CSPI03G23600.1 (mRNA) Cucumber (PI 183967) v1

Overview


Name	CSPI03G23600.1
Type	mRNA
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	Gag/pol protein
Location	Chr3: 20563838 .. 20568793 (-)
Sequence length	3426
RNA-Seq Expression	CSPI03G23600.1
Synteny	CSPI03G23600.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAATAGCTCAATAGTTCAACTTTTAGCTTCCGAAAAACTTAATGGCGATAATTATGCGGCTTGGAAATCAAATCTTAACACAATACTAGTGGTTGACGATTTAAGATTTGTCTTAACTGAGGAATGTCCTCAAAACCCTGCCTCTAATGCTAACCGAACTAGTCGGGATGCATATGATCGATGGATAAAAGCTAATGAAAAAGCCCGTGTCTACATTCTTGCCAGCATGTCTGATGTATTGGCAAAGAAACATGAATCCTTAGCCACGGCTAAAGAGATTATGGATTCATTAAGGGGAATGTTTGGGCAACCAGAATGGTCCTTAAGACACGAGGCAGTCAAATACATTTACACTAAGCGTATGAAGGAAGGGACCTCTGTTAGAGAACATGTTCTGGACATGATGATGCACTTCAACATCGCTGAAGTGAATGGTGGTCCCATCGAAGAGGTTAATCAAGTTAGTTTTATCTTAGAGTCTCTTCCGAAGAGCTTCATTCCATTCCAAACGAATGCGTCTTTGAACAAGATAGAATTTAACTTGACAACCCTTCTGAATGAACTCCAGCGATTCCAAAACCTAACTATGGGTAAAGGAAAACAAGTGGAAGCAAATGTTGCTACCACAAAAAGAAAATTTATAAGAGGATCGTCCTCTAAAACAAAAGCTAGACCCTCAAAACCTAATGCTCAAATAAAAAAGAAGGGAAAAGGAAAGACTCACAAACAGAACAAGGGTAAGAAAGTTGCATAAAAAGGTAAGTGTTATCATTGTGGCCAAAACGGGCACTGGTTAAGAAACTGCCCAAAATACCTTGCAGAAAAAAAGGCAGAGAAGGAAACACAAGGTAAATATGATTTACTAGTTGTAGAAACATGTTTAGGGGAATATGAAAATTGTACCTGGATACTAGATTCAGGAGCCACTAACCATATTTGCTTCTCATTTCAGGAAAATAGTTCTTGGAAAAAGCTTTCAGAAGGCGAGAACACTCTCAAGGTTGGAACAGGAGAGATGGTCTCAGCTTCAGCAGTGGGAGATTTAAAGTTGTTTTTACTTTTTAAAGATAGATATGTGATACTTAAGAATGTGTTATGTGTACCTCAAATGAGAAGAAATTTAATATCTATCTCTTGTATTTTCGAACAAATGAGAAGATATTCTAGTTTGTTATGTCATACTTGAAGACAACTTATATAAGTTAAGACCAACCAGAGCAACTTTTGTCTTAAATACTGAAATATTCAGAACAGTAGAAACTCAGAATAAAAGACAAAAGGTTTCTTCTAATGCCTATTTATGACACTTAAGACTTTGTCACATAAATCTCAATAGAATTGGGAGATTGGTTAAAAAAAAGTGGGCTTCTAAGTCAGTTAGAAAATAATACTTTACCTCCTTGTGAATCTTGTCTTGAAGGAAAAATGACCAAGAGATCTTTTACTGGAAAAGGTCTAAGAGCCAAAGGACCCTTAGAGCTCGTACATTCGGACCTTTGTGGACCAATGAATGTCAAAGCTCGAGGTGGATATGAATATTTCATTAGCTTCATTGATGATTATTCAAGGTATGGTCATATTTACCTAATACATCATAAGTCTAGTAGTCTTGAAAAGTTCAAACAATATAAGGCTGAAGTAGAAAACAAATTAGGTAAAACAATAAAAATACTTCGATCAGATCGAGGTGGAGAGTATATGGACTTACGATTCCGAGACTATTTAATAGAAAATGGAATCCAGTCACAACTCTTTGCATCTAGTACACCTCAACAGAACAGTGTATCAGAAAGAAGAAACCGGACCTTGTTAGACATGGTTTGCTCTATGATGAGTTTTTCTCAGATGCCAGATTCTTTTTGGAGATATGCTTTATAAACAGCTCCTTATATTTTGAATAATGTTCCCTCTAAAAGTGTTTCAGAATCTAAAAGTGTTTTCAGAAAAACCTTATGAGCTATGGAAAGGGCGTAAAGGAAGTTTACGTCATTTTAGAATTTGGGGTTGTCCAGCACACGTGTTGGTACAAAATCCTAAGAAATTGGAACATCGTTCAAAATTATGCTTTTTCATAGGTTATCCAAAAGAATCAAGAGGTGGTTTGTTTTATGATCCTCAAGAAAATAAAATATTTGTGTCAACTAATGCCACATTCTTAGAGGAAGACCATATCAGTGATCATCAACCTCGTAGTAAACTAGTATTAAAAGAAATTTCCAAAAGTGCTATAGATAAACCTAGTTCATCCACTAAGGTAGTTGATAAGACTAGGAAATCTGGTCAATCACATCCTTCTCAACAGTTGAGAGAGCCTCGACGTAGTGGGAGGGTTGTTCATCAGCCTGATCGCTATTTGGGTTTAATTGAAACTCAAGTCATCATTCCTAATGATGGCATAGAGGATCCATTAACCTATAAATAGGCAATGAAAGATGTAGATCGTGACCAATGGATCAAAGCCATGGACCTCGAAATGGAGTCTATGTACTTTAATTCTGTCTGGACTCTAGTAGATCAACCAAATGACGTAAAACCTATTGGTTGTAAATGGATCTACAAGAGAAAACGAGACCAAGCTGGTAAAGTACAGACTTTTAAGGCTCGACTTGTTGCAAAGGGTTATACTCAGAGAGAGGGAGTAGACTATGAGGAAACTCTATCTCCCGTTGCCATGCTAAAGTCAATTAGAATACTCTTATAAGTATATGGACTTACGATTCAAAGACTATTTGATAGAAAATGGAATCCAGTCACAACTCTCTGCACCTAGTACACCTCAACAGAACGGTGTAGCAGAAAGAAGAAACCGGACCTTGTTAGACATGGTTCGCTCTATGATGAGTTTTGCTCAGATGCCAGATTCTTTTTGGGGATATGCTTTAGAAACAGCTGCTTATATTTTGAATAATGTTCCCTCTAAAAGTGTTTCAGAAACACCTTATGAGCTATGGAAAGGGCGTAAAGGAAGTTTACGTCATTTTAGAATTTGGGGTTGTCCAGCACACGTGTTGGTACAAAATCCAAAGAAATTGGAACATCGTTCAAAATTATGCTTTTTCATAGGTTATCCAAAAGAATCAAGAGGTGGTTTGTTTTATGATCCTCAAGAAAATAAAATATTTGTGTCAACAAATGCCACATTCTTAGAGGAAGACCATATCAGTGATCATCAACCTCGTAGTAAACTAGTATTAAAAGAAATTTCCAAAAGTGCTATAGATAAACCTAGTTCATCCACTAAGGTAGTTGATAAGACTAGGAAATCTGGTCAATCACATCCTTCTCAACAGTTGAGAGAGCCTCGACGTAGTGGGAGGGTTGTTCATCAGCCTGATAACTATTTGGGTTTAATTGAAACTCAAGTCGTCATACCTGACGATGGCATAGAGGATCCATTAACCTATAAACAGGCAATGAAAGATGTAGATCGTGACCAATGGATCAAAGCCATGGACCTCGAAATGGAGTCTATGTACTTTAATTCTGTCTGGACTCTAGTAGATCAACCAAATGACGTAAAACCTATTGGTTGTAAATGGATCTACAAGAGAAAACGAGACCATGCCGGTAAAGTACAGACTTTTAAGGCTCGACTTGTGGCAAAGGGTTATACCCAGAGAGAGGGAGTAGACTATGAGGAAACTTTCTCTCCTGTTGCCATGTTAAAGTCAATTAGAATACTCTTATCCATCGCCACTTTTTATGATTATGAAATTTGGCAGATGGATGTCAAGACAGCTTTTTTGAATGGTAATCTTGAAGAGAGTATCTATATGTCTCAACCAGAGGGGTTTATAGAACAAGATCAAGAACAAAAGGTTTGTAAGCTTAAAAAATCCATTTATGGATTAAAACAAGCTTCTAGATCCTGGAATATAAGATTTGAGACTGCGATCAAATCTTATGGCTTTGAACAAAATGTTGACGAGCCTTGTGTTTACAAAAAGGTCGTCAATTCCATTGTAGCATTTTTAGTTTTATATGTAGATGATATTCTACTTATTGGAAATGACGTAGGATATCTTACTGATATCAAGAAATGGCTAGCTATGCAATTTCAAATGAAAGATCTGGGAGATGCACAATACGTTCTCGGAATCCAAATTGTTCGAAACCGTAAGAACAAAACACTAGCCATGTCTCAAGCATCTTACATAGACAAAATGTTGTCTAGATATAAAATGCAGAATTCCAAAAAGGGTCTGCTGCCGTACAGATATGGAATTCATTTGTCAAAGGAACAATGTCCTAAGACACCTCAAGAAGTTGAGGATATGAGAAATATTCCCTATGCTTCCGCTGTTGGAAGTTTAATGTATGCAATGTTATTACTAGACCTGACATTTGCTATTCAGTAGAGATGGTGAGTAGGTATCAATCCAATCCTGGACGTGATCACTGGACAGTCGTTAAAAATATTCTAAAATATCTTTGAAGAACAAAAGACTACATGCTCGTGTATGGTACAAAGGATCTTATCCTTATTGGATACACTGATTCAGATTTTCAAACTGATAAAGATGCTAGAAAGTCTACATCAGGATCAGTATTTACTCTAAATGGAGGAGCAGTAGTTTGGAGAAGCATAAAGCAAACTTGTATAGCTGATTCCACAATGGAAGCTGAATACGTAGCGGCTTGTGAAGCAGCAAAAGAAGCAGTATGGCTAAGAAAATTCTTGACAGATTTCGAAGTCGTTTCAAATATGCATCTACCAATCACTTTATACTATGACAACAGTGGTGCGGTTGCAAATTCAAGAGAACCTAGAAGCCATAAAAGAGGAAAGCATATTGAACGCAAGTACCATCTTATCAGGGAAATTGTACATCGTGGTGACGTTGTAGTAACCCAGATTTCTTCTCAGCAAAACATTGTTGTTCCTTTTACAAAAGTCATCACGGCTAAAGTGTTTGAGGGTCACCTACAAAGTTTAGGTCTACGATGTTTGTAA

mRNA sequence

ATGAATAGCTCAATAGTTCAACTTTTAGCTTCCGAAAAACTTAATGGCGATAATTATGCGGCTTGGAAATCAAATCTTAACACAATACTAGTGGTTGACGATTTAAGATTTGTCTTAACTGAGGAATGTCCTCAAAACCCTGCCTCTAATGCTAACCGAACTAGTCGGGATGCATATGATCGATGGATAAAAGCTAATGAAAAAGCCCGTGTCTACATTCTTGCCAGCATGTCTGATGTATTGGCAAAGAAACATGAATCCTTAGCCACGGCTAAAGAGATTATGGATTCATTAAGGGGAATGTTTGGGCAACCAGAATGGTCCTTAAGACACGAGGCAGTCAAATACATTTACACTAAGCGTATGAAGGAAGGGACCTCTGTTAGAGAACATGTTCTGGACATGATGATGCACTTCAACATCGCTGAAGTGAATGGTGGTCCCATCGAAGAGGTTAATCAAGTTAGTTTTATCTTAGAGTCTCTTCCGAAGAGCTTCATTCCATTCCAAACGAATGCGTCTTTGAACAAGATAGAATTTAACTTGACAACCCTTCTGAATGAACTCCAGCGATTCCAAAACCTAACTATGGGTAAAGGAAAACAAGTGGAAGCAAATGTTGCTACCACAAAAAGAAAATTTATAAGAGGATCGTCCTCTAAAACAAAAGCTAGACCCTCAAAACCTAATGCTCAAATAAAAAAGAAGGGAAAAGGAAAGACTCACAAACAGAACAAGGGTAAGTGTTATCATTGTGGCCAAAACGGGCACTGGTTAAGAAACTGCCCAAAATACCTTGCAGAAAAAAAGGCAGAGAAGGAAACACAAGGTAAATATGATTTACTAGTTGTAGAAACATGTTTAGGGGAATATGAAAATTGTACCTGGATACTAGATTCAGGAGCCACTAACCATATTTGCTTCTCATTTCAGGAAAATAGTTCTTGGAAAAAGCTTTCAGAAGGCGAGAACACTCTCAAGGTTGGAACAGGAGAGATGGTCTCAGCTTCAGCATTAGAAAATAATACTTTACCTCCTTGTGAATCTTGTCTTGAAGGAAAAATGACCAAGAGATCTTTTACTGGAAAAGGTCTAAGAGCCAAAGGACCCTTAGAGCTCGTACATTCGGACCTTTGTGGACCAATGAATGTCAAAGCTCGAGGTGGATATGAATATTTCATTAGCTTCATTGATGATTATTCAAGGTATGGTCATATTTACCTAATACATCATAAGTCTAGTAGTCTTGAAAAGTTCAAACAATATAAGGCTGAAGTAGAAAACAAATTAGGTAAAACAATAAAAATACTTCGATCAGATCGAGGTGGAGAGTATATGGACTTACGATTCCGAGACTATTTAATAGAAAATGGAATCCAGTCACAACTCTTTGCATCTAGTACACCTCAACAGAACAGTAACGGTGTAGCAGAAAGAAGAAACCGGACCTTGTTAGACATGGTTCGCTCTATGATGAGTTTTGCTCAGATGCCAGATTCTTTTTGGGGATATGCTTTAGAAACAGCTGCTTATATTTTGAATAATGTTCCCTCTAAAAGTGTTTCAGAAACACCTTATGAGCTATGGAAAGGGCGTAAAGGAAGTTTACGTCATTTTAGAATTTGGGGTTGTCCAGCACACGTGTTGGTACAAAATCCAAAGAAATTGGAACATCGTTCAAAATTATGCTTTTTCATAGGTTATCCAAAAGAATCAAGAGGTGGTTTGTTTTATGATCCTCAAGAAAATAAAATATTTGTGTCAACAAATGCCACATTCTTAGAGGAAGACCATATCAGTGATCATCAACCTCGTAGTAAACTAGTATTAAAAGAAATTTCCAAAAGTGCTATAGATAAACCTAGTTCATCCACTAAGGTAGTTGATAAGACTAGGAAATCTGGTCAATCACATCCTTCTCAACAGTTGAGAGAGCCTCGACGTAGTGGGAGGGTTGTTCATCAGCCTGATAACTATTTGGGTTTAATTGAAACTCAAGTCGTCATACCTGACGATGGCATAGAGGATCCATTAACCTATAAACAGGCAATGAAAGATGTAGATCGTGACCAATGGATCAAAGCCATGGACCTCGAAATGGAGTCTATGTACTTTAATTCTGTCTGGACTCTAGTAGATCAACCAAATGACGTAAAACCTATTGGTTGTAAATGGATCTACAAGAGAAAACGAGACCATGCCGGTAAAGTACAGACTTTTAAGGCTCGACTTGTGGCAAAGGGTTATACCCAGAGAGAGGGAGTAGACTATGAGGAAACTTTCTCTCCTGTTGCCATGTTAAAGTCAATTAGAATACTCTTATCCATCGCCACTTTTTATGATTATGAAATTTGGCAGATGGATGTCAAGACAGCTTTTTTGAATGGTAATCTTGAAGAGAGTATCTATATGTCTCAACCAGAGGGGTTTATAGAACAAGATCAAGAACAAAAGGTTTGTAAGCTTAAAAAATCCATTTATGGATTAAAACAAGCTTCTAGATCCTGGAATATAAGATTTGAGACTGCGATCAAATCTTATGGCTTTGAACAAAATGTTGACGAGCCTTGTGTTTACAAAAAGGTCGTCAATTCCATTGTAGCATTTTTAGTTTTATATGTAGATGATATTCTACTTATTGGAAATGACGTAGGATATCTTACTGATATCAAGAAATGGCTAGCTATGCAATTTCAAATGAAAGATCTGGGAGATGCACAATACGTTCTCGGAATCCAAATTGTTCGAAACCGTAAGAACAAAACACTAGCCATGTCTCAAGCATCTTACATAGACAAAATATATGGAATTCATTTGTCAAAGGAACAATGTCCTAAGACACCTCAAGAAGTTGAGGATATGAGAAATATTCCCTATGCTTCCGCTGTTGGAAGTTTAATGTATGCAATAACAAAAGACTACATGCTCGTGTATGGTACAAAGGATCTTATCCTTATTGGATACACTGATTCAGATTTTCAAACTGATAAAGATGCTAGAAAGTCTACATCAGGATCAGTATTTACTCTAAATGGAGGAGCAGTAGTTTGGAGAAGCATAAAGCAAACTTGTATAGCTGATTCCACAATGGAAGCTGAATACGTAGCGGCTTGTGAAGCAGCAAAAGAAGCAGTATGGCTAAGAAAATTCTTGACAGATTTCGAAGTCGTTTCAAATATGCATCTACCAATCACTTTATACTATGACAACAGTGGTGCGGTTGCAAATTCAAGAGAACCTAGAAGCCATAAAAGAGGAAAGCATATTGAACGCAAGTACCATCTTATCAGGGAAATTGTACATCGTGGTGACGTTGTAGTAACCCAGATTTCTTCTCAGCAAAACATTGTTGTTCCTTTTACAAAAGTCATCACGGCTAAAGTGTTTGAGGGTCACCTACAAAGTTTAGGTCTACGATGTTTGTAA

Coding sequence (CDS)

ATGAATAGCTCAATAGTTCAACTTTTAGCTTCCGAAAAACTTAATGGCGATAATTATGCGGCTTGGAAATCAAATCTTAACACAATACTAGTGGTTGACGATTTAAGATTTGTCTTAACTGAGGAATGTCCTCAAAACCCTGCCTCTAATGCTAACCGAACTAGTCGGGATGCATATGATCGATGGATAAAAGCTAATGAAAAAGCCCGTGTCTACATTCTTGCCAGCATGTCTGATGTATTGGCAAAGAAACATGAATCCTTAGCCACGGCTAAAGAGATTATGGATTCATTAAGGGGAATGTTTGGGCAACCAGAATGGTCCTTAAGACACGAGGCAGTCAAATACATTTACACTAAGCGTATGAAGGAAGGGACCTCTGTTAGAGAACATGTTCTGGACATGATGATGCACTTCAACATCGCTGAAGTGAATGGTGGTCCCATCGAAGAGGTTAATCAAGTTAGTTTTATCTTAGAGTCTCTTCCGAAGAGCTTCATTCCATTCCAAACGAATGCGTCTTTGAACAAGATAGAATTTAACTTGACAACCCTTCTGAATGAACTCCAGCGATTCCAAAACCTAACTATGGGTAAAGGAAAACAAGTGGAAGCAAATGTTGCTACCACAAAAAGAAAATTTATAAGAGGATCGTCCTCTAAAACAAAAGCTAGACCCTCAAAACCTAATGCTCAAATAAAAAAGAAGGGAAAAGGAAAGACTCACAAACAGAACAAGGGTAAGTGTTATCATTGTGGCCAAAACGGGCACTGGTTAAGAAACTGCCCAAAATACCTTGCAGAAAAAAAGGCAGAGAAGGAAACACAAGGTAAATATGATTTACTAGTTGTAGAAACATGTTTAGGGGAATATGAAAATTGTACCTGGATACTAGATTCAGGAGCCACTAACCATATTTGCTTCTCATTTCAGGAAAATAGTTCTTGGAAAAAGCTTTCAGAAGGCGAGAACACTCTCAAGGTTGGAACAGGAGAGATGGTCTCAGCTTCAGCATTAGAAAATAATACTTTACCTCCTTGTGAATCTTGTCTTGAAGGAAAAATGACCAAGAGATCTTTTACTGGAAAAGGTCTAAGAGCCAAAGGACCCTTAGAGCTCGTACATTCGGACCTTTGTGGACCAATGAATGTCAAAGCTCGAGGTGGATATGAATATTTCATTAGCTTCATTGATGATTATTCAAGGTATGGTCATATTTACCTAATACATCATAAGTCTAGTAGTCTTGAAAAGTTCAAACAATATAAGGCTGAAGTAGAAAACAAATTAGGTAAAACAATAAAAATACTTCGATCAGATCGAGGTGGAGAGTATATGGACTTACGATTCCGAGACTATTTAATAGAAAATGGAATCCAGTCACAACTCTTTGCATCTAGTACACCTCAACAGAACAGTAACGGTGTAGCAGAAAGAAGAAACCGGACCTTGTTAGACATGGTTCGCTCTATGATGAGTTTTGCTCAGATGCCAGATTCTTTTTGGGGATATGCTTTAGAAACAGCTGCTTATATTTTGAATAATGTTCCCTCTAAAAGTGTTTCAGAAACACCTTATGAGCTATGGAAAGGGCGTAAAGGAAGTTTACGTCATTTTAGAATTTGGGGTTGTCCAGCACACGTGTTGGTACAAAATCCAAAGAAATTGGAACATCGTTCAAAATTATGCTTTTTCATAGGTTATCCAAAAGAATCAAGAGGTGGTTTGTTTTATGATCCTCAAGAAAATAAAATATTTGTGTCAACAAATGCCACATTCTTAGAGGAAGACCATATCAGTGATCATCAACCTCGTAGTAAACTAGTATTAAAAGAAATTTCCAAAAGTGCTATAGATAAACCTAGTTCATCCACTAAGGTAGTTGATAAGACTAGGAAATCTGGTCAATCACATCCTTCTCAACAGTTGAGAGAGCCTCGACGTAGTGGGAGGGTTGTTCATCAGCCTGATAACTATTTGGGTTTAATTGAAACTCAAGTCGTCATACCTGACGATGGCATAGAGGATCCATTAACCTATAAACAGGCAATGAAAGATGTAGATCGTGACCAATGGATCAAAGCCATGGACCTCGAAATGGAGTCTATGTACTTTAATTCTGTCTGGACTCTAGTAGATCAACCAAATGACGTAAAACCTATTGGTTGTAAATGGATCTACAAGAGAAAACGAGACCATGCCGGTAAAGTACAGACTTTTAAGGCTCGACTTGTGGCAAAGGGTTATACCCAGAGAGAGGGAGTAGACTATGAGGAAACTTTCTCTCCTGTTGCCATGTTAAAGTCAATTAGAATACTCTTATCCATCGCCACTTTTTATGATTATGAAATTTGGCAGATGGATGTCAAGACAGCTTTTTTGAATGGTAATCTTGAAGAGAGTATCTATATGTCTCAACCAGAGGGGTTTATAGAACAAGATCAAGAACAAAAGGTTTGTAAGCTTAAAAAATCCATTTATGGATTAAAACAAGCTTCTAGATCCTGGAATATAAGATTTGAGACTGCGATCAAATCTTATGGCTTTGAACAAAATGTTGACGAGCCTTGTGTTTACAAAAAGGTCGTCAATTCCATTGTAGCATTTTTAGTTTTATATGTAGATGATATTCTACTTATTGGAAATGACGTAGGATATCTTACTGATATCAAGAAATGGCTAGCTATGCAATTTCAAATGAAAGATCTGGGAGATGCACAATACGTTCTCGGAATCCAAATTGTTCGAAACCGTAAGAACAAAACACTAGCCATGTCTCAAGCATCTTACATAGACAAAATATATGGAATTCATTTGTCAAAGGAACAATGTCCTAAGACACCTCAAGAAGTTGAGGATATGAGAAATATTCCCTATGCTTCCGCTGTTGGAAGTTTAATGTATGCAATAACAAAAGACTACATGCTCGTGTATGGTACAAAGGATCTTATCCTTATTGGATACACTGATTCAGATTTTCAAACTGATAAAGATGCTAGAAAGTCTACATCAGGATCAGTATTTACTCTAAATGGAGGAGCAGTAGTTTGGAGAAGCATAAAGCAAACTTGTATAGCTGATTCCACAATGGAAGCTGAATACGTAGCGGCTTGTGAAGCAGCAAAAGAAGCAGTATGGCTAAGAAAATTCTTGACAGATTTCGAAGTCGTTTCAAATATGCATCTACCAATCACTTTATACTATGACAACAGTGGTGCGGTTGCAAATTCAAGAGAACCTAGAAGCCATAAAAGAGGAAAGCATATTGAACGCAAGTACCATCTTATCAGGGAAATTGTACATCGTGGTGACGTTGTAGTAACCCAGATTTCTTCTCAGCAAAACATTGTTGTTCCTTTTACAAAAGTCATCACGGCTAAAGTGTTTGAGGGTCACCTACAAAGTTTAGGTCTACGATGTTTGTAA

Protein sequence

MNSSIVQLLASEKLNGDNYAAWKSNLNTILVVDDLRFVLTEECPQNPASNANRTSRDAYDRWIKANEKARVYILASMSDVLAKKHESLATAKEIMDSLRGMFGQPEWSLRHEAVKYIYTKRMKEGTSVREHVLDMMMHFNIAEVNGGPIEEVNQVSFILESLPKSFIPFQTNASLNKIEFNLTTLLNELQRFQNLTMGKGKQVEANVATTKRKFIRGSSSKTKARPSKPNAQIKKKGKGKTHKQNKGKCYHCGQNGHWLRNCPKYLAEKKAEKETQGKYDLLVVETCLGEYENCTWILDSGATNHICFSFQENSSWKKLSEGENTLKVGTGEMVSASALENNTLPPCESCLEGKMTKRSFTGKGLRAKGPLELVHSDLCGPMNVKARGGYEYFISFIDDYSRYGHIYLIHHKSSSLEKFKQYKAEVENKLGKTIKILRSDRGGEYMDLRFRDYLIENGIQSQLFASSTPQQNSNGVAERRNRTLLDMVRSMMSFAQMPDSFWGYALETAAYILNNVPSKSVSETPYELWKGRKGSLRHFRIWGCPAHVLVQNPKKLEHRSKLCFFIGYPKESRGGLFYDPQENKIFVSTNATFLEEDHISDHQPRSKLVLKEISKSAIDKPSSSTKVVDKTRKSGQSHPSQQLREPRRSGRVVHQPDNYLGLIETQVVIPDDGIEDPLTYKQAMKDVDRDQWIKAMDLEMESMYFNSVWTLVDQPNDVKPIGCKWIYKRKRDHAGKVQTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIYMSQPEGFIEQDQEQKVCKLKKSIYGLKQASRSWNIRFETAIKSYGFEQNVDEPCVYKKVVNSIVAFLVLYVDDILLIGNDVGYLTDIKKWLAMQFQMKDLGDAQYVLGIQIVRNRKNKTLAMSQASYIDKIYGIHLSKEQCPKTPQEVEDMRNIPYASAVGSLMYAITKDYMLVYGTKDLILIGYTDSDFQTDKDARKSTSGSVFTLNGGAVVWRSIKQTCIADSTMEAEYVAACEAAKEAVWLRKFLTDFEVVSNMHLPITLYYDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVVVTQISSQQNIVVPFTKVITAKVFEGHLQSLGLRCL*

Homology

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BLAST of CSPI03G23600.1 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 578.6 bits (1490), Expect = 1.6e-163
Identity = 410/1336 (30.69%), Postives = 633/1336 (47.38%), Query Frame = 0


Query: 13   KLNGDN-YAAWKSNLNTILVVDDLRFVLTEECPQNPASNANRTSRDAYDRWIKANEKARV 72
            K NGDN ++ W+  +  +L+   L  VL  +  +     A        + W   +E+A  
Sbjct: 10   KFNGDNGFSTWQRRMRDLLIQQGLHKVLDVDSKKPDTMKA--------EDWADLDERAAS 69

Query: 73   YILASMSDVLAKKHESLATAKEIMDSLRGMFGQPEWSLRHEAVKYIYTKRMKEGTSVREH 132
             I   +SD +        TA+ I   L  ++     + +    K +Y   M EGT+   H
Sbjct: 70   AIRLHLSDDVVNNIIDEDTARGIWTRLESLYMSKTLTNKLYLKKQLYALHMSEGTNFLSH 129

Query: 133  VLDMMMHFNIAEVNGGPIEEVNQVSFILESLPKSFIPFQTNASLNKIEFNLTTLLNELQR 192
            +             G  IEE ++   +L SLP S+    T     K    L  + + L  
Sbjct: 130  LNVFNGLITQLANLGVKIEEEDKAILLLNSLPSSYDNLATTILHGKTTIELKDVTSALLL 189

Query: 193  FQNLTMGKGKQVEANVATTKRKFIRGSSSKTKARPSKPNAQIKKKGKGKTHKQNKGKCYH 252
             + +      Q +A +   + +  + SS+       +  A+ K K + K+  +N   CY+
Sbjct: 190  NEKMRKKPENQGQALITEGRGRSYQRSSNNY----GRSGARGKSKNRSKSRVRN---CYN 249

Query: 253  CGQNGHWLRNCPKYLAEKKAEKETQGKYD-----LLV-----VETCLGEYENC------- 312
            C Q GH+ R+CP     +K + ET G+ +      +V     V   + E E C       
Sbjct: 250  CNQPGHFKRDCPN---PRKGKGETSGQKNDDNTAAMVQNNDNVVLFINEEEECMHLSGPE 309

Query: 313  -TWILDSGATNH----------------------------------ICF----------- 372
              W++D+ A++H                                  IC            
Sbjct: 310  SEWVVDTAASHHATPVRDLFCRYVAGDFGTVKMGNTSYSKIAGIGDICIKTNVGCTLVLK 369

Query: 373  ------------------------SFQENSSWKKLSEGENTLKVGT-------------- 432
                                    S+  N  W +L++G   +  G               
Sbjct: 370  DVRHVPDLRMNLISGIALDRDGYESYFANQKW-RLTKGSLVIAKGVARGTLYRTNAEICQ 429

Query: 433  GEMVSA------------------------------SALENNTLPPCESCLEGKMTKRSF 492
            GE+ +A                              S  +  T+ PC+ CL GK  + SF
Sbjct: 430  GELNAAQDEISVDLWHKRMGHMSEKGLQILAKKSLISYAKGTTVKPCDYCLFGKQHRVSF 489

Query: 493  TGKGLRAKGPLELVHSDLCGPMNVKARGGYEYFISFIDDYSRYGHIYLIHHKSSSLEKFK 552
                 R    L+LV+SD+CGPM +++ GG +YF++FIDD SR   +Y++  K    + F+
Sbjct: 490  QTSSERKLNILDLVYSDVCGPMEIESMGGNKYFVTFIDDASRKLWVYILKTKDQVFQVFQ 549

Query: 553  QYKAEVENKLGKTIKILRSDRGGEYMDLRFRDYLIENGIQSQLFASSTPQQNSNGVAERR 612
            ++ A VE + G+ +K LRSD GGEY    F +Y   +GI+ +     TPQ   NGVAER 
Sbjct: 550  KFHALVERETGRKLKRLRSDNGGEYTSREFEEYCSSHGIRHEKTVPGTPQH--NGVAERM 609

Query: 613  NRTLLDMVRSMMSFAQMPDSFWGYALETAAYILNNVPSKSVS-ETPYELWKGRKGSLRHF 672
            NRT+++ VRSM+  A++P SFWG A++TA Y++N  PS  ++ E P  +W  ++ S  H 
Sbjct: 610  NRTIVEKVRSMLRMAKLPKSFWGEAVQTACYLINRSPSVPLAFEIPERVWTNKEVSYSHL 669

Query: 673  RIWGCP--AHVLVQNPKKLEHRSKLCFFIGYPKESRGGLFYDPQENKIFVSTNATFLEED 732
            +++GC   AHV  +   KL+ +S  C FIGY  E  G   +DP + K+  S +  F E +
Sbjct: 670  KVFGCRAFAHVPKEQRTKLDDKSIPCIFIGYGDEEFGYRLWDPVKKKVIRSRDVVFRESE 729

Query: 733  -----HISDHQPRSKLVLKEISKSAIDKPSSSTKVVDKTRKSGQ---------------- 792
                  +S+      +       S  + P+S+    D+  + G+                
Sbjct: 730  VRTAADMSEKVKNGIIPNFVTIPSTSNNPTSAESTTDEVSEQGEQPGEVIEQGEQLDEGV 789

Query: 793  ---SHPSQ---QLREPRRSGRVVHQPDNYLGLIETQVVIPDDGIEDPLTYKQAMKDVDRD 852
                HP+Q   Q +  RRS R   +   Y       V+I DD   +P + K+ +   +++
Sbjct: 790  EEVEHPTQGEEQHQPLRRSERPRVESRRYPS--TEYVLISDD--REPESLKEVLSHPEKN 849

Query: 853  QWIKAMDLEMESMYFNSVWTLVDQPNDVKPIGCKWIYKRKRDHAGKVQTFKARLVAKGYT 912
            Q +KAM  EMES+  N  + LV+ P   +P+ CKW++K K+D   K+  +KARLV KG+ 
Sbjct: 850  QLMKAMQEEMESLQKNGTYKLVELPKGKRPLKCKWVFKLKKDGDCKLVRYKARLVVKGFE 909

Query: 913  QREGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIYMSQPEGF 972
            Q++G+D++E FSPV  + SIR +LS+A   D E+ Q+DVKTAFL+G+LEE IYM QPEGF
Sbjct: 910  QKKGIDFDEIFSPVVKMTSIRTILSLAASLDLEVEQLDVKTAFLHGDLEEEIYMEQPEGF 969

Query: 973  IEQDQEQKVCKLKKSIYGLKQASRSWNIRFETAIKSYGFEQNVDEPCVY-KKVVNSIVAF 1032
                ++  VCKL KS+YGLKQA R W ++F++ +KS  + +   +PCVY K+   +    
Sbjct: 970  EVAGKKHMVCKLNKSLYGLKQAPRQWYMKFDSFMKSQTYLKTYSDPCVYFKRFSENNFII 1029

Query: 1033 LVLYVDDILLIGNDVGYLTDIKKWLAMQFQMKDLGDAQYVLGIQIVRNRKNKTLAMSQAS 1092
            L+LYVDD+L++G D G +  +K  L+  F MKDLG AQ +LG++IVR R ++ L +SQ  
Sbjct: 1030 LLLYVDDMLIVGKDKGLIAKLKGDLSKSFDMKDLGPAQQILGMKIVRERTSRKLWLSQEK 1089

Query: 1093 YIDKIY-----------------GIHLSKEQCPKTPQEVEDMRNIPYASAVGSLMYAI-- 1131
            YI+++                   + LSK+ CP T +E  +M  +PY+SAVGSLMYA+  
Sbjct: 1090 YIERVLERFNMKNAKPVSTPLAGHLKLSKKMCPTTVEEKGNMAKVPYSSAVGSLMYAMVC 1149

[Close]

BLAST of CSPI03G23600.1 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 408.3 bits (1048), Expect = 2.9e-112
Identity = 365/1424 (25.63%), Postives = 612/1424 (42.98%), Query Frame = 0


Query: 15   NGDNYAAWKSNLNTILVVDDLRFVLTEECPQNPASNANRTSRDAYDRWIKANEKARVYIL 74
            +G+ YA WK  +  +L   D+  V+    P            +  D W KA   A+  I+
Sbjct: 12   DGEKYAIWKFRIRALLAEQDVLKVVDGLMP-----------NEVDDSWKKAERCAKSTII 71

Query: 75   ASMSDVLAKKHESLATAKEIMDSLRGMFGQPEWSLRHEAVKYIYTKRMKEGTSVRE--HV 134
              +SD       S  TA++I+++L  ++ +   + +    K + + ++    S+    H+
Sbjct: 72   EYLSDSFLNFATSDITARQILENLDAVYERKSLASQLALRKRLLSLKLSSEMSLLSHFHI 131

Query: 135  LDMMMHFNIAEVNGGPIEEVNQVSFILESLPKSFIPFQTNASLNKIEFNLTTLLNELQRF 194
             D ++   +A   G  IEE++++S +L +LP  +    T A     E NLT     L   
Sbjct: 132  FDELISELLAA--GAKIEEMDKISHLLITLPSCYDGIIT-AIETLSEENLT-----LAFV 191

Query: 195  QNLTMGKGKQVEANVATTKRKFIRG---SSSKTKARPSKPNAQIKKKGKGKTHKQNKGKC 254
            +N  + +  +++ +   T +K +     +++ T       N   K K   K + + K KC
Sbjct: 192  KNRLLDQEIKIKNDHNDTSKKVMNAIVHNNNNTYKNNLFKNRVTKPKKIFKGNSKYKVKC 251

Query: 255  YHCGQNGHWLRNCPKY---LAEKKAEKETQ-------GKYDLLVVETCLGEYENCTWILD 314
            +HCG+ GH  ++C  Y   L  K  E E Q       G   ++         +NC ++LD
Sbjct: 252  HHCGREGHIKKDCFHYKRILNNKNKENEKQVQTATSHGIAFMVKEVNNTSVMDNCGFVLD 311

Query: 315  SGATNHI----------------------------------------------------- 374
            SGA++H+                                                     
Sbjct: 312  SGASDHLINDESLYTDSVEVVPPLKIAVAKQGEFIYATKRGIVRLRNDHEITLEDVLFCK 371

Query: 375  ----------------------------------------------CFSFQENS------ 434
                                                            +FQ  S      
Sbjct: 372  EAAGNLMSVKRLQEAGMSIEFDKSGVTISKNGLMVVKNSGMLNNVPVINFQAYSINAKHK 431

Query: 435  ----SWKK----LSEGENTLKVGTGEMVSASALENN---TLPPCESCLEGKMTKRSFTGK 494
                 W +    +S+G+  L++    M S  +L NN   +   CE CL GK  +  F  K
Sbjct: 432  NNFRLWHERFGHISDGK-LLEIKRKNMFSDQSLLNNLELSCEICEPCLNGKQARLPF--K 491

Query: 495  GLR----AKGPLELVHSDLCGPMNVKARGGYEYFISFIDDYSRYGHIYLIHHKSSSLEKF 554
             L+     K PL +VHSD+CGP+         YF+ F+D ++ Y   YLI +KS     F
Sbjct: 492  QLKDKTHIKRPLFVVHSDVCGPITPVTLDDKNYFVIFVDQFTHYCVTYLIKYKSDVFSMF 551

Query: 555  KQYKAEVENKLGKTIKILRSDRGGEYMDLRFRDYLIENGIQSQLFASSTPQQNSNGVAER 614
            + + A+ E      +  L  D G EY+    R + ++ GI   L    TPQ   NGV+ER
Sbjct: 552  QDFVAKSEAHFNLKVVYLYIDNGREYLSNEMRQFCVKKGISYHLTVPHTPQ--LNGVSER 611

Query: 615  RNRTLLDMVRSMMSFAQMPDSFWGYALETAAYILNNVPSKSV---SETPYELWKGRKGSL 674
              RT+ +  R+M+S A++  SFWG A+ TA Y++N +PS+++   S+TPYE+W  +K  L
Sbjct: 612  MIRTITEKARTMVSGAKLDKSFWGEAVLTATYLINRIPSRALVDSSKTPYEMWHNKKPYL 671

Query: 675  RHFRIWGCPAHVLVQNPK-KLEHRSKLCFFIGYPKESRGGLFYDPQENKIFVSTNATFLE 734
            +H R++G   +V ++N + K + +S    F+GY  E  G   +D    K  V+ +    E
Sbjct: 672  KHLRVFGATVYVHIKNKQGKFDDKSFKSIFVGY--EPNGFKLWDAVNEKFIVARDVVVDE 731

Query: 735  EDHISDHQPRSKLVLKEISKSAIDK--PSSSTKVV------------------DKTRKSG 794
             + ++    + + V  + SK + +K  P+ S K++                  D      
Sbjct: 732  TNMVNSRAVKFETVFLKDSKESENKNFPNDSRKIIQTEFPNESKECDNIQFLKDSKESEN 791

Query: 795  QSHPS--------------------QQLREPRRSGRVV------HQPDNYLG-------- 854
            ++ P+                    Q L++ + S +         + D++L         
Sbjct: 792  KNFPNDSRKIIQTEFPNESKECDNIQFLKDSKESNKYFLNESKKRKRDDHLNESKGSGNP 851

Query: 855  ----LIETQVVIPDDGIEDP---------------------LTYKQ-------------- 914
                  ET   + + GI++P                     ++Y +              
Sbjct: 852  NESRESETAEHLKEIGIDNPTKNDGIEIINRRSERLKTKPQISYNEEDNSLNKVVLNAHT 911

Query: 915  AMKDV-----------DRDQWIKAMDLEMESMYFNSVWTLVDQPNDVKPIGCKWIYKRKR 974
               DV           D+  W +A++ E+ +   N+ WT+  +P +   +  +W++  K 
Sbjct: 912  IFNDVPNSFDEIQYRDDKSSWEEAINTELNAHKINNTWTITKRPENKNIVDSRWVFSVKY 971

Query: 975  DHAGKVQTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKT 1034
            +  G    +KARLVA+G+TQ+  +DYEETF+PVA + S R +LS+   Y+ ++ QMDVKT
Sbjct: 972  NELGNPIRYKARLVARGFTQKYQIDYEETFAPVARISSFRFILSLVIQYNLKVHQMDVKT 1031

Query: 1035 AFLNGNLEESIYMSQPEGFIEQDQEQKVCKLKKSIYGLKQASRSWNIRFETAIKSYGFEQ 1094
            AFLNG L+E IYM  P+G         VCKL K+IYGLKQA+R W   FE A+K   F  
Sbjct: 1032 AFLNGTLKEEIYMRLPQGI--SCNSDNVCKLNKAIYGLKQAARCWFEVFEQALKECEFVN 1091

Query: 1095 NVDEPCVY---KKVVNSIVAFLVLYVDDILLIGNDVGYLTDIKKWLAMQFQMKDLGDAQY 1139
            +  + C+Y   K  +N  + +++LYVDD+++   D+  + + K++L  +F+M DL + ++
Sbjct: 1092 SSVDRCIYILDKGNINENI-YVLLYVDDVVIATGDMTRMNNFKRYLMEKFRMTDLNEIKH 1151

[Close]

BLAST of CSPI03G23600.1 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 351.7 bits (901), Expect = 3.2e-95
Identity = 346/1467 (23.59%), Postives = 567/1467 (38.65%), Query Frame = 0


Query: 1    MNSSIVQLLASE--KLNGDNYAAWKSNLNTILVVDDLRFVLTEECPQNPA---SNANRTS 60
            +N++I+ +  S   KL   NY  W   ++ +    +L   L    P  PA   ++A    
Sbjct: 11   VNTNILNVNMSNVTKLTSTNYLMWSRQVHALFDGYELAGFLDGSTPMPPATIGTDAVPRV 70

Query: 61   RDAYDRWIKANEKARVYILASMSDVLAKKHESLATAKEIMDSLRGMFGQPEWSLRHEAVK 120
               Y RW + ++     IL ++S  +        TA +I ++LR ++  P +        
Sbjct: 71   NPDYTRWRRQDKLIYSAILGAISMSVQPAVSRATTAAQIWETLRKIYANPSYG------- 130

Query: 121  YIYTKRMKEGTSVREHV--LDMMMHFNIAEVNGGPIEEVNQVSFILESLPKSFIPFQTNA 180
                           HV  L  +  F+   + G P++   QV  +LE+LP  + P     
Sbjct: 131  ---------------HVTQLRFITRFDQLALLGKPMDHDEQVERVLENLPDDYKPVIDQI 190

Query: 181  SLNKIEFNLT----TLLNELQRFQNLTMGKGKQVEANVA------TTKRKFIRGSSSKTK 240
            +      +LT     L+N   +   L   +   + ANV       T + +  RG +    
Sbjct: 191  AAKDTPPSLTEIHERLINRESKLLALNSAEVVPITANVVTHRNTNTNRNQNNRGDNRNYN 250

Query: 241  ARPSKPNA-QIKKKGKGKTHKQNK---GKCYHCGQNGHWLRNCPKYLAEKKAEKETQGKY 300
               ++ N+ Q    G    ++Q K   G+C  C   GH  + CP+    +    + Q   
Sbjct: 251  NNNNRSNSWQPSSSGSRSDNRQPKPYLGRCQICSVQGHSAKRCPQLHQFQSTTNQQQSTS 310

Query: 301  DLLVVE-----TCLGEYENCTWILDSGATNHICFSFQENSSWKKLSEGENTL-------- 360
                 +          Y    W+LDSGAT+HI   F   S  +  + G++ +        
Sbjct: 311  PFTPWQPRANLAVNSPYNANNWLLDSGATHHITSDFNNLSFHQPYTGGDDVMIADGSTIP 370

Query: 361  ------------------------------------------------------------ 420
                                                                        
Sbjct: 371  ITHTGSASLPTSSRSLDLNKVLYVPNIHKNLISVYRLCNTNRVSVEFFPASFQVKDLNTG 430

Query: 421  ---------------KVGTGEMVSA--------------------------SALENNTLP 480
                            + + + VS                           S + N++LP
Sbjct: 431  VPLLQGKTKDELYEWPIASSQAVSMFASPCSKATHSSWHSRLGHPSLAILNSVISNHSLP 490

Query: 481  ---------PCESCLEGKMTKRSFTGKGLRAKGPLELVHSDLCGPMNVKARGGYEYFISF 540
                      C  C   K  K  F+   + +  PLE ++SD+     + +   Y Y++ F
Sbjct: 491  VLNPSHKLLSCSDCFINKSHKVPFSNSTITSSKPLEYIYSDVWS-SPILSIDNYRYYVIF 550

Query: 541  IDDYSRYGHIYLIHHKSSSLEKFKQYKAEVENKLGKTIKILRSDRGGEYMDLRFRDYLIE 600
            +D ++RY  +Y +  KS   + F  +K+ VEN+    I  L SD GGE++ L  RDYL +
Sbjct: 551  VDHFTRYTWLYPLKQKSQVKDTFIIFKSLVENRFQTRIGTLYSDNGGEFVVL--RDYLSQ 610

Query: 601  NGIQSQLFASSTPQQNSNGVAERRNRTLLDMVRSMMSFAQMPDSFWGYALETAAYILNNV 660
            +GI        TP+   NG++ER++R +++M  +++S A +P ++W YA   A Y++N +
Sbjct: 611  HGISHFTSPPHTPEH--NGLSERKHRHIVEMGLTLLSHASVPKTYWPYAFSVAVYLINRL 670

Query: 661  PSKSVS-ETPYELWKGRKGSLRHFRIWGCPAHVLVQ--NPKKLEHRSKLCFFIGYPKESR 720
            P+  +  ++P++   G+  +    +++GC  +  ++  N  KLE +SK C F+GY     
Sbjct: 671  PTPLLQLQSPFQKLFGQPPNYEKLKVFGCACYPWLRPYNRHKLEDKSKQCAFMGYSLTQS 730

Query: 721  GGLFYDPQENKIFVSTNATFLE---------------EDHISDHQPR---------SKLV 780
              L       +++ S +  F E               ++  SD  P          + LV
Sbjct: 731  AYLCLHIPTGRLYTSRHVQFDERCFPFSTTNFGVSTSQEQRSDSAPNWPSHTTLPTTPLV 790

Query: 781  L------------------------------KEISKSAIDKPSSSTKVV---DKTRKSGQ 840
            L                                +  S+I  PSSS       +  + + Q
Sbjct: 791  LPAPPCLGPHLDTSPRPPSSPSPLCTTQVSSSNLPSSSISSPSSSEPTAPSHNGPQPTAQ 850

Query: 841  SHPSQQ-------LREPRRSGRVVHQPDNYLGLIETQVVIP------------------- 900
             H +Q        L  P  +    + P+    L ++ +  P                   
Sbjct: 851  PHQTQNSNSNSPILNNPNPNSPSPNSPNQNSPLPQSPISSPHIPTPSTSISEPNSPSSSS 910

Query: 901  ---------------------------------DDGI----------------EDPLTYK 960
                                              DGI                 +P T  
Sbjct: 911  TSTPPLPPVLPAPPIIQVNAQAPVNTHSMATRAKDGIRKPNQKYSYATSLAANSEPRTAI 970

Query: 961  QAMKDVDRDQWIKAMDLEMESMYFNSVWTLV-DQPNDVKPIGCKWIYKRKRDHAGKVQTF 1020
            QAMKD   D+W +AM  E+ +   N  W LV   P  V  +GC+WI+ +K +  G +  +
Sbjct: 971  QAMKD---DRWRQAMGSEINAQIGNHTWDLVPPPPPSVTIVGCRWIFTKKFNSDGSLNRY 1030

Query: 1021 KARLVAKGYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEE 1080
            KARLVAKGY QR G+DY ETFSPV    SIRI+L +A    + I Q+DV  AFL G L +
Sbjct: 1031 KARLVAKGYNQRPGLDYAETFSPVIKSTSIRIVLGVAVDRSWPIRQLDVNNAFLQGTLTD 1090

Query: 1081 SIYMSQPEGFIEQDQEQKVCKLKKSIYGLKQASRSWNIRFETAIKSYGFEQNVDEPCVYK 1139
             +YMSQP GF+++D+   VC+L+K+IYGLKQA R+W +   T + + GF  ++ +  ++ 
Sbjct: 1091 EVYMSQPPGFVDKDRPDYVCRLRKAIYGLKQAPRAWYVELRTYLLTVGFVNSISDTSLFV 1150

[Close]

BLAST of CSPI03G23600.1 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 342.8 bits (878), Expect = 1.5e-92
Identity = 341/1469 (23.21%), Postives = 570/1469 (38.80%), Query Frame = 0


Query: 2    NSSIVQLLASE--KLNGDNYAAWKSNLNTILVVDDLRFVLTEECPQNPAS----NANRTS 61
            N+SI+ +  S   KL   NY  W   ++ +    +L   L       PA+     A R +
Sbjct: 12   NTSILNVNMSNVTKLTSTNYLMWSRQVHALFDGYELAGFLDGSTTMPPATIGTDAAPRVN 71

Query: 62   RDAYDRWIKANEKARVYILASMSDVLAKKHESLATAKEIMDSLRGMFGQPEWSLRHEAVK 121
             D Y RW + ++     +L ++S  +        TA +I ++LR ++  P +   H    
Sbjct: 72   PD-YTRWKRQDKLIYSAVLGAISMSVQPAVSRATTAAQIWETLRKIYANPSYG--HVTQL 131

Query: 122  YIYTKRMKEGT-SVREHVLDMMMHFNIAEVNGGPIEEVNQVSFILESLPKSFIPFQTNAS 181
                K+  +GT ++ +++  ++  F+   + G P++   QV  +LE+LP+ + P     +
Sbjct: 132  RTQLKQWTKGTKTIDDYMQGLVTRFDQLALLGKPMDHDEQVERVLENLPEEYKPVIDQIA 191

Query: 182  LNKIEFNLTTLLNELQRFQNLTMGKGKQV----------EANVATTKRKFIRGSSSKTKA 241
                   LT +   L   ++  +                  N  TT        +++   
Sbjct: 192  AKDTPPTLTEIHERLLNHESKILAVSSATVIPITANAVSHRNTTTTNNNNNGNRNNRYDN 251

Query: 242  RPSKPNAQIKKKGKGKTHKQNK------GKCYHCGQNGHWLRNCPK---YLAEKKAEKET 301
            R +  N++  ++     H  N       GKC  CG  GH  + C +   +L+   +++  
Sbjct: 252  RNNNNNSKPWQQSSTNFHPNNNQSKPYLGKCQICGVQGHSAKRCSQLQHFLSSVNSQQPP 311

Query: 302  ------QGKYDLLVVETCLGE-YENCTWILDSGATNHICFSFQENSSWKKLSEGENTL-- 361
                  Q + +L      LG  Y +  W+LDSGAT+HI   F   S  +  + G++ +  
Sbjct: 312  SPFTPWQPRANL-----ALGSPYSSNNWLLDSGATHHITSDFNNLSLHQPYTGGDDVMVA 371

Query: 362  ------------------------------------------------------------ 421
                                                                        
Sbjct: 372  DGSTIPISHTGSTSLSTKSRPLNLHNILYVPNIHKNLISVYRLCNANGVSVEFFPASFQV 431

Query: 422  ---------------------KVGTGEMVSA--------------------------SAL 481
                                  + + + VS                           S +
Sbjct: 432  KDLNTGVPLLQGKTKDELYEWPIASSQPVSLFASPSSKATHSSWHARLGHPAPSILNSVI 491

Query: 482  ENNTLP---------PCESCLEGKMTKRSFTGKGLRAKGPLELVHSDLCGPMNVKARGGY 541
             N +L           C  CL  K  K  F+   + +  PLE ++SD+     + +   Y
Sbjct: 492  SNYSLSVLNPSHKFLSCSDCLINKSNKVPFSQSTINSTRPLEYIYSDVWS-SPILSHDNY 551

Query: 542  EYFISFIDDYSRYGHIYLIHHKSSSLEKFKQYKAEVENKLGKTIKILRSDRGGEYMDLRF 601
             Y++ F+D ++RY  +Y +  KS   E F  +K  +EN+    I    SD GGE++ L  
Sbjct: 552  RYYVIFVDHFTRYTWLYPLKQKSQVKETFITFKNLLENRFQTRIGTFYSDNGGEFVAL-- 611

Query: 602  RDYLIENGIQSQLFASSTPQQNSNGVAERRNRTLLDMVRSMMSFAQMPDSFWGYALETAA 661
             +Y  ++GI        TP+   NG++ER++R +++   +++S A +P ++W YA   A 
Sbjct: 612  WEYFSQHGISHLTSPPHTPEH--NGLSERKHRHIVETGLTLLSHASIPKTYWPYAFAVAV 671

Query: 662  YILNNVPSKSVS-ETPYELWKGRKGSLRHFRIWGCPAHVLVQ--NPKKLEHRSKLCFFIG 721
            Y++N +P+  +  E+P++   G   +    R++GC  +  ++  N  KL+ +S+ C F+G
Sbjct: 672  YLINRLPTPLLQLESPFQKLFGTSPNYDKLRVFGCACYPWLRPYNQHKLDDKSRQCVFLG 731

Query: 722  YPKESRGGLFYDPQENKIFVSTNATF---------------------------------- 781
            Y       L    Q +++++S +  F                                  
Sbjct: 732  YSLTQSAYLCLHLQTSRLYISRHVRFDENCFPFSNYLATLSPVQEQRRESSCVWSPHTTL 791

Query: 782  ------LEEDHISD--------HQPRSKLVLKEISKSAIDKPSSST-------------- 841
                  L     SD          P +     ++S S +D   SS+              
Sbjct: 792  PTRTPVLPAPSCSDPHHAATPPSSPSAPFRNSQVSSSNLDSSFSSSFPSSPEPTAPRQNG 851

Query: 842  --KVVDKTRKSGQSHPS-----------------QQLREPRRSGR--------------- 901
                   T+   Q+H S                 Q L  P +S                 
Sbjct: 852  PQPTTQPTQTQTQTHSSQNTSQNNPTNESPSQLAQSLSTPAQSSSSSPSPTTSASSSSTS 911

Query: 902  ------VVHQPDNYLGLIETQVVIP----------DDGI----------------EDPLT 961
                  ++H P     ++      P            GI                 +P T
Sbjct: 912  PTPPSILIHPPPPLAQIVNNNNQAPLNTHSMGTRAKAGIIKPNPKYSLAVSLAAESEPRT 971

Query: 962  YKQAMKDVDRDQWIKAMDLEMESMYFNSVWTLV-DQPNDVKPIGCKWIYKRKRDHAGKVQ 1021
              QA+KD   ++W  AM  E+ +   N  W LV   P+ V  +GC+WI+ +K +  G + 
Sbjct: 972  AIQALKD---ERWRNAMGSEINAQIGNHTWDLVPPPPSHVTIVGCRWIFTKKYNSDGSLN 1031

Query: 1022 TFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGNL 1081
             +KARLVAKGY QR G+DY ETFSPV    SIRI+L +A    + I Q+DV  AFL G L
Sbjct: 1032 RYKARLVAKGYNQRPGLDYAETFSPVIKSTSIRIVLGVAVDRSWPIRQLDVNNAFLQGTL 1091

Query: 1082 EESIYMSQPEGFIEQDQEQKVCKLKKSIYGLKQASRSWNIRFETAIKSYGFEQNVDEPCV 1139
             + +YMSQP GFI++D+   VCKL+K++YGLKQA R+W +     + + GF  +V +  +
Sbjct: 1092 TDDVYMSQPPGFIDKDRPNYVCKLRKALYGLKQAPRAWYVELRNYLLTIGFVNSVSDTSL 1151

[Close]

BLAST of CSPI03G23600.1 vs. ExPASy Swiss-Prot
Match: Q12490 (Transposon Ty1-BL Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY1B-BL PE=1 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 1.4e-21
Identity = 74/266 (27.82%), Postives = 128/266 (48.12%), Query Frame = 0


Query: 347 CESCLEGKMTK-RSFTGKGLRAKG---PLELVHSDLCGPMNVKARGGYEYFISFIDDYSR 406
           C  CL GK TK R   G  L+ +    P + +H+D+ GP++   +    YFISF D+ ++
Sbjct: 637 CPDCLIGKSTKHRHIKGSRLKYQNSYEPFQYLHTDIFGPVHNLPKSAPSYFISFTDETTK 696

Query: 407 YGHIYLIH--HKSSSLEKFKQYKAEVENKLGKTIKILRSDRGGEYMDLRFRDYLIENGIQ 466
           +  +Y +H   + S L+ F    A ++N+   ++ +++ DRG EY +     +L +NGI 
Sbjct: 697 FRWVYPLHDRREDSILDVFTTILAFIKNQFQASVLVIQMDRGSEYTNRTLHKFLEKNGIT 756

Query: 467 SQLFASSTPQQNSNGVAERRNRTLLDMVRSMMSFAQMPDSFWGYALETAAYILNNVPSKS 526
                ++T    ++GVAER NRTLLD  R+ +  + +P+  W  A+E +  + N++ S  
Sbjct: 757 P--CYTTTADSRAHGVAERLNRTLLDDCRTQLQCSGLPNHLWFSAIEFSTIVRNSLASP- 816

Query: 527 VSETPYELWKGRKGSLRHFRI----------WGCPAHVLVQNPKKLEHRSKLCFFIGYP- 586
                    K +K + +H  +          +G P  V   NP    H   +  +  +P 
Sbjct: 817 ---------KSKKSARQHAGLAGLDISTLLPFGQPVIVNDHNPNSKIHPRGIPGYALHPS 876

Query: 587 KESRGGLFYDPQENKIFVSTNATFLE 596
           + S G + Y P   K   +TN   L+
Sbjct: 877 RNSYGYIIYLPSLKKTVDTTNYVILQ 890

[Close]

BLAST of CSPI03G23600.1 vs. ExPASy TrEMBL
Match: E2GK51 (Gag/pol protein (Fragment) OS=Bryonia dioica OX=3652 PE=4 SV=1)

HSP 1 Score: 1884.0 bits (4879), Expect = 0.0e+00
Identity = 971/1296 (74.92%), Postives = 1040/1296 (80.25%), Query Frame = 0


Query: 1    MNSSIVQLLASEKLNGDNYAAWKSNLNTILVVDDLRFVLTEECPQNPASNANRTSRDAYD 60
            MN+SIVQLLASEKLNGDNY+AWKSNLNTILVVDDLRFVLTEECPQ PA NANRT R+AYD
Sbjct: 1    MNTSIVQLLASEKLNGDNYSAWKSNLNTILVVDDLRFVLTEECPQAPALNANRTVREAYD 60

Query: 61   RWIKANEKARVYILASMSDVLAKKHESLATAKEIMDSLRGMFGQPEWSLRHEAVKYIYTK 120
            RW+KAN+KARVYILASM+DVLAKKH+S+ATAK IMDSLR MFGQP WSLRHEA+K+IYTK
Sbjct: 61   RWVKANDKARVYILASMTDVLAKKHDSIATAKGIMDSLREMFGQPSWSLRHEAIKHIYTK 120

Query: 121  RMKEGTSVREHVLDMMMHFNIAEVNGGPIEEVNQVSFILESLPKSFIPFQTNASLNKIEF 180
            RMKEGTSVREHVLDMMMHFNIAEVNGGPI+E NQVSFIL+SLPKSF+PFQTNASLNKIEF
Sbjct: 121  RMKEGTSVREHVLDMMMHFNIAEVNGGPIDEANQVSFILQSLPKSFVPFQTNASLNKIEF 180

Query: 181  NLTTLLNELQRFQNLTMGKGKQVEANVATTKRKFIRGSSSKTKARPSKPNAQIKKKGKGK 240
            NLTTLLNELQRFQNLT+ KGK+VEANVA TKRKFIRGSSSK K  PSK  AQ+KKKGKGK
Sbjct: 181  NLTTLLNELQRFQNLTLSKGKEVEANVAVTKRKFIRGSSSKNKVGPSK--AQMKKKGKGK 240

Query: 241  T-------HKQNKGKCYHCGQNGHWLRNCPKYLAEKKAEKETQGKYDLLVVETCLGEYEN 300
                       +KGKC+HC Q+GHW RNCPKYLAEKKAEK TQGKYDLLVVETCL E + 
Sbjct: 241  APNTSKVKKNADKGKCFHCNQDGHWKRNCPKYLAEKKAEKATQGKYDLLVVETCLVECDA 300

Query: 301  CTWILDSGATNHICFSFQENSSWKKLSEGENTLKVGTGEMVSASA--------------- 360
             TWILDSGATNHICFSFQE SSWKKL EGE TLKVGTGE+VSA A               
Sbjct: 301  STWILDSGATNHICFSFQETSSWKKLKEGEITLKVGTGEVVSAEAVGDLTLFFQDRYLIL 360

Query: 361  ------------------------------------------------------------ 420
                                                                        
Sbjct: 361  KDVLYVPLMKRNLISIACILEHIYTISFEVNEVFILCKGIQICSAIRENNLYKLRPTRAN 420

Query: 421  --------------------------------------------------LENNTLPPCE 480
                                                              LE+N+LPPCE
Sbjct: 421  VVLNTEMFRTLETQNKKQKVSSNAYLWHLRLGHINLNRIERLVKSGILNQLEDNSLPPCE 480

Query: 481  SCLEGKMTKRSFTGKGLRAKGPLELVHSDLCGPMNVKARGGYEYFISFIDDYSRYGHIYL 540
            SCLEGKMTKRSFTGKGLRAK PLELVHSDLCGPMNVKARGGYEYFISFIDD+SRYGH+YL
Sbjct: 481  SCLEGKMTKRSFTGKGLRAKVPLELVHSDLCGPMNVKARGGYEYFISFIDDFSRYGHVYL 540

Query: 541  IHHKSSSLEKFKQYKAEVENKLGKTIKILRSDRGGEYMDLRFRDYLIENGIQSQLFASST 600
            +HHKS S EKFK+YKAEVEN++GKTIK LRSDRGGEYMD +F+DYLIE GIQSQL A ST
Sbjct: 541  LHHKSESFEKFKEYKAEVENEIGKTIKTLRSDRGGEYMDSKFQDYLIEFGIQSQLSAPST 600

Query: 601  PQQNSNGVAERRNRTLLDMVRSMMSFAQMPDSFWGYALETAAYILNNVPSKSVSETPYEL 660
            PQQ  NGV+ERRNRTLLDMVRSMMS+AQ+PDSFWGYALETA +ILNNVPSKSV ETPYEL
Sbjct: 601  PQQ--NGVSERRNRTLLDMVRSMMSYAQLPDSFWGYALETAIHILNNVPSKSVLETPYEL 660

Query: 661  WKGRKGSLRHFRIWGCPAHVLVQNPKKLEHRSKLCFFIGYPKESRGGLFYDPQENKIFVS 720
            WKGRK SLR+FRIWGCPAHVLVQNPKKLE RSKLC F+GYPKESRGGLFY PQENK+FVS
Sbjct: 661  WKGRKSSLRYFRIWGCPAHVLVQNPKKLEPRSKLCLFVGYPKESRGGLFYHPQENKVFVS 720

Query: 721  TNATFLEEDHISDHQPRSKLVLKEISKSAIDKPSSSTKVVDKTRKSGQSHPSQQLREPRR 780
            TNATFLEEDH  +HQPRSK+VLKE+ K+A DKPSSSTKVVDK   S QSH SQ+LR PRR
Sbjct: 721  TNATFLEEDHXRNHQPRSKIVLKEMFKNATDKPSSSTKVVDKANISDQSHTSQELRVPRR 780

Query: 781  SGRVVHQPDNYLGLIETQVVIPDDGIEDPLTYKQAMKDVDRDQWIKAMDLEMESMYFNSV 840
            SGRVVHQP+ YLGL+ETQ++IPDDG+EDPLTYKQAM DVDRDQWIKAM+LEMESMYFNSV
Sbjct: 781  SGRVVHQPNRYLGLVETQIIIPDDGVEDPLTYKQAMNDVDRDQWIKAMNLEMESMYFNSV 840

Query: 841  WTLVDQPNDVKPIGCKWIYKRKRDHAGKVQTFKARLVAKGYTQREGVDYEETFSPVAMLK 900
            WTLVD P+DVKPIGCKWIYKRKRD AGKVQTFKARLVAKGYTQ+EGVDYEETFSPVAMLK
Sbjct: 841  WTLVDLPSDVKPIGCKWIYKRKRDQAGKVQTFKARLVAKGYTQKEGVDYEETFSPVAMLK 900

Query: 901  SIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIYMSQPEGFIEQDQEQKVCKLKKSIYG 960
            SIRILLSIATFY+YEIWQMDVKTAFLNGNLEESIYM QPEGFI QDQEQKVCKL+KSIYG
Sbjct: 901  SIRILLSIATFYNYEIWQMDVKTAFLNGNLEESIYMVQPEGFIAQDQEQKVCKLQKSIYG 960

Query: 961  LKQASRSWNIRFETAIKSYGFEQNVDEPCVYKKVVNSIVAFLVLYVDDILLIGNDVGYLT 1020
            LKQASRSWNIRF+TAIKSYGFEQNVDEPCVYKK+VNS+VAFL+LYVDDILLIGNDV YLT
Sbjct: 961  LKQASRSWNIRFDTAIKSYGFEQNVDEPCVYKKIVNSVVAFLILYVDDILLIGNDVEYLT 1020

Query: 1021 DIKKWLAMQFQMKDLGDAQYVLGIQIVRNRKNKTLAMSQASYIDKI-------------- 1080
            D+KKWL  QFQMKDLG+AQY+LGIQIVRNRKNKTLAMSQASYIDK+              
Sbjct: 1021 DVKKWLNTQFQMKDLGEAQYILGIQIVRNRKNKTLAMSQASYIDKVLSRYKMQNSKKGQL 1080

Query: 1081 ---YGIHLSKEQCPKTPQEVEDMRNIPYASAVGSLMYAI--------------------- 1110
               +GIHLSKEQCPKTPQEVEDMRNIPY+SAVGSLMYA+                     
Sbjct: 1081 PFRHGIHLSKEQCPKTPQEVEDMRNIPYSSAVGSLMYAMLCTRPDICYSVGIVSRYQSNP 1140

[Close]

BLAST of CSPI03G23600.1 vs. ExPASy TrEMBL
Match: A0A5A7SMH8 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold219G002560 PE=4 SV=1)

HSP 1 Score: 1630.2 bits (4220), Expect = 0.0e+00
Identity = 851/1342 (63.41%), Postives = 985/1342 (73.40%), Query Frame = 0


Query: 1    MNSSIVQLLASEKLNGDNYAAWKSNLNTILVVDDLRFVLTEECPQNPASNANRTSRDAYD 60
            M S+ + +LA++KLNG+NYA+WK+ +NT+L++DDLRFVL EECPQ PA+NA RT R+ Y+
Sbjct: 1    MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYE 60

Query: 61   RWIKANEKARVYILASMSDVLAKKHESLATAKEIMDSLRGMFGQPEWSLRHEAVKYIYTK 120
            RW KANEKAR YILAS+S+VLAKKHES+ TA+EIMDSL+ MFGQ  + ++H+A+KYIY  
Sbjct: 61   RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA 120

Query: 121  RMKEGTSVREHVLDMMMHFNIAEVNGGPIEEVNQVSFILESLPKSFIPFQTNASLNKIEF 180
            RM EG SVREHVL+MM+HFN+AE+NG  I+E +QVSFILESLP+SF+ F++NA +NKI +
Sbjct: 121  RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY 180

Query: 181  NLTTLLNELQRFQNLTMGKGKQVEANVATTKRKFIRGSSSKTKARPSKP-NAQIKKKGKG 240
             LTTLLNELQ F++L   KG++ EANVAT+ RKF RGS+S TK+ PS   N + KKK  G
Sbjct: 181  TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGG 240

Query: 241  KTHKQN-------------KGKCYHCGQNGHWLRNCPKYLAEKKAEKETQGKYDLLVVET 300
            + +K N             KG C+HC Q GHW RNCPKYLAEKK  K  QGKYDLLV+ET
Sbjct: 241  QGNKANLAAAKTTKKAKAAKGICFHCNQEGHWKRNCPKYLAEKK--KAKQGKYDLLVLET 300

Query: 301  CLGEYENCTWILDSGATNHICFSFQENSSWKKLSEGENTLKVGTGEMVSA---------- 360
            CL E ++  WI+DSGATNH+C SFQ  SSW++L  GE T++VGTG +VSA          
Sbjct: 301  CLVENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCL 360

Query: 361  ------------------------------------------------------------ 420
                                                                        
Sbjct: 361  QKSFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNGVEICSAKLENNLYV 420

Query: 421  ---------------------------------------------------------SAL 480
                                                                     S L
Sbjct: 421  LRSLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSEL 480

Query: 481  ENNTLPPCESCLEGKMTKRSFTGKGLRAKGPLELVHSDLCGPMNVKARGGYEYFISFIDD 540
            E N+LP CESCLEGKMTKR FTGKG RAK PLELVHSDLCGPMNVKARGG+EYFI+F DD
Sbjct: 481  EENSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDD 540

Query: 541  YSRYGHIYLIHHKSSSLEKFKQYKAEVENKLGKTIKILRSDRGGEYMDLRFRDYLIENGI 600
            YSRYG++YL+ HKS +LEKFK+YKAEVEN L KTIK  RSDRGGEYMDL+F++YL+E GI
Sbjct: 541  YSRYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGI 600

Query: 601  QSQLFASSTPQQNSNGVAERRNRTLLDMVRSMMSFAQMPDSFWGYALETAAYILNNVPSK 660
             SQL A  TPQQ  NGV+ERRNRTLLDMVRSMMS+A +P+SFWGYA++TA YILN VPSK
Sbjct: 601  VSQLSAPGTPQQ--NGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSK 660

Query: 661  SVSETPYELWKGRKGSLRHFRIWGCPAHVLVQNPKKLEHRSKLCFFIGYPKESRGGLFYD 720
            SVSETP +LW GRKGSLRHFRIWGCPAHVL  NPKKLE RSKLC F+GYPK +RGG FYD
Sbjct: 661  SVSETPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYD 720

Query: 721  PQENKIFVSTNATFLEEDHISDHQPRSKLVLKEISKS-------AIDKPSSSTKVVDKTR 780
            P++NK+FVSTNATFLEEDHI +H+PRSK+VL E+SK         +++PS+ T+VV    
Sbjct: 721  PKDNKVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVV-HVG 780

Query: 781  KSGQSHPSQQLREPRRSGRVVHQPDNYLGLIETQVVIPDDGIEDPLTYKQAMKDVDRDQW 840
             S ++H  Q LREPRRSGRV + P  Y+ L ET  VI D  IEDPLT+K+AM+DVD+D+W
Sbjct: 781  SSTRTHQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEW 840

Query: 841  IKAMDLEMESMYFNSVWTLVDQPNDVKPIGCKWIYKRKRDHAGKVQTFKARLVAKGYTQR 900
            IKAM+LE+ESMYFNSVW LVDQP+ VKPIGCKWIYKRKR   GKVQTFKARLVAKGYTQ 
Sbjct: 841  IKAMNLELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQV 900

Query: 901  EGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIYMSQPEGFIE 960
            EGVDYEETFSPVAMLKSIRILLSIA ++DYEIWQMDVKTAFLNGNLEE+IYM QPEGFI 
Sbjct: 901  EGVDYEETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFII 960

Query: 961  QDQEQKVCKLKKSIYGLKQASRSWNIRFETAIKSYGFEQNVDEPCVYKKVVNSIVAFLVL 1020
              QEQK+CKL +SIYGLKQASRSWNIRF+TAIKSYGF+Q VDEPCVYK+++N  VAFLVL
Sbjct: 961  PGQEQKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVL 1020

Query: 1021 YVDDILLIGNDVGYLTDIKKWLAMQFQMKDLGDAQYVLGIQIVRNRKNKTLAMSQASYID 1080
            YVDDILLIGND+G LTDIK+WLA QFQMKDLG+AQ+VLGIQI R+RKNK LA+SQASYID
Sbjct: 1021 YVDDILLIGNDIGLLTDIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYID 1080

Query: 1081 KI-----------------YGIHLSKEQCPKTPQEVEDMRNIPYASAVGSLMYAI----- 1140
            KI                 +G+ LSKEQCPKTPQ+VE+MR+IPYASAVGSLMYA+     
Sbjct: 1081 KIVVKYSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRP 1140

[Close]

BLAST of CSPI03G23600.1 vs. ExPASy TrEMBL
Match: A0A5D3CPJ6 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold119G00040 PE=4 SV=1)

HSP 1 Score: 1630.2 bits (4220), Expect = 0.0e+00
Identity = 851/1342 (63.41%), Postives = 985/1342 (73.40%), Query Frame = 0


Query: 1    MNSSIVQLLASEKLNGDNYAAWKSNLNTILVVDDLRFVLTEECPQNPASNANRTSRDAYD 60
            M S+ + +LA++KLNG+NYA+WK+ +NT+L++DDLRFVL EECPQ PA+NA RT R+ Y+
Sbjct: 1    MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYE 60

Query: 61   RWIKANEKARVYILASMSDVLAKKHESLATAKEIMDSLRGMFGQPEWSLRHEAVKYIYTK 120
            RW KANEKAR YILAS+S+VLAKKHES+ TA+EIMDSL+ MFGQ  + ++H+A+KYIY  
Sbjct: 61   RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA 120

Query: 121  RMKEGTSVREHVLDMMMHFNIAEVNGGPIEEVNQVSFILESLPKSFIPFQTNASLNKIEF 180
            RM EG SVREHVL+MM+HFN+AE+NG  I+E +QVSFILESLP+SF+ F++NA +NKI +
Sbjct: 121  RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY 180

Query: 181  NLTTLLNELQRFQNLTMGKGKQVEANVATTKRKFIRGSSSKTKARPSKP-NAQIKKKGKG 240
             LTTLLNELQ F++L   KG++ EANVAT+ RKF RGS+S TK+ PS   N + KKK  G
Sbjct: 181  TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGG 240

Query: 241  KTHKQN-------------KGKCYHCGQNGHWLRNCPKYLAEKKAEKETQGKYDLLVVET 300
            + +K N             KG C+HC Q GHW RNCPKYLAEKK  K  QGKYDLLV+ET
Sbjct: 241  QGNKANLAAAKTTKKTKAAKGICFHCNQEGHWKRNCPKYLAEKK--KAKQGKYDLLVLET 300

Query: 301  CLGEYENCTWILDSGATNHICFSFQENSSWKKLSEGENTLKVGTGEMVSA---------- 360
            CL E ++  WI+DSGATNH+C SFQ  SSW++L  GE T++VGTG +VSA          
Sbjct: 301  CLVENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCL 360

Query: 361  ------------------------------------------------------------ 420
                                                                        
Sbjct: 361  QKSFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNGVEICSAKLENNLYV 420

Query: 421  ---------------------------------------------------------SAL 480
                                                                     S L
Sbjct: 421  LRSLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSEL 480

Query: 481  ENNTLPPCESCLEGKMTKRSFTGKGLRAKGPLELVHSDLCGPMNVKARGGYEYFISFIDD 540
            E N+LP CESCLEGKMTKR FTGKG RAK PLELVHSDLCGPMNVKARGG+EYFI+F DD
Sbjct: 481  EENSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDD 540

Query: 541  YSRYGHIYLIHHKSSSLEKFKQYKAEVENKLGKTIKILRSDRGGEYMDLRFRDYLIENGI 600
            YSRYG++YL+ HKS +LEKFK+YKAEVEN L KTIK  RSDRGGEYMDL+F++YL+E GI
Sbjct: 541  YSRYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGI 600

Query: 601  QSQLFASSTPQQNSNGVAERRNRTLLDMVRSMMSFAQMPDSFWGYALETAAYILNNVPSK 660
             SQL A  TPQQ  NGV+ERRNRTLLDMVRSMMS+A +P+SFWGYA++TA YILN VPSK
Sbjct: 601  VSQLSAPGTPQQ--NGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSK 660

Query: 661  SVSETPYELWKGRKGSLRHFRIWGCPAHVLVQNPKKLEHRSKLCFFIGYPKESRGGLFYD 720
            SVSETP +LW GRKGSLRHFRIWGCPAHVL  NPKKLE RSKLC F+GYPK +RGG FYD
Sbjct: 661  SVSETPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYD 720

Query: 721  PQENKIFVSTNATFLEEDHISDHQPRSKLVLKEISKS-------AIDKPSSSTKVVDKTR 780
            P++NK+FVSTNATFLEEDHI +H+PRSK+VL E+SK         +++PS+ T+VV    
Sbjct: 721  PKDNKVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVV-HVG 780

Query: 781  KSGQSHPSQQLREPRRSGRVVHQPDNYLGLIETQVVIPDDGIEDPLTYKQAMKDVDRDQW 840
             S ++H  Q LREPRRSGRV + P  Y+ L ET  VI D  IEDPLT+K+AM+DVD+D+W
Sbjct: 781  SSTRTHQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEW 840

Query: 841  IKAMDLEMESMYFNSVWTLVDQPNDVKPIGCKWIYKRKRDHAGKVQTFKARLVAKGYTQR 900
            IKAM+LE+ESMYFNSVW LVDQP+ VKPIGCKWIYKRKR   GKVQTFKARLVAKGYTQ 
Sbjct: 841  IKAMNLELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQV 900

Query: 901  EGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIYMSQPEGFIE 960
            EGVDYEETFSPVAMLKSIRILLSIA ++DYEIWQMDVKTAFLNGNLEE+IYM QPEGFI 
Sbjct: 901  EGVDYEETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFII 960

Query: 961  QDQEQKVCKLKKSIYGLKQASRSWNIRFETAIKSYGFEQNVDEPCVYKKVVNSIVAFLVL 1020
              QEQK+CKL +SIYGLKQASRSWNIRF+TAIKSYGF+Q VDEPCVYK+++N  VAFLVL
Sbjct: 961  PGQEQKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVL 1020

Query: 1021 YVDDILLIGNDVGYLTDIKKWLAMQFQMKDLGDAQYVLGIQIVRNRKNKTLAMSQASYID 1080
            YVDDILLIGND+G LTDIK+WLA QFQMKDLG+AQ+VLGIQI R+RKNK LA+SQASYID
Sbjct: 1021 YVDDILLIGNDIGLLTDIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYID 1080

Query: 1081 KI-----------------YGIHLSKEQCPKTPQEVEDMRNIPYASAVGSLMYAI----- 1140
            KI                 +G+ LSKEQCPKTPQ+VE+MR+IPYASAVGSLMYA+     
Sbjct: 1081 KIVVKYSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRP 1140

[Close]

BLAST of CSPI03G23600.1 vs. ExPASy TrEMBL
Match: A0A5A7TZD7 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold264G001300 PE=4 SV=1)

HSP 1 Score: 1626.3 bits (4210), Expect = 0.0e+00
Identity = 852/1342 (63.49%), Postives = 984/1342 (73.32%), Query Frame = 0


Query: 1    MNSSIVQLLASEKLNGDNYAAWKSNLNTILVVDDLRFVLTEECPQNPASNANRTSRDAYD 60
            M S+ + +LA++KLNG+NYA+WK N NT+L++DDLRFVL EECPQ PA+NA RT R+ Y+
Sbjct: 1    MTSATLNMLAADKLNGNNYASWK-NTNTVLIIDDLRFVLVEECPQVPAANATRTVREPYE 60

Query: 61   RWIKANEKARVYILASMSDVLAKKHESLATAKEIMDSLRGMFGQPEWSLRHEAVKYIYTK 120
            RW KANEKAR YILAS+S+VLAKKHES+ TA+EIMDSL+ MFGQ  + ++H+A+KYIY  
Sbjct: 61   RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA 120

Query: 121  RMKEGTSVREHVLDMMMHFNIAEVNGGPIEEVNQVSFILESLPKSFIPFQTNASLNKIEF 180
            RM EG SVREHVL+MM+HFN+AE+NG  I+E +QVSFILESLP+SF+ F++NA +NKI +
Sbjct: 121  RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY 180

Query: 181  NLTTLLNELQRFQNLTMGKGKQVEANVATTKRKFIRGSSSKTKARPSKP-NAQIKKKGKG 240
             LTTLLNELQ F++L   KG++ EANVAT+ RKF RGS+S TK+ PS   N + KKK  G
Sbjct: 181  TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGG 240

Query: 241  KTHKQN-------------KGKCYHCGQNGHWLRNCPKYLAEKKAEKETQGKYDLLVVET 300
            + +K N             KG C+HC Q GHW RNCPKYLAEKK  K  QGKYDLLV+ET
Sbjct: 241  QGNKANLAAAKTTKKAKAAKGICFHCNQEGHWKRNCPKYLAEKK--KAKQGKYDLLVLET 300

Query: 301  CLGEYENCTWILDSGATNHICFSFQENSSWKKLSEGENTLKVGTGEMVSA---------- 360
            CL E ++  WI+DSGATNH+C SFQ  SSW++L  GE T++VGTG +VSA          
Sbjct: 301  CLVENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCL 360

Query: 361  ------------------------------------------------------------ 420
                                                                        
Sbjct: 361  QKSFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNGVEICSAKLENNLYV 420

Query: 421  ---------------------------------------------------------SAL 480
                                                                     S L
Sbjct: 421  LRSLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSEL 480

Query: 481  ENNTLPPCESCLEGKMTKRSFTGKGLRAKGPLELVHSDLCGPMNVKARGGYEYFISFIDD 540
            E N+LP CESCLEGKMTKR FTGKG RAK PLELVHSDLCGPMNVKARGG+EYFI+F DD
Sbjct: 481  EENSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDD 540

Query: 541  YSRYGHIYLIHHKSSSLEKFKQYKAEVENKLGKTIKILRSDRGGEYMDLRFRDYLIENGI 600
            YSRYG++YL+ HKS +LEKFK+YKAEVEN L KTIK  RSDRGGEYMDL+F++YL+E GI
Sbjct: 541  YSRYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGI 600

Query: 601  QSQLFASSTPQQNSNGVAERRNRTLLDMVRSMMSFAQMPDSFWGYALETAAYILNNVPSK 660
             SQL A  TPQQ  NGV+ERRNRTLLDMVRSMMS+A +P+SFWGYA++TA YILN VPSK
Sbjct: 601  VSQLSAPGTPQQ--NGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSK 660

Query: 661  SVSETPYELWKGRKGSLRHFRIWGCPAHVLVQNPKKLEHRSKLCFFIGYPKESRGGLFYD 720
            SVSETP +LW GRKGSLRHFRIWGCPAHVL  NPKKLE RSKLC F+GYPK +RGG FYD
Sbjct: 661  SVSETPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYD 720

Query: 721  PQENKIFVSTNATFLEEDHISDHQPRSKLVLKEISKS-------AIDKPSSSTKVVDKTR 780
            P++NK+FVSTNATFLEEDHI +H+PRSK+VL E+SK         +++PS+ T+VV    
Sbjct: 721  PKDNKVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVV-HVG 780

Query: 781  KSGQSHPSQQLREPRRSGRVVHQPDNYLGLIETQVVIPDDGIEDPLTYKQAMKDVDRDQW 840
             S ++H  Q LREPRRSGRV + P  Y+ L ET  VI D  IEDPLT+K+AM+DVD+D+W
Sbjct: 781  SSTRTHQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEW 840

Query: 841  IKAMDLEMESMYFNSVWTLVDQPNDVKPIGCKWIYKRKRDHAGKVQTFKARLVAKGYTQR 900
            IKAM+LE+ESMYFNSVW LVDQP+ VKPIGCKWIYKRKR   GKVQTFKARLVAKGYTQ 
Sbjct: 841  IKAMNLELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQV 900

Query: 901  EGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIYMSQPEGFIE 960
            EGVDYEETFSPVAMLKSIRILLSIA ++DYEIWQMDVKTAFLNGNLEE+IYM QPEGFI 
Sbjct: 901  EGVDYEETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFII 960

Query: 961  QDQEQKVCKLKKSIYGLKQASRSWNIRFETAIKSYGFEQNVDEPCVYKKVVNSIVAFLVL 1020
              QEQK+CKL +SIYGLKQASRSWNIRF+TAIKSYGF+Q VDEPCVYK+++N  VAFLVL
Sbjct: 961  PGQEQKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVL 1020

Query: 1021 YVDDILLIGNDVGYLTDIKKWLAMQFQMKDLGDAQYVLGIQIVRNRKNKTLAMSQASYID 1080
            YVDDILLIGND+G LTDIK+WLA QFQMKDLG+AQ+VLGIQI R+RKNK LA+SQASYID
Sbjct: 1021 YVDDILLIGNDIGLLTDIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYID 1080

Query: 1081 KI-----------------YGIHLSKEQCPKTPQEVEDMRNIPYASAVGSLMYAI----- 1140
            KI                 +G+ LSKEQCPKTPQ+VE+MR+IPYASAVGSLMYA+     
Sbjct: 1081 KIVVKYSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRP 1140

[Close]

BLAST of CSPI03G23600.1 vs. ExPASy TrEMBL
Match: A0A5A7TWB9 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold133G00310 PE=4 SV=1)

HSP 1 Score: 1606.7 bits (4159), Expect = 0.0e+00
Identity = 840/1330 (63.16%), Postives = 973/1330 (73.16%), Query Frame = 0


Query: 1    MNSSIVQLLASEKLNGDNYAAWKSNLNTILVVDDLRFVLTEECPQNPASNANRTSRDAYD 60
            M S+ + +LA++KLNG+NYA+WK+ +NT+L++DDLRFVL EECPQ PA+NA RT R+ Y+
Sbjct: 1    MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYE 60

Query: 61   RWIKANEKARVYILASMSDVLAKKHESLATAKEIMDSLRGMFGQPEWSLRHEAVKYIYTK 120
            RW KANEKAR YILAS+S+VLAKKHES+ TA+EIMDSL+ MFGQ  + ++H+A+KYIY  
Sbjct: 61   RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA 120

Query: 121  RMKEGTSVREHVLDMMMHFNIAEVNGGPIEEVNQVSFILESLPKSFIPFQTNASLNKIEF 180
            RM EG SVREHVL+MM+HFN+AE+NG  I+E +QVSFILESLP+SF+ F++NA +NKI +
Sbjct: 121  RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY 180

Query: 181  NLTTLLNELQRFQNLTMGKGKQVEANVATTKRKFIRGSSSKTKARPSKP-NAQIKKKGKG 240
             LTTLLNELQ F++L   KG++ EANVAT+ RKF RGS+S TK+ PS   N + KKK  G
Sbjct: 181  TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGG 240

Query: 241  KTHKQN-------------KGKCYHCGQNGHWLRNCPKYLAEKKAEKETQGKYDLLVVET 300
            + +K N             KG C+HC Q GHW RNCPKYLAEKK  K  QGKYDLLV+ET
Sbjct: 241  QGNKANLAAAKTTKKAKAAKGICFHCNQEGHWKRNCPKYLAEKK--KAKQGKYDLLVLET 300

Query: 301  CLGEYENCTWILDSGATNHICFSFQENSSWKKLSEGENTLKVGTGEMVSA---------- 360
            CL E ++  WI+DSGATNH+C SFQ  SSW++L  GE T++VGTG +VSA          
Sbjct: 301  CLVENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCL 360

Query: 361  ------------------------------------------------------------ 420
                                                                        
Sbjct: 361  QKSFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNGVEICSAKLENNLYV 420

Query: 421  ---------------------------------------------------------SAL 480
                                                                     S L
Sbjct: 421  LRSLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSEL 480

Query: 481  ENNTLPPCESCLEGKMTKRSFTGKGLRAKGPLELVHSDLCGPMNVKARGGYEYFISFIDD 540
            E N+LP CESCLEGKMTKR FTGKG RAK PLELVHSDLCGPMNVKARGG+EYFI+F DD
Sbjct: 481  EENSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDD 540

Query: 541  YSRYGHIYLIHHKSSSLEKFKQYKAEVENKLGKTIKILRSDRGGEYMDLRFRDYLIENGI 600
            YSRYG++YL+ HKS +LEKFK+YKAEVEN L KTIK  RSDRGGEYMDL+F++YL+E GI
Sbjct: 541  YSRYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGI 600

Query: 601  QSQLFASSTPQQNSNGVAERRNRTLLDMVRSMMSFAQMPDSFWGYALETAAYILNNVPSK 660
             SQL A  TPQQ  NGV+ERRNRTLLDMVRSMMS+A +P+SFWGYA++TA YILN VPSK
Sbjct: 601  VSQLSAPGTPQQ--NGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSK 660

Query: 661  SVSETPYELWKGRKGSLRHFRIWGCPAHVLVQNPKKLEHRSKLCFFIGYPKESRGGLFYD 720
            SVSETP +LW GRKGSLRHFRIWGCPAHVL  NPKKLE RSKLC F+GYPK +RGG FYD
Sbjct: 661  SVSETPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYD 720

Query: 721  PQENKIFVSTNATFLEEDHISDHQPRSKLVLKEISKS-------AIDKPSSSTKVVDKTR 780
            P++NK+FVSTNATFLEEDHI +H+PRSK+VL E+SK         +++PS+ T+VV    
Sbjct: 721  PKDNKVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVV-HVG 780

Query: 781  KSGQSHPSQQLREPRRSGRVVHQPDNYLGLIETQVVIPDDGIEDPLTYKQAMKDVDRDQW 840
             S ++H  Q LREPRRSGRV + P  Y+ L ET  VI D  IEDPLT+K+AM+DVD+D+W
Sbjct: 781  SSTRTHQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEW 840

Query: 841  IKAMDLEMESMYFNSVWTLVDQPNDVKPIGCKWIYKRKRDHAGKVQTFKARLVAKGYTQR 900
            IKAM+LE+ESMYFNSVW LVDQP+ VKPIGCKWIYKRKR   GKVQTFKARLVAKGYTQ 
Sbjct: 841  IKAMNLELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQV 900

Query: 901  EGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIYMSQPEGFIE 960
            EGVDYEETFSPVAMLKSIRILLSIA ++DYEIWQMDVKTAFLNGNLEE+IYM QPEGFI 
Sbjct: 901  EGVDYEETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFII 960

Query: 961  QDQEQKVCKLKKSIYGLKQASRSWNIRFETAIKSYGFEQNVDEPCVYKKVVNSIVAFLVL 1020
              QEQK+CKL +SIYGLKQASRSWNIRF+TAIKSYGF+Q VDEPCVYK+++N  VAFLVL
Sbjct: 961  PGQEQKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVL 1020

Query: 1021 YVDDILLIGNDVGYLTDIKKWLAMQFQMKDLGDAQYVLGIQIVRNRKNKTLAMSQASYID 1080
            YVDDILLIGND+G LTDIK+WLA QFQMKDLG+AQ+VLGIQI R+RKNK LA+SQASYID
Sbjct: 1021 YVDDILLIGNDIGLLTDIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYID 1080

Query: 1081 KI-----------------YGIHLSKEQCPKTPQEVEDMRNIPYASAVGSLMYAI----- 1128
            KI                 +G+ LSKEQCPKTPQ+VE+MR+IPYASAVGSLMYA+     
Sbjct: 1081 KIVVKYSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRP 1140

[Close]

BLAST of CSPI03G23600.1 vs. NCBI nr
Match: ADJ18449.1 (gag/pol protein, partial [Bryonia dioica])

HSP 1 Score: 1884.0 bits (4879), Expect = 0.0e+00
Identity = 971/1296 (74.92%), Postives = 1040/1296 (80.25%), Query Frame = 0


Query: 1    MNSSIVQLLASEKLNGDNYAAWKSNLNTILVVDDLRFVLTEECPQNPASNANRTSRDAYD 60
            MN+SIVQLLASEKLNGDNY+AWKSNLNTILVVDDLRFVLTEECPQ PA NANRT R+AYD
Sbjct: 1    MNTSIVQLLASEKLNGDNYSAWKSNLNTILVVDDLRFVLTEECPQAPALNANRTVREAYD 60

Query: 61   RWIKANEKARVYILASMSDVLAKKHESLATAKEIMDSLRGMFGQPEWSLRHEAVKYIYTK 120
            RW+KAN+KARVYILASM+DVLAKKH+S+ATAK IMDSLR MFGQP WSLRHEA+K+IYTK
Sbjct: 61   RWVKANDKARVYILASMTDVLAKKHDSIATAKGIMDSLREMFGQPSWSLRHEAIKHIYTK 120

Query: 121  RMKEGTSVREHVLDMMMHFNIAEVNGGPIEEVNQVSFILESLPKSFIPFQTNASLNKIEF 180
            RMKEGTSVREHVLDMMMHFNIAEVNGGPI+E NQVSFIL+SLPKSF+PFQTNASLNKIEF
Sbjct: 121  RMKEGTSVREHVLDMMMHFNIAEVNGGPIDEANQVSFILQSLPKSFVPFQTNASLNKIEF 180

Query: 181  NLTTLLNELQRFQNLTMGKGKQVEANVATTKRKFIRGSSSKTKARPSKPNAQIKKKGKGK 240
            NLTTLLNELQRFQNLT+ KGK+VEANVA TKRKFIRGSSSK K  PSK  AQ+KKKGKGK
Sbjct: 181  NLTTLLNELQRFQNLTLSKGKEVEANVAVTKRKFIRGSSSKNKVGPSK--AQMKKKGKGK 240

Query: 241  T-------HKQNKGKCYHCGQNGHWLRNCPKYLAEKKAEKETQGKYDLLVVETCLGEYEN 300
                       +KGKC+HC Q+GHW RNCPKYLAEKKAEK TQGKYDLLVVETCL E + 
Sbjct: 241  APNTSKVKKNADKGKCFHCNQDGHWKRNCPKYLAEKKAEKATQGKYDLLVVETCLVECDA 300

Query: 301  CTWILDSGATNHICFSFQENSSWKKLSEGENTLKVGTGEMVSASA--------------- 360
             TWILDSGATNHICFSFQE SSWKKL EGE TLKVGTGE+VSA A               
Sbjct: 301  STWILDSGATNHICFSFQETSSWKKLKEGEITLKVGTGEVVSAEAVGDLTLFFQDRYLIL 360

Query: 361  ------------------------------------------------------------ 420
                                                                        
Sbjct: 361  KDVLYVPLMKRNLISIACILEHIYTISFEVNEVFILCKGIQICSAIRENNLYKLRPTRAN 420

Query: 421  --------------------------------------------------LENNTLPPCE 480
                                                              LE+N+LPPCE
Sbjct: 421  VVLNTEMFRTLETQNKKQKVSSNAYLWHLRLGHINLNRIERLVKSGILNQLEDNSLPPCE 480

Query: 481  SCLEGKMTKRSFTGKGLRAKGPLELVHSDLCGPMNVKARGGYEYFISFIDDYSRYGHIYL 540
            SCLEGKMTKRSFTGKGLRAK PLELVHSDLCGPMNVKARGGYEYFISFIDD+SRYGH+YL
Sbjct: 481  SCLEGKMTKRSFTGKGLRAKVPLELVHSDLCGPMNVKARGGYEYFISFIDDFSRYGHVYL 540

Query: 541  IHHKSSSLEKFKQYKAEVENKLGKTIKILRSDRGGEYMDLRFRDYLIENGIQSQLFASST 600
            +HHKS S EKFK+YKAEVEN++GKTIK LRSDRGGEYMD +F+DYLIE GIQSQL A ST
Sbjct: 541  LHHKSESFEKFKEYKAEVENEIGKTIKTLRSDRGGEYMDSKFQDYLIEFGIQSQLSAPST 600

Query: 601  PQQNSNGVAERRNRTLLDMVRSMMSFAQMPDSFWGYALETAAYILNNVPSKSVSETPYEL 660
            PQQ  NGV+ERRNRTLLDMVRSMMS+AQ+PDSFWGYALETA +ILNNVPSKSV ETPYEL
Sbjct: 601  PQQ--NGVSERRNRTLLDMVRSMMSYAQLPDSFWGYALETAIHILNNVPSKSVLETPYEL 660

Query: 661  WKGRKGSLRHFRIWGCPAHVLVQNPKKLEHRSKLCFFIGYPKESRGGLFYDPQENKIFVS 720
            WKGRK SLR+FRIWGCPAHVLVQNPKKLE RSKLC F+GYPKESRGGLFY PQENK+FVS
Sbjct: 661  WKGRKSSLRYFRIWGCPAHVLVQNPKKLEPRSKLCLFVGYPKESRGGLFYHPQENKVFVS 720

Query: 721  TNATFLEEDHISDHQPRSKLVLKEISKSAIDKPSSSTKVVDKTRKSGQSHPSQQLREPRR 780
            TNATFLEEDH  +HQPRSK+VLKE+ K+A DKPSSSTKVVDK   S QSH SQ+LR PRR
Sbjct: 721  TNATFLEEDHXRNHQPRSKIVLKEMFKNATDKPSSSTKVVDKANISDQSHTSQELRVPRR 780

Query: 781  SGRVVHQPDNYLGLIETQVVIPDDGIEDPLTYKQAMKDVDRDQWIKAMDLEMESMYFNSV 840
            SGRVVHQP+ YLGL+ETQ++IPDDG+EDPLTYKQAM DVDRDQWIKAM+LEMESMYFNSV
Sbjct: 781  SGRVVHQPNRYLGLVETQIIIPDDGVEDPLTYKQAMNDVDRDQWIKAMNLEMESMYFNSV 840

Query: 841  WTLVDQPNDVKPIGCKWIYKRKRDHAGKVQTFKARLVAKGYTQREGVDYEETFSPVAMLK 900
            WTLVD P+DVKPIGCKWIYKRKRD AGKVQTFKARLVAKGYTQ+EGVDYEETFSPVAMLK
Sbjct: 841  WTLVDLPSDVKPIGCKWIYKRKRDQAGKVQTFKARLVAKGYTQKEGVDYEETFSPVAMLK 900

Query: 901  SIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIYMSQPEGFIEQDQEQKVCKLKKSIYG 960
            SIRILLSIATFY+YEIWQMDVKTAFLNGNLEESIYM QPEGFI QDQEQKVCKL+KSIYG
Sbjct: 901  SIRILLSIATFYNYEIWQMDVKTAFLNGNLEESIYMVQPEGFIAQDQEQKVCKLQKSIYG 960

Query: 961  LKQASRSWNIRFETAIKSYGFEQNVDEPCVYKKVVNSIVAFLVLYVDDILLIGNDVGYLT 1020
            LKQASRSWNIRF+TAIKSYGFEQNVDEPCVYKK+VNS+VAFL+LYVDDILLIGNDV YLT
Sbjct: 961  LKQASRSWNIRFDTAIKSYGFEQNVDEPCVYKKIVNSVVAFLILYVDDILLIGNDVEYLT 1020

Query: 1021 DIKKWLAMQFQMKDLGDAQYVLGIQIVRNRKNKTLAMSQASYIDKI-------------- 1080
            D+KKWL  QFQMKDLG+AQY+LGIQIVRNRKNKTLAMSQASYIDK+              
Sbjct: 1021 DVKKWLNTQFQMKDLGEAQYILGIQIVRNRKNKTLAMSQASYIDKVLSRYKMQNSKKGQL 1080

Query: 1081 ---YGIHLSKEQCPKTPQEVEDMRNIPYASAVGSLMYAI--------------------- 1110
               +GIHLSKEQCPKTPQEVEDMRNIPY+SAVGSLMYA+                     
Sbjct: 1081 PFRHGIHLSKEQCPKTPQEVEDMRNIPYSSAVGSLMYAMLCTRPDICYSVGIVSRYQSNP 1140

[Close]

BLAST of CSPI03G23600.1 vs. NCBI nr
Match: KAA0035879.1 (gag/pol protein [Cucumis melo var. makuwa] >KAA0044276.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0051221.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0051893.1 gag/pol protein [Cucumis melo var. makuwa] >TYK00551.1 gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 1630.2 bits (4220), Expect = 0.0e+00
Identity = 851/1342 (63.41%), Postives = 985/1342 (73.40%), Query Frame = 0


Query: 1    MNSSIVQLLASEKLNGDNYAAWKSNLNTILVVDDLRFVLTEECPQNPASNANRTSRDAYD 60
            M S+ + +LA++KLNG+NYA+WK+ +NT+L++DDLRFVL EECPQ PA+NA RT R+ Y+
Sbjct: 1    MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYE 60

Query: 61   RWIKANEKARVYILASMSDVLAKKHESLATAKEIMDSLRGMFGQPEWSLRHEAVKYIYTK 120
            RW KANEKAR YILAS+S+VLAKKHES+ TA+EIMDSL+ MFGQ  + ++H+A+KYIY  
Sbjct: 61   RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA 120

Query: 121  RMKEGTSVREHVLDMMMHFNIAEVNGGPIEEVNQVSFILESLPKSFIPFQTNASLNKIEF 180
            RM EG SVREHVL+MM+HFN+AE+NG  I+E +QVSFILESLP+SF+ F++NA +NKI +
Sbjct: 121  RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY 180

Query: 181  NLTTLLNELQRFQNLTMGKGKQVEANVATTKRKFIRGSSSKTKARPSKP-NAQIKKKGKG 240
             LTTLLNELQ F++L   KG++ EANVAT+ RKF RGS+S TK+ PS   N + KKK  G
Sbjct: 181  TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGG 240

Query: 241  KTHKQN-------------KGKCYHCGQNGHWLRNCPKYLAEKKAEKETQGKYDLLVVET 300
            + +K N             KG C+HC Q GHW RNCPKYLAEKK  K  QGKYDLLV+ET
Sbjct: 241  QGNKANLAAAKTTKKTKAAKGICFHCNQEGHWKRNCPKYLAEKK--KAKQGKYDLLVLET 300

Query: 301  CLGEYENCTWILDSGATNHICFSFQENSSWKKLSEGENTLKVGTGEMVSA---------- 360
            CL E ++  WI+DSGATNH+C SFQ  SSW++L  GE T++VGTG +VSA          
Sbjct: 301  CLVENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCL 360

Query: 361  ------------------------------------------------------------ 420
                                                                        
Sbjct: 361  QKSFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNGVEICSAKLENNLYV 420

Query: 421  ---------------------------------------------------------SAL 480
                                                                     S L
Sbjct: 421  LRSLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSEL 480

Query: 481  ENNTLPPCESCLEGKMTKRSFTGKGLRAKGPLELVHSDLCGPMNVKARGGYEYFISFIDD 540
            E N+LP CESCLEGKMTKR FTGKG RAK PLELVHSDLCGPMNVKARGG+EYFI+F DD
Sbjct: 481  EENSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDD 540

Query: 541  YSRYGHIYLIHHKSSSLEKFKQYKAEVENKLGKTIKILRSDRGGEYMDLRFRDYLIENGI 600
            YSRYG++YL+ HKS +LEKFK+YKAEVEN L KTIK  RSDRGGEYMDL+F++YL+E GI
Sbjct: 541  YSRYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGI 600

Query: 601  QSQLFASSTPQQNSNGVAERRNRTLLDMVRSMMSFAQMPDSFWGYALETAAYILNNVPSK 660
             SQL A  TPQQ  NGV+ERRNRTLLDMVRSMMS+A +P+SFWGYA++TA YILN VPSK
Sbjct: 601  VSQLSAPGTPQQ--NGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSK 660

Query: 661  SVSETPYELWKGRKGSLRHFRIWGCPAHVLVQNPKKLEHRSKLCFFIGYPKESRGGLFYD 720
            SVSETP +LW GRKGSLRHFRIWGCPAHVL  NPKKLE RSKLC F+GYPK +RGG FYD
Sbjct: 661  SVSETPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYD 720

Query: 721  PQENKIFVSTNATFLEEDHISDHQPRSKLVLKEISKS-------AIDKPSSSTKVVDKTR 780
            P++NK+FVSTNATFLEEDHI +H+PRSK+VL E+SK         +++PS+ T+VV    
Sbjct: 721  PKDNKVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVV-HVG 780

Query: 781  KSGQSHPSQQLREPRRSGRVVHQPDNYLGLIETQVVIPDDGIEDPLTYKQAMKDVDRDQW 840
             S ++H  Q LREPRRSGRV + P  Y+ L ET  VI D  IEDPLT+K+AM+DVD+D+W
Sbjct: 781  SSTRTHQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEW 840

Query: 841  IKAMDLEMESMYFNSVWTLVDQPNDVKPIGCKWIYKRKRDHAGKVQTFKARLVAKGYTQR 900
            IKAM+LE+ESMYFNSVW LVDQP+ VKPIGCKWIYKRKR   GKVQTFKARLVAKGYTQ 
Sbjct: 841  IKAMNLELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQV 900

Query: 901  EGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIYMSQPEGFIE 960
            EGVDYEETFSPVAMLKSIRILLSIA ++DYEIWQMDVKTAFLNGNLEE+IYM QPEGFI 
Sbjct: 901  EGVDYEETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFII 960

Query: 961  QDQEQKVCKLKKSIYGLKQASRSWNIRFETAIKSYGFEQNVDEPCVYKKVVNSIVAFLVL 1020
              QEQK+CKL +SIYGLKQASRSWNIRF+TAIKSYGF+Q VDEPCVYK+++N  VAFLVL
Sbjct: 961  PGQEQKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVL 1020

Query: 1021 YVDDILLIGNDVGYLTDIKKWLAMQFQMKDLGDAQYVLGIQIVRNRKNKTLAMSQASYID 1080
            YVDDILLIGND+G LTDIK+WLA QFQMKDLG+AQ+VLGIQI R+RKNK LA+SQASYID
Sbjct: 1021 YVDDILLIGNDIGLLTDIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYID 1080

Query: 1081 KI-----------------YGIHLSKEQCPKTPQEVEDMRNIPYASAVGSLMYAI----- 1140
            KI                 +G+ LSKEQCPKTPQ+VE+MR+IPYASAVGSLMYA+     
Sbjct: 1081 KIVVKYSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRP 1140

[Close]

BLAST of CSPI03G23600.1 vs. NCBI nr
Match: KAA0031826.1 (gag/pol protein [Cucumis melo var. makuwa] >KAA0032384.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0039313.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0043789.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0048789.1 gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 1630.2 bits (4220), Expect = 0.0e+00
Identity = 851/1342 (63.41%), Postives = 985/1342 (73.40%), Query Frame = 0


Query: 1    MNSSIVQLLASEKLNGDNYAAWKSNLNTILVVDDLRFVLTEECPQNPASNANRTSRDAYD 60
            M S+ + +LA++KLNG+NYA+WK+ +NT+L++DDLRFVL EECPQ PA+NA RT R+ Y+
Sbjct: 1    MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYE 60

Query: 61   RWIKANEKARVYILASMSDVLAKKHESLATAKEIMDSLRGMFGQPEWSLRHEAVKYIYTK 120
            RW KANEKAR YILAS+S+VLAKKHES+ TA+EIMDSL+ MFGQ  + ++H+A+KYIY  
Sbjct: 61   RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA 120

Query: 121  RMKEGTSVREHVLDMMMHFNIAEVNGGPIEEVNQVSFILESLPKSFIPFQTNASLNKIEF 180
            RM EG SVREHVL+MM+HFN+AE+NG  I+E +QVSFILESLP+SF+ F++NA +NKI +
Sbjct: 121  RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY 180

Query: 181  NLTTLLNELQRFQNLTMGKGKQVEANVATTKRKFIRGSSSKTKARPSKP-NAQIKKKGKG 240
             LTTLLNELQ F++L   KG++ EANVAT+ RKF RGS+S TK+ PS   N + KKK  G
Sbjct: 181  TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGG 240

Query: 241  KTHKQN-------------KGKCYHCGQNGHWLRNCPKYLAEKKAEKETQGKYDLLVVET 300
            + +K N             KG C+HC Q GHW RNCPKYLAEKK  K  QGKYDLLV+ET
Sbjct: 241  QGNKANLAAAKTTKKAKAAKGICFHCNQEGHWKRNCPKYLAEKK--KAKQGKYDLLVLET 300

Query: 301  CLGEYENCTWILDSGATNHICFSFQENSSWKKLSEGENTLKVGTGEMVSA---------- 360
            CL E ++  WI+DSGATNH+C SFQ  SSW++L  GE T++VGTG +VSA          
Sbjct: 301  CLVENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCL 360

Query: 361  ------------------------------------------------------------ 420
                                                                        
Sbjct: 361  QKSFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNGVEICSAKLENNLYV 420

Query: 421  ---------------------------------------------------------SAL 480
                                                                     S L
Sbjct: 421  LRSLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSEL 480

Query: 481  ENNTLPPCESCLEGKMTKRSFTGKGLRAKGPLELVHSDLCGPMNVKARGGYEYFISFIDD 540
            E N+LP CESCLEGKMTKR FTGKG RAK PLELVHSDLCGPMNVKARGG+EYFI+F DD
Sbjct: 481  EENSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDD 540

Query: 541  YSRYGHIYLIHHKSSSLEKFKQYKAEVENKLGKTIKILRSDRGGEYMDLRFRDYLIENGI 600
            YSRYG++YL+ HKS +LEKFK+YKAEVEN L KTIK  RSDRGGEYMDL+F++YL+E GI
Sbjct: 541  YSRYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGI 600

Query: 601  QSQLFASSTPQQNSNGVAERRNRTLLDMVRSMMSFAQMPDSFWGYALETAAYILNNVPSK 660
             SQL A  TPQQ  NGV+ERRNRTLLDMVRSMMS+A +P+SFWGYA++TA YILN VPSK
Sbjct: 601  VSQLSAPGTPQQ--NGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSK 660

Query: 661  SVSETPYELWKGRKGSLRHFRIWGCPAHVLVQNPKKLEHRSKLCFFIGYPKESRGGLFYD 720
            SVSETP +LW GRKGSLRHFRIWGCPAHVL  NPKKLE RSKLC F+GYPK +RGG FYD
Sbjct: 661  SVSETPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYD 720

Query: 721  PQENKIFVSTNATFLEEDHISDHQPRSKLVLKEISKS-------AIDKPSSSTKVVDKTR 780
            P++NK+FVSTNATFLEEDHI +H+PRSK+VL E+SK         +++PS+ T+VV    
Sbjct: 721  PKDNKVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVV-HVG 780

Query: 781  KSGQSHPSQQLREPRRSGRVVHQPDNYLGLIETQVVIPDDGIEDPLTYKQAMKDVDRDQW 840
             S ++H  Q LREPRRSGRV + P  Y+ L ET  VI D  IEDPLT+K+AM+DVD+D+W
Sbjct: 781  SSTRTHQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEW 840

Query: 841  IKAMDLEMESMYFNSVWTLVDQPNDVKPIGCKWIYKRKRDHAGKVQTFKARLVAKGYTQR 900
            IKAM+LE+ESMYFNSVW LVDQP+ VKPIGCKWIYKRKR   GKVQTFKARLVAKGYTQ 
Sbjct: 841  IKAMNLELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQV 900

Query: 901  EGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIYMSQPEGFIE 960
            EGVDYEETFSPVAMLKSIRILLSIA ++DYEIWQMDVKTAFLNGNLEE+IYM QPEGFI 
Sbjct: 901  EGVDYEETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFII 960

Query: 961  QDQEQKVCKLKKSIYGLKQASRSWNIRFETAIKSYGFEQNVDEPCVYKKVVNSIVAFLVL 1020
              QEQK+CKL +SIYGLKQASRSWNIRF+TAIKSYGF+Q VDEPCVYK+++N  VAFLVL
Sbjct: 961  PGQEQKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVL 1020

Query: 1021 YVDDILLIGNDVGYLTDIKKWLAMQFQMKDLGDAQYVLGIQIVRNRKNKTLAMSQASYID 1080
            YVDDILLIGND+G LTDIK+WLA QFQMKDLG+AQ+VLGIQI R+RKNK LA+SQASYID
Sbjct: 1021 YVDDILLIGNDIGLLTDIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYID 1080

Query: 1081 KI-----------------YGIHLSKEQCPKTPQEVEDMRNIPYASAVGSLMYAI----- 1140
            KI                 +G+ LSKEQCPKTPQ+VE+MR+IPYASAVGSLMYA+     
Sbjct: 1081 KIVVKYSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRP 1140

[Close]

BLAST of CSPI03G23600.1 vs. NCBI nr
Match: KAA0048404.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 1626.3 bits (4210), Expect = 0.0e+00
Identity = 852/1342 (63.49%), Postives = 984/1342 (73.32%), Query Frame = 0


Query: 1    MNSSIVQLLASEKLNGDNYAAWKSNLNTILVVDDLRFVLTEECPQNPASNANRTSRDAYD 60
            M S+ + +LA++KLNG+NYA+WK N NT+L++DDLRFVL EECPQ PA+NA RT R+ Y+
Sbjct: 1    MTSATLNMLAADKLNGNNYASWK-NTNTVLIIDDLRFVLVEECPQVPAANATRTVREPYE 60

Query: 61   RWIKANEKARVYILASMSDVLAKKHESLATAKEIMDSLRGMFGQPEWSLRHEAVKYIYTK 120
            RW KANEKAR YILAS+S+VLAKKHES+ TA+EIMDSL+ MFGQ  + ++H+A+KYIY  
Sbjct: 61   RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA 120

Query: 121  RMKEGTSVREHVLDMMMHFNIAEVNGGPIEEVNQVSFILESLPKSFIPFQTNASLNKIEF 180
            RM EG SVREHVL+MM+HFN+AE+NG  I+E +QVSFILESLP+SF+ F++NA +NKI +
Sbjct: 121  RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY 180

Query: 181  NLTTLLNELQRFQNLTMGKGKQVEANVATTKRKFIRGSSSKTKARPSKP-NAQIKKKGKG 240
             LTTLLNELQ F++L   KG++ EANVAT+ RKF RGS+S TK+ PS   N + KKK  G
Sbjct: 181  TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGG 240

Query: 241  KTHKQN-------------KGKCYHCGQNGHWLRNCPKYLAEKKAEKETQGKYDLLVVET 300
            + +K N             KG C+HC Q GHW RNCPKYLAEKK  K  QGKYDLLV+ET
Sbjct: 241  QGNKANLAAAKTTKKAKAAKGICFHCNQEGHWKRNCPKYLAEKK--KAKQGKYDLLVLET 300

Query: 301  CLGEYENCTWILDSGATNHICFSFQENSSWKKLSEGENTLKVGTGEMVSA---------- 360
            CL E ++  WI+DSGATNH+C SFQ  SSW++L  GE T++VGTG +VSA          
Sbjct: 301  CLVENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCL 360

Query: 361  ------------------------------------------------------------ 420
                                                                        
Sbjct: 361  QKSFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNGVEICSAKLENNLYV 420

Query: 421  ---------------------------------------------------------SAL 480
                                                                     S L
Sbjct: 421  LRSLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSEL 480

Query: 481  ENNTLPPCESCLEGKMTKRSFTGKGLRAKGPLELVHSDLCGPMNVKARGGYEYFISFIDD 540
            E N+LP CESCLEGKMTKR FTGKG RAK PLELVHSDLCGPMNVKARGG+EYFI+F DD
Sbjct: 481  EENSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDD 540

Query: 541  YSRYGHIYLIHHKSSSLEKFKQYKAEVENKLGKTIKILRSDRGGEYMDLRFRDYLIENGI 600
            YSRYG++YL+ HKS +LEKFK+YKAEVEN L KTIK  RSDRGGEYMDL+F++YL+E GI
Sbjct: 541  YSRYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGI 600

Query: 601  QSQLFASSTPQQNSNGVAERRNRTLLDMVRSMMSFAQMPDSFWGYALETAAYILNNVPSK 660
             SQL A  TPQQ  NGV+ERRNRTLLDMVRSMMS+A +P+SFWGYA++TA YILN VPSK
Sbjct: 601  VSQLSAPGTPQQ--NGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSK 660

Query: 661  SVSETPYELWKGRKGSLRHFRIWGCPAHVLVQNPKKLEHRSKLCFFIGYPKESRGGLFYD 720
            SVSETP +LW GRKGSLRHFRIWGCPAHVL  NPKKLE RSKLC F+GYPK +RGG FYD
Sbjct: 661  SVSETPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYD 720

Query: 721  PQENKIFVSTNATFLEEDHISDHQPRSKLVLKEISKS-------AIDKPSSSTKVVDKTR 780
            P++NK+FVSTNATFLEEDHI +H+PRSK+VL E+SK         +++PS+ T+VV    
Sbjct: 721  PKDNKVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVV-HVG 780

Query: 781  KSGQSHPSQQLREPRRSGRVVHQPDNYLGLIETQVVIPDDGIEDPLTYKQAMKDVDRDQW 840
             S ++H  Q LREPRRSGRV + P  Y+ L ET  VI D  IEDPLT+K+AM+DVD+D+W
Sbjct: 781  SSTRTHQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEW 840

Query: 841  IKAMDLEMESMYFNSVWTLVDQPNDVKPIGCKWIYKRKRDHAGKVQTFKARLVAKGYTQR 900
            IKAM+LE+ESMYFNSVW LVDQP+ VKPIGCKWIYKRKR   GKVQTFKARLVAKGYTQ 
Sbjct: 841  IKAMNLELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQV 900

Query: 901  EGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIYMSQPEGFIE 960
            EGVDYEETFSPVAMLKSIRILLSIA ++DYEIWQMDVKTAFLNGNLEE+IYM QPEGFI 
Sbjct: 901  EGVDYEETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFII 960

Query: 961  QDQEQKVCKLKKSIYGLKQASRSWNIRFETAIKSYGFEQNVDEPCVYKKVVNSIVAFLVL 1020
              QEQK+CKL +SIYGLKQASRSWNIRF+TAIKSYGF+Q VDEPCVYK+++N  VAFLVL
Sbjct: 961  PGQEQKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVL 1020

Query: 1021 YVDDILLIGNDVGYLTDIKKWLAMQFQMKDLGDAQYVLGIQIVRNRKNKTLAMSQASYID 1080
            YVDDILLIGND+G LTDIK+WLA QFQMKDLG+AQ+VLGIQI R+RKNK LA+SQASYID
Sbjct: 1021 YVDDILLIGNDIGLLTDIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYID 1080

Query: 1081 KI-----------------YGIHLSKEQCPKTPQEVEDMRNIPYASAVGSLMYAI----- 1140
            KI                 +G+ LSKEQCPKTPQ+VE+MR+IPYASAVGSLMYA+     
Sbjct: 1081 KIVVKYSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRP 1140

[Close]

BLAST of CSPI03G23600.1 vs. NCBI nr
Match: TYK14550.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 1606.7 bits (4159), Expect = 0.0e+00
Identity = 840/1330 (63.16%), Postives = 973/1330 (73.16%), Query Frame = 0


Query: 1    MNSSIVQLLASEKLNGDNYAAWKSNLNTILVVDDLRFVLTEECPQNPASNANRTSRDAYD 60
            M S+ + +LA++KLNG+NYA+WK+ +NT+L++DDLRFVL EECPQ PA+NA RT R+ Y+
Sbjct: 1    MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYE 60

Query: 61   RWIKANEKARVYILASMSDVLAKKHESLATAKEIMDSLRGMFGQPEWSLRHEAVKYIYTK 120
            RW KANEKAR YILAS+S+VLAKKHES+ TA+EIMDSL+ MFGQ  + ++H+A+KYIY  
Sbjct: 61   RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA 120

Query: 121  RMKEGTSVREHVLDMMMHFNIAEVNGGPIEEVNQVSFILESLPKSFIPFQTNASLNKIEF 180
            RM EG SVREHVL+MM+HFN+AE+NG  I+E +QVSFILESLP+SF+ F++NA +NKI +
Sbjct: 121  RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY 180

Query: 181  NLTTLLNELQRFQNLTMGKGKQVEANVATTKRKFIRGSSSKTKARPSKP-NAQIKKKGKG 240
             LTTLLNELQ F++L   KG++ EANVAT+ RKF RGS+S TK+ PS   N + KKK  G
Sbjct: 181  TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGG 240

Query: 241  KTHKQN-------------KGKCYHCGQNGHWLRNCPKYLAEKKAEKETQGKYDLLVVET 300
            + +K N             KG C+HC Q GHW RNCPKYLAEKK  K  QGKYDLLV+ET
Sbjct: 241  QGNKANLAAAKTTKKTKAAKGICFHCNQEGHWKRNCPKYLAEKK--KAKQGKYDLLVLET 300

Query: 301  CLGEYENCTWILDSGATNHICFSFQENSSWKKLSEGENTLKVGTGEMVSA---------- 360
            CL E ++  WI+DSGATNH+C SFQ  SSW++L  GE T++VGTG +VSA          
Sbjct: 301  CLVENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCL 360

Query: 361  ------------------------------------------------------------ 420
                                                                        
Sbjct: 361  QKSFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNGVEICSAKLENNLYV 420

Query: 421  ---------------------------------------------------------SAL 480
                                                                     S L
Sbjct: 421  LRSLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSEL 480

Query: 481  ENNTLPPCESCLEGKMTKRSFTGKGLRAKGPLELVHSDLCGPMNVKARGGYEYFISFIDD 540
            E N+LP CESCLEGKMTKR FTGKG RAK PLELVHSDLCGPMNVKARGG+EYFI+F DD
Sbjct: 481  EENSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDD 540

Query: 541  YSRYGHIYLIHHKSSSLEKFKQYKAEVENKLGKTIKILRSDRGGEYMDLRFRDYLIENGI 600
            YSRYG++YL+ HKS +LEKFK+YKAEVEN L KTIK  RSDRGGEYMDL+F++YL+E GI
Sbjct: 541  YSRYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGI 600

Query: 601  QSQLFASSTPQQNSNGVAERRNRTLLDMVRSMMSFAQMPDSFWGYALETAAYILNNVPSK 660
             SQL A  TPQQ  NGV+ERRNRTLLDMVRSMMS+A +P+SFWGYA++TA YILN VPSK
Sbjct: 601  VSQLSAPGTPQQ--NGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSK 660

Query: 661  SVSETPYELWKGRKGSLRHFRIWGCPAHVLVQNPKKLEHRSKLCFFIGYPKESRGGLFYD 720
            SVSETP +LW GRKGSLRHFRIWGCPAHVL  NPKKLE RSKLC F+GYPK +RGG FYD
Sbjct: 661  SVSETPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYD 720

Query: 721  PQENKIFVSTNATFLEEDHISDHQPRSKLVLKEISKS-------AIDKPSSSTKVVDKTR 780
            P++NK+FVSTNATFLEEDHI +H+PRSK+VL E+SK         +++PS+ T+VV    
Sbjct: 721  PKDNKVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVV-HVG 780

Query: 781  KSGQSHPSQQLREPRRSGRVVHQPDNYLGLIETQVVIPDDGIEDPLTYKQAMKDVDRDQW 840
             S ++H  Q LREPRRSGRV + P  Y+ L ET  VI D  IEDPLT+K+AM+DVD+D+W
Sbjct: 781  SSTRTHQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEW 840

Query: 841  IKAMDLEMESMYFNSVWTLVDQPNDVKPIGCKWIYKRKRDHAGKVQTFKARLVAKGYTQR 900
            IKAM+LE+ESMYFNSVW LVDQP+ VKPIGCKWIYKRKR   GKVQTFKARLVAKGYTQ 
Sbjct: 841  IKAMNLELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQV 900

Query: 901  EGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIYMSQPEGFIE 960
            EGVDYEETFSPVAMLKSIRILLSIA ++DYEIWQMDVKTAFLNGNLEE+IYM QPEGFI 
Sbjct: 901  EGVDYEETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFII 960

Query: 961  QDQEQKVCKLKKSIYGLKQASRSWNIRFETAIKSYGFEQNVDEPCVYKKVVNSIVAFLVL 1020
              QEQK+CKL +SIYGLKQASRSWNIRF+TAIKSYGF+Q VDEPCVYK+++N  VAFLVL
Sbjct: 961  PGQEQKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVL 1020

Query: 1021 YVDDILLIGNDVGYLTDIKKWLAMQFQMKDLGDAQYVLGIQIVRNRKNKTLAMSQASYID 1080
            YVDDILLIGND+G LTDIK+WLA QFQMKDLG+AQ+VLGIQI R+RKNK LA+SQASYID
Sbjct: 1021 YVDDILLIGNDIGLLTDIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYID 1080

Query: 1081 KI-----------------YGIHLSKEQCPKTPQEVEDMRNIPYASAVGSLMYAI----- 1128
            KI                 +G+ LSKEQCPKTPQ+VE+MR+IPYASAVGSLMYA+     
Sbjct: 1081 KIVVKYSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRP 1140

[Close]

BLAST of CSPI03G23600.1 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )

HSP 1 Score: 257.3 bits (656), Expect = 5.8e-68
Identity = 152/475 (32.00%), Postives = 245/475 (51.58%), Query Frame = 0


Query: 675  EDPLTYKQAMKDVDRDQWIKAMDLEMESMYFNSVWTLVDQPNDVKPIGCKWIYKRKRDHA 734
            ++P TY +A + +    W  AMD E+ +M     W +   P + KPIGCKW+YK K +  
Sbjct: 84   KEPSTYNEAKEFL---VWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNSD 143

Query: 735  GKVQTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFL 794
            G ++ +KARLVAKGYTQ+EG+D+ ETFSPV  L S++++L+I+  Y++ + Q+D+  AFL
Sbjct: 144  GTIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAFL 203

Query: 795  NGNLEESIYMSQPEGFIEQDQE----QKVCKLKKSIYGLKQASRSWNIRFETAIKSYGFE 854
            NG+L+E IYM  P G+  +  +      VC LKKSIYGLKQASR W ++F   +  +GF 
Sbjct: 204  NGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGFGFV 263

Query: 855  QNVDEPCVYKKVVNSIVAFLVLYVDDILLIGNDVGYLTDIKKWLAMQFQMKDLGDAQYVL 914
            Q+  +   + K+  ++   +++YVDDI++  N+   + ++K  L   F+++DLG  +Y L
Sbjct: 264  QSHSDHTYFLKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYFL 323

Query: 915  GIQIVRNRKNKTLAMSQ--ASYIDKIYGIHLSKEQCPKTPQEVEDMRN-------IPYAS 974
            G++I R+     +   +     +D+   +       P  P       +         Y  
Sbjct: 324  GLEIARSAAGINICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAHSGGDFVDAKAYRR 383

Query: 975  AVGSLMY----------------------------AITKDYMLVYGT----------KDL 1034
             +G LMY                            A+ K    + GT           ++
Sbjct: 384  LIGRLMYLQITRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLFYSSQAEM 443

Query: 1035 ILIGYTDSDFQTDKDARKSTSGSVFTLNGGAVVWRSIKQTCIADSTMEAEYVAACEAAKE 1094
             L  ++D+ FQ+ KD R+ST+G    L    + W+S KQ  ++ S+ EAEY A   A  E
Sbjct: 444  QLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEYRALSFATDE 503

Query: 1095 AVWLRKFLTDFEVVSNMHLPITLYYDNSGAVANSREPRSHKRGKHIERKYHLIRE 1099
             +WL +F  + ++   +  P  L+ DN+ A+  +     H+R KHIE   H +RE
Sbjct: 504  MMWLAQFFRELQL--PLSKPTLLFCDNTAAIHIATNAVFHERTKHIESDCHSVRE 553

[Close]

BLAST of CSPI03G23600.1 vs. TAIR 10
Match: ATMG00820.1 (Reverse transcriptase (RNA-dependent DNA polymerase) )

HSP 1 Score: 82.0 bits (201), Expect = 3.3e-15
Identity = 40/103 (38.83%), Postives = 62/103 (60.19%), Query Frame = 0


Query: 675 EDPLTYKQAMKDVDRDQWIKAMDLEMESMYFNSVWTLVDQPNDVKPIGCKWIYKRKRDHA 734
           ++P +   A+KD     W +AM  E++++  N  W LV  P +   +GCKW++K K    
Sbjct: 26  KEPKSVIFALKD---PGWCQAMQEELDALSRNKTWILVPPPVNQNILGCKWVFKTKLHSD 85

Query: 735 GKVQTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILLSIA 778
           G +   KARLVAKG+ Q EG+ + ET+SPV    +IR +L++A
Sbjct: 86  GTLDRLKARLVAKGFHQEEGIYFVETYSPVVRTATIRTILNVA 125

[Close]

BLAST of CSPI03G23600.1 vs. TAIR 10
Match: ATMG00810.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 56.2 bits (134), Expect = 2.0e-07
Identity = 58/226 (25.66%), Postives = 90/226 (39.82%), Query Frame = 0


Query: 869  FLVLYVDDILLIGNDVGYLTDIKKWLAMQFQMKDLGDAQYVLGIQIVRNRKNKTLAMSQA 928
            +L+LYVDDILL G+    L  +   L+  F MKDLG   Y LGIQI  +     L +SQ 
Sbjct: 2    YLLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSG--LFLSQT 61

Query: 929  SYIDKIY---GIHLSKEQCPKTPQEVEDMRNI-------PYASAVGSLMY-AITK----- 988
             Y ++I    G+   K      P ++    +         + S VG+L Y  +T+     
Sbjct: 62   KYAEQILNNAGMLDCKPMSTPLPLKLNSSVSTAKYPDPSDFRSIVGALQYLTLTRPDISY 121

Query: 989  ---------------DY-----------------MLVYGTKDLILIGYTDSDFQTDKDAR 1047
                           D+                 + ++    L +  + DSD+      R
Sbjct: 122  AVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTR 181

[Close]

BLAST of CSPI03G23600.1 vs. TAIR 10
Match: ATMG00710.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 50.4 bits (119), Expect = 1.1e-05
Identity = 27/82 (32.93%), Postives = 47/82 (57.32%), Query Frame = 0


Query: 481 NRTLLDMVRSMMSFAQMPDSFWGYALETAAYILNNVPSKSVS-ETPYELWKGRKGSLRHF 540
           NRT+++ VRSM+    +P +F   A  TA +I+N  PS +++   P E+W     +  + 
Sbjct: 2   NRTIIEKVRSMLCECGLPKTFRADAANTAVHIINKYPSTAINFHVPDEVWFQSVPTYSYL 61

Query: 541 RIWGCPAHVLVQNPKKLEHRSK 562
           R +GC A++   +  KL+ R+K
Sbjct: 62  RRFGCVAYIHC-DEGKLKPRAK 82

The following BLAST results are available for this feature:

BLAST of CSPI03G23600.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P10978	1.6e-163	30.69	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum...	[more]
P04146	2.9e-112	25.63	Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3	[more]
Q9ZT94	3.2e-95	23.59	Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O...	[more]
Q94HW2	1.5e-92	23.21	Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O...	[more]
Q12490	1.4e-21	27.82	Transposon Ty1-BL Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 2...	[more]

BLAST of CSPI03G23600.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
E2GK51	0.0e+00	74.92	Gag/pol protein (Fragment) OS=Bryonia dioica OX=3652 PE=4 SV=1	[more]
A0A5A7SMH8	0.0e+00	63.41	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold219G0025...	[more]
A0A5D3CPJ6	0.0e+00	63.41	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold119G0004...	[more]
A0A5A7TZD7	0.0e+00	63.49	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold264G0013...	[more]
A0A5A7TWB9	0.0e+00	63.16	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold133G0031...	[more]

BLAST of CSPI03G23600.1 vs. NCBI nr


Match Name	E-value	Identity	Description
ADJ18449.1	0.0e+00	74.92	gag/pol protein, partial [Bryonia dioica]	[more]
KAA0035879.1	0.0e+00	63.41	gag/pol protein [Cucumis melo var. makuwa] >KAA0044276.1 gag/pol protein [Cucumi...	[more]
KAA0031826.1	0.0e+00	63.41	gag/pol protein [Cucumis melo var. makuwa] >KAA0032384.1 gag/pol protein [Cucumi...	[more]
KAA0048404.1	0.0e+00	63.49	gag/pol protein [Cucumis melo var. makuwa]	[more]
TYK14550.1	0.0e+00	63.16	gag/pol protein [Cucumis melo var. makuwa]	[more]

BLAST of CSPI03G23600.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G23160.1	5.8e-68	32.00	cysteine-rich RLK (RECEPTOR-like protein kinase) 8	[more]
ATMG00820.1	3.3e-15	38.83	Reverse transcriptase (RNA-dependent DNA polymerase)	[more]
ATMG00810.1	2.0e-07	25.66	DNA/RNA polymerases superfamily protein	[more]
ATMG00710.1	1.1e-05	32.93	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 175..195
None	No IPR available	PFAM	PF14223	Retrotran_gag_2	coord: 62..191 e-value: 7.3E-17 score: 61.4
None	No IPR available	GENE3D	4.10.60.10		coord: 241..285 e-value: 3.5E-7 score: 32.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 215..246
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 620..651
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 228..246
None	No IPR available	PANTHER	PTHR45895	FAMILY NOT NAMED	coord: 336..649 coord: 675..962
None	No IPR available	CDD	cd09272	RNase_HI_RT_Ty1	coord: 986..1127 e-value: 7.96112E-58 score: 193.454
IPR001878	Zinc finger, CCHC-type	SMART	SM00343	c2hcfinal6	coord: 248..264 e-value: 4.8E-4 score: 29.5
IPR001878	Zinc finger, CCHC-type	PFAM	PF00098	zf-CCHC	coord: 247..264 e-value: 1.5E-5 score: 24.9
IPR001878	Zinc finger, CCHC-type	PROSITE	PS50158	ZF_CCHC	coord: 248..264 score: 10.542789
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 364..542 e-value: 4.4E-37 score: 129.3
IPR013103	Reverse transcriptase, RNA-dependent DNA polymerase	PFAM	PF07727	RVT_2	coord: 706..934 e-value: 3.0E-72 score: 243.2
IPR001584	Integrase, catalytic core	PFAM	PF00665	rve	coord: 369..462 e-value: 4.1E-10 score: 39.9
IPR001584	Integrase, catalytic core	PROSITE	PS50994	INTEGRASE	coord: 366..533 score: 20.106445
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 706..1094
IPR036875	Zinc finger, CCHC-type superfamily	SUPERFAMILY	57756	Retrovirus zinc finger-like domains	coord: 236..267
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 365..527

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CSPI03G23600	CSPI03G23600	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CSPI03G23600.1.cds6	CSPI03G23600.1.cds6	CDS
CSPI03G23600.1.cds5	CSPI03G23600.1.cds5	CDS
CSPI03G23600.1.cds4	CSPI03G23600.1.cds4	CDS
CSPI03G23600.1.cds3	CSPI03G23600.1.cds3	CDS
CSPI03G23600.1.cds2	CSPI03G23600.1.cds2	CDS
CSPI03G23600.1.cds1	CSPI03G23600.1.cds1	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CSPI03G23600.1	CSPI03G23600.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding