CSPI04G27190.2 (mRNA) Cucumber (PI 183967) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GGACTTTTTACATCAATTCGTGTTGGAAGCAGAAGAGGAATAATGGCGCTGATGAAAGGAGAACCCCTGTTGAGGAAGCTCGCCGTGTTCGCTGGGTACATCGTTCTTCCGGGAGCCATGGCCGCTGCTCTCATTTACTCTCCTCCCGATTACATCTACTCCAAGAAAGACGAGAAAGACGATAAGTCTTCCAAATAGGACTCTTTCCCCTTCTTTCACCGAATGGTTCGTCTCATCTTACTCCAGTAGGGTTACTGTTTTACATTTCATTCTTATTCTAAAATGTTGATAGACGATCTTATCTAAATATTGCATATTGAATGTTGATCTTATCTTGAATGAATGCTCGTTGTGGTTGCAATCAGCAATTGCACATTATGTTTCCTGTATCTGATAATCATCGATTACAAAATGGATAGTGGTTATATCTGATGGATTTATACCTGTATTTTCCTGATTTTGCTTAGTTTAGAAACTCGAGCGTACACTTTCCTCGTCGTTGTGATTGGGGCTTGTACAAAGCGTATTGAACTTGTCTCTTCATTTATTCCCCTTCTTCGGTTAACTTCTAGTTGATCTTTTCTTGATAATTCTGATTTGACTTCGCGTGAATTTAGACCGAATAGACTAGCTTTCGAAGGAATGAAAGCAGTAGGCTCTATAGATCCAATTTGCATCTGTTGCTTGAACAAACTAGGTTTAAGAGTGTTTATCTTTTCGTAGGATCATCATCTAGATGACCAGCCATGTAATGGGCCATATTAGTAGTTGATTATGCATTTATTGCTTGAACGTAAGGTTTCTTATTCTTGATTATAATCCACCCAACACGCGGAAAATTGCATGAACACTAGCCATCTATCCCCCGTGGGGTTTAAAGGCTGACTATCTGTGCTGCACGATAATTTCTGGATACCTTTTTTCTCGACATATGGATTTCAGAATAAGGCTTGAATTTTCAGAAACAAGTATTTGGGAATCACGCTGAATACTATATGTACATTATAAGCTTTGGTATTTGTTCTTTTATCTCCAACGCAATAAGTTGGAATTGGACTTGATTTTCTGTTTTCTTTTGATGCAGGATCGTCTGATCATGTAGGCTTGCATTTGCAGTGTTGTATTTCTCTTATGTTGATAATGGTGTGTACTGGACTTATTGTCATGTCTCAATAACTAGTCATTTGTCTTACTTTTGAGGCTTCGCCTTTGGAGAAATAATAAACTTTTTCCCTCTTCTTTTTCTCTTTATGTTTTTTGAAGAAATTCTATGAGATAATACATATCATTTGAAGTAGAGACTGAACCATGGAAGTGGGAACTTTATGGGATACATTACTCTAAATTTCATATGCTTATATGAAAATTTGAACAGTTATAAAATGCGGGAAATGAAGAATCCCCACGACCACACAAACCATACATATTTATTCACAGTTCACACAGTCCTAAAGTACTAACCCTTTGGTTCTGCCCACTGTCGAATTGAAATCAAAATTTCCACTTTTAGGTGACTTGGAGTGTTGACAATGACAGAGGATAAAGATGCTTCATGGAGAGATTATCATAGCAAATAATTAAAAAGCCACTCCCAACTGGGTTGACTGTTGAGTGTGTTAATAACAGGGAAAGAAGATACTTTGGAGCAGACCGA GGACTTTTTACATCAATTCGTGTTGGAAGCAGAAGAGGAATAATGGCGCTGATGAAAGGAGAACCCCTGTTGAGGAAGCTCGCCGTGTTCGCTGGGTACATCGTTCTTCCGGGAGCCATGGCCGCTGCTCTCATTTACTCTCCTCCCGATTACATCTACTCCAAGAAAGACGAGAAAGACGATAAGTCTTCCAAATAGGACTCTTTCCCCTTCTTTCACCGAATGGATCGTCTGATCATGTAGGCTTGCATTTGCAGTGTTGTATTTCTCTTATGTTGATAATGGTGACTTGGAGTGTTGACAATGACAGAGGATAAAGATGCTTCATGGAGAGATTATCATAGCAAATAATTAAAAAGCCACTCCCAACTGGGTTGACTGTTGAGTGTGTTAATAACAGGGAAAGAAGATACTTTGGAGCAGACCGA ATGGCGCTGATGAAAGGAGAACCCCTGTTGAGGAAGCTCGCCGTGTTCGCTGGGTACATCGTTCTTCCGGGAGCCATGGCCGCTGCTCTCATTTACTCTCCTCCCGATTACATCTACTCCAAGAAAGACGAGAAAGACGATAAGTCTTCCAAATAG MALMKGEPLLRKLAVFAGYIVLPGAMAAALIYSPPDYIYSKKDEKDDKSSK* Homology
BLAST of CSPI04G27190.2 vs. ExPASy TrEMBL
Match: A0A0A0L4N8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G664390 PE=4 SV=1) HSP 1 Score: 99.0 bits (245), Expect = 6.3e-18 Identity = 50/51 (98.04%), Postives = 51/51 (100.00%), Query Frame = 0
BLAST of CSPI04G27190.2 vs. ExPASy TrEMBL
Match: A0A6J5TUT5 (Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS10256 PE=4 SV=1) HSP 1 Score: 69.7 bits (169), Expect = 4.1e-09 Identity = 35/48 (72.92%), Postives = 38/48 (79.17%), Query Frame = 0
BLAST of CSPI04G27190.2 vs. ExPASy TrEMBL
Match: A0A2R6PZ99 (DNA helicase OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc23464 PE=4 SV=1) HSP 1 Score: 65.5 bits (158), Expect = 7.7e-08 Identity = 32/49 (65.31%), Postives = 36/49 (73.47%), Query Frame = 0
BLAST of CSPI04G27190.2 vs. ExPASy TrEMBL
Match: A0A6A4L8H6 (Uncharacterized protein (Fragment) OS=Rhododendron williamsianum OX=262921 GN=C3L33_11281 PE=4 SV=1) HSP 1 Score: 63.9 bits (154), Expect = 2.2e-07 Identity = 33/49 (67.35%), Postives = 37/49 (75.51%), Query Frame = 0
BLAST of CSPI04G27190.2 vs. ExPASy TrEMBL
Match: A0A5N6RC88 (Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_014130 PE=4 SV=1) HSP 1 Score: 63.2 bits (152), Expect = 3.8e-07 Identity = 29/40 (72.50%), Postives = 35/40 (87.50%), Query Frame = 0
BLAST of CSPI04G27190.2 vs. NCBI nr
Match: KGN55532.1 (hypothetical protein Csa_011995 [Cucumis sativus]) HSP 1 Score: 99.0 bits (245), Expect = 1.3e-17 Identity = 50/51 (98.04%), Postives = 51/51 (100.00%), Query Frame = 0
BLAST of CSPI04G27190.2 vs. NCBI nr
Match: KAG7037970.1 (hypothetical protein SDJN02_01603, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 76.3 bits (186), Expect = 9.0e-11 Identity = 36/44 (81.82%), Postives = 40/44 (90.91%), Query Frame = 0
BLAST of CSPI04G27190.2 vs. NCBI nr
Match: CAB4267529.1 (unnamed protein product [Prunus armeniaca] >CAB4298007.1 unnamed protein product [Prunus armeniaca]) HSP 1 Score: 69.7 bits (169), Expect = 8.4e-09 Identity = 35/48 (72.92%), Postives = 38/48 (79.17%), Query Frame = 0
BLAST of CSPI04G27190.2 vs. NCBI nr
Match: KAG2698054.1 (hypothetical protein I3760_07G133200 [Carya illinoinensis] >KAG6648250.1 hypothetical protein CIPAW_07G134400 [Carya illinoinensis] >KAG6704534.1 hypothetical protein I3842_07G137400 [Carya illinoinensis]) HSP 1 Score: 67.4 bits (163), Expect = 4.2e-08 Identity = 33/48 (68.75%), Postives = 37/48 (77.08%), Query Frame = 0
BLAST of CSPI04G27190.2 vs. NCBI nr
Match: KAG7971403.1 (hypothetical protein I3843_07G132200 [Carya illinoinensis]) HSP 1 Score: 66.6 bits (161), Expect = 7.1e-08 Identity = 33/48 (68.75%), Postives = 36/48 (75.00%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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