGGTTTATGTAGAGATTTGTATTTTTGTAGTTTGTGACGAACAATTGCGTATACCAATCCTAAGTTTGGCTTCTTGATCTCAAGTTATTGGAGCTGAATCCCTGAATCAAAGTCTGGTGGAGTTTATTTCTGGGTCCATACTTGTTTCTTGTTCTTCATTAGTTCAAATTCAAAGGTATTTATAGTAGAAAAACTGCAGAAATGTTGAGACTTATGGCTTTTACATGGATCCATAGCAAAAGGCAGATCCAGTATTTGGACTTCTTTCTCAAATGAAGAAGAAAAGATCATCATAAACTTGGATATTCTATATGCTGCAGCCCGTTAGTTTGAACCCTTTTAGGTTTAGGGGTGATTTAACATGGCTCTAAAGTTTGAAGTCATAATTCTCAACTACTTCAGTTTCATCTCCTTTCCATTTCTTTTGAGTAGTTCATATATTGAGCCTCTTAAATCCAAAATTTTCCAACTTGGCATGTGAGAGGAAATGCTGGATGTGCCAAGTGATTGAATTTTAGGAAAAAAATTATTTTCTCTTGTATCCCTATACTTAACTCAATGAGTCCATGTTGACATTGAGTTTTAAATTTCATCAAATATATCCTCGAACTTGATTTCATGATGAAATTGATACTCTCGATTAGTTGAAATTTCTCTGTTCTGAGATTTAGACTATCTATAGGTGTTTGGAGGAGATTGTTTTTGTGTATATTTATCTTGTGCTTGTGTTGGATTTTTTTTTTTATTGAGTTTGGATATTTTGTTGACCTTGCGCACTTTTACTTGATTTTTCTTGTAAGGTACAACTTACAAGTATCTTTCTTGTGGTGGGGTTGTCCAGTATTTTGGTGCTTTGATTTTGAGTGTTTTGATTGTTCGTTTGGTTTATTGAAGTGTAAATTTCACCTCTTAATCAAGTTGGAGGGTTAGGGTCCAATCACAATCATAAACATAAAAATTAACCCACTAAGTATAGGAGGTATTAGGAAACTATCTTTTAATGTGCTCTATCTAATCAACTGAAGCCTTTGGAGTTTGGACCTACTAGTTATATTATAACTGTTTGAATATCATTTAAGATATAAACAAATAAAATGTCGAAGATATGAATAGCATCAGCACTTCTTTGCATTTTCTTTCCCACTATTATGCAATTAACTGGGAGCAACATTAACTTATATGATTGTTTTTGTGATTCTGAACACAGAAGGAAAAAGAGTGATTCTTTGTTTTGGAAGCCTCTGGTTCTTTACTTTCAGCGCTATTCATCCAAATATGGAAGCTTTAAATTTAAACCTTGAAGCTGCAAAAGATTCAGAGCCCAGCAGCAGTCAAGCAGCAAATCCTGATCACTCCAACACTGCCACTACCACTTCTTCCTGTCCACCAAGCTTGAGTAAAGTAGTCGTTGTTGATACAAGTCCCATTTCACTTGACTTGACACTGCAGTTCAACTCCAACGATATCGATTCAAAGGGTGATGGCGAGATCAATGGGGAAACAAATAGTAACAAATCATCATCTTCAACAGTACCAAGAGTTTTCTCTTGCAATTACTGTCGACGCAAGTTCTTTAGCTCACAAGCACTTGGTGGGCATCAAAATGCACACAAAAGAGAAAGGACAATGGCTAAACGTGTAACACGGATGGGAATGTTCTTCGACAGATACGGTAGCTTGGCTTCTCTGCCACTTCATGGCTCAGCTCTAAGATCCCTTGGCATTGAAGCTCACGGTGCTCTACACCAAACAGTTGTTGCTTCAGATCAGAGGCCTTATCCTGGTAGGAGTGTTGGAGCAAAGTTCGAGCAAAGCTCTTTTGGGTTCCCAACATTCATCGAGGACTACGATGATGATGTAGGGATGTTTTGGCCCGGAAGTTTCAGGCAGGTGGCTGCCAAAGTCGATAGCGGCTTAGGTCCTTTGAAAACCACAGTTCAAAATTCAAATCCAGAGTTTGGGAAAACAATGCCTCCACCAAGAACAGAAGCAGGATCATCACCTGATCTCACTTTGAGGCTTTAGTAAGTAATTTTCTTCTCTTTGATGCCTTCTCCTTAATGTATCAACTTTTGTAAAGTGGGATGATGTCTGCCATTGTCTGCCATCTTTTTAGTGGCTCTAAGCTCAAGAATTATTGAATAAATCTTCAATTTTTTTTTTTCTCATTACCTTTACTAATATCCAAGTCTTTAGCTTTTTGATCCCTTGATTCCTTTTTCTTTCCAATTTTTGTCCATGGATTCCAAAAGCTTCTATTATAATCTCTCCATTATTTGGATAATTGAACTGATACTTTTTCTGTCAAATCGATTGAAGTAGCCTATAGTTGGCATTTGAACAAGACAATTTGCAAACAGAGCTTCTAATGTAGCAGTTGATCCTGATTGTGACAGCATTTTGTTGGAGTGTTGATGTCTTTGTTGATTGATGTGTTAGAGAGAATTCAAACTACTGTTATGTAAACATCAAATTGAGTTGAGGAATTTGATGAGAAATGGAAATGACAGCATATTGATATTCCTACTGTTCATAATATAACAACCCGATAATCTCTCTAATCTCTCTCGTACGTGTCCGATTTTAAGCTGGATATCATCACCAACTTGAGCTGTAATATATAGATTGTAGGTCTAATCTATTAGTTGTTCTTTTTTTCTTTATACACTTTGTAAATATTGTTCTATATCTATAGACATATGTTGTACACATGTGTACAACGTACATTAAGGAACAGAATACATTTGATTATTGTTAAGTTGATTAGATGAAGTTGTTTGATGTACAGATAATTTTGAATTGAGTCAAAAGGAGATTGACTGAGTGGTATTATTGGGAACAAAAAAGTCCATTTAATATCTTCTCTGTGTCAACCCATTC AAGAAGAGAATAAACGATTTTAACCAAAAAAAGATATGGCATTTGATCACCTTCCGCCCTGGAATTTATAGTTATATCAAAACATTCAAAACAGCTTCCCTCTTATCTCTCTTCCTTCTTTCAATTAGGATTATTAGGTTTCATACTTCCGATTTGAATAATGGAACTGTCCAAATTTCAACTAAAATAATGGGTTTTCCATTCTGATTCTGCAACTTTACACCATATCTTCCATCCCACCACATCCCTCTTTCTCTCACTCTCTCTCTCTCTCCATTTATTTCCTCTGTCGAATCTTACCCACTCCATAACCAGTAAAGGCTATGGAAACCCACCTCCCTCTTCTCTGCCCCTTCTCACTTCTACACTCTGCTTCTCACTGCCGCTGCCATAGCCTTCAACGCAGAGCTTAGCCCTTAAGGGCACTCCAGATTCTTCAACCCCCATATGTATGTCACCTCTAATTCCAACCCCCTTCTTTTGTTTTTGCCTGATTGCCCCACTTCTGTTTTGATTCTGCTCTGCTTTCTTTTAGGTGTTTTGTTCGTGATGATGATGAGATGAAATCCCTTTTTTTCTGGAAGGAAAAAGAGTGATTCTTTGTTTTGGAAGCCTCTGGTTCTTTACTTTCAGCGCTATTCATCCAAATATGGAAGCTTTAAATTTAAACCTTGAAGCTGCAAAAGATTCAGAGCCCAGCAGCAGTCAAGCAGCAAATCCTGATCACTCCAACACTGCCACTACCACTTCTTCCTGTCCACCAAGCTTGAGTAAAGTAGTCGTTGTTGATACAAGTCCCATTTCACTTGACTTGACACTGCAGTTCAACTCCAACGATATCGATTCAAAGGGTGATGGCGAGATCAATGGGGAAACAAATAGTAACAAATCATCATCTTCAACAGTACCAAGAGTTTTCTCTTGCAATTACTGTCGACGCAAGTTCTTTAGCTCACAAGCACTTGGTGGGCATCAAAATGCACACAAAAGAGAAAGGACAATGGCTAAACGTGTAACACGGATGGGAATGTTCTTCGACAGATACGGTAGCTTGGCTTCTCTGCCACTTCATGGCTCAGCTCTAAGATCCCTTGGCATTGAAGCTCACGGTGCTCTACACCAAACAGTTGTTGCTTCAGATCAGAGGCCTTATCCTGGTAGGAGTGTTGGAGCAAAGTTCGAGCAAAGCTCTTTTGGGTTCCCAACATTCATCGAGGACTACGATGATGATGTAGGGATGTTTTGGCCCGGAAGTTTCAGGCAGGTGGCTGCCAAAGTCGATAGCGGCTTAGGTCCTTTGAAAACCACAGTTCAAAATTCAAATCCAGAGTTTGGGAAAACAATGCCTCCACCAAGAACAGAAGCAGGATCATCACCTGATCTCACTTTGAGGCTTTATAGCCTATAGTTGGCATTTGAACAAGACAATTTGCAAACAGAGCTTCTAATGTAGCAGTTGATCCTGATTGTGACAGCATTTTGTTGGAGTGTTGATGTCTTTGTTGATTGATGTGTTAGAGAGAATTCAAACTACTGTTATGTAAACATCAAATTGAGTTGAGGAATTTGATGAGAAATGGAAATGACAGCATATTGATATTCCTACTGTTCATAATATAACAACCCGATAATCTCTCTAATCTCTCTCGTACGTGTCCGATTTTAAGCTGGATATCATCACCAACTTGAGCTGTAATATATAGATTGTAGGTCTAATCTATTAGTTGTTCTTTTTTTCTTTATACACTTTGTAAATATTGTTCTATATCTATAGACATATGTTGTACACATGTGTACAACGTACATTAAGGAACAGAATACATTTGATTATTGTTAAGTTGATTAGATGAAGTTGTTTGATGTACAGATAATTTTGAATTGAGTCAAAAGGAGATTGACTGAGTGGTATTATTGGGAACAAAAAAGTCCATTTAATATCTTCTCTGTGTCAACCCATTC ATGGAAGCTTTAAATTTAAACCTTGAAGCTGCAAAAGATTCAGAGCCCAGCAGCAGTCAAGCAGCAAATCCTGATCACTCCAACACTGCCACTACCACTTCTTCCTGTCCACCAAGCTTGAGTAAAGTAGTCGTTGTTGATACAAGTCCCATTTCACTTGACTTGACACTGCAGTTCAACTCCAACGATATCGATTCAAAGGGTGATGGCGAGATCAATGGGGAAACAAATAGTAACAAATCATCATCTTCAACAGTACCAAGAGTTTTCTCTTGCAATTACTGTCGACGCAAGTTCTTTAGCTCACAAGCACTTGGTGGGCATCAAAATGCACACAAAAGAGAAAGGACAATGGCTAAACGTGTAACACGGATGGGAATGTTCTTCGACAGATACGGTAGCTTGGCTTCTCTGCCACTTCATGGCTCAGCTCTAAGATCCCTTGGCATTGAAGCTCACGGTGCTCTACACCAAACAGTTGTTGCTTCAGATCAGAGGCCTTATCCTGGTAGGAGTGTTGGAGCAAAGTTCGAGCAAAGCTCTTTTGGGTTCCCAACATTCATCGAGGACTACGATGATGATGTAGGGATGTTTTGGCCCGGAAGTTTCAGGCAGGTGGCTGCCAAAGTCGATAGCGGCTTAGGTCCTTTGAAAACCACAGTTCAAAATTCAAATCCAGAGTTTGGGAAAACAATGCCTCCACCAAGAACAGAAGCAGGATCATCACCTGATCTCACTTTGAGGCTTTATAGCCTATAG MEALNLNLEAAKDSEPSSSQAANPDHSNTATTTSSCPPSLSKVVVVDTSPISLDLTLQFNSNDIDSKGDGEINGETNSNKSSSSTVPRVFSCNYCRRKFFSSQALGGHQNAHKRERTMAKRVTRMGMFFDRYGSLASLPLHGSALRSLGIEAHGALHQTVVASDQRPYPGRSVGAKFEQSSFGFPTFIEDYDDDVGMFWPGSFRQVAAKVDSGLGPLKTTVQNSNPEFGKTMPPPRTEAGSSPDLTLRLYSL* Homology
BLAST of CSPI05G19080.1 vs. ExPASy Swiss-Prot
Match: Q39263 (Zinc finger protein 4 OS=Arabidopsis thaliana OX=3702 GN=ZFP4 PE=2 SV=2) HSP 1 Score: 122.9 bits (307), Expect = 5.3e-27 Identity = 106/284 (37.32%), Postives = 134/284 (47.18%), Query Frame = 0
BLAST of CSPI05G19080.1 vs. ExPASy Swiss-Prot
Match: Q39266 (Zinc finger protein 7 OS=Arabidopsis thaliana OX=3702 GN=ZFP7 PE=1 SV=1) HSP 1 Score: 114.8 bits (286), Expect = 1.5e-24 Identity = 83/198 (41.92%), Postives = 103/198 (52.02%), Query Frame = 0
BLAST of CSPI05G19080.1 vs. ExPASy Swiss-Prot
Match: Q42485 (Zinc finger protein 1 OS=Arabidopsis thaliana OX=3702 GN=ZFP1 PE=2 SV=1) HSP 1 Score: 91.3 bits (225), Expect = 1.7e-17 Identity = 68/183 (37.16%), Postives = 93/183 (50.82%), Query Frame = 0
BLAST of CSPI05G19080.1 vs. ExPASy Swiss-Prot
Match: Q39262 (Zinc finger protein 3 OS=Arabidopsis thaliana OX=3702 GN=ZFP3 PE=1 SV=1) HSP 1 Score: 89.7 bits (221), Expect = 5.0e-17 Identity = 47/85 (55.29%), Postives = 60/85 (70.59%), Query Frame = 0
BLAST of CSPI05G19080.1 vs. ExPASy Swiss-Prot
Match: Q39261 (Zinc finger protein 2 OS=Arabidopsis thaliana OX=3702 GN=ZFP2 PE=1 SV=1) HSP 1 Score: 71.6 bits (174), Expect = 1.4e-11 Identity = 33/49 (67.35%), Postives = 41/49 (83.67%), Query Frame = 0
BLAST of CSPI05G19080.1 vs. ExPASy TrEMBL
Match: A0A0A0KPA2 (C2H2-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G548160 PE=4 SV=1) HSP 1 Score: 490.0 bits (1260), Expect = 6.1e-135 Identity = 249/249 (100.00%), Postives = 249/249 (100.00%), Query Frame = 0
BLAST of CSPI05G19080.1 vs. ExPASy TrEMBL
Match: A0A1S3CTQ8 (zinc finger protein 7-like OS=Cucumis melo OX=3656 GN=LOC103504366 PE=4 SV=1) HSP 1 Score: 471.1 bits (1211), Expect = 2.9e-129 Identity = 238/252 (94.44%), Postives = 243/252 (96.43%), Query Frame = 0
BLAST of CSPI05G19080.1 vs. ExPASy TrEMBL
Match: A0A5D3E1W6 (Zinc finger protein 7-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold857G00040 PE=4 SV=1) HSP 1 Score: 469.2 bits (1206), Expect = 1.1e-128 Identity = 237/249 (95.18%), Postives = 241/249 (96.79%), Query Frame = 0
BLAST of CSPI05G19080.1 vs. ExPASy TrEMBL
Match: A0A6J1JQ26 (zinc finger protein 7-like OS=Cucurbita maxima OX=3661 GN=LOC111487865 PE=4 SV=1) HSP 1 Score: 410.6 bits (1054), Expect = 4.7e-111 Identity = 209/251 (83.27%), Postives = 225/251 (89.64%), Query Frame = 0
BLAST of CSPI05G19080.1 vs. ExPASy TrEMBL
Match: A0A6J1E2E8 (zinc finger protein 4-like OS=Cucurbita moschata OX=3662 GN=LOC111430156 PE=4 SV=1) HSP 1 Score: 408.3 bits (1048), Expect = 2.3e-110 Identity = 210/253 (83.00%), Postives = 226/253 (89.33%), Query Frame = 0
BLAST of CSPI05G19080.1 vs. NCBI nr
Match: XP_004142819.2 (zinc finger protein 7 [Cucumis sativus] >XP_004142820.2 zinc finger protein 7 [Cucumis sativus] >XP_031741931.1 zinc finger protein 7 [Cucumis sativus] >KAE8648580.1 hypothetical protein Csa_008564 [Cucumis sativus]) HSP 1 Score: 495.0 bits (1273), Expect = 3.9e-136 Identity = 251/252 (99.60%), Postives = 252/252 (100.00%), Query Frame = 0
BLAST of CSPI05G19080.1 vs. NCBI nr
Match: XP_008466973.1 (PREDICTED: zinc finger protein 7-like [Cucumis melo] >XP_008466976.1 PREDICTED: zinc finger protein 7-like [Cucumis melo]) HSP 1 Score: 471.1 bits (1211), Expect = 6.1e-129 Identity = 238/252 (94.44%), Postives = 243/252 (96.43%), Query Frame = 0
BLAST of CSPI05G19080.1 vs. NCBI nr
Match: KAA0046429.1 (zinc finger protein 7-like [Cucumis melo var. makuwa] >TYK29778.1 zinc finger protein 7-like [Cucumis melo var. makuwa]) HSP 1 Score: 469.2 bits (1206), Expect = 2.3e-128 Identity = 237/249 (95.18%), Postives = 241/249 (96.79%), Query Frame = 0
BLAST of CSPI05G19080.1 vs. NCBI nr
Match: XP_038875240.1 (zinc finger protein 4-like [Benincasa hispida] >XP_038875241.1 zinc finger protein 4-like [Benincasa hispida]) HSP 1 Score: 454.9 bits (1169), Expect = 4.5e-124 Identity = 235/250 (94.00%), Postives = 240/250 (96.00%), Query Frame = 0
BLAST of CSPI05G19080.1 vs. NCBI nr
Match: XP_022991196.1 (zinc finger protein 7-like [Cucurbita maxima]) HSP 1 Score: 410.6 bits (1054), Expect = 9.8e-111 Identity = 209/251 (83.27%), Postives = 225/251 (89.64%), Query Frame = 0
BLAST of CSPI05G19080.1 vs. TAIR 10
Match: AT1G66140.1 (zinc finger protein 4 ) HSP 1 Score: 122.9 bits (307), Expect = 3.8e-28 Identity = 106/284 (37.32%), Postives = 134/284 (47.18%), Query Frame = 0
BLAST of CSPI05G19080.1 vs. TAIR 10
Match: AT1G24625.1 (zinc finger protein 7 ) HSP 1 Score: 114.8 bits (286), Expect = 1.0e-25 Identity = 83/198 (41.92%), Postives = 103/198 (52.02%), Query Frame = 0
BLAST of CSPI05G19080.1 vs. TAIR 10
Match: AT1G80730.1 (zinc-finger protein 1 ) HSP 1 Score: 91.3 bits (225), Expect = 1.2e-18 Identity = 68/183 (37.16%), Postives = 93/183 (50.82%), Query Frame = 0
BLAST of CSPI05G19080.1 vs. TAIR 10
Match: AT5G25160.1 (zinc finger protein 3 ) HSP 1 Score: 89.7 bits (221), Expect = 3.6e-18 Identity = 47/85 (55.29%), Postives = 60/85 (70.59%), Query Frame = 0
BLAST of CSPI05G19080.1 vs. TAIR 10
Match: AT5G10970.1 (C2H2 and C2HC zinc fingers superfamily protein ) HSP 1 Score: 86.3 bits (212), Expect = 3.9e-17 Identity = 49/87 (56.32%), Postives = 60/87 (68.97%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
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