Bhi10M001888 (mRNA) Wax gourd (B227) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AATCAACTTCCTTTTCTTTTAAAACTCTCTATAAAAGAAACTCCTCAACTTCAACACCTTCTTCACTCAAAAACAAAGCTTCCTTTTTGTCATCACAATAACAAAATCAAACACAAAGCACAAAAAGGTCCTTCCAATGGCTATGCTTCCATGCAAACGCATCCTCGTCGTCCTCATCCTCGTCCTTCTTTGTTGTTTCTCAAACAAAGCTATAGGTAGACTTTTCAATCTAATGTCTTTTCTTTTTCTTCATTTTTATGTTTTAATTAAGTTACTGTTAACCAACATGTTAACTAATTGATTACAGTAAATCATATTGGTTAACCAAAATGTTAACTAATTGATTACAGTAAATCATATGGTTTTTTTTTTCCTTTTTTTCCCTTTAGTTTTTTTTGTGTTAAAAAATTAGGTTATACTCTAACAAATAATATTAACTTGTGGATTATGATAAATTGGATCTTCGAGGTTTCGATATATATATATATATAGACATTCTAATGTAATCCTTAGTAATTTATCCACACTGTCCTAAATAAGATGGAAATTTTCATTCTCTTGTACAATATCTTGAATTGTACATGCATAAGCTAGATGCATATAATTTATTATTTGATAAATTTTGGAAAGTGTGTGCGAAACATAGATACATACAAACATGACAACATATGTTTCTTGAGGCCTATTTTGCAAGTTTAATGGGACTATGGAAGTATCTTTCTTAATATATATATATTTAAGAAGTTAAATTTAACTTTATATAGAGTGGAATTATTTATTTTATAATCTACTTTTGTAAATCCTATTTCAAAAAGAAGGGTTTCTAACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACAAAAGAACAAGAAATTAAAATTGTTGATAAACAAACTTTAATGTTGTCTCGATTTCAAATAATTTGGTTGTTTGTTAGGGTAAGAAATAGAATAACGAAGTGATTTCAAATCTTATTTTTTTTTTTTTATAAAAGAATCTATCTAAAATAGCCGGGTTTTGGGAATTTCATGATATTTAAGGATAAATTACATATTTAATTAACTTTGTCATATTCTAATTTTTAATGATAAAATCATAATAAAAAACCTCTACCAGTAAACTTTTTATCTTTCTTTTATTTTCATATTAATGTTGTTTAAACCCAAAATTTTAAATACATTCATTGTAAAACTTTCTCGTCCAAAATAAAATTAAAAAAAATTAAAATCATATCTTGGATTTCAAATCTGATTTGAAAATCGTTTCTAGTACTTTCTTGATTCGAACAGGGTGACATCAAACAAAACAATATTTAAATTCAAAAAAAAAAAAAAAAACCACATGTACACTTGAATAAGTTTATTGTATACCTAATCATAAAATAAAAACTCATTCTACAAAGATTTTCTTCCTTTGTAAACCTAAATTTTATGTACAAAGTTGGACTGAGATTTCCCTATTGATTTGTGGTTTGCAGCAGCAAGAAGTTTGGGAATACCTCAGCTTAAAAGTGATGTTCATAATCAGAAAGTTATTAATAATGATGATCTTAAAGTTCATGATGAAGAACATTTCTCAAGCACTGATGATTTGGGTGCAATGGATTATACTCCAGCCTCCAAGAAGCCTCCAATCCACAACTAGAATTTTATTTGTAAAAATCCAAACACTTTTACTTCTTTATTATTAATTTGTATGATATTTTACATCTGCCTTTCTCTTTTTGTTTTTGGTTCAAATGAAAGCTTCAAGTAATGAATTATACAGAAATGGAAGATATGAGCAAATTGTGAAACAATGTGGGTTTCATACATGTGCAACTGTTTCAATATTGTCTCTTTTCTTTTTTAATTTTTATTTTGAAGTTAGATTGATTGTCAATAGAAGATTTATGTCGGCA AATCAACTTCCTTTTCTTTTAAAACTCTCTATAAAAGAAACTCCTCAACTTCAACACCTTCTTCACTCAAAAACAAAGCTTCCTTTTTGTCATCACAATAACAAAATCAAACACAAAGCACAAAAAGGTCCTTCCAATGGCTATGCTTCCATGCAAACGCATCCTCGTCGTCCTCATCCTCGTCCTTCTTTGTTGTTTCTCAAACAAAGCTATAGCAGCAAGAAGTTTGGGAATACCTCAGCTTAAAAGTGATGTTCATAATCAGAAAGTTATTAATAATGATGATCTTAAAGTTCATGATGAAGAACATTTCTCAAGCACTGATGATTTGGGTGCAATGGATTATACTCCAGCCTCCAAGAAGCCTCCAATCCACAACTAGAATTTTATTTGTAAAAATCCAAACACTTTTACTTCTTTATTATTAATTTGTATGATATTTTACATCTGCCTTTCTCTTTTTGTTTTTGGTTCAAATGAAAGCTTCAAGTAATGAATTATACAGAAATGGAAGATATGAGCAAATTGTGAAACAATGTGGGTTTCATACATGTGCAACTGTTTCAATATTGTCTCTTTTCTTTTTTAATTTTTATTTTGAAGTTAGATTGATTGTCAATAGAAGATTTATGTCGGCA ATGGCTATGCTTCCATGCAAACGCATCCTCGTCGTCCTCATCCTCGTCCTTCTTTGTTGTTTCTCAAACAAAGCTATAGCAGCAAGAAGTTTGGGAATACCTCAGCTTAAAAGTGATGTTCATAATCAGAAAGTTATTAATAATGATGATCTTAAAGTTCATGATGAAGAACATTTCTCAAGCACTGATGATTTGGGTGCAATGGATTATACTCCAGCCTCCAAGAAGCCTCCAATCCACAACTAG MAMLPCKRILVVLILVLLCCFSNKAIAARSLGIPQLKSDVHNQKVINNDDLKVHDEEHFSSTDDLGAMDYTPASKKPPIHN Homology
BLAST of Bhi10M001888 vs. NCBI nr
Match: KGN62102.1 (hypothetical protein Csa_006036 [Cucumis sativus]) HSP 1 Score: 114.4 bits (285), Expect = 4.6e-22 Identity = 68/88 (77.27%), Postives = 75/88 (85.23%), Query Frame = 0
BLAST of Bhi10M001888 vs. NCBI nr
Match: KAG6571377.1 (hypothetical protein SDJN03_30292, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 110.9 bits (276), Expect = 5.1e-21 Identity = 58/75 (77.33%), Postives = 64/75 (85.33%), Query Frame = 0
BLAST of Bhi10M001888 vs. NCBI nr
Match: KAA0045905.1 (Root meristem growth factor 9 -like protein [Cucumis melo var. makuwa] >TYK13684.1 hypothetical protein E5676_scaffold299G002040 [Cucumis melo var. makuwa]) HSP 1 Score: 105.5 bits (262), Expect = 2.1e-19 Identity = 64/90 (71.11%), Postives = 76/90 (84.44%), Query Frame = 0
BLAST of Bhi10M001888 vs. NCBI nr
Match: KAG6605281.1 (hypothetical protein SDJN03_02598, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 91.7 bits (226), Expect = 3.2e-15 Identity = 55/83 (66.27%), Postives = 63/83 (75.90%), Query Frame = 0
BLAST of Bhi10M001888 vs. NCBI nr
Match: KAB1210353.1 (hypothetical protein CJ030_MR6G024140 [Morella rubra]) HSP 1 Score: 60.5 bits (145), Expect = 7.9e-06 Identity = 38/80 (47.50%), Postives = 52/80 (65.00%), Query Frame = 0
BLAST of Bhi10M001888 vs. ExPASy TrEMBL
Match: A0A0A0LMV6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G297260 PE=4 SV=1) HSP 1 Score: 114.4 bits (285), Expect = 2.2e-22 Identity = 68/88 (77.27%), Postives = 75/88 (85.23%), Query Frame = 0
BLAST of Bhi10M001888 vs. ExPASy TrEMBL
Match: A0A5A7TWX6 (Root meristem growth factor 9-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold299G002040 PE=4 SV=1) HSP 1 Score: 105.5 bits (262), Expect = 1.0e-19 Identity = 64/90 (71.11%), Postives = 76/90 (84.44%), Query Frame = 0
BLAST of Bhi10M001888 vs. ExPASy TrEMBL
Match: A0A6A1VC82 (Uncharacterized protein OS=Morella rubra OX=262757 GN=CJ030_MR6G024140 PE=4 SV=1) HSP 1 Score: 60.5 bits (145), Expect = 3.8e-06 Identity = 38/80 (47.50%), Postives = 52/80 (65.00%), Query Frame = 0
BLAST of Bhi10M001888 vs. ExPASy TrEMBL
Match: A0A2N9HRC3 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS42165 PE=4 SV=1) HSP 1 Score: 59.7 bits (143), Expect = 6.5e-06 Identity = 36/81 (44.44%), Postives = 50/81 (61.73%), Query Frame = 0
BLAST of Bhi10M001888 vs. ExPASy TrEMBL
Match: A0A6J5WGE6 (Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS13997 PE=4 SV=1) HSP 1 Score: 55.8 bits (133), Expect = 9.5e-05 Identity = 38/86 (44.19%), Postives = 52/86 (60.47%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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