CSPI05G10310.1 (mRNA) Cucumber (PI 183967) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GTAGAAGGTTGGAGAATATTATGGAATTTTTCTAACCTAAATAAAGGAGAAAAGAAAACGAATGAAGAGCTCAGAAAAGTCTGGAAATATCTCAAATTCTCTATTTCCATCCTATTTAAGTCCTTCCTATTGCCCCGTCACAGGCAACAAACAATAACTCATATATTTCACTCAACCATTCACATTTACCCACTCTTTTCACAGCCAAGCTTTCAAAGAAACCAACAACACCATGTCCCTCATTCCAAGCTTTTTCGGTGGTCGCCGCACCAACGTCTTCGACCCCTTTTCATTAGACGCATGGGATCCATTCCAAGGCTTCTCATTCTCTAATTCACTGTCTAATCTTCCTTCCTCTGCTTTTGCCAACACTCGCATCGACTGGAAGGAGACCCCACAAGCCCACATCTTCACAGCCGATCTTCCTGGAATCAACAAACAAGAAGTCAAAGTTGAGGTTCAAGAAGGCAGGGTTCTGCAGATCAGTGGAGAGAGAAGCAAAGAACAGGAAGAGAAGAACGACAAATGGCATAGGATTGAACGAAGCAGTGGGCAGTTCGTGAGGAGATTCAGGCTGCCTGAGAATGCCAAAGTTGATGAGGTGAAAGCCAGTATAGAGAATGGAGTTCTCACGGTGACAGTGCCTAAAGTGGAAGAGAAGAAGCCTGAAATAATTAAATCAATTGAAATCACTGATCACTAAAGCTCTCTGTGTTTGTGTGTTTTGTCCAATCTGATCTTATGGTTGAAAGTGTCGTTTGGTTCTTTAGTAATGAAATAAAAAGGCATGTCGTCCCTTTCAGTGATTATGGTTGTGTAGCTAATTATGAGGTAAATATATTGTATTTTAAAGCTTCAAGTTCAAACTGTTTGATGTAAAATTCTTTGG GTAGAAGGTTGGAGAATATTATGGAATTTTTCTAACCTAAATAAAGGAGAAAAGAAAACGAATGAAGAGCTCAGAAAAGTCTGGAAATATCTCAAATTCTCTATTTCCATCCTATTTAAGTCCTTCCTATTGCCCCGTCACAGGCAACAAACAATAACTCATATATTTCACTCAACCATTCACATTTACCCACTCTTTTCACAGCCAAGCTTTCAAAGAAACCAACAACACCATGTCCCTCATTCCAAGCTTTTTCGGTGGTCGCCGCACCAACGTCTTCGACCCCTTTTCATTAGACGCATGGGATCCATTCCAAGGCTTCTCATTCTCTAATTCACTGTCTAATCTTCCTTCCTCTGCTTTTGCCAACACTCGCATCGACTGGAAGGAGACCCCACAAGCCCACATCTTCACAGCCGATCTTCCTGGAATCAACAAACAAGAAGTCAAAGTTGAGGTTCAAGAAGGCAGGGTTCTGCAGATCAGTGGAGAGAGAAGCAAAGAACAGGAAGAGAAGAACGACAAATGGCATAGGATTGAACGAAGCAGTGGGCAGTTCGTGAGGAGATTCAGGCTGCCTGAGAATGCCAAAGTTGATGAGGTGAAAGCCAGTATAGAGAATGGAGTTCTCACGGTGACAGTGCCTAAAGTGGAAGAGAAGAAGCCTGAAATAATTAAATCAATTGAAATCACTGATCACTAAAGCTCTCTGTGTTTGTGTGTTTTGTCCAATCTGATCTTATGGTTGAAAGTGTCGTTTGGTTCTTTAGTAATGAAATAAAAAGGCATGTCGTCCCTTTCAGTGATTATGGTTGTGTAGCTAATTATGAGGTAAATATATTGTATTTTAAAGCTTCAAGTTCAAACTGTTTGATGTAAAATTCTTTGG ATGTCCCTCATTCCAAGCTTTTTCGGTGGTCGCCGCACCAACGTCTTCGACCCCTTTTCATTAGACGCATGGGATCCATTCCAAGGCTTCTCATTCTCTAATTCACTGTCTAATCTTCCTTCCTCTGCTTTTGCCAACACTCGCATCGACTGGAAGGAGACCCCACAAGCCCACATCTTCACAGCCGATCTTCCTGGAATCAACAAACAAGAAGTCAAAGTTGAGGTTCAAGAAGGCAGGGTTCTGCAGATCAGTGGAGAGAGAAGCAAAGAACAGGAAGAGAAGAACGACAAATGGCATAGGATTGAACGAAGCAGTGGGCAGTTCGTGAGGAGATTCAGGCTGCCTGAGAATGCCAAAGTTGATGAGGTGAAAGCCAGTATAGAGAATGGAGTTCTCACGGTGACAGTGCCTAAAGTGGAAGAGAAGAAGCCTGAAATAATTAAATCAATTGAAATCACTGATCACTAA MSLIPSFFGGRRTNVFDPFSLDAWDPFQGFSFSNSLSNLPSSAFANTRIDWKETPQAHIFTADLPGINKQEVKVEVQEGRVLQISGERSKEQEEKNDKWHRIERSSGQFVRRFRLPENAKVDEVKASIENGVLTVTVPKVEEKKPEIIKSIEITDH* Homology
BLAST of CSPI05G10310.1 vs. ExPASy Swiss-Prot
Match: P13853 (17.6 kDa class I heat shock protein 3 OS=Arabidopsis thaliana OX=3702 GN=HSP17.6C PE=2 SV=2) HSP 1 Score: 230.7 bits (587), Expect = 1.1e-59 Identity = 111/157 (70.70%), Postives = 137/157 (87.26%), Query Frame = 0
BLAST of CSPI05G10310.1 vs. ExPASy Swiss-Prot
Match: P27396 (17.8 kDa class I heat shock protein OS=Daucus carota OX=4039 PE=3 SV=1) HSP 1 Score: 230.3 bits (586), Expect = 1.5e-59 Identity = 113/157 (71.97%), Postives = 138/157 (87.90%), Query Frame = 0
BLAST of CSPI05G10310.1 vs. ExPASy Swiss-Prot
Match: P02519 (17.3 kDa class I heat shock protein OS=Glycine max OX=3847 GN=HSP17.3-B PE=3 SV=1) HSP 1 Score: 228.8 bits (582), Expect = 4.3e-59 Identity = 111/154 (72.08%), Postives = 138/154 (89.61%), Query Frame = 0
BLAST of CSPI05G10310.1 vs. ExPASy Swiss-Prot
Match: P27880 (18.2 kDa class I heat shock protein OS=Medicago sativa OX=3879 GN=HSP18.2 PE=2 SV=1) HSP 1 Score: 228.4 bits (581), Expect = 5.6e-59 Identity = 112/158 (70.89%), Postives = 141/158 (89.24%), Query Frame = 0
BLAST of CSPI05G10310.1 vs. ExPASy Swiss-Prot
Match: P19036 (17.4 kDa class I heat shock protein OS=Arabidopsis thaliana OX=3702 GN=HSP17.4A PE=1 SV=2) HSP 1 Score: 228.4 bits (581), Expect = 5.6e-59 Identity = 109/157 (69.43%), Postives = 138/157 (87.90%), Query Frame = 0
BLAST of CSPI05G10310.1 vs. ExPASy TrEMBL
Match: A0A0A0KQF0 (Chloroplast small heat shock protein class I OS=Cucumis sativus OX=3659 GN=Csa_5G198120 PE=3 SV=1) HSP 1 Score: 307.0 bits (785), Expect = 4.6e-80 Identity = 154/156 (98.72%), Postives = 156/156 (100.00%), Query Frame = 0
BLAST of CSPI05G10310.1 vs. ExPASy TrEMBL
Match: A0A0A0KP10 (SHSP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G190530 PE=3 SV=1) HSP 1 Score: 283.1 bits (723), Expect = 7.1e-73 Identity = 147/159 (92.45%), Postives = 150/159 (94.34%), Query Frame = 0
BLAST of CSPI05G10310.1 vs. ExPASy TrEMBL
Match: A0A5A7VKE4 (17.8 kDa class I heat shock protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold384G002830 PE=3 SV=1) HSP 1 Score: 268.9 bits (686), Expect = 1.4e-68 Identity = 139/159 (87.42%), Postives = 147/159 (92.45%), Query Frame = 0
BLAST of CSPI05G10310.1 vs. ExPASy TrEMBL
Match: A0A1S3CLZ4 (17.8 kDa class I heat shock protein-like OS=Cucumis melo OX=3656 GN=LOC103502478 PE=3 SV=1) HSP 1 Score: 268.9 bits (686), Expect = 1.4e-68 Identity = 139/159 (87.42%), Postives = 147/159 (92.45%), Query Frame = 0
BLAST of CSPI05G10310.1 vs. ExPASy TrEMBL
Match: A0A5A7UAZ9 (17.8 kDa class I heat shock protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold101G00300 PE=3 SV=1) HSP 1 Score: 265.8 bits (678), Expect = 1.2e-67 Identity = 134/159 (84.28%), Postives = 149/159 (93.71%), Query Frame = 0
BLAST of CSPI05G10310.1 vs. NCBI nr
Match: XP_004150236.3 (17.3 kDa class I heat shock protein [Cucumis sativus] >KAE8648013.1 hypothetical protein Csa_021403 [Cucumis sativus]) HSP 1 Score: 308.9 bits (790), Expect = 2.5e-80 Identity = 155/156 (99.36%), Postives = 156/156 (100.00%), Query Frame = 0
BLAST of CSPI05G10310.1 vs. NCBI nr
Match: XP_011654976.2 (17.8 kDa class I heat shock protein [Cucumis sativus]) HSP 1 Score: 282.7 bits (722), Expect = 1.9e-72 Identity = 146/159 (91.82%), Postives = 150/159 (94.34%), Query Frame = 0
BLAST of CSPI05G10310.1 vs. NCBI nr
Match: KAE8648011.1 (hypothetical protein Csa_021429 [Cucumis sativus]) HSP 1 Score: 282.7 bits (722), Expect = 1.9e-72 Identity = 146/159 (91.82%), Postives = 150/159 (94.34%), Query Frame = 0
BLAST of CSPI05G10310.1 vs. NCBI nr
Match: XP_038892388.1 (17.8 kDa class I heat shock protein-like [Benincasa hispida] >XP_038892768.1 17.8 kDa class I heat shock protein-like [Benincasa hispida]) HSP 1 Score: 270.0 bits (689), Expect = 1.3e-68 Identity = 136/159 (85.53%), Postives = 150/159 (94.34%), Query Frame = 0
BLAST of CSPI05G10310.1 vs. NCBI nr
Match: XP_008464642.1 (PREDICTED: 17.8 kDa class I heat shock protein-like [Cucumis melo] >KAA0066886.1 17.8 kDa class I heat shock protein-like [Cucumis melo var. makuwa] >TYK28033.1 17.8 kDa class I heat shock protein-like [Cucumis melo var. makuwa]) HSP 1 Score: 268.9 bits (686), Expect = 2.8e-68 Identity = 139/159 (87.42%), Postives = 147/159 (92.45%), Query Frame = 0
BLAST of CSPI05G10310.1 vs. TAIR 10
Match: AT1G53540.1 (HSP20-like chaperones superfamily protein ) HSP 1 Score: 230.7 bits (587), Expect = 8.0e-61 Identity = 111/157 (70.70%), Postives = 137/157 (87.26%), Query Frame = 0
BLAST of CSPI05G10310.1 vs. TAIR 10
Match: AT3G46230.1 (heat shock protein 17.4 ) HSP 1 Score: 228.4 bits (581), Expect = 4.0e-60 Identity = 109/157 (69.43%), Postives = 138/157 (87.90%), Query Frame = 0
BLAST of CSPI05G10310.1 vs. TAIR 10
Match: AT5G59720.1 (heat shock protein 18.2 ) HSP 1 Score: 221.9 bits (564), Expect = 3.7e-58 Identity = 110/159 (69.18%), Postives = 137/159 (86.16%), Query Frame = 0
BLAST of CSPI05G10310.1 vs. TAIR 10
Match: AT2G29500.1 (HSP20-like chaperones superfamily protein ) HSP 1 Score: 203.0 bits (515), Expect = 1.8e-52 Identity = 102/155 (65.81%), Postives = 129/155 (83.23%), Query Frame = 0
BLAST of CSPI05G10310.1 vs. TAIR 10
Match: AT1G07400.1 (HSP20-like chaperones superfamily protein ) HSP 1 Score: 200.7 bits (509), Expect = 8.9e-52 Identity = 102/157 (64.97%), Postives = 126/157 (80.25%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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