Bhi10M001051 (mRNA) Wax gourd (B227) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATTTACTAAAAGAAAGGTCTGAGTTTTAGAATCATTTCGAAAGCGCCCCTTTTGAAAAGATATTTCGAAATCACCCCAACTGTTGCAGAAACCCCTCAGACCAAAAGTAGGGTTTTAGCTTTAACCCTCAGCAGCCAAGAAGCAAGAGTCAGTTCTTGTTTGTCTTCCTTACCAAGAACAACCTTCAGAATCTTTCATTTCTCCTGATAAACAATGGCCTCAATTGGTGCTAGATCTGCTTTTCGGTCATTCTCCGGTTCTGCACGCCGTGCTGCTACTCACATCGGTTCTCAAGCCAGGCCGTCATCAACCTCTCCCTTTCGCATGGCAACTAACAAGCCCCTCTCTCATCGAACTTTCAGGTGCGTTGCTTAATGATTTTGCATCCATTTTAAGTGCAAAAGCTTCTGAATCTAGAGCTCTTTGAGTTTTTTTCCCCTCACCAAAAGGAGATAAACGAAAACGGTGTTCAATCTTCATTTTTATTTCTCTCTTCAGTGTTTTAGTTACGAAATTACGCTCTAAAATTTTGAAATGACAACAAGATAGCCTTTCCCTTTCATCTGATTTAAAATAAAGAGTTTGGCGAAACGTTTCAGTAAATAAGGTAATTTATTTTGCTTGAAGGTGTGCGCCTGTGATGAGCTTCTGTTTGGAGTCGATGATGCCATTTCACTCTGCGTCGTCATCGGCTTTGATGACTTCAATGCTCTCTATCTCGCGCCACAGCTGCGGTTGGCTTCCCGAAGGTGCATAACTGATAATTTAATTCTTTACTTTCTTGATCTGTCATGAGCTAGATCGAAATAGGGAAGGACAATACGATGTATTTGTATAGTTTGGAATTCAAACCATATCCATAATTTCTGAATGAATTCTTCCGTGGACAAGAAAAAGAGTTCATAATTTTCTGGAAGTTGGTTTTCTATTTGCTTTGGTTCTTCGTTGGATGAATTTCAGCTTTATAATTGTTTTTCATGAATCAAGAGAGTAGTGGTTTGAGTGGGGATAATGATCAATTATATGTAGAAATAGTGATATCTATATTTAGGTCGAGGGGTTACATCAGCTCACAGTAATCGGATGTCTTCGGAGGATATATGAGAGTATTCTGTGGTTGAAGTAGTTAATGTCTATGAATCATCGGAAGCTGCCCCATGAAAAGCTCTCTTTTGGGTTAATTTAAGTACTGATATGTATTTTTATGCCAGTATCTTATAATTGTTCATAAGGATTTCCTGTGTACATAAATTTGAATGTATTAGGCTAGTTTTGTGATATCACTGCTTGAGCTTTTATCTTATTAATGAGTCTTTCTGGTTTCTCTGCTTGATATAGAACTTGTAAACATAGAGATACCTGATCCAAGTCCGTAATTTTCTTTATTTTTGTGTTTGAAAGGAGAAGTGGATCTGCTTCTAGGCTGTCTAACTAGTGGATTTTTTACTCTTGAATTAGGTAGCTAGCACACTTTATAGGCCCATTGATGTTCTTCTTGCCTTGTTGCTCTGGTGAGTTGGTGCCTGTAAACTCATTTAGGACTGATAAAATTGAACGGAATTGTATAACTAATAACATGCATGCACAACAACTGGATCATTTTCCCCCTAGTAGAAAATTAATTACATCAAGTAGATACTCCTCAAATTAGGAGTCAAACAAGCTTAACAGACAATAATGATTCATTGTCTCATTCCTCCACCTTCCATGACCGTCCATTGATCAGAGTTGAAGTCCTTCTGCTGAACTTGGTTGTTATAAATCTTATTATTTTATATGTTACTAGAATGAGTCATTTATGCGAAAACCTTCCATTTTTTATTCAAATTATTAATTAAAAAAGTACATTCCCCTCTTTTCAATGTAGGCAAAGACAAGACTAGATGAGGATCGAGAAGCAGGAAGGAATGACTTGATTTGTTTTTTTGAATTTTCCCTTTTAAGTCCTAGAGATGTCACCCCCCGGCCCACCCCCAAGACAAAGAAAAGAAAGAGAAAAAAAAAGTACATCTAGGAGATGCCATCAATAGGTTAAATGAGATGTTGTATTTGGAATGAAATAATAAACTATGATGTCCTATTTCGTTCACTTTGTTTGTAGATGATTGTTTTTAGAGTGTTGAAAGATTATATATTCAATTTAATTCTGCAACTATATTGGATTACGGATTACTAGATCGTTGCAGAATAAATTTGGCTTCTACATAGTTTAATTATTGTTTTGCGAAGTTTACTTTGTTTATCAAGTAAATGGGACTGTTGATTTGTTGTTATCTTTTCAATTCCACTACTTCATAAAGATGGAAGTTGCAAATTCAACAATATATTACTCTGACCATAAGTAGCATGGAAAGGAGTTTGAAGTAGTCCGATGAAAAATTGAAGTCTTCTTTTTGAATGATACATTGAAATATCCTTTGGAAAAATGCTTCCAACTAGAATGAATGTTTTGTAGTTTCCATGACCCAAAATCAGGTCCTCAATTTCCACCTTTTAAGTTTAAACTTGGAAAATGTCAATCTACATATCTCTTTGATGAGCATGCTCATCACCTCCCAACTTGTTTCTTTTGATTGGAATATCAAACTGACATTAATAACACACTGGTCACTTGTGTTCATCAGCATGCAATGATGATCTGTGATAAAAAAAGGATCCGACGAAGTTCTGTATCCAATCCTCTATACGGACAGTGACTTCTATTAAGTAGAGGTTTCCGAGCTCCAAATGGTGGTTTGTGAAGAAGAGCTTCTTATCAATGGCAACGGTTTATCGTTTTGAAGACTGAATTAATTTTTAGTGCTCAAAATGTTCATCATATACTTGATTCTCTATGTAGTACTCATTGATGGTTAACATTTGTATGTGATCTATGATCATGCTAACTTCTTCATCGAATGTTCATTGAGCAATTGAAAGCTTCGTTTTCTTGCTGGAAAAGTGGGTTTGTGTTTTGTAGAAGCTTCGACAAAAGTGACTTGAAATCTGTGCTAGTGATGCATGGTTGAATAGGAGAGTCTTGAATCTTTGAAAATTTTCAAACCAAACACCGCACTTTTTCTATTGCCTCCTCTTTGATCATTAGCCATCTTTGCTTTTCAGTTGAGACCTCGGGTTTATTGTGAAACTTGCCTATACAATTTTCCAGTTCTTGCTGTCTGACTGCCTCTTGTTTTGTTTTCTAGGGCGGTGATATTCAATCAACGTGTATAGCATGAAGGTTTGCAACAATGTTGAATTTGCCATTTTCATTGCTCGTCTGTATTTCAAGTCCAGATTCATATACTATTTTTGCCTAGATTTTCAAAATTTGGTTTCCTAGCTTTTCATTGGACGATTCAATATAGACCATTTGAAATACACCCTACTTCAATTTTTTTCCTTCTGTTAGCTAGTATTTGAATTGTCGGTACAGTAACCAAATTCACAATCTACATTTGAGAACAATGTCCAGTTAGTGATTTCATAAGTTTACAGCATTTGAC ATTTACTAAAAGAAAGGTCTGAGTTTTAGAATCATTTCGAAAGCGCCCCTTTTGAAAAGATATTTCGAAATCACCCCAACTGTTGCAGAAACCCCTCAGACCAAAAGTAGGGTTTTAGCTTTAACCCTCAGCAGCCAAGAAGCAAGAGTCAGTTCTTGTTTGTCTTCCTTACCAAGAACAACCTTCAGAATCTTTCATTTCTCCTGATAAACAATGGCCTCAATTGGTGCTAGATCTGCTTTTCGGTCATTCTCCGGTTCTGCACGCCGTGCTGCTACTCACATCGGTTCTCAAGCCAGGCCGTCATCAACCTCTCCCTTTCGCATGGCAACTAACAAGCCCCTCTCTCATCGAACTTTCAGGTGTGCGCCTGTGATGAGCTTCTGTTTGGAGTCGATGATGCCATTTCACTCTGCGTCGTCATCGGCTTTGATGACTTCAATGCTCTCTATCTCGCGCCACAGCTGCGGTTGGCTTCCCGAAGGTAGCTAGCACACTTTATAGGCCCATTGATGTTCTTCTTGCCTTGTTGCTCTGGCAAAGACAAGACTAGATGAGGATCGAGAAGCAGGAAGGAATGACTTGATTTGTTTTTTTGAATTTTCCCTTTTAAGTCCTAGAGATGTCACCCCCCGGCCCACCCCCAAGACAAAGAAAAGAAAGAGAAAAAAAAAGTACATCTAGGAGATGCCATCAATAGGTTAAATGAGATGTTGTATTTGGAATGAAATAATAAACTATGATGTCCTATTTCGTTCACTTTGTTTGTAGATGATTGTTTTTAGAGTGTTGAAAGATTATATATTCAATTTAATTCTGCAACTATATTGGATTACGGATTACTAGATCGTTGCAGAATAAATTTGGCTTCTACATAGTTTAATTATTGTTTTGCGAAGTTTACTTTGTTTATCAAGTAAATGGGACTGTTGATTTGTTGTTATCTTTTCAATTCCACTACTTCATAAAGATGGAAGTTGCAAATTCAACAATATATTACTCTGACCATAAGTAGCATGGAAAGGAGTTTGAAGTAGTCCGATGAAAAATTGAAGTCTTCTTTTTGAATGATACATTGAAATATCCTTTGGAAAAATGCTTCCAACTAGAATGAATGTTTTGTAGTTTCCATGACCCAAAATCAGGTCCTCAATTTCCACCTTTTAAGTTTAAACTTGGAAAATGTCAATCTACATATCTCTTTGATGAGCATGCTCATCACCTCCCAACTTGTTTCTTTTGATTGGAATATCAAACTGACATTAATAACACACTGGTCACTTGTGTTCATCAGCATGCAATGATGATCTGTGATAAAAAAAGGATCCGACGAAGTTCTGTATCCAATCCTCTATACGGACAGTGACTTCTATTAAGTAGAGGTTTCCGAGCTCCAAATGGTGGTTTGTGAAGAAGAGCTTCTTATCAATGGCAACGGTTTATCGTTTTGAAGACTGAATTAATTTTTAGTGCTCAAAATGTTCATCATATACTTGATTCTCTATGTAGTACTCATTGATGGTTAACATTTGTATGTGATCTATGATCATGCTAACTTCTTCATCGAATGTTCATTGAGCAATTGAAAGCTTCGTTTTCTTGCTGGAAAAGTGGGTTTGTGTTTTGTAGAAGCTTCGACAAAAGTGACTTGAAATCTGTGCTAGTGATGCATGGTTGAATAGGAGAGTCTTGAATCTTTGAAAATTTTCAAACCAAACACCGCACTTTTTCTATTGCCTCCTCTTTGATCATTAGCCATCTTTGCTTTTCAGTTGAGACCTCGGGTTTATTGTGAAACTTGCCTATACAATTTTCCAGTTCTTGCTGTCTGACTGCCTCTTGTTTTGTTTTCTAGGGCGGTGATATTCAATCAACGTGTATAGCATGAAGGTTTGCAACAATGTTGAATTTGCCATTTTCATTGCTCGTCTGTATTTCAAGTCCAGATTCATATACTATTTTTGCCTAGATTTTCAAAATTTGGTTTCCTAGCTTTTCATTGGACGATTCAATATAGACCATTTGAAATACACCCTACTTCAATTTTTTTCCTTCTGTTAGCTAGTATTTGAATTGTCGGTACAGTAACCAAATTCACAATCTACATTTGAGAACAATGTCCAGTTAGTGATTTCATAAGTTTACAGCATTTGAC ATGGCCTCAATTGGTGCTAGATCTGCTTTTCGGTCATTCTCCGGTTCTGCACGCCGTGCTGCTACTCACATCGGTTCTCAAGCCAGGCCGTCATCAACCTCTCCCTTTCGCATGGCAACTAACAAGCCCCTCTCTCATCGAACTTTCAGGTGTGCGCCTGTGATGAGCTTCTGTTTGGAGTCGATGATGCCATTTCACTCTGCGTCGTCATCGGCTTTGATGACTTCAATGCTCTCTATCTCGCGCCACAGCTGCGGTTGGCTTCCCGAAGGTAGCTAG MASIGARSAFRSFSGSARRAATHIGSQARPSSTSPFRMATNKPLSHRTFRCAPVMSFCLESMMPFHSASSSALMTSMLSISRHSCGWLPEGS Homology
BLAST of Bhi10M001051 vs. TAIR 10
Match: AT1G28395.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G33847.2); Has 89 Blast hits to 89 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 89; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 61.6 bits (148), Expect = 3.8e-10 Identity = 37/89 (41.57%), Postives = 56/89 (62.92%), Query Frame = 0
BLAST of Bhi10M001051 vs. TAIR 10
Match: AT1G28395.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G33847.2); Has 89 Blast hits to 89 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 89; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 61.6 bits (148), Expect = 3.8e-10 Identity = 37/89 (41.57%), Postives = 56/89 (62.92%), Query Frame = 0
BLAST of Bhi10M001051 vs. TAIR 10
Match: AT1G28395.3 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G33847.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 61.6 bits (148), Expect = 3.8e-10 Identity = 37/89 (41.57%), Postives = 56/89 (62.92%), Query Frame = 0
BLAST of Bhi10M001051 vs. TAIR 10
Match: AT2G33847.2 (unknown protein; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G28395.3); Has 71 Blast hits to 71 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 71; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 60.1 bits (144), Expect = 1.1e-09 Identity = 38/87 (43.68%), Postives = 53/87 (60.92%), Query Frame = 0
BLAST of Bhi10M001051 vs. TAIR 10
Match: AT1G28395.4 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G33847.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 58.9 bits (141), Expect = 2.4e-09 Identity = 36/86 (41.86%), Postives = 54/86 (62.79%), Query Frame = 0
BLAST of Bhi10M001051 vs. ExPASy Swiss-Prot
Match: Q93ZJ3 (Protein NUCLEAR FUSION DEFECTIVE 6, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=NFD6 PE=3 SV=1) HSP 1 Score: 52.8 bits (125), Expect = 2.5e-06 Identity = 37/88 (42.05%), Postives = 52/88 (59.09%), Query Frame = 0
BLAST of Bhi10M001051 vs. NCBI nr
Match: XP_038901103.1 (protein NUCLEAR FUSION DEFECTIVE 6, mitochondrial-like isoform X1 [Benincasa hispida]) HSP 1 Score: 175.6 bits (444), Expect = 1.9e-40 Identity = 91/91 (100.00%), Postives = 91/91 (100.00%), Query Frame = 0
BLAST of Bhi10M001051 vs. NCBI nr
Match: XP_038901106.1 (protein NUCLEAR FUSION DEFECTIVE 6, mitochondrial-like isoform X3 [Benincasa hispida]) HSP 1 Score: 175.6 bits (444), Expect = 1.9e-40 Identity = 91/91 (100.00%), Postives = 91/91 (100.00%), Query Frame = 0
BLAST of Bhi10M001051 vs. NCBI nr
Match: XP_038901105.1 (protein NUCLEAR FUSION DEFECTIVE 6, mitochondrial-like isoform X2 [Benincasa hispida]) HSP 1 Score: 173.3 bits (438), Expect = 9.5e-40 Identity = 90/90 (100.00%), Postives = 90/90 (100.00%), Query Frame = 0
BLAST of Bhi10M001051 vs. NCBI nr
Match: XP_016901879.1 (PREDICTED: protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X1 [Cucumis melo]) HSP 1 Score: 166.4 bits (420), Expect = 1.2e-37 Identity = 86/91 (94.51%), Postives = 87/91 (95.60%), Query Frame = 0
BLAST of Bhi10M001051 vs. NCBI nr
Match: XP_016901881.1 (PREDICTED: protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X3 [Cucumis melo]) HSP 1 Score: 166.4 bits (420), Expect = 1.2e-37 Identity = 86/91 (94.51%), Postives = 87/91 (95.60%), Query Frame = 0
BLAST of Bhi10M001051 vs. ExPASy TrEMBL
Match: A0A5D3BHH0 (Protein NUCLEAR FUSION DEFECTIVE 6 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold469G00120 PE=4 SV=1) HSP 1 Score: 166.4 bits (420), Expect = 5.6e-38 Identity = 86/91 (94.51%), Postives = 87/91 (95.60%), Query Frame = 0
BLAST of Bhi10M001051 vs. ExPASy TrEMBL
Match: A0A1S4E0Y3 (protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103496017 PE=4 SV=1) HSP 1 Score: 166.4 bits (420), Expect = 5.6e-38 Identity = 86/91 (94.51%), Postives = 87/91 (95.60%), Query Frame = 0
BLAST of Bhi10M001051 vs. ExPASy TrEMBL
Match: A0A1S4E0X5 (protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X3 OS=Cucumis melo OX=3656 GN=LOC103496017 PE=4 SV=1) HSP 1 Score: 166.4 bits (420), Expect = 5.6e-38 Identity = 86/91 (94.51%), Postives = 87/91 (95.60%), Query Frame = 0
BLAST of Bhi10M001051 vs. ExPASy TrEMBL
Match: A0A5A7UDF2 (Protein NUCLEAR FUSION DEFECTIVE 6 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold469G00200 PE=4 SV=1) HSP 1 Score: 164.9 bits (416), Expect = 1.6e-37 Identity = 85/92 (92.39%), Postives = 87/92 (94.57%), Query Frame = 0
BLAST of Bhi10M001051 vs. ExPASy TrEMBL
Match: A0A1S4E0U8 (protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC107991430 PE=4 SV=1) HSP 1 Score: 164.5 bits (415), Expect = 2.1e-37 Identity = 85/91 (93.41%), Postives = 86/91 (94.51%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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