Bhi07M000880 (mRNA) Wax gourd (B227) v1

Overview


Name	Bhi07M000880
Type	mRNA
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	Unknown protein
Location	chr7: 33826160 .. 33826699 (+)
Sequence length	369
RNA-Seq Expression	Bhi07M000880
Synteny	Bhi07M000880

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGGGTTAAACAAACTTTATCCTACCCAATGGCGACAATAAAGTCAGTTGGAAAGGTTTTTTCTTTCTTCTCAATGTTCCACAAACACAACCCATCGTTAAGCAATAGACAAACGTTATATCCACATCTTTATCTTACAAAGATGCCCAACAAAAGCACAAGAAGCCTTGTGAACCACAACCAAAAGCACCCTTTTGTTTGATAGATAACACTCCACCCTCTTCTTCTCCTCCTCTATCTAGCGAGCTTGCAGCCTTTTACCCTGATACAACCATCATCATCAACGGGCAAAATTTCCAAGACGATTGGTTTGAAAGTCTTAGGACTTTACCAAGGGAAGTGTCTGACATTGGCTCCATTATCCCTCTACAACCCAACAAGGCCATCTTAGCGGTTGAAAATAAGGAACAAGGTTTGGTTTTAAGCAATATCTGTGATTGGTATAAGGTTGGCTCTTTCATGGTGAAATTCGAATCATAGAGCATTGAGGCGTACTACAAAGATCAGAAAGTGTCTTCTTATGAAGGATGGATTAAA

mRNA sequence

ATGGAGGATGCCCAACAAAAGCACAAGAAGCCTTGTGAACCACAACCAAAAGCACCCTTTTGTTTGATAGATAACACTCCACCCTCTTCTTCTCCTCCTCTATCTAGCGAGCTTGCAGCCTTTTACCCTGATACAACCATCATCATCAACGGGCAAAATTTCCAAGACGATTGGTTTGAAAGTCTTAGGACTTTACCAAGGGAAGTGTCTGACATTGGCTCCATTATCCCTCTACAACCCAACAAGGCCATCTTAGCGGTTGAAAATAAGGAACAAGGTTTGGTTTTAAGCAATATCTGTGATTGGTATAAGAGCATTGAGGCGTACTACAAAGATCAGAAAGTGTCTTCTTATGAAGGATGGATTAAA

Coding sequence (CDS)

ATGGAGGATGCCCAACAAAAGCACAAGAAGCCTTGTGAACCACAACCAAAAGCACCCTTTTGTTTGATAGATAACACTCCACCCTCTTCTTCTCCTCCTCTATCTAGCGAGCTTGCAGCCTTTTACCCTGATACAACCATCATCATCAACGGGCAAAATTTCCAAGACGATTGGTTTGAAAGTCTTAGGACTTTACCAAGGGAAGTGTCTGACATTGGCTCCATTATCCCTCTACAACCCAACAAGGCCATCTTAGCGGTTGAAAATAAGGAACAAGGTTTGGTTTTAAGCAATATCTGTGATTGGTATAAGAGCATTGAGGCGTACTACAAAGATCAGAAAGTGTCTTCTTATGAAGGATGGATTAAA

Protein sequence

MEDAQQKHKKPCEPQPKAPFCLIDNTPPSSSPPLSSELAAFYPDTTIIINGQNFQDDWFESLRTLPREVSDIGSIIPLQPNKAILAVENKEQGLVLSNICDWYKSIEAYYKDQKVSSYEGWIK

Homology

The following BLAST results are available for this feature:

BLAST of Bhi07M000880 vs.


Match Name	E-value	Identity	Description

BLAST of Bhi07M000880 vs.


Match Name	E-value	Identity	Description

BLAST of Bhi07M000880 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..35

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Bhi07G000880	Bhi07G000880	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Bhi07M000880.exon1	Bhi07M000880.exon1	exon
Bhi07M000880.exon2	Bhi07M000880.exon2	exon
Bhi07M000880.exon3	Bhi07M000880.exon3	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
cds.Bhi07M000880	cds.Bhi07M000880	CDS
cds.Bhi07M000880	cds.Bhi07M000880_2	CDS
cds.Bhi07M000880	cds.Bhi07M000880_3	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Bhi07M000880	Bhi07M000880-protein	polypeptide