CSPI03G20140.1 (mRNA) Cucumber (PI 183967) v1

Overview


Name	CSPI03G20140.1
Type	mRNA
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	Transportin-3 isoform X1
Location	Chr3: 15941658 .. 15946256 (-)
Sequence length	840
RNA-Seq Expression	CSPI03G20140.1
Synteny	CSPI03G20140.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAATTGCGAATGAAAGTCAGTCAAGCAGTTCACGTTCTAAATCATGATACCCAATCTTGCAACCGCGTGGCAGCAAATCAATGGTTAGTTCAGTTTCAACAGACAGGTGCTGCTTGGGAAGTTGCTACTGCTATCCTTACCTCCGATCATGTTCAGCCTTCAATGTCCTCCTTTGTCCCTGATTTGGAAGTCGAGTTCTTTGCAGCTCAGATTCTTAAACGCAAGGTTAGTAGTTTGACTTTAATTTTAATTCCAGCCCAATTTTGCATTGTTGAAACATCTTTTTTTCCTTATTTTGTGCCAGCCTATTGTTTTGCTTAAGCACAATAACTTCGACACTGGATTTAATTTTGCAACCAGGAAGAATCTAACCTACAAAATTCCATTTTAAAAAAAATAAAAAATAAAATTGTATCAATTTATCTATCTTTTTTCTATTTTAACAAGTAAAGGGATCTTTCATTCAGAGCAGTTTGATAAGCCATCATCTTTATTGGGTCTTTCAGTAGCGTCGTTCCTTTCCACGTTGGAGTCTTACCCTTCTTCTTCTTTGGGTTTTCGTAGCCTGTTTGGTCAGTAGGGAGACAGTGGATGTCTTGACTCTTATCTTTGTGTGGATGTTTGCCTTTGGGGTTCTTGTTAGTCCAAAGGGTTTTCTTCTTCCTTAGCTTGTTCATTTTTCTCCTAGCTAGCAGTTTTGTTTTTTCCTTAGTATGGAAGATGGAAACTTCGAACTTCCAAGAAGGTAAGTTATTTGTGTGGCAGGTTTTGCAAGAAAGAGTTAACACCTTGGGTAGGCTCTTGGCTAGGGACCCTGTTTGGTTAGGCCACATTGTTGTATACTTTGCATGCAGATAGTGGAGGACCTTGAAGAAAAAATGCCTTCTCTGCACATCTAAAGAGGCAAATCGAGCCAAACAAAGAAGAAGGAAAGAGAGCAAAAAACCCTTCTCCATTTTTGAGGGCTGTGCTAAGCAAGCTCTTTCACATCCAACTGTGGTTTACACCCAAGCACTTTCAGCCCTTTTTGCCTCTTTAGTTTCACAATCCACCAAAGCCAGATTCTACAGAACCAGTTCTGGAAGTGGTCAATCCACCATTAATGGTCTTTTCCAATGTAGAGGGGACCTTAGCAATGGCGATTGTTACAACTGTGGTTTGAAATGCTGTATAAAACTTGTGGCTCTATGAATGCTCCTGGAAGTGGGTTTGAAGAGCGTCGAGATACTTCTCTGTTTGTTTTGGAGAATGGTGTTGTGAGTGGCCATGGATTTTACACCACAAATTACCAATCTGTTTATGTTTTGGGGCAATGTGAAGGGGATTTGGGGGATTCAGATTGTGGTGAATGTGTTAAAAATGCTGTTCAAAGAGCTCAAGTTGAATGTGGAAGCTCAATTTCAGGCCAACTTTATCTCCATAGATGCTTTATAAGTTACAGTTATTACCCAAATGGGGTGCCCACAAGATCATCATCACCATCATCTTCATCTTCCTCCTCATCATGAGGAAATATAGGGAAAACAGTGTCTATATTTCTTGGAGCAACAGCAGGACTGGCATTTGTGGTCATTTGTTTGCTTTTTGCAAGAAGGTTAATGAAAAACATGATGATTATTGAAAGAAGCAAGATGAGATCTTTAAAGATGCAAAAACAATTCTTTATTTTTTATTTTTTCTTTTTTAATGAACAGAATGTCCCCTTTTTTCTAAAAAGGAATGTGAGTTTTTTTATGGTCAATAGGGTTTTTTTTCAAAATTGAGAATGAAATGAATGATATGTATGAAACTGAAATAATTTTTACACAAAGTGAAGATGAAGAATGTTGGGAATGAAAAATGGTGGTAACCCATTTTTGAAAAGGATACGAGTCTCGCTATTATTAATATTGAAAATAGAGAGACAAAGCTCAATGTACATGAGGGTTATACGAGAGCAATAGGAGGGGAGAATCAGTAGGCGCACCCAGGCATCTCAACTAGGTTGACACCCCTTAGTGCCCTCATCACATCCAAAAAGCGGAAAAAAAATCCTAAATACCATGTTTCTAAAAGCAATACAAGAGCCAAACAAACTATCCAAAACAGAAACATAAGTAAGGCAGCAAGCCAAAAATGGTGGTAACCCATTAAAAAAAAAGATAGTGGAGGACCTTTACCATGTTCTTTGGAGTTGTGATTTTACTCGGGTTGGCACATTTCTTTGATACATTATACTATATTTGCTAGGTTGTAGGGACTTGGGGTTGTAGGGAGTCGATCAAGGAATTTCTCCTCCACATGCCTTTTCGGGGGAATGATCTATTTATGTGGAAGGCACGGGTGTGTGCTATTTTATGGGGTATGAATGAGGAGAAAAACATTAGAATCTGCAGGAAGAGGGAGAGTTTTTGTACTGATGCTTGGGCCCCTAGATTCCTTGTTTCTCATTGGGCTCAAATATCTAGATATTTTTGTAATTTTTCACTTAGTCACATCTTAATGAAGAGACTTGTTTCTATCAATGAAAAGTTCGTTTCTGTTTCAAAAAAATCATGCCATGCATCCTTTATGTTTCTTTGTCGTTCCTTAACTTTTGTTTTTAGCACCTATATTTTTAATTCTATTGTATCCCAAAACATTAGTTTCTTGTCATTGCAACCTTTTCTTTTAAAAGAAACAGCATCGTTTCAGTTTGTTGTGGGCTTGGTGACTCTGATCTAAACCTAAGTTGGACTGCTAGGGGGGTTTGATTCTTTATTTTTCTTTTATTTTTTTAATAGTTTTTACCTTTCCTTGATTGCTTGGATTTCCAAGAGGGTGACTAAGAATCTTAGTCGAGGGCTTAAAAGCTGTGAAAAATTTATCTTGTACTTCTAGTTCTATTCATATTATCATCTAGTCCATATTGTGATGACTTGGTACTTTTGAAAAAAAAGAAAAGAAGACCAGATTTTATCTACTCCTTGATGGAACTATGATGAAATGGTAAGTGCCTATCTATTAAATCATCATTTAAAAATACACATTTGAAGGCCTATAATTATACAATTTCTCATTTGAATTTGAAATTCTTACCTGCCAGATCCAGAATGAAGGCTATCTTTTACAATTAGGTGTAAAAGATGCTCTACTGAACGCTCTTCTTGTGGCTGCCAAAAAGTTTAGTTCAGGTCCTCCTCAGGTGCTTCACCTCTTTCTTGAAATTTGAGCTTTTGTATCTTTTTATCATTAGAAATTTGTATCTTTGGTAAAAAAAAACAGATATTTGTTAATTGTGTAGATAGGTGTGCTTATTTTAAAATTTTGCCTTTTCTTTAAACTCCCTCATAAAATTATTATTCTCATATCCATGAAATGCATGATGTCTCTCACCAAAAATAGAAAAAATTATTTATTCATTTTTGTTTTGGTAAGAGGTAACTGTGTATGATGGAAAAGTTCGTTTCTTTTAGAAAAAGGAGATAACAGTTTATGAAGTTTGAAGTCTAAATCAAACCTATAACTTCTTTAACCGTAGTTCAAGCCTATAATGTCGTCCTCAGTTGGGGGTTTTTCGTGGCTCTATTTCTATTACAGAGTACCATATTATGTCTGTATTATTTGTTTAGTTAATTGTCTAAATGAGTTCTTAACTTATTACTTCTTCCTTACCTTAGGATATGCCCTCTGCTTTTGTGACAGCTTTTAACTCAAATCTGTCTTGCACTGTCTGCGCTTATTCTGAGAACAGTGGAGCACGGGAAACCCATTGATCGTCTTTTCTACAGTCTTCAGAATCTGCAGAGTGTGGACAACGGCAATTTGGCTGTTCTGGAGATGCTTACTGTTTTACCTGAAGAAGTCGTTGACAGCCAAAATGTTGATTGTAAAATAAGTTCATCCTGTAGGAGCCAATATGCCCGAGAGGTGTAGGATCTTTCTATCTGTACTAATGTGTTTGCAGCCATGAGCCTTCTAATTTATGGTCCACTTCATCTTGTATTGTTTTCCATTTTGTTGAACTTTAATCCTGCAGCTTCTGTTGCACACTCCTATGGTTCTTGAGTTCCTACTGCAGCAATCTGAGAAAGGGTTTGATTGTGGGACTCAGTCGCAGGAAAAGAACAGAAAAATTCTTCGATGTTTGCTGAGTTGGGTATGAAGCTAAAATTTATAATGATCTATTGGGTAGTGCTTTTTGTTTTTTTATTTCTGTCTGTCTATAAATTTCTAGGGCTAAGTATTGACTATTATCTCATATAAAGAAAAAGTACTTTGCATGTTTTTCTTTAGCTTTTGGTATGAAATTTAACTTTCATTTATTATGTCTCATTTCCTCGTGAATGTTACAGCGTCACTATGTTTTTTCTTCTTCATAAAAGTTAGTTTTCTTGTGTCCAGGTGCGTGTTGGGTGCTTCTCTGAGATACCTCAGGGTTCATTGCCAACCCATCCCCTCCTTAATTTTGTGCTCAAGTCTCTGCAGGTAGGAGTTTTAGTCCTTACAAATTGCAGTCTGCTTGTTTAGCATCTAAAAGTTATTCTTGTGTAGGATGTAGCTTCGTTTGATTTGGCCATTGAAGTTCTTGTTGAGCTTGTGAGTAGACATGAGGTATGTATCACCCCTTATGAGCAA

mRNA sequence

ATGGAATTGCGAATGAAAGTCAGTCAAGCAGTTCACGTTCTAAATCATGATACCCAATCTTGCAACCGCGTGGCAGCAAATCAATGGTTAGTTCAGTTTCAACAGACAGGTGCTGCTTGGGAAGTTGCTACTGCTATCCTTACCTCCGATCATGTTCAGCCTTCAATGTCCTCCTTTGTCCCTGATTTGGAAGTCGAGTTCTTTGCAGCTCAGATTCTTAAACGCAAGATCCAGAATGAAGGCTATCTTTTACAATTAGGTGTAAAAGATGCTCTACTGAACGCTCTTCTTGTGGCTGCCAAAAAGTTTAGTTCAGGTCCTCCTCAGCTTTTAACTCAAATCTGTCTTGCACTGTCTGCGCTTATTCTGAGAACAGTGGAGCACGGGAAACCCATTGATCGTCTTTTCTACAGTCTTCAGAATCTGCAGAGTGTGGACAACGGCAATTTGGCTGTTCTGGAGATGCTTACTGTTTTACCTGAAGAAGTCGTTGACAGCCAAAATGTTGATTGTAAAATAAGTTCATCCTGTAGGAGCCAATATGCCCGAGAGCTTCTGTTGCACACTCCTATGGTTCTTGAGTTCCTACTGCAGCAATCTGAGAAAGGGTTTGATTGTGGGACTCAGTCGCAGGAAAAGAACAGAAAAATTCTTCGATGTTTGCTGAGTTGGGTGCGTGTTGGGTGCTTCTCTGAGATACCTCAGGGTTCATTGCCAACCCATCCCCTCCTTAATTTTGTGCTCAAGTCTCTGCAGGATGTAGCTTCGTTTGATTTGGCCATTGAAGTTCTTGTTGAGCTTGTGAGTAGACATGAGGTATGTATCACCCCTTATGAGCAA

Coding sequence (CDS)

ATGGAATTGCGAATGAAAGTCAGTCAAGCAGTTCACGTTCTAAATCATGATACCCAATCTTGCAACCGCGTGGCAGCAAATCAATGGTTAGTTCAGTTTCAACAGACAGGTGCTGCTTGGGAAGTTGCTACTGCTATCCTTACCTCCGATCATGTTCAGCCTTCAATGTCCTCCTTTGTCCCTGATTTGGAAGTCGAGTTCTTTGCAGCTCAGATTCTTAAACGCAAGATCCAGAATGAAGGCTATCTTTTACAATTAGGTGTAAAAGATGCTCTACTGAACGCTCTTCTTGTGGCTGCCAAAAAGTTTAGTTCAGGTCCTCCTCAGCTTTTAACTCAAATCTGTCTTGCACTGTCTGCGCTTATTCTGAGAACAGTGGAGCACGGGAAACCCATTGATCGTCTTTTCTACAGTCTTCAGAATCTGCAGAGTGTGGACAACGGCAATTTGGCTGTTCTGGAGATGCTTACTGTTTTACCTGAAGAAGTCGTTGACAGCCAAAATGTTGATTGTAAAATAAGTTCATCCTGTAGGAGCCAATATGCCCGAGAGCTTCTGTTGCACACTCCTATGGTTCTTGAGTTCCTACTGCAGCAATCTGAGAAAGGGTTTGATTGTGGGACTCAGTCGCAGGAAAAGAACAGAAAAATTCTTCGATGTTTGCTGAGTTGGGTGCGTGTTGGGTGCTTCTCTGAGATACCTCAGGGTTCATTGCCAACCCATCCCCTCCTTAATTTTGTGCTCAAGTCTCTGCAGGATGTAGCTTCGTTTGATTTGGCCATTGAAGTTCTTGTTGAGCTTGTGAGTAGACATGAGGTATGTATCACCCCTTATGAGCAA

Protein sequence

MELRMKVSQAVHVLNHDTQSCNRVAANQWLVQFQQTGAAWEVATAILTSDHVQPSMSSFVPDLEVEFFAAQILKRKIQNEGYLLQLGVKDALLNALLVAAKKFSSGPPQLLTQICLALSALILRTVEHGKPIDRLFYSLQNLQSVDNGNLAVLEMLTVLPEEVVDSQNVDCKISSSCRSQYARELLLHTPMVLEFLLQQSEKGFDCGTQSQEKNRKILRCLLSWVRVGCFSEIPQGSLPTHPLLNFVLKSLQDVASFDLAIEVLVELVSRHEVCITPYEQ

Homology

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BLAST of CSPI03G20140.1 vs. ExPASy Swiss-Prot
Match: Q9USZ2 (Uncharacterized protein C11G11.07 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPBC11G11.07 PE=4 SV=2)

HSP 1 Score: 88.6 bits (218), Expect = 1.2e-16
Identity = 75/259 (28.96%), Postives = 114/259 (44.02%), Query Frame = 0


Query: 10  AVHVLNHDTQSCNRVAANQWLVQFQQTGAAWEVATAILTSDHVQPSMSSFVPDLEVEFFA 69
           A+  L  +T    ++ AN +L +FQ++ AAW++  +IL  D            +E + FA
Sbjct: 7   ALATLYANTDREQKLQANNYLEEFQKSPAAWQICFSILNQDD---------SSIEAKLFA 66

Query: 70  AQILKRKIQNEGYLLQLGVKDALLNALLVAAKKFSSGPPQLLTQICLALSALILRTVEHG 129
           AQ L++KI  + + L         N+LL         P  LL  + + ++A+ L   E  
Sbjct: 67  AQTLRQKIVYDFHQLPKETHIEFRNSLLQLFLAAKDSPRPLLVSLAVCMAAIALHMTEWH 126

Query: 130 KPIDRLFYSLQNLQSVDNGNLAVLEMLTVLPEEVVDSQNVDCKISSSCRSQYARELLL-H 189
             I  +F   Q   S D     VL+ L+VLPEE  D +         C      ELL  +
Sbjct: 127 NVIADVF---QACSSKDPSGRCVLQFLSVLPEEASDPRKTSLSWEELCIR--VDELLRDN 186

Query: 190 TPMVLEFLLQQSEKGFDCGTQSQEKNRKILRCLLSWVRVGCFSEIPQGSLPTHPLLNFVL 249
            P VLE L+Q  +     G+ S      +L  L+SW+R     EIP   +   PL+    
Sbjct: 187 GPAVLELLVQYVDAVRASGSPSSADLGLVLTSLISWLR-----EIPLDKVMASPLIELAF 246

Query: 250 KSLQDVASFDLAIEVLVEL 268
           +SL D    + A+E L  L
Sbjct: 247 RSLDDDLLLEDAVEFLCAL 246

[Close]

BLAST of CSPI03G20140.1 vs. ExPASy Swiss-Prot
Match: A7YWD2 (Importin-13 OS=Bos taurus OX=9913 GN=IPO13 PE=2 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 1.6e-16
Identity = 80/269 (29.74%), Postives = 125/269 (46.47%), Query Frame = 0


Query: 7   VSQAVHVLNHDTQSCNRVAANQWLVQFQQTGAAWEVATAILTSDHVQPSMSSFVPDLEVE 66
           V +A+H L +D    N+  A +WL+Q Q +  AW  +  +L  D V           E++
Sbjct: 26  VEKALHQLYYDPNIENKNLAQKWLMQAQASPQAWHFSWQLLQPDKVP----------EIQ 85

Query: 67  FFAAQILKRKIQNEGYLLQLGVKDALLNALLVAAKKFSSGPPQLLTQICLALSALILRTV 126
           +F A  L  KI      +     ++L   L     +F+SG   +LT++C+AL++L L  +
Sbjct: 86  YFGASALHIKISRYWSDIPTDQYESLKAQLFTQITRFASGSKIVLTRLCVALASLALSMM 145

Query: 127 EHGKP-----IDRLFYSLQNLQSVDNGNLAVLEMLTVLPEEVVDSQNVDCKISSSCRSQY 186
               P     + RLF +  +        LA+LE+LTVLPEE   S+    +  S  R+  
Sbjct: 146 PDAWPCAVADMVRLFQAEDSPVDSQGRCLALLELLTVLPEEFQTSRLPQYR-KSLVRTSL 205

Query: 187 ARELLLHTPMVLEFLLQQSEKGFDCGTQSQEKNRKILRCLLSWVRVGCFSEIPQGSLPTH 246
           A E     P+ LE LLQQ      C  Q      K+L+C  SWV++    E+P       
Sbjct: 206 AVECGAVFPL-LEQLLQQPSSP-SCVRQ------KVLKCFSSWVQL----EVPLQD--CE 265

Query: 247 PLLNFVLKSLQDVASFDLAIEVLVELVSR 271
            L+     +LQD   FD ++E +V  +S+
Sbjct: 266 ALIQAAFAALQDSELFDSSVEAIVNAISQ 269

[Close]

BLAST of CSPI03G20140.1 vs. ExPASy Swiss-Prot
Match: Q8K0C1 (Importin-13 OS=Mus musculus OX=10090 GN=Ipo13 PE=1 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 4.7e-16
Identity = 79/269 (29.37%), Postives = 124/269 (46.10%), Query Frame = 0


Query: 7   VSQAVHVLNHDTQSCNRVAANQWLVQFQQTGAAWEVATAILTSDHVQPSMSSFVPDLEVE 66
           V +A+H L +D    N+  A +WL+Q Q +  AW  +  +L  D V           E++
Sbjct: 26  VEKALHQLYYDPNIDNKNLAQKWLMQAQVSPQAWHFSWQLLQPDKVP----------EIQ 85

Query: 67  FFAAQILKRKIQNEGYLLQLGVKDALLNALLVAAKKFSSGPPQLLTQICLALSALILRTV 126
           +F A  L  KI      +     ++L   L     +F+SG   +LT++C+AL++L L  +
Sbjct: 86  YFGASALHIKISRYWSDIPTDQYESLKAQLFTQITRFASGSKIVLTRLCVALASLALSMM 145

Query: 127 EHGKP-----IDRLFYSLQNLQSVDNGNLAVLEMLTVLPEEVVDSQNVDCKISSSCRSQY 186
               P     + RLF +  +        LA+LE+LTVLPEE   S+    +     R+  
Sbjct: 146 PDAWPCAVADMVRLFQAEDSPVDSQGRCLALLELLTVLPEEFQTSRLPQYR-KGLVRTSL 205

Query: 187 ARELLLHTPMVLEFLLQQSEKGFDCGTQSQEKNRKILRCLLSWVRVGCFSEIPQGSLPTH 246
           A E     P+ LE LLQQ      C  Q      K+L+C  SWV++    E+P       
Sbjct: 206 AVECGTVFPL-LEQLLQQPSSP-SCVRQ------KVLKCFSSWVQL----EVPLQD--CE 265

Query: 247 PLLNFVLKSLQDVASFDLAIEVLVELVSR 271
            L+     +LQD   FD ++E +V  +S+
Sbjct: 266 ALIQAAFAALQDSELFDSSVEAIVNAISQ 269

[Close]

BLAST of CSPI03G20140.1 vs. ExPASy Swiss-Prot
Match: Q8GUL2 (Transportin MOS14 OS=Arabidopsis thaliana OX=3702 GN=MOS14 PE=1 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 4.7e-16
Identity = 78/269 (29.00%), Postives = 119/269 (44.24%), Query Frame = 0


Query: 1   MELRMKVSQAVHVLNHDTQSCNRVAANQWLVQFQQTGAAWEVATAILTSDHVQPSMSSFV 60
           ME +  V +A++ L H      RV A++WL  FQ T  AW+VA      D++    SS  
Sbjct: 1   MEHQNAVKEALNALYHHPDDTVRVHADRWLQNFQGTLDAWQVA------DNLLHDSSS-- 60

Query: 61  PDLEVEFFAAQILKRKIQNEGYLLQLGVKDALLNALLVAAKKFSSGPPQLLTQICLALSA 120
            +LE   F +Q L+ K+Q +   L  G    L  +L    KKF  GPP++ TQI +A++A
Sbjct: 61  -NLETLIFCSQTLRSKVQRDFEELPPGAFQKLRQSLTTLLKKFHKGPPKVRTQISIAVAA 120

Query: 121 LILRTVEHGKPIDRLFYSLQNLQSVDNGNL-AVLEMLTVLPEEVVDSQNVDCKISSSCRS 180
           L +           +   L++   +    +   LE+LTVLPEE     N         R 
Sbjct: 121 LAVHVPAADWGDGGIISWLRDEMHMHPEYVPGFLELLTVLPEETF---NYKIAARPDRRR 180

Query: 181 QYARELLLHTPMVLEFLLQQSEKGFDCGTQSQEKNRKILRCLLSWVRVGCFSEIPQGSLP 240
           Q+ +EL       L  L            +  E   ++L    SW+R+     IP   L 
Sbjct: 181 QFEKELTSQMEAALSIL--------SACLKISELKEQVLEAFASWLRLR--HGIPGTVLA 240

Query: 241 THPLLNFVLKSLQDVASFDLAIEVLVELV 269
            HPL++  L SL      + ++ V+ EL+
Sbjct: 241 CHPLVHAALSSLNCDPLSEASVNVISELI 247

[Close]

BLAST of CSPI03G20140.1 vs. ExPASy Swiss-Prot
Match: O94829 (Importin-13 OS=Homo sapiens OX=9606 GN=IPO13 PE=1 SV=3)

HSP 1 Score: 85.9 bits (211), Expect = 8.0e-16
Identity = 79/269 (29.37%), Postives = 124/269 (46.10%), Query Frame = 0


Query: 7   VSQAVHVLNHDTQSCNRVAANQWLVQFQQTGAAWEVATAILTSDHVQPSMSSFVPDLEVE 66
           V +A+H L +D    N+  A +WL+Q Q +  AW  +  +L  D V           E++
Sbjct: 26  VEKALHQLYYDPNIENKNLAQKWLMQAQVSPQAWHFSWQLLQPDKVP----------EIQ 85

Query: 67  FFAAQILKRKIQNEGYLLQLGVKDALLNALLVAAKKFSSGPPQLLTQICLALSALILRTV 126
           +F A  L  KI      +     ++L   L     +F+SG   +LT++C+AL++L L  +
Sbjct: 86  YFGASALHIKISRYWSDIPTDQYESLKAQLFTQITRFASGSKIVLTRLCVALASLALSMM 145

Query: 127 EHGKP-----IDRLFYSLQNLQSVDNGNLAVLEMLTVLPEEVVDSQNVDCKISSSCRSQY 186
               P     + RLF +  +        LA+LE+LTVLPEE   S+    +     R+  
Sbjct: 146 PDAWPCAVADMVRLFQAEDSPVDGQGRCLALLELLTVLPEEFQTSRLPQYR-KGLVRTSL 205

Query: 187 ARELLLHTPMVLEFLLQQSEKGFDCGTQSQEKNRKILRCLLSWVRVGCFSEIPQGSLPTH 246
           A E     P+ LE LLQQ      C  Q      K+L+C  SWV++    E+P       
Sbjct: 206 AVECGAVFPL-LEQLLQQPSSP-SCVRQ------KVLKCFSSWVQL----EVPLQD--CE 265

Query: 247 PLLNFVLKSLQDVASFDLAIEVLVELVSR 271
            L+     +LQD   FD ++E +V  +S+
Sbjct: 266 ALIQAAFAALQDSELFDSSVEAIVNAISQ 269

[Close]

BLAST of CSPI03G20140.1 vs. ExPASy TrEMBL
Match: A0A5D3DX38 (Transportin-3 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold600G001410 PE=4 SV=1)

HSP 1 Score: 545.4 bits (1404), Expect = 1.4e-151
Identity = 275/280 (98.21%), Postives = 278/280 (99.29%), Query Frame = 0


Query: 1   MELRMKVSQAVHVLNHDTQSCNRVAANQWLVQFQQTGAAWEVATAILTSDHVQPSMSSFV 60
           MELRMKVSQAVHVLNHDTQSCNRVAANQWLVQFQQTGAAWEVATAILTSDHVQP +SSFV
Sbjct: 65  MELRMKVSQAVHVLNHDTQSCNRVAANQWLVQFQQTGAAWEVATAILTSDHVQPPLSSFV 124

Query: 61  PDLEVEFFAAQILKRKIQNEGYLLQLGVKDALLNALLVAAKKFSSGPPQLLTQICLALSA 120
           PDLEVEFFAAQILKRKIQNEGYLLQLGVKDALLNALLVAAKKFSSGPPQLLTQICLALSA
Sbjct: 125 PDLEVEFFAAQILKRKIQNEGYLLQLGVKDALLNALLVAAKKFSSGPPQLLTQICLALSA 184

Query: 121 LILRTVEHGKPIDRLFYSLQNLQSVDNGNLAVLEMLTVLPEEVVDSQNVDCKISSSCRSQ 180
           LILRTVEHGKPIDRLFYSLQNLQSVDNGNLAVLEMLTVLPEEVVDSQNVDCKISSSCRSQ
Sbjct: 185 LILRTVEHGKPIDRLFYSLQNLQSVDNGNLAVLEMLTVLPEEVVDSQNVDCKISSSCRSQ 244

Query: 181 YARELLLHTPMVLEFLLQQSEKGFDCGTQSQEKNRKILRCLLSWVRVGCFSEIPQGSLPT 240
           YARELLLHTPMVLEFLLQQSEKGFDCGTQ QEKNRKILRCLLSWVRVGCFSEIPQGSLPT
Sbjct: 245 YARELLLHTPMVLEFLLQQSEKGFDCGTQPQEKNRKILRCLLSWVRVGCFSEIPQGSLPT 304

Query: 241 HPLLNFVLKSLQDVASFDLAIEVLVELVSRHEVCITPYEQ 281
           HPLLNFVLKSLQDVASFDLAIEVLVELVSRHEVC+TPY+Q
Sbjct: 305 HPLLNFVLKSLQDVASFDLAIEVLVELVSRHEVCVTPYKQ 344

[Close]

BLAST of CSPI03G20140.1 vs. ExPASy TrEMBL
Match: A0A0A0LAK7 (Xpo1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G254030 PE=4 SV=1)

HSP 1 Score: 534.6 bits (1376), Expect = 2.4e-148
Identity = 272/272 (100.00%), Postives = 272/272 (100.00%), Query Frame = 0


Query: 1   MELRMKVSQAVHVLNHDTQSCNRVAANQWLVQFQQTGAAWEVATAILTSDHVQPSMSSFV 60
           MELRMKVSQAVHVLNHDTQSCNRVAANQWLVQFQQTGAAWEVATAILTSDHVQPSMSSFV
Sbjct: 1   MELRMKVSQAVHVLNHDTQSCNRVAANQWLVQFQQTGAAWEVATAILTSDHVQPSMSSFV 60

Query: 61  PDLEVEFFAAQILKRKIQNEGYLLQLGVKDALLNALLVAAKKFSSGPPQLLTQICLALSA 120
           PDLEVEFFAAQILKRKIQNEGYLLQLGVKDALLNALLVAAKKFSSGPPQLLTQICLALSA
Sbjct: 61  PDLEVEFFAAQILKRKIQNEGYLLQLGVKDALLNALLVAAKKFSSGPPQLLTQICLALSA 120

Query: 121 LILRTVEHGKPIDRLFYSLQNLQSVDNGNLAVLEMLTVLPEEVVDSQNVDCKISSSCRSQ 180
           LILRTVEHGKPIDRLFYSLQNLQSVDNGNLAVLEMLTVLPEEVVDSQNVDCKISSSCRSQ
Sbjct: 121 LILRTVEHGKPIDRLFYSLQNLQSVDNGNLAVLEMLTVLPEEVVDSQNVDCKISSSCRSQ 180

Query: 181 YARELLLHTPMVLEFLLQQSEKGFDCGTQSQEKNRKILRCLLSWVRVGCFSEIPQGSLPT 240
           YARELLLHTPMVLEFLLQQSEKGFDCGTQSQEKNRKILRCLLSWVRVGCFSEIPQGSLPT
Sbjct: 181 YARELLLHTPMVLEFLLQQSEKGFDCGTQSQEKNRKILRCLLSWVRVGCFSEIPQGSLPT 240

Query: 241 HPLLNFVLKSLQDVASFDLAIEVLVELVSRHE 273
           HPLLNFVLKSLQDVASFDLAIEVLVELVSRHE
Sbjct: 241 HPLLNFVLKSLQDVASFDLAIEVLVELVSRHE 272

[Close]

BLAST of CSPI03G20140.1 vs. ExPASy TrEMBL
Match: A0A1S3BN70 (transportin-3 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103491690 PE=4 SV=1)

HSP 1 Score: 529.6 bits (1363), Expect = 7.7e-147
Identity = 269/272 (98.90%), Postives = 270/272 (99.26%), Query Frame = 0


Query: 1   MELRMKVSQAVHVLNHDTQSCNRVAANQWLVQFQQTGAAWEVATAILTSDHVQPSMSSFV 60
           MELRMKVSQAVHVLNHDTQSCNRVAANQWLVQFQQTGAAWEVATAILTSDHVQP +SSFV
Sbjct: 1   MELRMKVSQAVHVLNHDTQSCNRVAANQWLVQFQQTGAAWEVATAILTSDHVQPPLSSFV 60

Query: 61  PDLEVEFFAAQILKRKIQNEGYLLQLGVKDALLNALLVAAKKFSSGPPQLLTQICLALSA 120
           PDLEVEFFAAQILKRKIQNEGYLLQLGVKDALLNALLVAAKKFSSGPPQLLTQICLALSA
Sbjct: 61  PDLEVEFFAAQILKRKIQNEGYLLQLGVKDALLNALLVAAKKFSSGPPQLLTQICLALSA 120

Query: 121 LILRTVEHGKPIDRLFYSLQNLQSVDNGNLAVLEMLTVLPEEVVDSQNVDCKISSSCRSQ 180
           LILRTVEHGKPIDRLFYSLQNLQSVDNGNLAVLEMLTVLPEEVVDSQNVDCKISSSCRSQ
Sbjct: 121 LILRTVEHGKPIDRLFYSLQNLQSVDNGNLAVLEMLTVLPEEVVDSQNVDCKISSSCRSQ 180

Query: 181 YARELLLHTPMVLEFLLQQSEKGFDCGTQSQEKNRKILRCLLSWVRVGCFSEIPQGSLPT 240
           YARELLLHTPMVLEFLLQQSEKGFDCGTQ QEKNRKILRCLLSWVRVGCFSEIPQGSLPT
Sbjct: 181 YARELLLHTPMVLEFLLQQSEKGFDCGTQPQEKNRKILRCLLSWVRVGCFSEIPQGSLPT 240

Query: 241 HPLLNFVLKSLQDVASFDLAIEVLVELVSRHE 273
           HPLLNFVLKSLQDVASFDLAIEVLVELVSRHE
Sbjct: 241 HPLLNFVLKSLQDVASFDLAIEVLVELVSRHE 272

[Close]

BLAST of CSPI03G20140.1 vs. ExPASy TrEMBL
Match: A0A5A7U4I2 (Transportin-3 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold61G001460 PE=4 SV=1)

HSP 1 Score: 529.6 bits (1363), Expect = 7.7e-147
Identity = 269/272 (98.90%), Postives = 270/272 (99.26%), Query Frame = 0


Query: 1   MELRMKVSQAVHVLNHDTQSCNRVAANQWLVQFQQTGAAWEVATAILTSDHVQPSMSSFV 60
           MELRMKVSQAVHVLNHDTQSCNRVAANQWLVQFQQTGAAWEVATAILTSDHVQP +SSFV
Sbjct: 65  MELRMKVSQAVHVLNHDTQSCNRVAANQWLVQFQQTGAAWEVATAILTSDHVQPPLSSFV 124

Query: 61  PDLEVEFFAAQILKRKIQNEGYLLQLGVKDALLNALLVAAKKFSSGPPQLLTQICLALSA 120
           PDLEVEFFAAQILKRKIQNEGYLLQLGVKDALLNALLVAAKKFSSGPPQLLTQICLALSA
Sbjct: 125 PDLEVEFFAAQILKRKIQNEGYLLQLGVKDALLNALLVAAKKFSSGPPQLLTQICLALSA 184

Query: 121 LILRTVEHGKPIDRLFYSLQNLQSVDNGNLAVLEMLTVLPEEVVDSQNVDCKISSSCRSQ 180
           LILRTVEHGKPIDRLFYSLQNLQSVDNGNLAVLEMLTVLPEEVVDSQNVDCKISSSCRSQ
Sbjct: 185 LILRTVEHGKPIDRLFYSLQNLQSVDNGNLAVLEMLTVLPEEVVDSQNVDCKISSSCRSQ 244

Query: 181 YARELLLHTPMVLEFLLQQSEKGFDCGTQSQEKNRKILRCLLSWVRVGCFSEIPQGSLPT 240
           YARELLLHTPMVLEFLLQQSEKGFDCGTQ QEKNRKILRCLLSWVRVGCFSEIPQGSLPT
Sbjct: 245 YARELLLHTPMVLEFLLQQSEKGFDCGTQPQEKNRKILRCLLSWVRVGCFSEIPQGSLPT 304

Query: 241 HPLLNFVLKSLQDVASFDLAIEVLVELVSRHE 273
           HPLLNFVLKSLQDVASFDLAIEVLVELVSRHE
Sbjct: 305 HPLLNFVLKSLQDVASFDLAIEVLVELVSRHE 336

[Close]

BLAST of CSPI03G20140.1 vs. ExPASy TrEMBL
Match: A0A6J1J969 (transportin-3 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111482450 PE=4 SV=1)

HSP 1 Score: 518.1 bits (1333), Expect = 2.3e-143
Identity = 263/272 (96.69%), Postives = 266/272 (97.79%), Query Frame = 0


Query: 1   MELRMKVSQAVHVLNHDTQSCNRVAANQWLVQFQQTGAAWEVATAILTSDHVQPSMSSFV 60
           MELRMKVSQAVHVLNHDTQSCNRVAANQWLVQFQQTGAAWEVATAILTSDHVQ  +SSFV
Sbjct: 1   MELRMKVSQAVHVLNHDTQSCNRVAANQWLVQFQQTGAAWEVATAILTSDHVQLPLSSFV 60

Query: 61  PDLEVEFFAAQILKRKIQNEGYLLQLGVKDALLNALLVAAKKFSSGPPQLLTQICLALSA 120
           PDLEVEFFAAQILKRKIQNEG+LLQLGVKDALLNALLVAAKKFSSGPPQLLTQICLALSA
Sbjct: 61  PDLEVEFFAAQILKRKIQNEGHLLQLGVKDALLNALLVAAKKFSSGPPQLLTQICLALSA 120

Query: 121 LILRTVEHGKPIDRLFYSLQNLQSVDNGNLAVLEMLTVLPEEVVDSQNVDCKISSSCRSQ 180
           LILRTVEHGKPIDRLFYSLQNLQSVDNGNLAVLEMLTVLPEEVVD+QN DCKISSSCRSQ
Sbjct: 121 LILRTVEHGKPIDRLFYSLQNLQSVDNGNLAVLEMLTVLPEEVVDNQNADCKISSSCRSQ 180

Query: 181 YARELLLHTPMVLEFLLQQSEKGFDCGTQSQEKNRKILRCLLSWVRVGCFSEIPQGSLPT 240
           YARELLLHTPMVLEFLLQQSEKGFDCGTQ QEKNRKILRCLLSWVRVGCFSEIPQGSLPT
Sbjct: 181 YARELLLHTPMVLEFLLQQSEKGFDCGTQMQEKNRKILRCLLSWVRVGCFSEIPQGSLPT 240

Query: 241 HPLLNFVLKSLQDVASFDLAIEVLVELVSRHE 273
           HPLLNFVLKSLQD  SFDLAIEVLVELVSRHE
Sbjct: 241 HPLLNFVLKSLQDATSFDLAIEVLVELVSRHE 272

[Close]

BLAST of CSPI03G20140.1 vs. NCBI nr
Match: TYK28316.1 (transportin-3 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 545.4 bits (1404), Expect = 2.8e-151
Identity = 275/280 (98.21%), Postives = 278/280 (99.29%), Query Frame = 0


Query: 1   MELRMKVSQAVHVLNHDTQSCNRVAANQWLVQFQQTGAAWEVATAILTSDHVQPSMSSFV 60
           MELRMKVSQAVHVLNHDTQSCNRVAANQWLVQFQQTGAAWEVATAILTSDHVQP +SSFV
Sbjct: 65  MELRMKVSQAVHVLNHDTQSCNRVAANQWLVQFQQTGAAWEVATAILTSDHVQPPLSSFV 124

Query: 61  PDLEVEFFAAQILKRKIQNEGYLLQLGVKDALLNALLVAAKKFSSGPPQLLTQICLALSA 120
           PDLEVEFFAAQILKRKIQNEGYLLQLGVKDALLNALLVAAKKFSSGPPQLLTQICLALSA
Sbjct: 125 PDLEVEFFAAQILKRKIQNEGYLLQLGVKDALLNALLVAAKKFSSGPPQLLTQICLALSA 184

Query: 121 LILRTVEHGKPIDRLFYSLQNLQSVDNGNLAVLEMLTVLPEEVVDSQNVDCKISSSCRSQ 180
           LILRTVEHGKPIDRLFYSLQNLQSVDNGNLAVLEMLTVLPEEVVDSQNVDCKISSSCRSQ
Sbjct: 185 LILRTVEHGKPIDRLFYSLQNLQSVDNGNLAVLEMLTVLPEEVVDSQNVDCKISSSCRSQ 244

Query: 181 YARELLLHTPMVLEFLLQQSEKGFDCGTQSQEKNRKILRCLLSWVRVGCFSEIPQGSLPT 240
           YARELLLHTPMVLEFLLQQSEKGFDCGTQ QEKNRKILRCLLSWVRVGCFSEIPQGSLPT
Sbjct: 245 YARELLLHTPMVLEFLLQQSEKGFDCGTQPQEKNRKILRCLLSWVRVGCFSEIPQGSLPT 304

Query: 241 HPLLNFVLKSLQDVASFDLAIEVLVELVSRHEVCITPYEQ 281
           HPLLNFVLKSLQDVASFDLAIEVLVELVSRHEVC+TPY+Q
Sbjct: 305 HPLLNFVLKSLQDVASFDLAIEVLVELVSRHEVCVTPYKQ 344

[Close]

BLAST of CSPI03G20140.1 vs. NCBI nr
Match: XP_011651341.1 (transportin-3 isoform X1 [Cucumis sativus] >KAE8650561.1 hypothetical protein Csa_009564 [Cucumis sativus])

HSP 1 Score: 534.6 bits (1376), Expect = 5.0e-148
Identity = 272/272 (100.00%), Postives = 272/272 (100.00%), Query Frame = 0


Query: 1   MELRMKVSQAVHVLNHDTQSCNRVAANQWLVQFQQTGAAWEVATAILTSDHVQPSMSSFV 60
           MELRMKVSQAVHVLNHDTQSCNRVAANQWLVQFQQTGAAWEVATAILTSDHVQPSMSSFV
Sbjct: 1   MELRMKVSQAVHVLNHDTQSCNRVAANQWLVQFQQTGAAWEVATAILTSDHVQPSMSSFV 60

Query: 61  PDLEVEFFAAQILKRKIQNEGYLLQLGVKDALLNALLVAAKKFSSGPPQLLTQICLALSA 120
           PDLEVEFFAAQILKRKIQNEGYLLQLGVKDALLNALLVAAKKFSSGPPQLLTQICLALSA
Sbjct: 61  PDLEVEFFAAQILKRKIQNEGYLLQLGVKDALLNALLVAAKKFSSGPPQLLTQICLALSA 120

Query: 121 LILRTVEHGKPIDRLFYSLQNLQSVDNGNLAVLEMLTVLPEEVVDSQNVDCKISSSCRSQ 180
           LILRTVEHGKPIDRLFYSLQNLQSVDNGNLAVLEMLTVLPEEVVDSQNVDCKISSSCRSQ
Sbjct: 121 LILRTVEHGKPIDRLFYSLQNLQSVDNGNLAVLEMLTVLPEEVVDSQNVDCKISSSCRSQ 180

Query: 181 YARELLLHTPMVLEFLLQQSEKGFDCGTQSQEKNRKILRCLLSWVRVGCFSEIPQGSLPT 240
           YARELLLHTPMVLEFLLQQSEKGFDCGTQSQEKNRKILRCLLSWVRVGCFSEIPQGSLPT
Sbjct: 181 YARELLLHTPMVLEFLLQQSEKGFDCGTQSQEKNRKILRCLLSWVRVGCFSEIPQGSLPT 240

Query: 241 HPLLNFVLKSLQDVASFDLAIEVLVELVSRHE 273
           HPLLNFVLKSLQDVASFDLAIEVLVELVSRHE
Sbjct: 241 HPLLNFVLKSLQDVASFDLAIEVLVELVSRHE 272

[Close]

BLAST of CSPI03G20140.1 vs. NCBI nr
Match: XP_031739063.1 (transportin MOS14 isoform X2 [Cucumis sativus])

HSP 1 Score: 534.6 bits (1376), Expect = 5.0e-148
Identity = 272/272 (100.00%), Postives = 272/272 (100.00%), Query Frame = 0


Query: 1   MELRMKVSQAVHVLNHDTQSCNRVAANQWLVQFQQTGAAWEVATAILTSDHVQPSMSSFV 60
           MELRMKVSQAVHVLNHDTQSCNRVAANQWLVQFQQTGAAWEVATAILTSDHVQPSMSSFV
Sbjct: 1   MELRMKVSQAVHVLNHDTQSCNRVAANQWLVQFQQTGAAWEVATAILTSDHVQPSMSSFV 60

Query: 61  PDLEVEFFAAQILKRKIQNEGYLLQLGVKDALLNALLVAAKKFSSGPPQLLTQICLALSA 120
           PDLEVEFFAAQILKRKIQNEGYLLQLGVKDALLNALLVAAKKFSSGPPQLLTQICLALSA
Sbjct: 61  PDLEVEFFAAQILKRKIQNEGYLLQLGVKDALLNALLVAAKKFSSGPPQLLTQICLALSA 120

Query: 121 LILRTVEHGKPIDRLFYSLQNLQSVDNGNLAVLEMLTVLPEEVVDSQNVDCKISSSCRSQ 180
           LILRTVEHGKPIDRLFYSLQNLQSVDNGNLAVLEMLTVLPEEVVDSQNVDCKISSSCRSQ
Sbjct: 121 LILRTVEHGKPIDRLFYSLQNLQSVDNGNLAVLEMLTVLPEEVVDSQNVDCKISSSCRSQ 180

Query: 181 YARELLLHTPMVLEFLLQQSEKGFDCGTQSQEKNRKILRCLLSWVRVGCFSEIPQGSLPT 240
           YARELLLHTPMVLEFLLQQSEKGFDCGTQSQEKNRKILRCLLSWVRVGCFSEIPQGSLPT
Sbjct: 181 YARELLLHTPMVLEFLLQQSEKGFDCGTQSQEKNRKILRCLLSWVRVGCFSEIPQGSLPT 240

Query: 241 HPLLNFVLKSLQDVASFDLAIEVLVELVSRHE 273
           HPLLNFVLKSLQDVASFDLAIEVLVELVSRHE
Sbjct: 241 HPLLNFVLKSLQDVASFDLAIEVLVELVSRHE 272

[Close]

BLAST of CSPI03G20140.1 vs. NCBI nr
Match: KAA0048525.1 (transportin-3 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 529.6 bits (1363), Expect = 1.6e-146
Identity = 269/272 (98.90%), Postives = 270/272 (99.26%), Query Frame = 0


Query: 1   MELRMKVSQAVHVLNHDTQSCNRVAANQWLVQFQQTGAAWEVATAILTSDHVQPSMSSFV 60
           MELRMKVSQAVHVLNHDTQSCNRVAANQWLVQFQQTGAAWEVATAILTSDHVQP +SSFV
Sbjct: 65  MELRMKVSQAVHVLNHDTQSCNRVAANQWLVQFQQTGAAWEVATAILTSDHVQPPLSSFV 124

Query: 61  PDLEVEFFAAQILKRKIQNEGYLLQLGVKDALLNALLVAAKKFSSGPPQLLTQICLALSA 120
           PDLEVEFFAAQILKRKIQNEGYLLQLGVKDALLNALLVAAKKFSSGPPQLLTQICLALSA
Sbjct: 125 PDLEVEFFAAQILKRKIQNEGYLLQLGVKDALLNALLVAAKKFSSGPPQLLTQICLALSA 184

Query: 121 LILRTVEHGKPIDRLFYSLQNLQSVDNGNLAVLEMLTVLPEEVVDSQNVDCKISSSCRSQ 180
           LILRTVEHGKPIDRLFYSLQNLQSVDNGNLAVLEMLTVLPEEVVDSQNVDCKISSSCRSQ
Sbjct: 185 LILRTVEHGKPIDRLFYSLQNLQSVDNGNLAVLEMLTVLPEEVVDSQNVDCKISSSCRSQ 244

Query: 181 YARELLLHTPMVLEFLLQQSEKGFDCGTQSQEKNRKILRCLLSWVRVGCFSEIPQGSLPT 240
           YARELLLHTPMVLEFLLQQSEKGFDCGTQ QEKNRKILRCLLSWVRVGCFSEIPQGSLPT
Sbjct: 245 YARELLLHTPMVLEFLLQQSEKGFDCGTQPQEKNRKILRCLLSWVRVGCFSEIPQGSLPT 304

Query: 241 HPLLNFVLKSLQDVASFDLAIEVLVELVSRHE 273
           HPLLNFVLKSLQDVASFDLAIEVLVELVSRHE
Sbjct: 305 HPLLNFVLKSLQDVASFDLAIEVLVELVSRHE 336

[Close]

BLAST of CSPI03G20140.1 vs. NCBI nr
Match: XP_008449959.1 (PREDICTED: transportin-3 isoform X1 [Cucumis melo] >XP_016900839.1 PREDICTED: transportin-3 isoform X1 [Cucumis melo] >XP_016900840.1 PREDICTED: transportin-3 isoform X1 [Cucumis melo])

HSP 1 Score: 529.6 bits (1363), Expect = 1.6e-146
Identity = 269/272 (98.90%), Postives = 270/272 (99.26%), Query Frame = 0


Query: 1   MELRMKVSQAVHVLNHDTQSCNRVAANQWLVQFQQTGAAWEVATAILTSDHVQPSMSSFV 60
           MELRMKVSQAVHVLNHDTQSCNRVAANQWLVQFQQTGAAWEVATAILTSDHVQP +SSFV
Sbjct: 1   MELRMKVSQAVHVLNHDTQSCNRVAANQWLVQFQQTGAAWEVATAILTSDHVQPPLSSFV 60

Query: 61  PDLEVEFFAAQILKRKIQNEGYLLQLGVKDALLNALLVAAKKFSSGPPQLLTQICLALSA 120
           PDLEVEFFAAQILKRKIQNEGYLLQLGVKDALLNALLVAAKKFSSGPPQLLTQICLALSA
Sbjct: 61  PDLEVEFFAAQILKRKIQNEGYLLQLGVKDALLNALLVAAKKFSSGPPQLLTQICLALSA 120

Query: 121 LILRTVEHGKPIDRLFYSLQNLQSVDNGNLAVLEMLTVLPEEVVDSQNVDCKISSSCRSQ 180
           LILRTVEHGKPIDRLFYSLQNLQSVDNGNLAVLEMLTVLPEEVVDSQNVDCKISSSCRSQ
Sbjct: 121 LILRTVEHGKPIDRLFYSLQNLQSVDNGNLAVLEMLTVLPEEVVDSQNVDCKISSSCRSQ 180

Query: 181 YARELLLHTPMVLEFLLQQSEKGFDCGTQSQEKNRKILRCLLSWVRVGCFSEIPQGSLPT 240
           YARELLLHTPMVLEFLLQQSEKGFDCGTQ QEKNRKILRCLLSWVRVGCFSEIPQGSLPT
Sbjct: 181 YARELLLHTPMVLEFLLQQSEKGFDCGTQPQEKNRKILRCLLSWVRVGCFSEIPQGSLPT 240

Query: 241 HPLLNFVLKSLQDVASFDLAIEVLVELVSRHE 273
           HPLLNFVLKSLQDVASFDLAIEVLVELVSRHE
Sbjct: 241 HPLLNFVLKSLQDVASFDLAIEVLVELVSRHE 272

[Close]

BLAST of CSPI03G20140.1 vs. TAIR 10
Match: AT1G12930.1 (ARM repeat superfamily protein )

HSP 1 Score: 316.2 bits (809), Expect = 2.6e-86
Identity = 169/272 (62.13%), Postives = 211/272 (77.57%), Query Frame = 0


Query: 1   MELRMKVSQAVHVLNHDTQSCNRVAANQWLVQFQQTGAAWEVATAILTSDHVQPSMSSFV 60
           MEL+ KV++A+HVLNHD +S NRVAANQWLVQFQ T AAW+V+T++LTS    P +S F 
Sbjct: 1   MELQRKVAEAIHVLNHDPESSNRVAANQWLVQFQLTPAAWDVSTSLLTS----PIVSLF- 60

Query: 61  PDLEVEFFAAQILKRKIQNEGYLLQLGVKDALLNALLVAAKKFSSGPPQLLTQICLALSA 120
              +++FFAAQIL+RKIQNE   LQ   KDALLNALL+AAK++SSG PQLLTQICLALSA
Sbjct: 61  ---DLQFFAAQILRRKIQNEASNLQSTAKDALLNALLLAAKRYSSGVPQLLTQICLALSA 120

Query: 121 LILRTVEHGKPIDRLFYSLQNLQSVDNGNLAVLEMLTVLPEEVVDSQNVDCKISSSCRSQ 180
           L+L +  + KP D+L ++LQNLQ+ D+GN+ +LE+LTVLPEE+ D+++       S  S 
Sbjct: 121 LLLHSDPYSKPFDKLMFALQNLQAHDDGNVVLLELLTVLPEEISDTRHF------SHHSD 180

Query: 181 YARELLLHTPMVLEFLLQQSEKGFDCGTQSQEKNRKILRCLLSWVRVGCFSEIPQGSLPT 240
             +ELL HT MVL+FLLQQSE  F       + NRKILRCLLSWVR GCFSEIPQG++P+
Sbjct: 181 LRQELLSHTSMVLDFLLQQSENQFVSPLYPHDNNRKILRCLLSWVRAGCFSEIPQGAVPS 240

Query: 241 HPLLNFVLKSLQDVASFDLAIEVLVELVSRHE 273
           HPLLN+V  +LQ   +FDLAIEVLVELV+RHE
Sbjct: 241 HPLLNYVFNALQG-TTFDLAIEVLVELVTRHE 257

[Close]

BLAST of CSPI03G20140.1 vs. TAIR 10
Match: AT5G62600.1 (ARM repeat superfamily protein )

HSP 1 Score: 86.7 bits (213), Expect = 3.3e-17
Identity = 78/269 (29.00%), Postives = 119/269 (44.24%), Query Frame = 0


Query: 1   MELRMKVSQAVHVLNHDTQSCNRVAANQWLVQFQQTGAAWEVATAILTSDHVQPSMSSFV 60
           ME +  V +A++ L H      RV A++WL  FQ T  AW+VA      D++    SS  
Sbjct: 1   MEHQNAVKEALNALYHHPDDTVRVHADRWLQNFQGTLDAWQVA------DNLLHDSSS-- 60

Query: 61  PDLEVEFFAAQILKRKIQNEGYLLQLGVKDALLNALLVAAKKFSSGPPQLLTQICLALSA 120
            +LE   F +Q L+ K+Q +   L  G    L  +L    KKF  GPP++ TQI +A++A
Sbjct: 61  -NLETLIFCSQTLRSKVQRDFEELPPGAFQKLRQSLTTLLKKFHKGPPKVRTQISIAVAA 120

Query: 121 LILRTVEHGKPIDRLFYSLQNLQSVDNGNL-AVLEMLTVLPEEVVDSQNVDCKISSSCRS 180
           L +           +   L++   +    +   LE+LTVLPEE     N         R 
Sbjct: 121 LAVHVPAADWGDGGIISWLRDEMHMHPEYVPGFLELLTVLPEETF---NYKIAARPDRRR 180

Query: 181 QYARELLLHTPMVLEFLLQQSEKGFDCGTQSQEKNRKILRCLLSWVRVGCFSEIPQGSLP 240
           Q+ +EL       L  L            +  E   ++L    SW+R+     IP   L 
Sbjct: 181 QFEKELTSQMEAALSIL--------SACLKISELKEQVLEAFASWLRLR--HGIPGTVLA 240

Query: 241 THPLLNFVLKSLQDVASFDLAIEVLVELV 269
            HPL++  L SL      + ++ V+ EL+
Sbjct: 241 CHPLVHAALSSLNCDPLSEASVNVISELI 247

The following BLAST results are available for this feature:

BLAST of CSPI03G20140.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9USZ2	1.2e-16	28.96	Uncharacterized protein C11G11.07 OS=Schizosaccharomyces pombe (strain 972 / ATC...	[more]
A7YWD2	1.6e-16	29.74	Importin-13 OS=Bos taurus OX=9913 GN=IPO13 PE=2 SV=1	[more]
Q8K0C1	4.7e-16	29.37	Importin-13 OS=Mus musculus OX=10090 GN=Ipo13 PE=1 SV=1	[more]
Q8GUL2	4.7e-16	29.00	Transportin MOS14 OS=Arabidopsis thaliana OX=3702 GN=MOS14 PE=1 SV=1	[more]
O94829	8.0e-16	29.37	Importin-13 OS=Homo sapiens OX=9606 GN=IPO13 PE=1 SV=3	[more]

BLAST of CSPI03G20140.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DX38	1.4e-151	98.21	Transportin-3 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]
A0A0A0LAK7	2.4e-148	100.00	Xpo1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G254030 PE=4 S...	[more]
A0A1S3BN70	7.7e-147	98.90	transportin-3 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103491690 PE=4 SV=1	[more]
A0A5A7U4I2	7.7e-147	98.90	Transportin-3 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffol...	[more]
A0A6J1J969	2.3e-143	96.69	transportin-3 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111482450 PE=4 SV=1	[more]

BLAST of CSPI03G20140.1 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK28316.1	2.8e-151	98.21	transportin-3 isoform X1 [Cucumis melo var. makuwa]	[more]
XP_011651341.1	5.0e-148	100.00	transportin-3 isoform X1 [Cucumis sativus] >KAE8650561.1 hypothetical protein Cs...	[more]
XP_031739063.1	5.0e-148	100.00	transportin MOS14 isoform X2 [Cucumis sativus]	[more]
KAA0048525.1	1.6e-146	98.90	transportin-3 isoform X1 [Cucumis melo var. makuwa]	[more]
XP_008449959.1	1.6e-146	98.90	PREDICTED: transportin-3 isoform X1 [Cucumis melo] >XP_016900839.1 PREDICTED: tr...	[more]

BLAST of CSPI03G20140.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G12930.1	2.6e-86	62.13	ARM repeat superfamily protein	[more]
AT5G62600.1	3.3e-17	29.00	ARM repeat superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013598	Exportin-1/Importin-beta-like	PFAM	PF08389	Xpo1	coord: 107..264 e-value: 5.5E-19 score: 68.7
IPR011989	Armadillo-like helical	GENE3D	1.25.10.10		coord: 4..279 e-value: 1.1E-70 score: 240.9
None	No IPR available	PANTHER	PTHR12363:SF44	ARM REPEAT SUPERFAMILY PROTEIN	coord: 1..273
None	No IPR available	PANTHER	PTHR12363	TRANSPORTIN 3 AND IMPORTIN 13	coord: 1..273
IPR016024	Armadillo-type fold	SUPERFAMILY	48371	ARM repeat	coord: 1..278

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CSPI03G20140	CSPI03G20140	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CSPI03G20140.mrna.cds.6	CSPI03G20140.mrna.cds.6	CDS
CSPI03G20140.mrna.cds.5	CSPI03G20140.mrna.cds.5	CDS
CSPI03G20140.mrna.cds.4	CSPI03G20140.mrna.cds.4	CDS
CSPI03G20140.mrna.cds.3	CSPI03G20140.mrna.cds.3	CDS
CSPI03G20140.mrna.cds.2	CSPI03G20140.mrna.cds.2	CDS
CSPI03G20140.mrna.cds.1	CSPI03G20140.mrna.cds.1	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CSPI03G20140.1	CSPI03G20140.1-protein	polypeptide