CSPI03G24630.1 (mRNA) Cucumber (PI 183967) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGGAATATTGCGAGGAGTTTGAGAAAGAGATTAGTGGATTAAGTCATTTGGAGGACGAGGCCAAGACCTGCAAAAAAAAACCAGATGTGGTGAAGTTTTTTTACAAGGGATACATCAATGAAGAACAACAGTACGTAATGATCAAGGGACAGAAAGTAGATGTTGGGCCTAACGCGATAAACGAGCTCTAAAGGTTAGAGAGTAAAGAAATTAGACATGCGATTTTCAAAAACCAAACAAAGCAAGACGTGGATGAAGCGTTGAAAAAAGTAGTCTGCTCCAAGACAAAATGGGATAAAATGTCTATAGGGACTTACCAAATACGGATGGGATTAATCTTCTTGCATAACCCAAACACGGATGCTAGCGTTTGGTTGGTCTTTGTGAAAAAGAAAATCATGTCGACTCGCCCGGATAGCACCATTTCTATGGACAAAATAATGCTCATCTATTGCATTATGGAAGAGATACCAGTGAACGTGGGCGAGATAATATGTAAGCATATTCTTGCATGGATCAAGCATCCCCATGACGGAAGACCCTTCCTGCACTTGATTGAGAAATTATGTTTAAAGGCATGTCTAGTATTAGAAAAGCTGTGAAGGATGGGATTTGTACCATCTCAACCCTTCACCATGTCATTGACATCAACAAAATAAAGTAAGGCTCAAACGCCTGAAGACGAAAAAGGAAAGTCAAATTAAGGTTGAAGACGTGGATGAGAGTAATGAAGAAGAGGAAAGTGAGGAAGATAATGTCTCATTAAAATGCAAGTGAAAAGGCGAGGAGTAAGAATTGAAAAAAGTAAAAACCTCTCAGGCCAAGGACTCTAAGGACCCATTCCCTCTCGTATCCACTAGTAGTCCTAAGAAGAAGTCCACCAATCCCTTCTCACCCATAAAATCCAAGTTCTCCAAAGCTATAAATTCTCAAACTCCTCCAAAAATCCAAACCCTTTAAATCCAAAATGCCCAAGCCACCCGTCAAAGTAATAACTATCCCCTTCCTTACCAAAGCAAGATTCCAACAAATGTCTTGCTATTATTGTATATAACCCAGCAATAGCATCTGCCTTGCGGCAAGAGGAAATTCCTCAAATTTTTGTCACAGTCGTGCCCAACCAAACCAAGTCATTCAGCCTTGAATCAAACCAAGAAATTTTTTCAAACTTTATTTTTGATCCAAGCGCGTTTTGACGCATTCAAGTAGTCTGAAAAAGCGACACTAAGCCCTAAGGTGTCACTAAGAAGGGAAGTTCGAAAGGATGATATTGATGACCCACTCCAAGAGGGAAAAGAAACTACCTCTATGGTAGATCGAGATAAGCGTCCCCTCACCGCCAAAATCAACTACTCAAGCCTCAACGCAAAATGCCAAGATGAAGGAATCAGTGAGAACGATGAAGAAGAAGTTGATGAAGCTTACAACTTCAAATTCATTGAAATGGATAAAAGATTTGAAGACGTAATTCAGTGTCACATTAATCTTCAAGAGATGCACTTGTTGAGTAAAAAACAACTATGTGATTTGGAACTCAAATGCGACAACGCAAATGGAAGCAGTCGACACAAATAG ATGGAGGAATATTGCGAGGAGTTTGAGAAAGAGATTAGTGGATTAAGTCATTTGGAGGACGAGGCCAAGACCTGCAAAAAAAAACCAGATGTGGTGAAGTTTTTTTACAAGGGATACATCAATGAAGAACAACAGTACGTAATGATCAAGGGACAGAAACAAGACGTGGATGAAGCGTTGAAAAAAGTAGTCTGCTCCAAGACAAAATGGGATAAAATGTCTATAGGGACTTACCAAATACGGATGGGATTAATCTTCTTGCATAACCCAAACACGGATGCTAGCGTTTGGTTGGTCTTTGTGAAAAAGAAAATCATGTCGACTCGCCCGGATAGCACCATTTCTATGGACAAAATAATGCTCATCTATTGCATTATGGAAGAGATACCAGTGAACGTGGGCGAGATAATATGTAAGCATATTCTTGCATGGATCAAGCATCCCCATGACGGAAGACCCTTCCTGCACTTGATTGAGAAATTATGTTTAAAGGCATGTCTAACGAAAAAGGAAAGTCAAATTAAGGTTGAAGACGTGGATGAGAGTAATGAAGAAGAGGAAAGTGAGGAAGATAATTCTGAAAAAGCGACACTAAGCCCTAAGGTGTCACTAAGAAGGGAAGTTCGAAAGGATGATATTGATGACCCACTCCAAGAGGGAAAAGAAACTACCTCTATGGTAGATCGAGATAAGCGTCCCCTCACCGCCAAAATCAACTACTCAAGCCTCAACGCAAAATGCCAAGATGAAGGAATCAGTGAGAACGATGAAGAAGAAGTTGATGAAGCTTACAACTTCAAATTCATTGAAATGGATAAAAGATTTGAAGACGTAATTCAGTGTCACATTAATCTTCAAGAGATGCACTTGTTGAGTAAAAAACAACTATGTGATTTGGAACTCAAATGCGACAACGCAAATGGAAGCAGTCGACACAAATAG ATGGAGGAATATTGCGAGGAGTTTGAGAAAGAGATTAGTGGATTAAGTCATTTGGAGGACGAGGCCAAGACCTGCAAAAAAAAACCAGATGTGGTGAAGTTTTTTTACAAGGGATACATCAATGAAGAACAACAGTACGTAATGATCAAGGGACAGAAACAAGACGTGGATGAAGCGTTGAAAAAAGTAGTCTGCTCCAAGACAAAATGGGATAAAATGTCTATAGGGACTTACCAAATACGGATGGGATTAATCTTCTTGCATAACCCAAACACGGATGCTAGCGTTTGGTTGGTCTTTGTGAAAAAGAAAATCATGTCGACTCGCCCGGATAGCACCATTTCTATGGACAAAATAATGCTCATCTATTGCATTATGGAAGAGATACCAGTGAACGTGGGCGAGATAATATGTAAGCATATTCTTGCATGGATCAAGCATCCCCATGACGGAAGACCCTTCCTGCACTTGATTGAGAAATTATGTTTAAAGGCATGTCTAACGAAAAAGGAAAGTCAAATTAAGGTTGAAGACGTGGATGAGAGTAATGAAGAAGAGGAAAGTGAGGAAGATAATTCTGAAAAAGCGACACTAAGCCCTAAGGTGTCACTAAGAAGGGAAGTTCGAAAGGATGATATTGATGACCCACTCCAAGAGGGAAAAGAAACTACCTCTATGGTAGATCGAGATAAGCGTCCCCTCACCGCCAAAATCAACTACTCAAGCCTCAACGCAAAATGCCAAGATGAAGGAATCAGTGAGAACGATGAAGAAGAAGTTGATGAAGCTTACAACTTCAAATTCATTGAAATGGATAAAAGATTTGAAGACGTAATTCAGTGTCACATTAATCTTCAAGAGATGCACTTGTTGAGTAAAAAACAACTATGTGATTTGGAACTCAAATGCGACAACGCAAATGGAAGCAGTCGACACAAATAG MEEYCEEFEKEISGLSHLEDEAKTCKKKPDVVKFFYKGYINEEQQYVMIKGQKQDVDEALKKVVCSKTKWDKMSIGTYQIRMGLIFLHNPNTDASVWLVFVKKKIMSTRPDSTISMDKIMLIYCIMEEIPVNVGEIICKHILAWIKHPHDGRPFLHLIEKLCLKACLTKKESQIKVEDVDESNEEEESEEDNSEKATLSPKVSLRREVRKDDIDDPLQEGKETTSMVDRDKRPLTAKINYSSLNAKCQDEGISENDEEEVDEAYNFKFIEMDKRFEDVIQCHINLQEMHLLSKKQLCDLELKCDNANGSSRHK* Homology
BLAST of CSPI03G24630.1 vs. ExPASy TrEMBL
Match: A0A0A0LAY9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G511970 PE=4 SV=1) HSP 1 Score: 620.5 bits (1599), Expect = 3.7e-174 Identity = 312/313 (99.68%), Postives = 312/313 (99.68%), Query Frame = 0
BLAST of CSPI03G24630.1 vs. ExPASy TrEMBL
Match: A0A5D3DVQ6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1142G00370 PE=4 SV=1) HSP 1 Score: 161.0 bits (406), Expect = 8.1e-36 Identity = 77/146 (52.74%), Postives = 107/146 (73.29%), Query Frame = 0
BLAST of CSPI03G24630.1 vs. ExPASy TrEMBL
Match: A0A5D3D2B5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold306G001360 PE=4 SV=1) HSP 1 Score: 153.7 bits (387), Expect = 1.3e-33 Identity = 83/174 (47.70%), Postives = 107/174 (61.49%), Query Frame = 0
BLAST of CSPI03G24630.1 vs. ExPASy TrEMBL
Match: A0A5D3D7L3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold416G00290 PE=4 SV=1) HSP 1 Score: 147.9 bits (372), Expect = 7.1e-32 Identity = 75/151 (49.67%), Postives = 98/151 (64.90%), Query Frame = 0
BLAST of CSPI03G24630.1 vs. ExPASy TrEMBL
Match: A0A5A7SRQ1 (Drebrin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold156G00660 PE=4 SV=1) HSP 1 Score: 144.8 bits (364), Expect = 6.0e-31 Identity = 102/253 (40.32%), Postives = 132/253 (52.17%), Query Frame = 0
BLAST of CSPI03G24630.1 vs. NCBI nr
Match: KAE8650748.1 (hypothetical protein Csa_017633 [Cucumis sativus]) HSP 1 Score: 238.0 bits (606), Expect = 1.1e-58 Identity = 120/121 (99.17%), Postives = 120/121 (99.17%), Query Frame = 0
BLAST of CSPI03G24630.1 vs. NCBI nr
Match: KAA0054837.1 (hypothetical protein E6C27_scaffold406G00150 [Cucumis melo var. makuwa] >TYK27771.1 hypothetical protein E5676_scaffold1142G00370 [Cucumis melo var. makuwa]) HSP 1 Score: 161.0 bits (406), Expect = 1.7e-35 Identity = 77/146 (52.74%), Postives = 107/146 (73.29%), Query Frame = 0
BLAST of CSPI03G24630.1 vs. NCBI nr
Match: KAA0041933.1 (hypothetical protein E6C27_scaffold67G003500 [Cucumis melo var. makuwa] >TYK17865.1 hypothetical protein E5676_scaffold306G001360 [Cucumis melo var. makuwa]) HSP 1 Score: 153.7 bits (387), Expect = 2.7e-33 Identity = 83/174 (47.70%), Postives = 107/174 (61.49%), Query Frame = 0
BLAST of CSPI03G24630.1 vs. NCBI nr
Match: KAA0057652.1 (hypothetical protein E6C27_scaffold43054G00260 [Cucumis melo var. makuwa] >TYK19535.1 hypothetical protein E5676_scaffold416G00290 [Cucumis melo var. makuwa]) HSP 1 Score: 147.9 bits (372), Expect = 1.5e-31 Identity = 75/151 (49.67%), Postives = 98/151 (64.90%), Query Frame = 0
BLAST of CSPI03G24630.1 vs. NCBI nr
Match: KAA0032726.1 (drebrin-like [Cucumis melo var. makuwa] >TYJ98758.1 drebrin-like [Cucumis melo var. makuwa]) HSP 1 Score: 144.8 bits (364), Expect = 1.2e-30 Identity = 102/253 (40.32%), Postives = 132/253 (52.17%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
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