Bhi09M002998 (mRNA) Wax gourd (B227) v1

Overview
NameBhi09M002998
TypemRNA
OrganismBenincasa hispida (Wax gourd (B227) v1)
DescriptionDUF4283 domain-containing protein
Locationchr9: 91709853 .. 91710368 (+)
Sequence length516
RNA-Seq ExpressionBhi09M002998
SyntenyBhi09M002998
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTTGAAAGATGGTCCTCCCAGCTTCACGTGAGCCCGAAACTAGTCCCCAGGTTACCATTGCATGCCTGGAATTTGACAACCTTTAGACAAATCGGAGAGACATGTGGTGGGTTTAGAGATGTTGGCAAATACACATGGAGAAAACTCAACCTTATGGAAGCAAACATACGTGTAAAAGATAAATATTGTGGCTTTGTTCCTGAATCTATAAACATCATTTATGAAGAAGGAAAAGTATATACGATTCACACAGTCACTCCGATTTATGGAAAATGGCTCACCGAAAAACATCCAAAAGTTTATGGCACGTTTACTCGAGAGGCTGCTGTCAACTTTAATGCATCAGACCCTATGTCAGACTACTTCTTCGAAGGTACTTCTGCTATCCCACCAACCGAAGCTTCATTCCATAGGCCTAATGAAAAGTCGTGTCATTGGAAAGAAGAGAGAGATCGAAAAGGCAAAAGAGAAAGTAGAAGCCGAGGAGATGGAAACTGCCACACAAGAGACTAG

mRNA sequence

ATGTTTGAAAGATGGTCCTCCCAGCTTCACGTGAGCCCGAAACTAGTCCCCAGGTTACCATTGCATGCCTGGAATTTGACAACCTTTAGACAAATCGGAGAGACATGTGGTGGGTTTAGAGATGTTGGCAAATACACATGGAGAAAACTCAACCTTATGGAAGCAAACATACGTGTAAAAGATAAATATTGTGGCTTTGTTCCTGAATCTATAAACATCATTTATGAAGAAGGAAAAGTATATACGATTCACACAGTCACTCCGATTTATGGAAAATGGCTCACCGAAAAACATCCAAAAGTTTATGGCACGTTTACTCGAGAGGCTGCTGTCAACTTTAATGCATCAGACCCTATGTCAGACTACTTCTTCGAAGGTACTTCTGCTATCCCACCAACCGAAGCTTCATTCCATAGGCCTAATGAAAAGTCGTGTCATTGGAAAGAAGAGAGAGATCGAAAAGGCAAAAGAGAAAGTAGAAGCCGAGGAGATGGAAACTGCCACACAAGAGACTAG

Coding sequence (CDS)

ATGTTTGAAAGATGGTCCTCCCAGCTTCACGTGAGCCCGAAACTAGTCCCCAGGTTACCATTGCATGCCTGGAATTTGACAACCTTTAGACAAATCGGAGAGACATGTGGTGGGTTTAGAGATGTTGGCAAATACACATGGAGAAAACTCAACCTTATGGAAGCAAACATACGTGTAAAAGATAAATATTGTGGCTTTGTTCCTGAATCTATAAACATCATTTATGAAGAAGGAAAAGTATATACGATTCACACAGTCACTCCGATTTATGGAAAATGGCTCACCGAAAAACATCCAAAAGTTTATGGCACGTTTACTCGAGAGGCTGCTGTCAACTTTAATGCATCAGACCCTATGTCAGACTACTTCTTCGAAGGTACTTCTGCTATCCCACCAACCGAAGCTTCATTCCATAGGCCTAATGAAAAGTCGTGTCATTGGAAAGAAGAGAGAGATCGAAAAGGCAAAAGAGAAAGTAGAAGCCGAGGAGATGGAAACTGCCACACAAGAGACTAG

Protein sequence

MFERWSSQLHVSPKLVPRLPLHAWNLTTFRQIGETCGGFRDVGKYTWRKLNLMEANIRVKDKYCGFVPESINIIYEEGKVYTIHTVTPIYGKWLTEKHPKVYGTFTREAAVNFNASDPMSDYFFEGTSAIPPTEASFHRPNEKSCHWKEERDRKGKRESRSRGDGNCHTRD
Homology
BLAST of Bhi09M002998 vs. ExPASy TrEMBL
Match: E5GB30 (DUF4283 domain-containing protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 134.8 bits (338), Expect = 3.4e-28
Identity = 67/144 (46.53%), Postives = 89/144 (61.81%), Query Frame = 0

Query: 2   FERWSSQLHVSPKLVP---------RLPLHAWNLTTFRQIGETCGGFRDVGKYTWRKLNL 61
           FE W+ + H SPK VP          +PLHAWNL +F QIG+ CGGF +V K T    +L
Sbjct: 197 FEEWNQKDHASPKFVPSYGGWIKVRAVPLHAWNLESFVQIGDACGGFMEVAKETRELTDL 256

Query: 62  MEANIRVKDKYCGFVPESINIIYEEGKVYTIHTVTPIYGKWLTEKHPKVYGTFTREAAVN 121
           +EA+IRVKD Y GF+P  I +I +E + Y I  +    GKW   ++P ++GTFTREAA  
Sbjct: 257 IEASIRVKDNYSGFIPAFIKLIDKEERSYIIQVIVKTEGKWHLGRNPSIHGTFTREAARR 316

Query: 122 FNASDPMSD-YFFEGTSAIPPTEA 136
           F+  +  S+ YFFEG  AI P +A
Sbjct: 317 FDEFNLNSEQYFFEGNLAISPEKA 340

BLAST of Bhi09M002998 vs. ExPASy TrEMBL
Match: A0A5D3DJE1 (DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold500G001100 PE=4 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 9.8e-28
Identity = 66/153 (43.14%), Postives = 93/153 (60.78%), Query Frame = 0

Query: 2   FERWSSQLHVSPKLVPR---------LPLHAWNLTTFRQIGETCGGFRDVGKYTWRKLNL 61
           FE+WSS  H +PKL+P          +PLH WN+TTF+QIG+ CGG   V + T    NL
Sbjct: 269 FEKWSSAYHATPKLIPSYGGWTTFRGIPLHLWNMTTFQQIGKACGGLIKVAEETKSAKNL 328

Query: 62  MEANIRVKDKYCGFVPESINIIYEEGKVYTIHTVTPIYGKWLTEKHPKVYGTFTREAAVN 121
           +EA I+V+  Y GF+P ++ I   EG  ++I  VT   GKWL E++ +++GTF R+AA  
Sbjct: 329 IEARIKVRYNYSGFLPANVRIFDNEGNKFSIQVVTHPEGKWLIERNVRLHGTFKRQAAAT 388

Query: 122 FNASDPMSD-YFFEGTSAIPPTEASFHRPNEKS 145
           F+  +P S+ +FFEG  AI P   S    + KS
Sbjct: 389 FDDFNPESEQFFFEGMEAISPDFLSTSSDDRKS 421

BLAST of Bhi09M002998 vs. ExPASy TrEMBL
Match: A0A5A7TLE2 (DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold46G00570 PE=4 SV=1)

HSP 1 Score: 131.0 bits (328), Expect = 4.9e-27
Identity = 63/144 (43.75%), Postives = 88/144 (61.11%), Query Frame = 0

Query: 2   FERWSSQLHVSPKLVPR---------LPLHAWNLTTFRQIGETCGGFRDVGKYTWRKLNL 61
           FE W+ + H SPK++P          +PLHAWNL +F QIG+ CGGF +V K T    +L
Sbjct: 204 FEEWNQKAHASPKVIPSYGGWIKVRGVPLHAWNLESFIQIGDACGGFMEVAKETRELTDL 263

Query: 62  MEANIRVKDKYCGFVPESINIIYEEGKVYTIHTVTPIYGKWLTEKHPKVYGTFTREAAVN 121
           +EA+IRVKD Y GF+P  I +  +E + +    +    GKW  E++P ++GTFTREAA  
Sbjct: 264 IEASIRVKDNYSGFIPAFIKLFDKEERSFITQVIVKTKGKWHLERNPSIHGTFTREAARR 323

Query: 122 FNASDPMSD-YFFEGTSAIPPTEA 136
           F+  +  S+ YFFE   AI P +A
Sbjct: 324 FDEFNLNSEQYFFEDNLAISPEKA 347

BLAST of Bhi09M002998 vs. ExPASy TrEMBL
Match: A0A5D3BSE0 (DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold808G00040 PE=4 SV=1)

HSP 1 Score: 130.2 bits (326), Expect = 8.3e-27
Identity = 64/153 (41.83%), Postives = 91/153 (59.48%), Query Frame = 0

Query: 2   FERWSSQLHVSPKLVPR---------LPLHAWNLTTFRQIGETCGGFRDVGKYTWRKLNL 61
           FE+WSS  H +PKL+P          +PLH WN+TTF+QIG+ CGG   V + T    NL
Sbjct: 271 FEKWSSAYHATPKLIPSYGGWTTFRGIPLHLWNMTTFQQIGKACGGLIKVAEETRSAKNL 330

Query: 62  MEANIRVKDKYCGFVPESINIIYEEGKVYTIHTVTPIYGKWLTEKHPKVYGTFTREAAVN 121
           +EA I+V+  Y  F+P ++ I   EG  +++  VT   GKWL E++ +++GTF R+AA  
Sbjct: 331 IEARIKVRYNYSAFLPANVRIFDNEGNKFSVQVVTHPEGKWLIERNVRLHGTFKRQAAAT 390

Query: 122 FNASDPMSD-YFFEGTSAIPPTEASFHRPNEKS 145
           F+  +P S+ +FFEG  AI P   S      KS
Sbjct: 391 FDDFNPESEQFFFEGMEAISPDFLSTSSDGRKS 423

BLAST of Bhi09M002998 vs. ExPASy TrEMBL
Match: A0A5D3DKV0 (DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold205G00050 PE=4 SV=1)

HSP 1 Score: 130.2 bits (326), Expect = 8.3e-27
Identity = 64/153 (41.83%), Postives = 92/153 (60.13%), Query Frame = 0

Query: 2   FERWSSQLHVSPKLVPR---------LPLHAWNLTTFRQIGETCGGFRDVGKYTWRKLNL 61
           FE+WSS  H +PKL+P          +PLH WN+TTF+Q+G+ CGG   V + T    NL
Sbjct: 269 FEKWSSAYHATPKLIPSYGGWTTFRGIPLHLWNMTTFQQLGKACGGLIKVAEETRSAKNL 328

Query: 62  MEANIRVKDKYCGFVPESINIIYEEGKVYTIHTVTPIYGKWLTEKHPKVYGTFTREAAVN 121
           ++A I+V+  Y GF+P ++ I   EG  ++I  VT   GKWL E++ +++GTF R+AA  
Sbjct: 329 VKARIKVRYNYSGFLPANVRIFDNEGNKFSIQVVTHPEGKWLIERNVRLHGTFKRQAAAA 388

Query: 122 FNASDPMSD-YFFEGTSAIPPTEASFHRPNEKS 145
           F+  +P S+ +FFEG  AI P   S      KS
Sbjct: 389 FDEFNPESEQFFFEGMEAISPDFLSTSSDGRKS 421

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
E5GB303.4e-2846.53DUF4283 domain-containing protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=... [more]
A0A5D3DJE19.8e-2843.14DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567... [more]
A0A5A7TLE24.9e-2743.75DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2... [more]
A0A5D3BSE08.3e-2741.83DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567... [more]
A0A5D3DKV08.3e-2741.83DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567... [more]
InterPro
Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 139..171
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 133..171

Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Bhi09G002998Bhi09G002998gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Bhi09M002998.exon1Bhi09M002998.exon1exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
cds.Bhi09M002998cds.Bhi09M002998CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Bhi09M002998Bhi09M002998-proteinpolypeptide