Bhi10G001888 (gene) Wax gourd (B227) v1

Overview


Name	Bhi10G001888
Type	gene
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	Root meristem growth factor 9-like protein
Location	chr10: 60080915 .. 60082821 (+)
RNA-Seq Expression	Bhi10G001888
Synteny	Bhi10G001888

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AATCAACTTCCTTTTCTTTTAAAACTCTCTATAAAAGAAACTCCTCAACTTCAACACCTTCTTCACTCAAAAACAAAGCTTCCTTTTTGTCATCACAATAACAAAATCAAACACAAAGCACAAAAAGGTCCTTCCAATGGCTATGCTTCCATGCAAACGCATCCTCGTCGTCCTCATCCTCGTCCTTCTTTGTTGTTTCTCAAACAAAGCTATAGGTAGACTTTTCAATCTAATGTCTTTTCTTTTTCTTCATTTTTATGTTTTAATTAAGTTACTGTTAACCAACATGTTAACTAATTGATTACAGTAAATCATATTGGTTAACCAAAATGTTAACTAATTGATTACAGTAAATCATATGGTTTTTTTTTTCCTTTTTTTCCCTTTAGTTTTTTTTGTGTTAAAAAATTAGGTTATACTCTAACAAATAATATTAACTTGTGGATTATGATAAATTGGATCTTCGAGGTTTCGATATATATATATATATAGACATTCTAATGTAATCCTTAGTAATTTATCCACACTGTCCTAAATAAGATGGAAATTTTCATTCTCTTGTACAATATCTTGAATTGTACATGCATAAGCTAGATGCATATAATTTATTATTTGATAAATTTTGGAAAGTGTGTGCGAAACATAGATACATACAAACATGACAACATATGTTTCTTGAGGCCTATTTTGCAAGTTTAATGGGACTATGGAAGTATCTTTCTTAATATATATATATTTAAGAAGTTAAATTTAACTTTATATAGAGTGGAATTATTTATTTTATAATCTACTTTTGTAAATCCTATTTCAAAAAGAAGGGTTTCTAACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACAAAAGAACAAGAAATTAAAATTGTTGATAAACAAACTTTAATGTTGTCTCGATTTCAAATAATTTGGTTGTTTGTTAGGGTAAGAAATAGAATAACGAAGTGATTTCAAATCTTATTTTTTTTTTTTTATAAAAGAATCTATCTAAAATAGCCGGGTTTTGGGAATTTCATGATATTTAAGGATAAATTACATATTTAATTAACTTTGTCATATTCTAATTTTTAATGATAAAATCATAATAAAAAACCTCTACCAGTAAACTTTTTATCTTTCTTTTATTTTCATATTAATGTTGTTTAAACCCAAAATTTTAAATACATTCATTGTAAAACTTTCTCGTCCAAAATAAAATTAAAAAAAATTAAAATCATATCTTGGATTTCAAATCTGATTTGAAAATCGTTTCTAGTACTTTCTTGATTCGAACAGGGTGACATCAAACAAAACAATATTTAAATTCAAAAAAAAAAAAAAAAACCACATGTACACTTGAATAAGTTTATTGTATACCTAATCATAAAATAAAAACTCATTCTACAAAGATTTTCTTCCTTTGTAAACCTAAATTTTATGTACAAAGTTGGACTGAGATTTCCCTATTGATTTGTGGTTTGCAGCAGCAAGAAGTTTGGGAATACCTCAGCTTAAAAGTGATGTTCATAATCAGAAAGTTATTAATAATGATGATCTTAAAGTTCATGATGAAGAACATTTCTCAAGCACTGATGATTTGGGTGCAATGGATTATACTCCAGCCTCCAAGAAGCCTCCAATCCACAACTAGAATTTTATTTGTAAAAATCCAAACACTTTTACTTCTTTATTATTAATTTGTATGATATTTTACATCTGCCTTTCTCTTTTTGTTTTTGGTTCAAATGAAAGCTTCAAGTAATGAATTATACAGAAATGGAAGATATGAGCAAATTGTGAAACAATGTGGGTTTCATACATGTGCAACTGTTTCAATATTGTCTCTTTTCTTTTTTAATTTTTATTTTGAAGTTAGATTGATTGTCAATAGAAGATTTATGTCGGCA

mRNA sequence

AATCAACTTCCTTTTCTTTTAAAACTCTCTATAAAAGAAACTCCTCAACTTCAACACCTTCTTCACTCAAAAACAAAGCTTCCTTTTTGTCATCACAATAACAAAATCAAACACAAAGCACAAAAAGGTCCTTCCAATGGCTATGCTTCCATGCAAACGCATCCTCGTCGTCCTCATCCTCGTCCTTCTTTGTTGTTTCTCAAACAAAGCTATAGCAGCAAGAAGTTTGGGAATACCTCAGCTTAAAAGTGATGTTCATAATCAGAAAGTTATTAATAATGATGATCTTAAAGTTCATGATGAAGAACATTTCTCAAGCACTGATGATTTGGGTGCAATGGATTATACTCCAGCCTCCAAGAAGCCTCCAATCCACAACTAGAATTTTATTTGTAAAAATCCAAACACTTTTACTTCTTTATTATTAATTTGTATGATATTTTACATCTGCCTTTCTCTTTTTGTTTTTGGTTCAAATGAAAGCTTCAAGTAATGAATTATACAGAAATGGAAGATATGAGCAAATTGTGAAACAATGTGGGTTTCATACATGTGCAACTGTTTCAATATTGTCTCTTTTCTTTTTTAATTTTTATTTTGAAGTTAGATTGATTGTCAATAGAAGATTTATGTCGGCA

Coding sequence (CDS)

ATGGCTATGCTTCCATGCAAACGCATCCTCGTCGTCCTCATCCTCGTCCTTCTTTGTTGTTTCTCAAACAAAGCTATAGCAGCAAGAAGTTTGGGAATACCTCAGCTTAAAAGTGATGTTCATAATCAGAAAGTTATTAATAATGATGATCTTAAAGTTCATGATGAAGAACATTTCTCAAGCACTGATGATTTGGGTGCAATGGATTATACTCCAGCCTCCAAGAAGCCTCCAATCCACAACTAG

Protein sequence

MAMLPCKRILVVLILVLLCCFSNKAIAARSLGIPQLKSDVHNQKVINNDDLKVHDEEHFSSTDDLGAMDYTPASKKPPIHN

Homology

[Close]

BLAST of Bhi10G001888 vs. NCBI nr
Match: KGN62102.1 (hypothetical protein Csa_006036 [Cucumis sativus])

HSP 1 Score: 114.4 bits (285), Expect = 4.6e-22
Identity = 68/88 (77.27%), Postives = 75/88 (85.23%), Query Frame = 0


Query: 1  MAMLPCKRILV--VLILVLLCCFSNKAIAARSLGIPQLKSDVHNQKVIN-NDD-LKVH-- 60
          MAMLPCKRIL   VLILVLLCCFSN AIAARS+G+ ++K++  N+KVIN NDD  KVH  
Sbjct: 1  MAMLPCKRILTLFVLILVLLCCFSNPAIAARSVGVAEMKNESQNEKVINMNDDAYKVHNN 60

Query: 61 DEEH-FSSTDDLGAMDYTPASKKPPIHN 82
          DEEH FSSTDDLGAMDYTPASKKPPIHN
Sbjct: 61 DEEHYFSSTDDLGAMDYTPASKKPPIHN 88

[Close]

BLAST of Bhi10G001888 vs. NCBI nr
Match: KAG6571377.1 (hypothetical protein SDJN03_30292, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 110.9 bits (276), Expect = 5.1e-21
Identity = 58/75 (77.33%), Postives = 64/75 (85.33%), Query Frame = 0


Query: 7  KRILVVLILVLLCCFSNKAIAARSLGIPQLKSDVHNQKVINNDDLKVHDEEHFSSTDDLG 66
          KR+L VL+LVLLC FSNK IA RSLG+PQ+K D H  K+  NDDL VH+EEHFSSTDDLG
Sbjct: 5  KRVL-VLVLVLLCSFSNKVIATRSLGVPQIKKDDH--KLKGNDDLAVHEEEHFSSTDDLG 64

Query: 67 AMDYTPASKKPPIHN 82
          AMDYTPASKKPPIHN
Sbjct: 65 AMDYTPASKKPPIHN 76

[Close]

BLAST of Bhi10G001888 vs. NCBI nr
Match: KAA0045905.1 (Root meristem growth factor 9 -like protein [Cucumis melo var. makuwa] >TYK13684.1 hypothetical protein E5676_scaffold299G002040 [Cucumis melo var. makuwa])

HSP 1 Score: 105.5 bits (262), Expect = 2.1e-19
Identity = 64/90 (71.11%), Postives = 76/90 (84.44%), Query Frame = 0


Query: 1  MAMLPCKRILV--VLILVLLCCFSNKAIAARSLGIPQLKSDV-HNQKVIN-NDDL-KVH- 60
          MAMLPCKRIL+  +LIL+LL CFSN AIAARS+G+ ++K+++   +KVIN NDD+ KVH 
Sbjct: 1  MAMLPCKRILILFLLILILLSCFSNTAIAARSVGVAEMKNEISQREKVININDDVNKVHN 60

Query: 61 --DEEH-FSSTDDLGAMDYTPASKKPPIHN 82
            DEEH FSSTDDLGAMDYTPASKKPPIHN
Sbjct: 61 NNDEEHYFSSTDDLGAMDYTPASKKPPIHN 90

[Close]

BLAST of Bhi10G001888 vs. NCBI nr
Match: KAG6605281.1 (hypothetical protein SDJN03_02598, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 91.7 bits (226), Expect = 3.2e-15
Identity = 55/83 (66.27%), Postives = 63/83 (75.90%), Query Frame = 0


Query: 3  MLPCKRILVVL--ILVLLCCFSNKAIAARSL--GIPQLKSDVHNQKVINNDDLKVHDEEH 62
          M PCKR+++VL  +LVLL CFSN AI ARSL  G+PQ+K D H+ KV  + DL V DEEH
Sbjct: 1  MAPCKRLVLVLLVLLVLLRCFSNTAIEARSLGVGVPQIKKDDHSLKV--DGDLNVDDEEH 60

Query: 63 FSSTDDLGAMDYTPASKKPPIHN 82
          F ST DL AMDYT ASKKPPIHN
Sbjct: 61 FMSTVDLVAMDYTQASKKPPIHN 81

[Close]

BLAST of Bhi10G001888 vs. NCBI nr
Match: KAB1210353.1 (hypothetical protein CJ030_MR6G024140 [Morella rubra])

HSP 1 Score: 60.5 bits (145), Expect = 7.9e-06
Identity = 38/80 (47.50%), Postives = 52/80 (65.00%), Query Frame = 0


Query: 2  AMLPCKRILVVLILVLLCCFSNKAIAARSLGIPQLKSDVHNQKVINNDDLKVHDEEHFSS 61
          A+LPCKR LV++ LV+LC FSN A AARSL    + S+  +Q   + D     ++   + 
Sbjct: 4  AVLPCKR-LVLIALVMLCFFSNAARAARSL--RAVASNEISQMSHDQDPFSPKEDRVLAD 63

Query: 62 TDDLGAMDYTPASKKPPIHN 82
          +DDL  +DYTPA +KPPIHN
Sbjct: 64 SDDLVTVDYTPARRKPPIHN 80

[Close]

BLAST of Bhi10G001888 vs. ExPASy TrEMBL
Match: A0A0A0LMV6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G297260 PE=4 SV=1)

HSP 1 Score: 114.4 bits (285), Expect = 2.2e-22
Identity = 68/88 (77.27%), Postives = 75/88 (85.23%), Query Frame = 0


Query: 1  MAMLPCKRILV--VLILVLLCCFSNKAIAARSLGIPQLKSDVHNQKVIN-NDD-LKVH-- 60
          MAMLPCKRIL   VLILVLLCCFSN AIAARS+G+ ++K++  N+KVIN NDD  KVH  
Sbjct: 1  MAMLPCKRILTLFVLILVLLCCFSNPAIAARSVGVAEMKNESQNEKVINMNDDAYKVHNN 60

Query: 61 DEEH-FSSTDDLGAMDYTPASKKPPIHN 82
          DEEH FSSTDDLGAMDYTPASKKPPIHN
Sbjct: 61 DEEHYFSSTDDLGAMDYTPASKKPPIHN 88

[Close]

BLAST of Bhi10G001888 vs. ExPASy TrEMBL
Match: A0A5A7TWX6 (Root meristem growth factor 9-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold299G002040 PE=4 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 1.0e-19
Identity = 64/90 (71.11%), Postives = 76/90 (84.44%), Query Frame = 0


Query: 1  MAMLPCKRILV--VLILVLLCCFSNKAIAARSLGIPQLKSDV-HNQKVIN-NDDL-KVH- 60
          MAMLPCKRIL+  +LIL+LL CFSN AIAARS+G+ ++K+++   +KVIN NDD+ KVH 
Sbjct: 1  MAMLPCKRILILFLLILILLSCFSNTAIAARSVGVAEMKNEISQREKVININDDVNKVHN 60

Query: 61 --DEEH-FSSTDDLGAMDYTPASKKPPIHN 82
            DEEH FSSTDDLGAMDYTPASKKPPIHN
Sbjct: 61 NNDEEHYFSSTDDLGAMDYTPASKKPPIHN 90

[Close]

BLAST of Bhi10G001888 vs. ExPASy TrEMBL
Match: A0A6A1VC82 (Uncharacterized protein OS=Morella rubra OX=262757 GN=CJ030_MR6G024140 PE=4 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 3.8e-06
Identity = 38/80 (47.50%), Postives = 52/80 (65.00%), Query Frame = 0


Query: 2  AMLPCKRILVVLILVLLCCFSNKAIAARSLGIPQLKSDVHNQKVINNDDLKVHDEEHFSS 61
          A+LPCKR LV++ LV+LC FSN A AARSL    + S+  +Q   + D     ++   + 
Sbjct: 4  AVLPCKR-LVLIALVMLCFFSNAARAARSL--RAVASNEISQMSHDQDPFSPKEDRVLAD 63

Query: 62 TDDLGAMDYTPASKKPPIHN 82
          +DDL  +DYTPA +KPPIHN
Sbjct: 64 SDDLVTVDYTPARRKPPIHN 80

[Close]

BLAST of Bhi10G001888 vs. ExPASy TrEMBL
Match: A0A2N9HRC3 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS42165 PE=4 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 6.5e-06
Identity = 36/81 (44.44%), Postives = 50/81 (61.73%), Query Frame = 0


Query: 1  MAMLPCKRILVVLILVLLCCFSNKAIAARSLGIPQLKSDVHNQKVINNDDLKVHDEEHFS 60
          MA +PCKR L++++L++LC FS  A   R L  P  +S       +N+D+L    EE   
Sbjct: 1  MAAVPCKR-LILVVLIMLCLFSTTAKGGRDLREPSKESQ------MNHDELFPVKEERVL 60

Query: 61 STDDLGAMDYTPASKKPPIHN 82
           +D+L A DYTPA +KPPIHN
Sbjct: 61 ESDELLAADYTPARRKPPIHN 74

[Close]

BLAST of Bhi10G001888 vs. ExPASy TrEMBL
Match: A0A6J5WGE6 (Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS13997 PE=4 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 9.5e-05
Identity = 38/86 (44.19%), Postives = 52/86 (60.47%), Query Frame = 0


Query: 1  MAMLPCKRILVVLILVLLCCFSNKAIAARSLGIPQLKSDVHNQKVIN-NDDLKVHDEEHF 60
          MA +P K +L+V  ++L  CF +     RSLG+    SD  +QK  + +D  K  +E+H 
Sbjct: 1  MAAIPFKHLLLVAFILL--CFISITAEGRSLGVVSKSSDDGHQKSHDLHDPFKQKEEDHE 60

Query: 61 ----SSTDDLGAMDYTPASKKPPIHN 82
                ++DL AMDYTPASKKPPIHN
Sbjct: 61 GLLPDESNDLLAMDYTPASKKPPIHN 84

The following BLAST results are available for this feature:

BLAST of Bhi10G001888 vs.


Match Name	E-value	Identity	Description

BLAST of Bhi10G001888 vs.


Match Name	E-value	Identity	Description

BLAST of Bhi10G001888 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN62102.1	4.6e-22	77.27	hypothetical protein Csa_006036 [Cucumis sativus]	[more]
KAG6571377.1	5.1e-21	77.33	hypothetical protein SDJN03_30292, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAA0045905.1	2.1e-19	71.11	Root meristem growth factor 9 -like protein [Cucumis melo var. makuwa] >TYK13684...	[more]
KAG6605281.1	3.2e-15	66.27	hypothetical protein SDJN03_02598, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAB1210353.1	7.9e-06	47.50	hypothetical protein CJ030_MR6G024140 [Morella rubra]	[more]

BLAST of Bhi10G001888 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LMV6	2.2e-22	77.27	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G297260 PE=4 SV=1	[more]
A0A5A7TWX6	1.0e-19	71.11	Root meristem growth factor 9-like protein OS=Cucumis melo var. makuwa OX=119469...	[more]
A0A6A1VC82	3.8e-06	47.50	Uncharacterized protein OS=Morella rubra OX=262757 GN=CJ030_MR6G024140 PE=4 SV=1	[more]
A0A2N9HRC3	6.5e-06	44.44	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS42165 PE=4 SV=1	[more]
A0A6J5WGE6	9.5e-05	44.19	Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS13997 PE=4 S...	[more]

InterPro

Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 59..81
None	No IPR available	PANTHER	PTHR33743:SF16	ROOT MERISTEM GROWTH FACTOR 9	coord: 1..81
IPR039337	Protein GOLVEN 2	PANTHER	PTHR33743	FAMILY NOT NAMED	coord: 1..81

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi10M001888	Bhi10M001888	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007165	signal transduction
molecular_function	GO:0008083	growth factor activity