CSPI02G19510.1 (mRNA) Cucumber (PI 183967) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAATAGTCTTAAACCCTAATTTTGCTTTTCTTTCTTTCTTTATTTTTGAAAGAAAAATATAAACCCTAATATTCGCTTGACAGCAGCGAAGCCACTGGGAGCAGCAAACGGACACGTCAGGAAACTGCCGCCAAGTACTTCTTCGAAATTGTCTTAAAACTCTGCCGAGAAAGTTAGACCGGATTGATCACCTTCCCCGGACCTCCACATCGCCGTTCAGTTACTATGAAGGCCGTTCGCCTTCTTTTTTCCCTTAGACCAGTAACTACCTTGCCTTCGCCATCGGTAGCGTTATTCTCTTCGTCTTCATCATTAATCACTAAGTCGATGAACTCCGTCGCCACTGAGGCAAAGAAGCAAGGTTCTGTATACGAACATCAGCCGAAATTTAAGTGGAAGTCTGCTAATTTCTTTGGTACAGTTGAACGGCCCCTTAAAGTGACTACCAGGAACTGTCGCACGGTTAGGGCTTGGACAATTCTTCGTGCCAAAGCCTCTCCAGATTCTAGCAGCAGTTTTAGGTACTTTCTTCCATAGTGTGTAATTTTTTGAAAACAGTCATTTTATTAGCTGCCGTATGAACATCACTTTTTATTTTGTTTTATTCCACTGCTTTGTCCTCTCCTGTTTTTGTTTTCGCTGTTTTGTTTGAATAGAGGTTCAAGCTGAGTGAATATACATAGCGGGTCTTTCTTTTAGCGTGCTGGGTTTACGCTGTTAATTGCAATTCCAGTCCCTGTTAATCTTTCTGACGTTCTGGCATTGGATAATGCTGTAAAAAATTGCCCCTTCAGTATGCGACTAAATTCCCCTGTATTGGTTAATGATTTTATACATGCACGTTTGTAGGATCTTTCTGAAACTGGAGAAAGAGATGGCTGAATCATGGATTGAACGTCTTAAACCCAATGACTACGTCAATGTTGCTGGTCCTTTAGAGTCTTATAAGAAGGTTGGAAAGTACGGGAAGTCTTATTTATCTTACCAGGTTAGATGCTTTAGTATTCACATGATGATATTCCTTTTTTTATTTGTATTTGGAACATTTTTCATATTGTTTAACATTTTTACTCATCGTGTTGACTTCTTATCCTTTGTTTAGGAGCTAAATTCTTTTTCGCATCTGGATGAGGACTTTTTTTTTTAAAAAAAAAAAATCTTTCGATACCCTGGCTAATATGCACGGTCACTCAACAAGCTATTTTTTTAATATGAATCTTGTATTGGCATTTGATCTCCTTTCCAGTTAGGGTTGGGATTCTTTTTTCCTTTTAAACGGCAGGATCTTCTGACCATTCAAATACTTTAAAAAACTTGCAGCATATTAAGTTATTCAGGACAGTGGCAGTAGATTTGCTGTACATATACTTCAATCTGGATGTGGATACTGAAAGATGTGTTTGTAATTTGACAGATGAGTTGGATTGAAGCACTGTGTTGTCTTTATTCTTCCAATTGAGACACTGTCCTCTGTTATTTACTATTAAAACGCGTTATCCAATTCATCCTTCCATTTGGGTCCCTTCTGGCTACATCAACCTTACTAGTTCCTTCTGTAGAGATGGTTTAACTGCCTCATGGAGTAATTGGAAGTTCTCACTGTAATTTCTGTTGAAGTCTTTGTTTTTTACAAAAAACATAATCTATCAGTTTCGTGAGATTTAAGTTCTCCTGTCATGCTTTTTTTAAACTAGACTTGTACATATTCAACATGGTCACACCTGCAGATTAGTATTTATATCTGTCTTTTTTTTTTTTTCTTTAATTTTAATTGTTTTTCCTGCAGTTAACTGTCTCGGAGTTAAATTGCATTGCACATAATGATCAAGGCTCAAAAAGTCAAAATTCTGTAGGCATGTTACATGAAGAAGGTACGTTTTGAATCTTGTCTTTTCAGTTGATTGAAACTTTAGTAATGCATAGAAATAAATAAAACGTGTTATTTTGTTTCTGCTTTAAATTACTTCAGTTCTGCTGACTGAATGAAATTCAGTTTGTTGCGTGAACAATGGTATTGTGAATTTAACTAACGTGATGCTGAGAGGGTATTTTCCCCATGGCTTCTGAAAAGTAAACGAGGAAGAGTTTTCTTGCTTGAAACATCCCAAAATCATATTTAGTTGGATGGCAGTCCACTTTGTGTTTATTCTGCAAGTATTTATGCGATCTATAACATAAAAGAGGCGTGGAAGGTGGAGTTTCAATGGCGGGCTACAGGTTTGGGAAAAAGGATTTTTGGGAAAAAAAGACACCTGGGACATGAATTCACTTTTCTTTGATCTCCAACATTTCTTAAACTTTCAAGCGCCACTCTAAGTGTACCAAGCTGTGTTCCGCAATTAACTAAATTCTTTTTAGGGGAACAAGTTTTGGAAAAAGAGTGTTCAGTATATATGGTCCATAGTAAATAGAATGTGGAGAAAAGAATCTCTTTTTACTTCTCCTTGGATCTTCCACATGCACAAAACTATGCAGAAAGGACTGCGTCGTTTAATTCATTGAAATAGTTGAAATCACTCACGAAGATTTTATTTTATTTTTTTTGATAGATTCATTTTATCCAATTTATCTTTCTAGCACGTTGTCTTTCCTCTATCTGTTCTTGAAGGTGCACCTAGGCTCTCCAATCGGCAATCTCATTCGGGCGAGAGCCTAGACTCCAAGCACACTTAAGCACTCAAACACACTCAGGCTCATTTGTCATTATTATTAATTGCTATTTAGTACCCTTTCTCTCTACTTTCACTCACGGATCTACCAATAAAATTTTCCATCCATCGTTATTTTATTTTCCACCTTATACTTGACCAATGAACGACAGTTTATCTATAATTGTTCATGCTTTATTGATATTGATGCTACGGTGAACGCAGCCATGCATGCCATATTATGTTCTTAAATCTTCTTTTGATTATAAATCTAACTCTCGTATCACCTTCTTTTTTTTACAGGACATGATTGTAGGAGTAGTTACAGGGAACGCCTGTATTTGTGGCAAGTGTTTTTCAGTAGTCCACATGAATGGTGGGATAACAGGAACAAAAAGTCAAATCCAAATGGACCGGACTTCAGTCACAAGAGTACTGGTGAGGCCCTGTGGCTTCGGTCAACAGATCCTCCATGGATCAGAAAACAGCTCAAGTTGCTCGACACCCAAATGAAAAAAAAAGATGGTGACGGTCATTTAGTTTCTGATTCCAGCATGTCCAAATGGTATATATAGCTGAAGATGCTGTGTCTTGTGCTTTCGAACAAAATCTGTTTCCAGATTCCTCTATTTGAGACAGAGTTAGCTTTATTGGTAGAGGTTTAGCCTGTATATATGTAATCTTCATAGAGACAAACCACTAATGCAGAAAGGTCCGATGAAAGCAAATTGGTAGATTGAAGGTACATGTAAGAGGGCATTTGTTGCCCTTTTCTTCTTTTTACTTTTAGTTACTTCTCAAGAAAACCACATATGCTATATATTGTCTATATTATAAATTGGGTTGTGTTTAGTTCTCTTTATCTGAATTATGC AAATAGTCTTAAACCCTAATTTTGCTTTTCTTTCTTTCTTTATTTTTGAAAGAAAAATATAAACCCTAATATTCGCTTGACAGCAGCGAAGCCACTGGGAGCAGCAAACGGACACGTCAGGAAACTGCCGCCAAGTACTTCTTCGAAATTGTCTTAAAACTCTGCCGAGAAAGTTAGACCGGATTGATCACCTTCCCCGGACCTCCACATCGCCGTTCAGTTACTATGAAGGCCGTTCGCCTTCTTTTTTCCCTTAGACCAGTAACTACCTTGCCTTCGCCATCGGTAGCGTTATTCTCTTCGTCTTCATCATTAATCACTAAGTCGATGAACTCCGTCGCCACTGAGGCAAAGAAGCAAGGTTCTGTATACGAACATCAGCCGAAATTTAAGTGGAAGTCTGCTAATTTCTTTGGTACAGTTGAACGGCCCCTTAAAGTGACTACCAGGAACTGTCGCACGGTTAGGGCTTGGACAATTCTTCGTGCCAAAGCCTCTCCAGATTCTAGCAGCAGTTTTAGGATCTTTCTGAAACTGGAGAAAGAGATGGCTGAATCATGGATTGAACGTCTTAAACCCAATGACTACGTCAATGTTGCTGGTCCTTTAGAGTCTTATAAGAAGGTTGGAAAGTACGGGAAGTCTTATTTATCTTACCAGTTAACTGTCTCGGAGTTAAATTGCATTGCACATAATGATCAAGGCTCAAAAAGTCAAAATTCTGTAGGCATGTTACATGAAGAAGGACATGATTGTAGGAGTAGTTACAGGGAACGCCTGTATTTGTGGCAAGTGTTTTTCAGTAGTCCACATGAATGGTGGGATAACAGGAACAAAAAGTCAAATCCAAATGGACCGGACTTCAGTCACAAGAGTACTGGTGAGGCCCTGTGGCTTCGGTCAACAGATCCTCCATGGATCAGAAAACAGCTCAAGTTGCTCGACACCCAAATGAAAAAAAAAGATGGTGACGGTCATTTAGTTTCTGATTCCAGCATGTCCAAATGGTATATATAGCTGAAGATGCTGTGTCTTGTGCTTTCGAACAAAATCTGTTTCCAGATTCCTCTATTTGAGACAGAGTTAGCTTTATTGGTAGAGGTTTAGCCTGTATATATGTAATCTTCATAGAGACAAACCACTAATGCAGAAAGGTCCGATGAAAGCAAATTGGTAGATTGAAGGTACATGTAAGAGGGCATTTGTTGCCCTTTTCTTCTTTTTACTTTTAGTTACTTCTCAAGAAAACCACATATGCTATATATTGTCTATATTATAAATTGGGTTGTGTTTAGTTCTCTTTATCTGAATTATGC ATGAAGGCCGTTCGCCTTCTTTTTTCCCTTAGACCAGTAACTACCTTGCCTTCGCCATCGGTAGCGTTATTCTCTTCGTCTTCATCATTAATCACTAAGTCGATGAACTCCGTCGCCACTGAGGCAAAGAAGCAAGGTTCTGTATACGAACATCAGCCGAAATTTAAGTGGAAGTCTGCTAATTTCTTTGGTACAGTTGAACGGCCCCTTAAAGTGACTACCAGGAACTGTCGCACGGTTAGGGCTTGGACAATTCTTCGTGCCAAAGCCTCTCCAGATTCTAGCAGCAGTTTTAGGATCTTTCTGAAACTGGAGAAAGAGATGGCTGAATCATGGATTGAACGTCTTAAACCCAATGACTACGTCAATGTTGCTGGTCCTTTAGAGTCTTATAAGAAGGTTGGAAAGTACGGGAAGTCTTATTTATCTTACCAGTTAACTGTCTCGGAGTTAAATTGCATTGCACATAATGATCAAGGCTCAAAAAGTCAAAATTCTGTAGGCATGTTACATGAAGAAGGACATGATTGTAGGAGTAGTTACAGGGAACGCCTGTATTTGTGGCAAGTGTTTTTCAGTAGTCCACATGAATGGTGGGATAACAGGAACAAAAAGTCAAATCCAAATGGACCGGACTTCAGTCACAAGAGTACTGGTGAGGCCCTGTGGCTTCGGTCAACAGATCCTCCATGGATCAGAAAACAGCTCAAGTTGCTCGACACCCAAATGAAAAAAAAAGATGGTGACGGTCATTTAGTTTCTGATTCCAGCATGTCCAAATGGTATATATAG MKAVRLLFSLRPVTTLPSPSVALFSSSSSLITKSMNSVATEAKKQGSVYEHQPKFKWKSANFFGTVERPLKVTTRNCRTVRAWTILRAKASPDSSSSFRIFLKLEKEMAESWIERLKPNDYVNVAGPLESYKKVGKYGKSYLSYQLTVSELNCIAHNDQGSKSQNSVGMLHEEGHDCRSSYRERLYLWQVFFSSPHEWWDNRNKKSNPNGPDFSHKSTGEALWLRSTDPPWIRKQLKLLDTQMKKKDGDGHLVSDSSMSKWYI* Homology
BLAST of CSPI02G19510.1 vs. ExPASy Swiss-Prot
Match: Q9SX99 (Protein OSB1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=OSB1 PE=1 SV=1) HSP 1 Score: 137.1 bits (344), Expect = 2.8e-31 Identity = 88/240 (36.67%), Postives = 124/240 (51.67%), Query Frame = 0
BLAST of CSPI02G19510.1 vs. ExPASy Swiss-Prot
Match: Q8GWJ4 (Protein OSB3, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=OSB3 PE=2 SV=1) HSP 1 Score: 66.6 bits (161), Expect = 4.7e-10 Identity = 41/138 (29.71%), Postives = 65/138 (47.10%), Query Frame = 0
BLAST of CSPI02G19510.1 vs. ExPASy Swiss-Prot
Match: Q8GXH3 (Protein OSB2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=OSB2 PE=1 SV=2) HSP 1 Score: 58.9 bits (141), Expect = 9.9e-08 Identity = 24/49 (48.98%), Postives = 30/49 (61.22%), Query Frame = 0
BLAST of CSPI02G19510.1 vs. ExPASy TrEMBL
Match: A0A0A0LNI3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G360660 PE=4 SV=1) HSP 1 Score: 528.1 bits (1359), Expect = 2.1e-146 Identity = 260/263 (98.86%), Postives = 261/263 (99.24%), Query Frame = 0
BLAST of CSPI02G19510.1 vs. ExPASy TrEMBL
Match: A0A5A7VHQ1 (Protein OSB1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G006260 PE=4 SV=1) HSP 1 Score: 458.8 bits (1179), Expect = 1.6e-125 Identity = 226/263 (85.93%), Postives = 239/263 (90.87%), Query Frame = 0
BLAST of CSPI02G19510.1 vs. ExPASy TrEMBL
Match: A0A1S3BBN5 (protein OSB1, mitochondrial-like OS=Cucumis melo OX=3656 GN=LOC103487923 PE=4 SV=1) HSP 1 Score: 458.8 bits (1179), Expect = 1.6e-125 Identity = 226/263 (85.93%), Postives = 239/263 (90.87%), Query Frame = 0
BLAST of CSPI02G19510.1 vs. ExPASy TrEMBL
Match: A0A6J1GJW3 (protein OSB1, mitochondrial-like OS=Cucurbita moschata OX=3662 GN=LOC111454556 PE=4 SV=1) HSP 1 Score: 352.8 bits (904), Expect = 1.2e-93 Identity = 182/264 (68.94%), Postives = 208/264 (78.79%), Query Frame = 0
BLAST of CSPI02G19510.1 vs. ExPASy TrEMBL
Match: A0A6J1KK72 (protein OSB1, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC111496022 PE=4 SV=1) HSP 1 Score: 348.2 bits (892), Expect = 3.0e-92 Identity = 181/264 (68.56%), Postives = 206/264 (78.03%), Query Frame = 0
BLAST of CSPI02G19510.1 vs. NCBI nr
Match: XP_004152725.1 (protein OSB1, mitochondrial [Cucumis sativus] >KGN62549.1 hypothetical protein Csa_022080 [Cucumis sativus]) HSP 1 Score: 528.1 bits (1359), Expect = 4.4e-146 Identity = 260/263 (98.86%), Postives = 261/263 (99.24%), Query Frame = 0
BLAST of CSPI02G19510.1 vs. NCBI nr
Match: XP_008444653.1 (PREDICTED: protein OSB1, mitochondrial-like [Cucumis melo] >KAA0065281.1 protein OSB1 [Cucumis melo var. makuwa]) HSP 1 Score: 458.8 bits (1179), Expect = 3.3e-125 Identity = 226/263 (85.93%), Postives = 239/263 (90.87%), Query Frame = 0
BLAST of CSPI02G19510.1 vs. NCBI nr
Match: XP_038886148.1 (protein OSB1, mitochondrial-like [Benincasa hispida]) HSP 1 Score: 398.3 bits (1022), Expect = 5.2e-107 Identity = 202/261 (77.39%), Postives = 220/261 (84.29%), Query Frame = 0
BLAST of CSPI02G19510.1 vs. NCBI nr
Match: XP_022951824.1 (protein OSB1, mitochondrial-like [Cucurbita moschata]) HSP 1 Score: 352.8 bits (904), Expect = 2.5e-93 Identity = 182/264 (68.94%), Postives = 208/264 (78.79%), Query Frame = 0
BLAST of CSPI02G19510.1 vs. NCBI nr
Match: KAG7020550.1 (Protein OSB1, mitochondrial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 349.4 bits (895), Expect = 2.8e-92 Identity = 181/264 (68.56%), Postives = 206/264 (78.03%), Query Frame = 0
BLAST of CSPI02G19510.1 vs. TAIR 10
Match: AT1G47720.1 (Primosome PriB/single-strand DNA-binding ) HSP 1 Score: 137.1 bits (344), Expect = 2.0e-32 Identity = 88/240 (36.67%), Postives = 124/240 (51.67%), Query Frame = 0
BLAST of CSPI02G19510.1 vs. TAIR 10
Match: AT5G44785.2 (organellar single-stranded DNA binding protein 3 ) HSP 1 Score: 66.6 bits (161), Expect = 3.4e-11 Identity = 41/138 (29.71%), Postives = 65/138 (47.10%), Query Frame = 0
BLAST of CSPI02G19510.1 vs. TAIR 10
Match: AT5G44785.1 (organellar single-stranded DNA binding protein 3 ) HSP 1 Score: 66.6 bits (161), Expect = 3.4e-11 Identity = 41/138 (29.71%), Postives = 65/138 (47.10%), Query Frame = 0
BLAST of CSPI02G19510.1 vs. TAIR 10
Match: AT4G20010.1 (plastid transcriptionally active 9 ) HSP 1 Score: 58.9 bits (141), Expect = 7.0e-09 Identity = 24/49 (48.98%), Postives = 30/49 (61.22%), Query Frame = 0
BLAST of CSPI02G19510.1 vs. TAIR 10
Match: AT4G20010.2 (plastid transcriptionally active 9 ) HSP 1 Score: 58.9 bits (141), Expect = 7.0e-09 Identity = 24/49 (48.98%), Postives = 30/49 (61.22%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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